Digital Commons Network^™

Legacy And Emerging Contaminants In Water And Wastewater, P. Chakraborty, Daniel D. Snow

School of Natural Resources: Faculty Publications

No abstract provided.

Evaluation Of Aggregate Stability Methods For Soil Health, E. L. Reike, D. K. Bagnall, C.L.S. Morgan, K. D. Flynn, Andrew E. Suyker Et Al.

School of Natural Resources: Faculty Publications

No abstract provided.

Selecting Soil Hydraulic Properties As Indicators Of Soil Health: Measurement Response To Management And Site Characteristics, D. K. Bagnall, C.L.S. Morgan, G. Mac Bean, D. Liptzin, Andrew E. Suyker Et Al.

School of Natural Resources: Faculty Publications

No abstract provided.

Power-Function Expansion Of The Polynomial Complementary Relationship Of Evaporation, Jozsef Szilagyi, N. Ma, R. Crago, R. Qualls

School of Natural Resources: Faculty Publications

No abstract provided.

Resilience Of Working Agricultural Landscapes, Shana Sundstrom, Jennifer Hodbod, Craig R. Allen

School of Natural Resources: Faculty Publications

Many alternative agricultural approaches have been developed as a response to the social and ecological costs of modern industrialized agriculture. These include diversified, organic, sustainably intensified, and ecologically intensified farming systems, each of which addresses different aspects of agriculture as a social-ecological system. However, clear theoretical models that account for human-nature coupling and the importance of scale are lacking. Global change, including climate change, land use change, and other human activities influencing social-ecological systems, is exacerbating uncertainty regarding agriculture system dynamics and increasing the need for comprehensive models that include a dynamical integration of socio-ecological-economic influences. Resilience theory and related …

Association Of Zoonotic Protozoan Parasites With Microplastics In Seawater: Implications For Human And Wildlife Health, E. Zhang, M. Kim, L. Rueda, C. Rochman, E. Vanwormer, J. Moore, K. Shapiro

School of Natural Resources: Faculty Publications

No abstract provided.

Remnant Prairies And High-Diversity Restorations Work Together To Support Wild Bees Season-Long, Katie Lamke, David A. Wedin, Judy Wu-Smart

School of Natural Resources: Faculty Publications

The presence of diverse bee communities in an ecosystem is vital for maintaining healthy plant communities, promoting habitat resilience, and supporting agriculture. In the US, wild bee declines have led to increased monitoring efforts, but there remain critical data gaps in much of the Midwest. Here, we sought to examine how variation in richness and abundance of flowering forbs influences the richness and abundance of wild bees across “remnant” tallgrass prairies, “high diversity” prairie restorations, and “low diversity” prairie restorations or degraded grasslands in eastern Nebraska. High-diversity plots attracted no bees in the early season due to a lack of …

Targeted Grazing And Mechanical Thinning Enhance Forest Stand Resilience Under A Narrow Range Of Wildfire Scenarios, V. M. Donovan, C. P. Roberts, D. T. Fogarty, David A. Wedin, D. Twidwell

School of Natural Resources: Faculty Publications

No abstract provided.

A Greenhouse Gas Emissions Inventory For Nebraska: Livestock And Coal Loom Large, Eric R. Holley, Adam Liska

Adam Liska Papers

Mitigation of climate change requires the systematic identification and cataloging of emissions sources at city, state, and national levels. In this study, an inventory of annual greenhouse gas emissions from the state of Nebraska was created based on industry data, and emissions inventories were completed each year from 1990 to 2016. Nebraska’s net emissions were found to increase from 56.2 million metric tons of carbon dioxide equivalents (MMtCO₂e) in 1990 to 87.4 MMtCO₂e in 2016. Agriculture was found to be the sector with the most emissions (36 MMtCO₂e) followed by electricity generation (21 MMtCO …

