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Intrinsic And Environmental Drivers Of Pairwise Cohesion In Wild Canis Social Groups, John F. Benson

School of Natural Resources: Faculty Publications

Animals within social groups respond to costs and benefits of sociality by adjusting the proportion of time they spend in close proximity to other individuals in the group (cohesion). Variation in cohesion between individuals, in turn, shapes important group-level processes such as subgroup formation and fission–fusion dynamics. Although critical to animal sociality, a comprehensive understanding of the factors influencing cohesion remains a gap in our knowledge of cooperative behavior in animals. We tracked 574 individuals from six species within the genus Canis in 15 countries on four continents with GPS telemetry to estimate the time that pairs of individuals within …

A New Invasive Lepidosaphes Armored Scale (Hemiptera: Coccomorpha: Diaspididae) For Florida: First Records, Natural Enemies, And An Identification Key, Erin C. Powell, Mark Zenoble, Douglass R. Miller, Benjamin B. Normark, Gregory A. Evans

Insecta Mundi

The invasive armored scale, Lepidosaphes laterochitinosa Green 1925 (Hemiptera: Coccomorpha: Diaspididae), was found in the Florida landscape for the first time in November 2022 and is now known from two south Florida counties: Broward and Miami-Dade. In Florida thus far, this polyphagous species has been found on Epipremnum pinnatum (L.) Engl. (Araceae), Dracaena Vand. ex. L. (Asparagaceae), and Breynia disticha J. R. Forst. and G. Forst. (Phyllanthaceae), all common landscape ornamentals. New parasitoid host records are provided for Encarsia lounsburyi (Berlese and Paoli), Encarsia citrina (Craw), and Aphytis lingnanensis Compere (Hymenoptera: Aphelinidae) that emerged from L. laterochitinosa in Broward …

The Prognostic Significance Of Androgen Receptor Expression In Gliomas, Chi Zhang, Nan Zhao, Rubayat Khan, Ming-Yang Hung, Chi Zhang, Shuo Wang, Tony J.C. Wang, Chi Lin

School of Biological Sciences: Faculty Publications

Androgen receptor (AR) overexpression has been identified in gliomas and its stem cells, suggesting that AR plays an important role in tumor carcinogenesis. The prognostic significance of AR overexpression in gliomas remains unknown. AR mRNA expression in gliomas and relevant clinical data were obtained from The Cancer Genome Atlas and Chinese Glioma Genome Atlas databases. AR expression levels were compared across gliomas of different histopathologic grades and molecular subtypes. Kaplan–Meier analyses in patients with different AR expression levels were investigated for the potential prognostic values of AR. Compared with normal brain tissue, gliomas show significantly higher AR mRNA expression ( …

Targeted Weed Management Of Palmer Amaranth Using Robotics And Deep Learning (Yolov7), Amlan Balabantaray, Shaswati Behera, Cheetown Liew, Nipuna Chamara, Mandeep Singh, Amit J. Jhala, Santosh Pitla

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Effective weed management is a significant challenge in agronomic crops which necessitates innovative solutions to reduce negative environmental impacts and minimize crop damage. Traditional methods often rely on indiscriminate herbicide application, which lacks precision and sustainability. To address this critical need, this study demonstrated an AI-enabled robotic system, Weeding robot, designed for targeted weed management. Palmer amaranth (Amaranthus palmeri S. Watson) was selected as it is the most troublesome weed in Nebraska. We developed the full stack (vision, hardware, software, robotic platform, and AI model) for precision spraying using YOLOv7, a state-of-the-art object detection deep learning technique. The …

Climate Smart Agriculture, J. David Aiken

Cornhusker Economics

There are several programs encouraging producers to reduce their carbon intensity, including United States Department of Agriculture climate-smart agriculture programs, the 2024 Nebraska Climate Action Plan, and the 2024 Nitrogen Reduction Incentive Act. The hope is that producers with lower carbon intensity (CI) scores will receive a premium for their products. Producers would be well advised to learn more about these programs, as reducing carbon intensity in agriculture seems to be an emerging agricultural policy trend that will be with us for some time to come.

