Digital Commons Network^™

Emerging Biomedical Applications Of The Vesicular Stomatitis Virus Glycoprotein, Sheeba Rehman, Suman Bishnoi, Rajarshi Roy, Anshu Kumari, Harikrishnan Jayakumar, Sharad Gupta, Parimal Kar, Asit K. Pattnaik, Bebasis Nayak

School of Veterinary and Biomedical Sciences: Faculty Publications

Nanoparticles (NPs) made of metals, polymers, micelles, and liposomes are increasingly being used in various biomedical applications. However, most of these NPs are hazardous for long- and short-term use and hence have restricted biomedical applications. Therefore, naturally derived, biocompatible, and biodegradable nanoconstructs are being explored for such applications. Inspired by the biology of viruses, researchers are exploring the viral proteins that hold considerable promise in biomedical applications. The viral proteins are highly stable and further amenable to suit specific biological applications. Among various viral proteins, vesicular stomatitis virus glycoprotein (VSV-G) has emerged as one of the most versatile platforms for …

Phip-Seq Reveals Autoantibodies For Ubiquitously Expressed Antigens In Viral Myocarditis, Mahima T. Rasquinha, Ninaad Lasrado, Erika M. Petro-Turnquist, Eric A. Weaver, Thiagarajan Venkataraman, Daniel R. Anderson, H. Benjamin Larman, Jay Reddy

School of Veterinary and Biomedical Sciences: Faculty Publications

Simple Summary: Myocarditis is the inflammation of the heart muscle, and viral infections are a common cause of this disease. Myocarditis in some patients can progress to dilated cardiomyopathy (DCM). The mouse model of coxsackievirus B3 (CVB3) is commonly used to understand this disease progression in DCM patients. In this paper, we have attempted to analyze antibodies for heart antigens that could be produced as a result of heart damage in animals infected with CVB3 using a technique called Phage ImmunoPrecipitation Sequencing (PhIP-Seq). The analyses led us to identify antibodies for several proteins that were not previously reported that may …

A Phytobacterial Tir Domain Effector Manipulates Nad+ To Promote Virulence, Samuel Eastman, Thomas Smith, Mark A. Zaydman, Panya Kim, Samuel Martinez, Neha Damaraju, Aaron Diantonio, Jeffrey Milbrandt, Thomas Clemente, James R. Alfano, Ming Guo

Department of Agronomy and Horticulture: Faculty Publications

The Pseudomonas syringae DC3000 type III effector HopAM1 suppresses plant immunity and contains a Toll/interleukin-1 receptor (TIR) domain homologous to immunity-related TIR domains of plant nucleotide-binding leucine-rich repeat receptors that hydrolyze nicotinamide adenine dinucleotide (NAD+) and activate immunity. In vitro and in vivo assays were conducted to determine if HopAM1 hydrolyzes NAD+ and if the activity is essential for HopAM1’s suppression of plant immunity and contribution to virulence. HPLC and LC-MS were utilized to analyze metabolites produced from NAD+ by HopAM1 in vitro and in both yeast and plants. Agrobacterium-mediated transient expression and in planta inoculation assays were performed to …

Mississippi Sandhill Crane Conservation Update 2017–2019, Scott G. Hereford, Angela J. Dedrickson

Proceedings of the North American Crane Workshop

To manage crane habitat on the Mississippi Sandhill Crane National Wildlife Refuge during 2017-2019, 5,822 ha were treated with prescribed burns, 648 ha of woody vegetation were removed, 97 ha of invasive plants were chemically treated, and 1.2 ha of crops were planted. Mississippi sandhill crane (Grus canadensis pulla) use responded to habitat treatment; 348 of 349 VHF radio locations were in treated areas. There were 316 target predators removed. Eighteen captive-reared juveniles were acclimated and released. We detected an average of 38 nests per year, including a record 40 nests in 2019. Fifteen chicks fledged in 2019, …

Twenty-Year Status Of The Eastern Migratory Whooping Crane Reintroduction, Hillary L. Thompson, Nicole M. Gordon, Darby P. Bolt, Jadine R. Lee, Eva K. Szyszkoski