Invasive Plants Watch List: 2022, Allison Zach

Nebraska Invasive Species Program

The purpose of the weed watch list is to collect data on the distribution of invasive plants found in various Nebraska counties. Counties were divided up into ‘ecoregions’ based on the Nebraska Game & Parks Commission’s Legacy Plan (map of regions below). The plants in the watch list have been identified based on their invasiveness in surrounding states and their increasing range in Nebraska. Data collected on watch list plant species distribution has been used to support the listing or delisting of noxious weeds. Plant species in the weed watch list are categorized based on early detection and rapid response …

Center For Grassland Studies, January 2022

Center for Grassland Studies: Newsletters

Contents

Jerry Volesky Named Interim Director of Center for Grassland Studies by Lana Koepke Johnson

Center for Grassland Studies Policy Advisory Committee

Director's Column by Walt Schacht (Interim Director)

Center for Grassland Studies members and committees

Congratulations December 2021 Graduates

An Introduction: Social-ecological Rangeland Scientist by Gwendŵr Meredith

Examining Rangeland Management Under Changing Conditions by Kate Bird

Apply Now for CGS Scholarships and Assistantship

Center for Resilience in Agricultural Landscapes (CRAWL) Director on Team Awarded Patent for Firefighting Drones by Ronica Stromberg

Mark Your Calendar for the 2022 Nebraska Grazing Conference, August 9-10, https://grassland.unl.edu/nebraska-grazing-conference

Women for the Land Learning Circle: …

Research And Creative Activity, July 01, 2021-June 30, 2022: Major Sponsored Programs And Faculty Accomplishments In Research And Creative Activity, University Of Nebraska-Lincoln, Office Of Research And Economic Development, University Of Nebraska-Lincoln

Office of Research and Economic Development: Publications

Foreword by Bob Wilhelm, Vice Chancellor for Research and Economic Development:

This booklet highlights successes in research, scholarship and creative activity by University of Nebraska–Lincoln faculty during the fiscal year running July 1, 2021, to June 30, 2022.

It lists investigators, project titles and funding sources on major grants and sponsored awards that were active during the year; fellowships and other recognitions and honors bestowed on our faculty; books, chapters and creative literature published by faculty; performances, exhibitions and other examples of creative activity; patents and licensing agreements; and conference presentations. In recognition of the important role faculty play in …

Seasonal Variation In Terrestrial Invertebrate Subsidies To Tropical Streams And Implications For The Feeding Ecology Of Hart’S Rivulus (Anablepsoides Hartii), David C. Owens, Thomas N. Heatherly, Kent M. Eskridge, Colden V. Baxter, Steven A. Thomas

Department of Statistics: Faculty Publications

Terrestrial invertebrates are important subsidies to fish diets, though their seasonal dynamics and importance to tropical stream consumers are particularly understudied. In this year-round study of terrestrial invertebrate input to two Trinidadian headwater streams with different forest canopy densities, we sought to (a) measure the mass and composition of terrestrial inputs with fall-in traps to evaluate the influences of seasonality, canopy cover, and rainfall intensity, and; (b) compare terrestrial and benthic prey importance to Anablepsoides hartii(Hart’s Rivulus), the dominant invertivorous fish in these streams, by concurrently measuring benthic and drifting invertebrate standing stocks and the volume and composition of …

Kryging: Geostatistical Analysis Of Large-Scale Datasets Using Krylov Subspace Methods, Suman Majumder, Yawen Guan, Brian J. Reich, Arvind K. Saibaba

Department of Statistics: Faculty Publications

Analyzing massive spatial datasets using a Gaussian process model poses computational challenges. This is a problem prevailing heavily in applications such as environmental modeling, ecology, forestry and environmental health. We present a novel approximate inference methodology that uses profile likelihood and Krylov subspace methods to estimate the spatial covariance parameters and makes spatial predictions with uncertainty quantification for point-referenced spatial data. The proposed method, Kryging, applies for both observations on regular grid and irregularly-spaced observations, and for any Gaussian process with a stationary isotropic (and certain geometrically anisotropic) covariance function, including the popular Matérn covariance family. We make use of …