Immunity And Protective Efficacy Of A Plant-Based Tobacco Mosaic Virus-Like Nanoparticle Vaccine Against Influenza A Virus In Mice, Adthakorn Madapong, Erika M. Petro-Turnquist, Richard J. Webby, Allison A. Mccormick, Eric A. Weaver

School of Biological Sciences: Faculty Publications

Background: The rapid production of influenza vaccines is crucial to meet increasing pandemic response demands. Here, we developed plant-made vaccines comprising centralized consensus influenza hemagglutinin (HA-con) proteins (H1 and H3 subtypes) conjugated to a modified plant virus, tobacco mosaic virus (TMV) nanoparticle (TMV-HA-con). Methods: We compared immune responses and protective efficacy against historical H1 or H3 influenza A virus infections among TMV-HA-con, HA-con protein combined with AddaVax™ adjuvant, and whole-inactivated virus vaccine (Fluzone®). Results: Immunogenicity studies demonstrated robust IgG, IgM, and IgA responses in the TMV-HA-con and HA-con protein vaccinated groups, with relatively low induction of interferon (IFN)-γ⁺ T-cell …

Irrigation Pumping Plants: Energy Consumption And Pumping Plant Performance [Class Handout], Derek M. Heeren, Saleh Taghvaeian, Abia Katimbo, Xin Qiao

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Irrigation can be a large contributor to energy consumption on an irrigated farm. It is important to understand factors that impact irrigation energy use and to identify opportunities to reduce energy consumption. This class handout introduces a set of equations for calculating energy consumption for an irrigation pumping plant based on flow conditions and pump efficiency. It also presents typical values for motor performance (including both electric motors and internal combustion engines) in both SI and USCS units. Finally, the handout introduces the concept of a field evaluation of an irrigation pumping plant along with the Nebraska Pumping Plant Performance …

Dissecting The Genetic Architecture Of Sunflower Disc Diameter Using Genome-Wide Association Study, Yavuz Delen, Ravi V. Mural, Semra Palali-Delen, Gen Xu, James C. Schnable, Ismail M. Dweikat, Jinliang Yang

Department of Agronomy and Horticulture: Faculty Publications

Sunflower (Helianthus annuus L.) plays an essential role in meeting the demand for edible oil worldwide. The yield of sunflower seeds encompasses several component traits, including the disc diameter. Over three consecutive years, 2019, 2020, and 2022, we assessed phenotypic variation in disc diameter across a diverse set of sunflower accessions (N = 342) in replicated field trials. Upon aggregating the phenotypic data from multiple years, we estimated the broad sense heritability (H²) of the disc diameter trait to be 0.88. A subset of N = 274 accessions was genotyped by using the tunable genotyping-by-sequencing (tGBS) method, …

Two New Species Of Anthrenus Geoffroy (S. Str.) (Coleoptera: Dermestidae: Megatominae) From Egypt And Eritrea, Graham J. Holloway, Andreas Herrmann

Insecta Mundi

Two new species, Anthrenus kushangaza Holloway and Herrmann and Anthrenus kittenbergeri Holloway and Herrmann (Coleoptera: Dermestidae: Megatominae) from northeast Africa are described. Images of internal and external features are presented and compared with A. crustaceus Reitter and A. rauterbergi Reitter, both of which are found in the same geographical region as the new species.

A New Genus Of Horn-Like Tetrigids (Orthoptera: Caelifera: Tetrigidae) From South America, Daniela Santos Martins Silva, Marcelo Ribeiro Pereira

Insecta Mundi

A new pygmy unicorn genus, Brazitettix Silva, new genus, and two new species, Brazitettix roraimae Silva, new species and Brazitettix paulista Silva, new species (Orthoptera: Caelifera: Tetrigidae) are described in Brazil. This new genus is a unique tetrigid taxon in the American continent due a notched-long and elevated head projection. The morphology of this taxon resembles Rostella Hancock, 1913 and Dravidacris Bhaskar and Kasalo, 2022 that are currently comprised into Cleostratini, an artificial group that contains biogeographic distant taxa with distinct morphological head projection.