Proceedings of the North American Crane Workshop

Since the 10-year status update in 2011, the first parent-reared whooping cranes (Grus americana) were released in the Eastern Migratory Population, the ultralight program (UL) ended, and cranes were released at new sites in eastern Wisconsin. During 2011-2020, 117 captive-reared whooping cranes were released; 75 costume-reared (35 in UL and 40 in the Direct Autumn Release program) and 42 parent-reared. There were no significant differences in 1- or 3-year survival rates based on rearing technique or release site. The population size remained at about 100 cranes during 2010-2018 but then decreased during 2018-2020 due to a reduced number …

Drivers Of Annual Fledging In The Mississippi Sandhill Crane Population 1991–2018, Henry W. Woolley, Scott G. Hereford, Jerome J. Howard

Proceedings of the North American Crane Workshop

We studied trends in nesting, number of chicks fledged annually, and their environmental and biotic drivers in the wild population of Mississippi sandhill cranes (Grus canadensis pulla) on Mississippi Sandhill Crane National Wildlife Refuge during 1991-2018. Population size, number of nests, and number of chicks fledged annually increased slowly but significantly over the course of the study. Increases in population size were related to both number of wild-reared chicks fledged annually and number of captive-reared chicks released each year, but wild-reared chicks had significantly higher survivorship than captive-reared chicks. Hurricanes transiently raised mortality rates but only Hurricane Katrina …

The Impact Of Marking On Cranes: An Issue Paper, Anne E. Lacy, Barry K. Hartup, David A. Brandt

Proceedings of the North American Crane Workshop

As crane researchers and conservationists, our overarching objective is to learn and gather information about our study subjects while doing as little harm as possible. New technologies may be emerging too rapidly for researchers to assess the effectiveness or potential adverse effects of the devices, despite the ease and increasing accuracy of the information they provide. Researchers need to be able to gather information to answer various questions in a way that balances ethics and expense. With marking of cranes as a focal point, we discuss issues surrounding crane research based on various techniques, some health issues that are a …

Paternalism To Partnership: The Administration Of Indian Affairs, 1786–2021, David H. Dejong

University of Nebraska Press: Sample Books and Chapters

Paternalism to Partnership examines the administration of Indian affairs from 1786, when the first federal administrator was appointed, through 2021. David H. DeJong examines each administrator through a biographical sketch and excerpts of policy statements defining the administrator’s political philosophy, drawn from official reports or the administrator’s own writings.

The Indian Office, as an executive agency under the secretary of war (1789 to 1849) and secretary of the interior (1849 to present), was directed by the president of the United States. The superintendents, chief clerks, commissioners, and assistant secretaries for Indian affairs administered policy as prescribed by Congress and the …

Evaluating The Effectiveness Of Readiness Assurance Testing As Part Of Team-Based Ecology Instruction, Danielle Berger, Larkin Powell

School of Natural Resources: Faculty Publications

Readiness Assurance Testing (RAT) incorporates content recall, immediate feedback and peer instruction, three strategies known to enhance student learning, into a single classroom activity. While iRAT and tRAT assessments are promising instructional tools, they are time-intensive to administer.

1.Do iRAT/tRAT tests promote student retention of content better than other in-class activities, justifying the investment of instructional time? 2.Are iRAT/tRAT tests beneficial across the spectrum of academic performance?

• Students get a larger proportion of RAT questions correct on exams than other multiple choice questions (Table 1, RAT~MC Intercept), supporting the claim that this instructional technique provides better content-retention than other …

Natural Resource System Size Can Be Used For Managing Recreational Use, D. S. Kane, K. L. Pope, K. D. Koupal, M. A. Pegg, C. Chizinski, M. Kaemingk

School of Natural Resources: Faculty Publications

No abstract provided.

Survey Of Federally Funded Marine Mammal Research – Fiscal Year 2022

United States Marine Mammal Commission

No abstract provided.

Developing A New Treatment For Superficial Fungal Infection Using Antifungal Collagen-Hsaf Dressing, Jing Zhong, Xiayi Yan, Xin Zuo, Xuan Zhao, Jiahui Yang, Qin Dou, Lulu Peng, Yuxiang Zhu, Yichen Xiao, Zeran Bian, Dalian He, Qiushuang Xu, Stephen Wright, Yaoyao Li, Liangcheng Du, Yan Wang, Jin Yuan

Department of Chemistry: Faculty Publications

Fungal pathogens are common causes of superficial clinical infection. Their increasing drug resistance gradually makes existing antifungal drugs ineffective. Heat stable antifungal factor (HSAF) is a novel antifungal natural product with a unique structure. However, the application of HSAF has been hampered by very low yield in the current microbial producers and from extremely poor solubility in water and common solvents. In this study, we developed an effective mode of treatment applying HSAF to superficial fungal infections. The marine-derived Lysobacter enzymogenes YC36 contains the HSAF biosynthetic gene cluster, which we activated by the interspecific signaling molecule indole. An efficient extraction …