Hands-On With Ne Stem 4u: For Budding Stemers In Grades 4-8, Ne Stem 4u Program

Worlds of Connections Resources

Character Biographies 5

Chemistry: The Crystal Tree 10

Biology: Fruitful DNA 15 • Honey Purity Test 22 • Human DNA Extraction 26 • Model Cell 32 • Stethoscopes and Heart Rate 36

Engineering: Build a Catapult 41 • Building Bridges 47

Physics: Battling Balloons 51 • Balloon Popping 57 • Divin' Challenge 60 • Life Jackets and Buoyancy 65 • Simple Circuits 69 • Newton's Tower 75

Geology: Aquifers and Artesian Wells 80 • The Center of the Earth 84 • Mapping and Location Intelligence 88 • Seismology and Earthquakes 92 • Volcanoes 98

Mathematics: Hexaflexagons 102 • Stick Puzzle …

Measuring The Social And Ecological Performance Of Agricultural Innovations On Rangelands: Progress And Plans For An Indicator Framework In The Ltar Network, S. Spiegal, N. P. Webb, E. H. Boughton, R. K. Boughton, A. Bentley Brymer, P. E. Clark, C. D. Holifield Collins, D. L. Hoover Et. Al

School of Natural Resources: Faculty Publications

No abstract provided.

Network Science: Genealogy, Worlds Of Connections Sepa

Worlds of Connections Resources

Remember that family trees are a type of network. The network we create helps us understand which traits were passed down and who they came from. While humans can inherit traits like hair color and eye shape, sometimes they can inherit genetic diseases or be more likely to develop health issues because of their genetics. In most cases, inherited traits are based on probability, so tracing family networks can tell us how likely people are to have these types of diseases. When tracing the genealogical flow of relatedness from one generation to the next one or two generations, it is …

Research At Nebraska, 2021-2022 Report, University Of Nebraska-Lincoln

Office of Research and Economic Development: Publications

This publication is a snapshot of the fiscal year’s activities. To read more stories about research and creativity at Nebraska, visit the online edition at https://research.unl.edu/annualreport/2022. Additional multimedia are available for many stories.

Ferrihydrite Enrichment In The Rhizosphere Of Unsaturated Soil Improves Nutrient Retention While Limiting Arsenic And Uranium Plant Uptake, Arindam Malakar, Daniel D. Snow, Michael Kaiser, Jordan Shields, Bijesh Maharjan, Harkamal Walia, Daran Rudnick, Chittaranjan Ray

Nebraska Water Center: Faculty Publications

Improvement of nutrient use efficiency and limiting trace elements such as arsenic and uranium bioavailability is critical for sustainable agriculture and food safety. Arsenic and uranium possess different properties and mobility in soils, which complicates the effort to reduce their uptake by plants. Here, we postulate that unsaturated soil amended with ferrihydrite nanominerals leads to improved nutrient retention and helps reduce uptake of these geogenic contaminants. Unsaturated soil is primarily oxic and can provide a stable environment for ferrihydrite nanominerals. To demonstrate the utility of ferrihydrite soil amendment, maize was grown in an unsaturated agricultural soil that is known to …

Testing The Drosophila Maternal Haploid Gene For Functional Divergence And A Role In Hybrid Incompatibility, Dean M. Castillo, Benjamin Mccormick, Connor M. Kean, Sahana Natesan, Daniel A. Barbash