Resumen

Un nuevo género de tetrígidos, Brazitettix Silva, nuevo género, y dos nuevas especies, …

First Record Of The Diamond-Backed Watersnake (Nerodia Rhombifer) In Nebraska, Joseph W. Paysen, Keith Geluso, Daniel D. Fogell

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The diamond-backed Watersnake (Nerodia rhombifer) is a fairly large-bodied (≤2100g), semi-aquatic snake associated with wetlands throughout the south-central United States. Distribution of this species closely aligns with river floodplains in parts of its distribution, including the Missouri River floodplain as far north as Holt County, Missouri. Herein, we report on the first record of the Diamond-backed Watersnake in Nebraska. On May 21, 2011, Daniel D. Fogell collected a juvenile Diamond-backed Watersnake in southeastern Richardson County representing the first occurrence of the species in the state, which is adjacent to Holt County, Missouri. In extreme southeastern Nebraska, the distribution of this …

Correcting The Record: Subspecific Identification Of Nebraska’S Lone Common Eider (Somateria Mollissima), Sam Manning, Joel G. Jorgensen, Stephen J. Brenner, W. Ross Silcock

Nebraska Bird Review

In late November or early December 1967, Roger Guenther harvested a Common Eider (Somateria mollissima) on Maloney Canal between Maloney and Sutherland in Lincoln County, Nebraska. The head and a single foot from the carcass were deposited at the University of Nebraska State Museum via the University of Nebraska–Lincoln and the Nebraska Fish and Game Department (now the Game and Parks Commission). Dr. Jean Tate prepared the parts, which were inventoried as specimen #ZM-12341 in the UNSM. Dr. Paul Johnsgard purportedly took this specimen to the Field Museum of Natural History in Chicago for identification purposes, and concluded …

2023 (35th) Report Of The Nou Records Committee, Mark A. Brogie

Nebraska Bird Review

The functions and methods of the Nebraska Ornithologists’ Union Records Committee (NOURC) are described in its bylaws (NOURC 2010). The committee’s purpose is to provide a procedure for documenting unusual bird sightings and to establish a list of all documented birds for Nebraska. Species for which the NOURC seeks documentation (NOURC Review List) can be found at the NOU website https://noubirds.org/Birds/ReviewList.aspx. Starting in 2020, the NOURC decided to deal mainly with those species deemed as Accidental on the “Official List of the Birds of Nebraska”. Casual species and out-of- range species are now summarized in the “Seasonal Reports” of the …

The Nebraska Bird Review (September 2024) 92(3), Whole Issue

Nebraska Bird Review

Summer Field Report, June–July 2024, by W. Ross Silcock

Correcting the Record: Subspecific Identification of Nebraska’s Lone Common Eider (Somateria mollissima), by Sam Manning, Joel G. Jorgensen, Stephen J. Brenner, and W. Ross Silcock

2023 (35th) Report of the NOU Records Committee, by Mark A. Brogie

Subscription and Organization Information

Summer Field Report, June–July 2024, W. Ross Silcock

Nebraska Bird Review

This was an intriguing summer in several ways. I am far from being a knowledgeable ecologist, but, like most of us, as a layman I wonder whether and how weather affects birds, and if and how local weather is reflecting the conventional wisdom of climate change. Climate change seems increasingly to be expressed as various extreme or rapidly changing weather events that have differing effects on vegetation and consequently insect and larger prey populations. Every species responds differently it seems, depending on its biological needs, but food supply is the most important issue for birds. It is tempting to assign …

Unl Emeriti And Retirees Association Newsletter, September 2024

UNL Emeriti and Retirees Association: Newsletters and Other Materials

University of Nebraska-Lincoln Emeriti and Retirees Association Newsletter, September 2024