Nebraska Water Center Annual Report 2022, Nebraska Water Center, Daugherty Water For Food Global Institute

Nebraska Water Center: Administrative Materials

CONTENTS

Overview: The Nebraska Water Center (https://watercenter.unl.edu)

Fast Facts: NWC 2022 Snapshot

Our Work

Water Sciences Lab Sees Rapid Growth in 2022 (https://watercenter.unl.edu/water-sciences-laboratory2)

WSL is Key to AltEn Contamination Monitoring (https://go.unl.edu/mead)

Know Your Well Project Enters Third Phase (https://knowyourwell.unl.edu)

Computer Science Students Build New Platform for Know Your Well Data Collection

Water Sciences Laboratory Helps Nebraska Tackle Nitrate (https://watercenter.unl.edu/water-sciences-laboratory2)

Nebraska Rural Poll Includes Water Quality Questions (https://ruralpoll.unl.edu and https://go.unl.edu/nitrate_strategy)

NWC Holds Platte River Basin Conference (https://watercenter.unl.edu/2022-nebraska-water-conference)

Spring Seminar Series (https://watercenter.unl.edu/spring-seminar-series)

Water Center Undergoes Five-Year …

Black Fly Survey Of A Whooping Crane Reintroduction Area In Eastern Wisconsin, Richard P. Urbanek, Peter H. Adler

Proceedings of the North American Crane Workshop

Nest desertion due to harassment by black flies (Simulium annulus and S. johannseni) during incubation has been a major factor inhibiting success of the reintroduced Eastern Migratory Population of whooping cranes (Grus americana). To avoid this problem, which was prevalent in the core reintroduction area in central Wisconsin, the Whooping Crane Eastern Partnership changed the primary reintroduction area to eastern Wisconsin in 2011. However, a 2010 assessment of black flies in that area had concentrated predominantly on the southern portion of the new area. In 2017-2018, we collected the first samples of black flies in …

No Panacea Attractant For Wild Pigs (Sus Scrofa), But Season And Location Matter, Nathan P. Snow, Caitlin A. Kupferman, Michael J. Lavelle, Kim M. Pepin, Madeline H. Melton, Whitney J. Gann, Kurt C. Vercauteren, James C. Beasley

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) are a prolific invasive species throughout many regions of the world that cause extensive economic and environmental damage. Trapping is a common strategy for reducing their populations with baits (i.e., food) and attractants (e.g., scents) used to lure wild pigs into traps. However, there is little information on which scent attractants may attract wild pigs more readily and rapidly across regions and seasons. We examined 60 scent attractants for wild pigs that could be used to increase trapping success across three seasons (winter, spring, and fall) and in two geographic regions, including a warm …

Predation Thresholds For Reintroduction Of Native Avifauna Following Suppression Of Invasive Brown Treesnakes On Guam, Robert M. Mcelderry, Eben H. Paxton, Andre V. Nguyen, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

The brown treesnake (BTS) (Boiga irregularis) invasion on Guåhan (in English, Guam) led to the extirpation of nearly all native forest birds. In recent years, methods have been developed to reduce BTS abundance on a landscape scale. To help assess the prospects for the successful reintroduction of native birds to Guåhan following BTS suppression, we modeled bird population persistence based on their life history characteristics and relative sensitivity to BTS predation. We constructed individual-based models and simulated BTS predation in hypothetical founding populations for each of seven candidate bird species. We represented BTS predation risk in two steps: …

Conserving Endangered Black-Footed Ferrets: Biological Threats, Political Challenges, And Lessons Learned, Travis M. Livieri, Steven C. Forrest, Marc R. Matchett, Stewart Breck

United States Department of Agriculture Wildlife Services: Staff Publications

There may be few stories in the annals of wildlife management that are as dramatic as the near demise and comeback of the black-footed ferret (Mustela nigripes). Endemic only to North America, this charming little carnivore found only in the continent’s central grasslands was hardly known to science until the mid-20th century. By then, vast colonies of the prey it depended on for food and shelter, the prairie dog (Cynomys spp.), had been wiped out through disease (sylvatic plague) and an agricultural industry with little tolerance for burrowing and grazing rodents. At its low point, the species’ …

Spatial Variability Of Silver Carp Population Demographics In A Large Tributary River, J. P. Werner, Q. J. Dean, Mark A. Pegg, M. J. Hamel

School of Natural Resources: Faculty Publications

No abstract provided.