Nebraska Cooperative Extension: Faculty and Staff Publications

Crosses between Drosophila simulans females and Drosophila melanogaster males produce viable F1 sons and poorly viable F1 daughters. Unlike most hybrid incompatibilities, this hybrid incompatibility violates Haldane’s rule, the observation that incompatibilities preferentially affect the heterogametic sex. Furthermore, it has a different genetic basis than hybrid lethality in the reciprocal cross, with the causal allele in Drosophila melanogaster being a large species-specific block of complex satellite DNA on its X chromosome known as the 359-bp satellite, rather than a protein-coding locus. The causal allele(s) in Drosophila simulans are unknown but likely involve maternally expressed genes or factors since the F1 …

Web-Based Platform For Analysis Of Rna Folding From High Throughput Chemical Probing Data, Christopher Jurich, Amir Brivanlou, Silvi Rouskin, Joseph D. Yesselman

Department of Chemistry: Faculty Publications

RNA structures play critical roles in regulating gene expression across all domains of life and viruses. Chemical probing methods coupled with massively parallel sequencing have revolutionized the RNA structure field by enabling the assessment of many structures in their native, physiological context. Previously, we developed Dimethyl-Sulfate-based Mutational Profiling and Sequencing (DMS-MaPseq), which uses DMS to label the Watson-Crick face of open and accessible adenine and cytosine bases in the RNA. We used this approach to determine the genome-wide structures of HIV-1 and SARS-CoV-2 in infected cells, which permitted uncovering new biology and identifying therapeutic targets. Due to the simplicity and …

Head Impact Exposure In Youth And Collegiate American Football, Grace B. Choi, Eric P. Smith, Stefan M. Duma, Steven Rowson, Eamon Campolettano, Mireille E. Kelley, Derek A. Jones, Joel D. Stitzel, Jillian E. Urban, Amaris Genemaras, Jonathan G. Beckwith, Richard M. Greenwald, Arthur C. Maerlender, Joseph J. Crisco

Center for Brain, Biology, and Behavior: Faculty Publications

The relationship between head impact and subsequent brain injury for American football players is not well defined, especially for youth. The objective of this study is to quantify and assess Head Impact Exposure (HIE) metrics among youth and collegiate football players. This multiseason study enrolled 639 unique athletes (354 collegiate; 285 youth, ages 9–14), recording 476,209 head impacts (367,337 collegiate; 108,872 youth) over 971 sessions (480 collegiate; 491 youth). Youth players experienced 43 and 65% fewer impacts per competition and practice, respectively, and lower impact magnitudes compared to collegiate players (95th percentile peak linear acceleration (PLA, g) competition: 45.6 vs …

Constructing Neural Network Models From Brain Data Reveals Representational Transformations Linked To Adaptive Behavior, Takuya Ito, Guangyu Robert Yang, Patryk Laurent, Douglas H. Schultz, Michael W. Cole

Center for Brain, Biology, and Behavior: Faculty Publications

The human ability to adaptively implement a wide variety of tasks is thought to emerge from the dynamic transformation of cognitive information. We hypothesized that these transformations are implemented via conjunctive activations in “conjunction hubs”—brain regions that selectively integrate sensory, cognitive, and motor activations. We used recent advances in using functional connectivity to map the flow of activity between brain regions to construct a task-performing neural network model from fMRI data during a cognitive control task. We verified the importance of conjunction hubs in cognitive computations by simulating neural activity flow over this empirically-estimated functional connectivity model. These empiricallyspecified simulations …

Affective Flexibility As A Developmental Building Block Of Cognitive Reappraisal: An Fmri Study, Jordan E. Pierce, Eisha Haque, Maital Neta

Center for Brain, Biology, and Behavior: Faculty Publications

Cognitive reappraisal is a form of emotion regulation that involves reinterpreting the meaning of a stimulus, often to downregulate one’s negative affect. Reappraisal typically recruits distributed regions of prefrontal and parietal cortex to generate new appraisals and downregulate the emotional response in the amygdala. In the current study, we compared reappraisal ability in an fMRI task with affective flexibility in a sample of children and adolescents (ages 6–17, N = 76). Affective flexibility was defined as variability in valence interpretations of ambiguous (surprised) facial expressions from a second behavioral task. Results demonstrated that age and affective flexibility predicted reappraisal ability, …