Dirt/Μ: Automated Extraction Of Root Hair Traits Using Combinatorial Optimization, Peter Pietrzyk, Neen Phan-Udom, Chartinun Chutoe, Lise Pingault, Ankita Roy, Marc Libault, Patompong Johns Saengwilai, Alexander Bucksch

Department of Entomology: Faculty Publications

As with phenotyping of any microscopic appendages, such as cilia or antennae, phenotyping of root hairs has been a challenge due to their complex intersecting arrangements in two-dimensional images and the technical limitations of automated measurements. Digital Imaging of Root Traits at Microscale (DIRT/μ) is a newly developed algorithm that addresses this issue by computationally resolving intersections and extracting individual root hairs from two-dimensional microscopy images. This solution enables automatic and precise trait measurements of individual root hairs. DIRT/μ rigorously defines a set of rules to resolve intersecting root hairs and minimizes a newly designed cost function to combinatorically identify …

Complete Genome Sequence Of An Indian Outbreak Strain Of Chikungunya Virus, Eshna Laha, Deepak Jena, Viplov K. Biswas, Sharad Singh, Sunil K. Raghav, Asit K. Pattnaik, Soma Chattopadhyay

Nebraska Center for Virology: Faculty Publications

Here, we report the complete genome sequence of an Indian strain of chikungunya virus isolated from an infected patient from Hyderabad, Andhra Pradesh, India, during a massive outbreak in 2005–2006. The genome length spans 11,811 nucleotides and has a poly(A) tail of 29 residues at the 3′ end.

Imaging Photoinduced Dynamics In Gas-Phase Molecules Using Ultrafast Electron And X-Ray Diffraction, Sri Bhavya Muvva

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Investigating the ultrafast structural changes in photoexcited molecules provides essential information on their governing reaction mechanisms and product formation. Time-resolved electron and X-ray diffraction are crucial techniques for capturing the structural information of photoexcited molecules on femtosecond timescales. This thesis presents the investigations of photochemical reactions in gas-phase molecules using ultrafast electron and X-ray diffraction experiments.

Photoexcitation of conjugated diene molecules with ultraviolet (UV) laser pulses can lead to different reaction mechanisms, depending on their double bonds’ positions and molecular rigidity. Chapter 2 of this dissertation discusses the femtosecond time-resolved UV-induced excited-state structural dynamics of cis,cis-1,3-cyclooctadiene, an eight-membered cyclic conjugated …

Gsp-Ai: An Ai-Powered Platform For Identifying Key Growth Stages And The Vegetative-To-Reproductive Transition In Wheat Using Trilateral Drone Imagery And Meteorological Data, Liyan Shen, Guohui Ding, Robert Jackson, Mujahid Ali, Shuchen Liu, Arthur Mitchell, Yeyin Shi, Xuqi Lu, Jie Dai, Greg Deakin, Katherine Anna Frels, Haiyan Cen, Yufeng Ge, Ji Zhou

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Wheat (Triticum aestivum) is one of the most important staple crops worldwide. To ensure its global supply, the timing and duration of its growth cycle needs to be closely monitored in the field so that necessary crop management activities can be arranged in a timely manner. Also, breeders and plant researchers need to evaluate growth stages (GSs) for tens of thousands of genotypes at the plot level, at different sites and across multiple seasons. These indicate the importance of providing a reliable and scalable toolkit to address the challenge so that the plot-level assessment of GS can be …

How Much Green To Keep The Garden Clean? An Analysis Of The Willingness To Pay (Wtp) Of Home Gardeners For Biowrap Technology, Gengchen Cai, Kanij Fatema, Karina A. Schoengold

Cornhusker Economics

A research team from the University of Nebraska-Lincoln, Kansas State University, and South Dakota School of Mines are working on creating an alternative product that would use locally available materials to create a spray-on, biodegradable polymer that can suppress weeds and will biodegrade in a timeframe that is amenable to crop production. We broadly refer to this technology as BioWRAP (Bioplastics with Regenerative Agricultural Properties).