An Evaluation Of Carbon Indicators Of Soil Health In Long-Term Agricultural Experiments, D. Liptzin, C. E. Norris, S. B. Cappellazzi, G. Macbean, Andrew E. Suyker Et Al.

School of Natural Resources: Faculty Publications

No abstract provided.

Does Fire And Herbicide Benefit Cattle Production In Invaded Grassland Landscapes?, N. A. Mcmillan, S. D. Fuhlendorf, L. E. Goodman, C. A. Davis, B. Luttbeg, R. G. Hamilton

School of Natural Resources: Faculty Publications

No abstract provided.

Active Learning And Student Achievement: A Matter Of Space, Experiences, Or Pedagogy?, Justin Bruner, Rebecca Affoo, Angela M. Dietsch

United States Public Health Resources

The goal of this study was to contribute to research on active learning by addressing the problem of disentangling the effects of classroom architecture, student characteristics, and pedagogical design as they relate to student achievement. The study utilized a quasi-experimental design where data was collected on student perceptions of their classroom, their experience in the course, and the pedagogy of the instructor, then analyzed with respect to the course grade. Results indicate that neither student perceptions of the classroom spaces nor the spaces themselves had an impact on course grade, but the pedagogy employed by the instructor and student experiences …

The Quest To Identify A New Virus Disease Of Sunflower From Nebraska, Robert M. Harveson, Maher Al Rwahnih, California Department Of Food And Agriculture, Alex Karasev, Tom J. Gulya, Jeff Bradshaw

Panhandle Research and Extension Center

Between 2010 and 2018, sunflower plants exhibiting virus-like symptoms, including stunting, mottling, and chlorotic ringspots on leaves, were observed from commercial fields and research plots from four sites within three distinct counties of western Nebraska (Box Butte, Kimball, and Scotts Bluff). Near identical symptoms from field samples were reproduced on seedlings mechanically in the greenhouse on multiple occasions, confirming the presence of a sap-transmissible virus from each site. Symptomatic greenhouse-inoculated plants from the 2010 and 2011 Box Butte samples tested negative for sunflower mosaic virus (SuMV), sunflower chlorotic mottle virus (SuCMoV), and all potyviruses in general by ELISA and RT-PCR. …

Developing An Injury Severity To Yield Loss Relationship For Soybean Gall Midge (Diptera: Cecidomyiidae), Mitchell L. Helton, Nicholas A. Tinsley, Anthony J. Mcmechan, Erin W. Hodgson

Eastern Nebraska Research, Extension, and Education Center

Soybean gall midge, Resseliella maxima Gagné (Diptera: Cecidomyiidae), is a newly identified pest confirmed on soybean, Glycine max (L.) Merr. (Fabales: Fabaceae). To date, soybean gall midge has been found in Nebraska, Iowa, South Dakota, Minnesota, and Missouri, and has caused severe economic loss to commercial fields since 2018. Much is still unknown about this pest, so research efforts have been focused on biology and management. Larvae feed on the inside of the stem just above the soil line and are difficult to access and time-consuming to sample. In order to accelerate nondestructive sampling efforts, we developed an injury rating …

Quasi-Spherical Absorbing Receiver Model Of Glioblastoma Cells For Exosome-Based Molecular Communications, Caio Fonseca, Michael Taynan Barros, Andreani Odysseos, Srivatsan Kidambi, Sasitharan Balasubramaniam

School of Computing: Faculty Publications

In this paper, we propose a mathematical and computational model for the GBM initiating of recurring focus as a quasi-spherical absorbing receiver considering the irregular shape as a Bernoulli trial process that accounts for the uncontrollable tumor growth over an initial spherical surface. Our results show that when GBM grow to irregular quasi-sphere shapes, they will increase the channel capacity, which is fully aligned with the evolution and configuration of GSC niches in GBM cultures.