Differential Impact Of Biological And Behavioral Traits On Postexercise Energy Intake In Men Andwomen, Christoph Höchsmann, Safiya E. Beckford, Jeffery A. French, Julie B. Boron, Jared Stevens, Karsten Koehler

Department of Psychology: Faculty Publications

The energy intake response to exercise is highly variable and energy (over-) compensation via increased post-exercise energy intake occurs in some individuals but not others. In explorative analyses, we aimed to identify biological and behavioral predictors of post-exercise ad libitum energy intake and whether these predictors differ from ad libitum energy intake after rest.

Conclusions:Post-exercise energy intake is associatedwithdifferent factors than energy intake after rest and behavioral and biological traits differentially affect post-exercise energy intake in men and women. In women, habitual exercise behavior seems to predict postexercise energy intake, protecting against compensatory eating. Inmen, appetite-regulating hormones play a role …

Fddm1 And Fddm2, Two Sgs3-Like Proteins, Function As A Complex To Affect Dna Methylation In Arabidopsis, Shengjun Li, Weilong Yang, Yunfeng Liu, Guangyong Li, Xiang Liu, Yaling Liu, James R. Alfano, Chi Zhang, Bin Yu

Center for Plant Science Innovation: Faculty Publications

DNA methylation is an important epigenetic modification required for the specific regulation of gene expression and the maintenance of genome stability in plants and animals. However, the mechanism of DNA demethylation remains largely unknown. Here, we show that two SGS3-like proteins, FACTOR OF DNA DEMETHYLATION 1 (FDDM1) and FDDM2, negatively affect the DNA methylation levels at ROS1-dependend DNA loci in Arabidopsis. FDDM1 binds dsRNAs with 50 overhangs through its XS (rice gene X and SGS3) domain and forms a heterodimer with FDDM2 through its XH (rice gene X Homology) domain. A lack of FDDM1 or FDDM2 increased DNA methylation levels …

Qteller: A Tool For Comparative Multi-Genomic Gene Expression Analysis, Margaret R. Woodhouse, Shatabdi Sen, David Schott, John L. Portwood Ii, Michael Freeling, Justin W. Walley, Carson M. Andorf, James Schnable

Center for Plant Science Innovation: Faculty Publications

Motivation: Over the last decade, RNA-Seq whole-genome sequencing has become a widely used method for measuring and understanding transcriptome-level changes in gene expression. Since RNA-Seq is relatively inexpensive, it can be used on multiple genomes to evaluate gene expression across many different conditions, tissues and cell types. Although many tools exist to map and compare RNA-Seq at the genomics level, few web-based tools are dedicated to making data generated for individual genomic analysis accessible and reusable at a gene-level scale for comparative analysis between genes, across different genomes and meta-analyses. Results: To address this challenge, we revamped the comparative gene …

Stem Exploration, Caitlyn Scott, Erin Case

Honors Program: Expanded Learning Clubs

After school club for middle school students consisting of individual and partner activities that will building teamwork and problem-solving skills. The club will also introduce the students to many different areas of STEM.

Stem Club Curriculum, Emily Hogg

Honors Program: Expanded Learning Clubs

No abstract provided.

A Home Shielded By Laws: Freedom Suits And Enslaved Mothers, Heidi Martin

Digital Legal Research Lab

This project collects, digitizes, and makes accessible the freedom suits brought by enslaved families in the Circuit Court for the District of Columbia, Maryland state courts, and the United States Supreme Court. This project places families in the foreground of our interpretive framework of slavery and national formation.

Using TEI encoding, we focused on outcomes, relationships between individuals and the claim for freedom made. Using these data sets, I focused specefically on mothers petitioning for their children. Of the 508 cases I utilized, 131 included children and a parental figure. I set out to distinguish the additional burden mothers had …