Our results show that the home garden market is potentially a significant one for a BioWRAP product. Continued work in the development of the BioWRAP technology is necessary to determine what the cost of a …

Natural Killer Cell Effector Function Is Critical For Host Defense Against Alcohol-Associated Bacterial Pneumonia, Daniel Villageliu, Kelly C. Cunningham, Deandra R. Smith, Daren L. Knoell, Mason Mandolfo, Todd A. Wyatt, Derrick R. Samuelson

Food for Health: Publications

Alcohol use is an independent risk factor for the development of bacterial pneumonia due, in part, to impaired mucus-facilitated clearance, macrophage phagocytosis, and recruitment of neutrophils. Alcohol consumption is also known to reduce peripheral natural killer (NK) cell numbers and compromise NK cell cytolytic activity, especially NK cells with a mature phenotype. However, the role of innate lymphocytes, such as NK cells during host defense against alcohol-associated bacterial pneumonia is essentially unknown. We have previously shown that indole supplementation mitigates increases in pulmonary bacterial burden and improves pulmonary NK cell recruitment in alcohol-fed mice, which were dependent on aryl hydrocarbon …

Technical Note: Assessing Gps Sensor Accuracy Using Real-Time Kinematic Device For Livestock Tracking, Biquan Zhao, Rebecca Mcdermott, Galen E. Erickson, Yijie Xiong

Department of Animal Science: Faculty Publications

The technical aspects of global positioning system (GPS) sensors have been improved substantially over the years, making them valuable and popular tools for livestock tracking. Using GPS sensors allows producers and researchers to locate grazing livestock, monitor their behavior and distribution, and gather referencing information about the health status of the animals and pastures. However, interpreting the behavior of grazing livestock, such as cattle, from GPS data can be difficult due to positioning inaccuracies. Without knowing the positioning accuracy range of GPS sensors, achieving high-level confidence in determining grazing densities and identifying abnormal livestock movement patterns is challenging. …

Amphiphala, A New Genus And Its Three New Species From Eastern North America (Lepidoptera: Tortricidae: Cochylina), Michael A. Roberts, Michael Sabourin, John W. Brown

Insecta Mundi

Amphiphala Roberts and Sabourin, new genus (Lepidoptera: Tortricidae), is proposed for three new species: A. liatriana Roberts and Sabourin, new species; A. landryana Brown, new species; and A. carolana Sabourin, new species. The genus is recorded from the eastern part of North America from Ontario, Canada south to South Carolina, and west to Manitoba and Mississippi. Owing to its superficial similarity to the banded sunflower moth, Cochylichroa hospes (Walsingham, 1884), Amphiphala remained hidden in North American Lepidoptera collections. Amphiphala liatriana has been reared from northern blazing star, Liatris scariosa (L.) Willd. (Asteraceae), in Maine.

Association Mapping Of Important Agronomic Traits In Mucuna Pruriens (L.) Dc., Patrush Lepcha, Mahesh Shekhar, Leelambika Murugesan, Mahammad Jaheer, Ratan Chopra, Vikas Belamkar, Narayana Sathyanarayana

Department of Agronomy and Horticulture: Faculty Publications

Background The tropical legume Mucuna pruriens (L.) DC. can meet three agricultural needs: low-cost protein, highvalue medicines, and green manure or cover crops. But like other underutilized crops, it needs more modern breeding resources. Identifying marker-trait associations (MTAs) can facilitate marker-assisted breeding and crop improvement. Recent studies have demonstrated the feasibility of identifying MTAs using a small number of accessions (< 100). We have characterized a panel of 70 M. pruriens accessions across two consecutive years and performed association analysis for 16 phenotypic traits related to seed (seed length, seed width, seed thickness, seed yield per plant, hundred seed weight); pod (pod length, pod width, number of pods …

Challenges In Assessing Repellency Via The Behavioral Response By The Global Pest Tribolium Castaneum To Protect Stored Grains, Leslie Catherine Rault, William R. Morrison Iii, Alison R. Gerken, Georgina Bingham