Metabolic Synergy Between Human Symbionts Bacteroides And Methanobrevibacter, Jennie L. Catlett, Sean Carr, Mikaela Cashman, Megan D. Smith, Mary Walter, Zahmeeth Sakkaff, Christine A. Kelley, Massimiliano Pierobon, Myra B. Cohen, Nicole R. Buan

Department of Biochemistry: Faculty Publications

ABSTRACT Trophic interactions between microbes are postulated to determine whether a host microbiome is healthy or causes predisposition to disease. Two abundant taxa, the Gram-negative heterotrophic bacterium Bacteroides thetaiotaomicron and the methanogenic archaeon Methanobrevibacter smithii, are proposed to have a synergistic metabolic relationship. Both organisms play vital roles in human gut health; B. thetaiotaomicron assists the host by fermenting dietary polysaccharides, whereas M. smithii consumes end-stage fermentation products and is hypothesized to relieve feedback inhibition of upstream microbes such as B. thetaiotaomicron. To study their metabolic interactions, we defined and optimized a coculture system and used software testing …

Effects Of Release Techniques On Parent-Reared Whooping Cranes In The Eastern Migratory Population, Hillary L. Thompson, M. Susanna Glass, Marianne M. Wellington, Kim H. Boardman, Glenn H. Olsen

Proceedings of the North American Crane Workshop

Reintroduction of an Eastern Migratory Population (EMP) of whooping cranes (Grus americana) in the United States by release of captive-reared individuals began in 2001. As of 2020, the EMP has approximately 21 breeding pairs and has had limited recruitment of wild-hatched individuals, thus captive-reared juveniles continue to be released into breeding areas in Wisconsin to maintain the population. We investigated the effects of release techniques on survival, behavior, site fidelity, and conspecific associations of 42 captive-parent-reared whooping cranes released during 2013-2019 into the EMP. Individuals were monitored intensively post-release, then as a part of a long-term monitoring program, …

Vigilance Of Nesting Whooping Cranes In Juneau County, Wisconsin, Nicole M. Gordon, Darby P. Bolt, Hillary L. Thompson

Proceedings of the North American Crane Workshop

Vigilance plays an important role in the detection of possible threats and reducing the risk of predation, including during the incubation period. We examined the visual vigilance of incubating whooping cranes (Grus americana) in Juneau County, Wisconsin, during the 2019 nesting season. We deployed 9 trail cameras and tagged crane presence and behavior in 32,801 photos which were used in our analysis. We assessed individual nest and environmental variables and their effects on vigilant behavior of incubating cranes using linear mixed-models. Vigilant behavior was defined by a posture in which the crane’s head was up, neck was erect, …

Whooping Crane Stay Length In Relation To Stopover Site Characteristics, Andrew J. Caven, Aaron T. Pearse, David A. Brandt, Mary J. Harner, Greg D. Wright, David M. Baasch, Emma M. Brinley Buckley, Kristine L. Metzger, Matthew R. Rabbe, Anne E. Lacy

Proceedings of the North American Crane Workshop

Whooping crane (Grus americana) migratory stopovers can vary in length from hours to more than a month. Stopover sites provide food resources and safety essential for the completion of migration. Factors such as weather, climate, demographics of migrating groups, and physiological condition of migrants influence migratory movements of cranes (Gruidae) to varying degrees. However, little research has examined the relationship between habitat characteristics and stopover stay length in cranes. Site quality may relate to stay length with longer stays that allow individuals to improve body condition, or with shorter stays because of increased foraging efficiency. We examined this …

Art Exhibition: The Curious World Of Insects, Paula M. Courtney

Department of Entomology: Distance Master of Science Projects

This exhibition is a gallery of original mixed-media paintings by Paula M. Courtney intended to generate curiosity and appreciation for the field of entomology. It is human nature to fear what we do not know or understand. Art can be an effective catalyst for awareness creation and inspiration towards further education. Subjects depicted within these works of art were carefully selected with a goal of maintaining interest in an audience with emotions ranging from neutral to strong dislike towards insects and arachnids. This exhibition as a whole is designed to bridge the gap between a negative perception of insects and …

An Overview Of Integrated Pest Management In Greenhouse Systems, Kateri Cavanagh

Department of Entomology: Distance Master of Science Projects

Greenhouses are technological advancements that have existed since the first century. Human life and the field of agriculture have greatly improved with their invention. However, greenhouses come with their own set of challenges. One of the biggest issues with greenhouse systems is the presence of large pest populations. This is due to the ample food and water supply along with the relative stability of greenhouses. Pests in greenhouses are usually dealt with through the application of chemical pesticides. However, integrated pest management (IPM) is gaining traction for use in greenhouse systems. This overview will cover the history of greenhouses and …