Department of Entomology: Faculty Publications

Background: Food security is an increasingly pressing global issue, and by 2050, food production will not be sufficient to feed the growing population. Part of global food insecurity can be attributed to post-harvest losses, including quantity and quality losses caused by stored-product pests like insects. It is thus timely to find management strategies to mitigate these losses and counteract food insecurity. The red flour beetle, Tribolium castaneum (Herbst) (Coleoptera: Tenebrionidae), a global stored-product pest with a wide range of food sources, was used in this study to assess repellency to a selection of essential oils. Methods: Multiple behaviorally relevant methods …

Knockdown Of Gonadotropin-Releasing Hormone Ii Receptor Impairs Ovulation Rate, Corpus Luteum Development, And Progesterone Production In Gilts, Amy T. Desaulniers, Rebecca Cederberg, Clay A. Lents, Brett White

Department of Animal Science: Faculty Publications

Reproduction is classically controlled by gonadotropin-releasing hormone (GnRH-I) and its receptor (GnRHR-I) within the brain. In pigs, a second form (GnRH-II) and its specific receptor (GnRHR-II) are also produced, with greater abundance in peripheral vs. central reproductive tissues. The binding of GnRH-II to GnRHR-II has been implicated in the autocrine/paracrine regulation of gonadal steroidogenesis rather than gonadotropin secretion. Blood samples were collected from transgenic gilts, with the ubiquitous knockdown of GnRHR-II (GnRHR-II KD; n = 8) and littermate controls (n = 7) at the onset of estrus (follicular) and 10 days later (luteal); serum concentrations of 16 steroid hormones …

Molecular Detection Of Pathogenic Bacteria In American Dog Ticks (Dermacentor Variabilis) In Brown County, Nebraska, Nicole Messbarger, Darby Carlson, Keith Geluso, Julie Shaffer

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Ticks carry and transmit disease pathogens that cause many human illnesses. Many of these diseases in humans are accompanied by a wide variety of symptoms making tick-borne illnesses often difficult to diagnose. The rate of reported tick-borne illnesses in humans has increased during the past decades in the United States, alongside a rise in concern for public health and safety. In northern Nebraska, the American dog tick (Dermacentor variabilis) is the primary tick encountered by humans and domestic animals in the region. This species is a known vector for spotted fever group (SFG) rickettsioses and tularemia (Francisella …

Development Of A Multidimensional Measure Of Wellbeing For Emerging Adults Utilizing A Convergent Parallel Mixed Method Design, Kelley Marie Wick

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Attempting to conceptualize wellbeing is difficult, and the current research literature does not offer a standard definition that encapsulates the complexity of this construct, nor has there been a thorough consideration the impact of culture and societal standards of behavior on wellbeing. Additionally, the emergence of a new developmental period between adolescence and true adulthood (emerging adulthood) offers an additional layer of nuance, as many of the traditional scales currently used to measure wellbeing are inappropriate for emerging adults. A major gap in the current research literature is the reluctance in developing measures with the help of the target population. …

Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Applications For Metabolomics, Darcy Cochran, Robert Powers

Robert Powers Publications

Metabolomics is an interdisciplinary field that aims to study all metabolites < 1500 Da that are ubiquitously found within all organisms. Metabolomics is experiencing exponential growth and commonly relies on high-resolution mass spectrometry (HRMS). Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) is a form of HRMS that is particularly well suited for metabolomics research due to its exceptionally high resolution (10⁵–10⁶) and sensitivity with a mass accuracy in parts per billion (ppb). In this regard, FT-ICR-MS can provide valuable insights into the metabolomics analysis of complex biological systems due to unique capabilities such as the easy separation of isobaric and isomeric species, isotopic fine structure analysis, spatial resolution of metabolites in cells and tissues, and a high confidence (error) in metabolite identification. Alternatively, the large and complex data sets, long acquisition times, high cost, and limited access mainly through national mass spectrometry facilities may impede the …