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Review Of Pharaxonotha Reitter (Coleoptera: Erotylidae: Pharaxonothinae) Inhabiting The Cycad Genus Dioon Lindl. (Cycadales), With Descriptions Of Nine New Species And Comments On P. Kirschii Reitter, Paul E. Skelley, William Tang, Miguel Angel Pérez-Farrera Feb 2022

Review Of Pharaxonotha Reitter (Coleoptera: Erotylidae: Pharaxonothinae) Inhabiting The Cycad Genus Dioon Lindl. (Cycadales), With Descriptions Of Nine New Species And Comments On P. Kirschii Reitter, Paul E. Skelley, William Tang, Miguel Angel Pérez-Farrera

Insecta Mundi

The beetle genus Pharaxonotha Reitter (Coleoptera: Erotylidae: Pharaxonothinae) is found in the cones of cycad genera in the New World, including species of Dioon Lindl., Ceratozamia Brongn., Microcycas (Miq.) A.DC and Zamia L. In this paper nine new species found in Dioon are described by Skelley, Tang and Pérez-Farrera: Pharaxonotha bicolor, P. dimorpha, P. fawcettae, P. gigantea, P. novoai, P. occidentalis, P. sclerotiza, P. woodruffi, P. vovidesi. A key to described species of Pharaxonotha inhabiting Dioon is presented, along with an account of Pharaxonotha kirschii …


In Memoriam: Robert E. Woodruff, July 20, 1933–July 8, 2021, Paul E. Skelley, Oliver Keller Feb 2022

In Memoriam: Robert E. Woodruff, July 20, 1933–July 8, 2021, Paul E. Skelley, Oliver Keller

Insecta Mundi

This and the following set of papers published in Insecta Mundi are dedicated to Robert E. Woodruff, as tribute and thanks from those he mentored or assisted throughout his life. Bob’s many contributions to the study of beetles, being a founding member and first president of the Center for Systematic Entomology (CSE), co-creating Insecta Mundi with Ross H. Arnett, Jr., and having served in various capacities for 30 years on the CSE board of directors and the editorial board of Insecta Mundi, were deemed significant enough to allow this paper outside our normal guidelines. The following pages highlight the life …


The First Report Of Lissomus Dalman (Coleoptera: Elateridae: Lissominae) From The Greater Antilles, With Two New Species From The Dominican Republic, Paul J. Johnson Feb 2022

The First Report Of Lissomus Dalman (Coleoptera: Elateridae: Lissominae) From The Greater Antilles, With Two New Species From The Dominican Republic, Paul J. Johnson

Insecta Mundi

Lissomus quisqueya new species and L. woodruffi new species are described. Both species are reported from the Dominican Republic on the island of Hispaniola. These are the first species of Lissomus Dalman reported from the Greater Antilles. Lissomus quisqueya is recorded from montane mesic forests in the Cordillera Central from Dajadon and La Vega provinces. Lissomus woodruffi is recorded from Barahona, Independencia and Pedernales provinces from montane mesic forest in the Sierra de Bahoruco. Morphologically, these species are most similar to members of the L. discedens Bonvouloir species group from Mesoamerica and South America. Known sites of occurrence of L. …


A Third Species Of Haroldiellus Gordon And Skelley, 2007 From Mexico And Central America (Coleoptera: Scarabaeidae: Aphodiinae: Aphodiini), Paul E. Skelley, Oliver Keller Feb 2022

A Third Species Of Haroldiellus Gordon And Skelley, 2007 From Mexico And Central America (Coleoptera: Scarabaeidae: Aphodiinae: Aphodiini), Paul E. Skelley, Oliver Keller

Insecta Mundi

Haroldiellus woodruffi Skelley and Keller, new species, (Coleoptera: Scarabaeidae: Aphodiinae: Aphodiini), from Costa Rica, Guatemala, Mexico, and Panama is described. An updated key for the genus, updated distributions, and diagnoses for the other two species are provided.

Se describe la nueva especie Haroldiellus woodruffi Skelley y Keller (Coleoptera: Sacarabaeidae: Aphodiinae: Aphodiinae) de Costa Rica, Guatemala, México y Panamá. Se provee una clave, distribuciones y diagnosis actualizadas para las otras dos especies.

Worldwide, the scarabaeid subfamily Aphodiinae Leach, 1815 (when including Aegialiinae Laporte, 1840) con­sists of about 3200 species in 14 tribes and around 280 genera (Nikolajev 2008; Skelley 2008; …


A New Species Of Phyllophaga Harris (Coleoptera: Scarabaeidae: Melolonthinae) From Puerto Rico, Kyle E. Schnepp Feb 2022

A New Species Of Phyllophaga Harris (Coleoptera: Scarabaeidae: Melolonthinae) From Puerto Rico, Kyle E. Schnepp

Insecta Mundi

Phyllophaga bobevelynorum Schnepp, new species (Coleoptera: Scarabaeidae: Melolonthinae), is described from Puerto Rico. The species is illustrated and diagnosed, and a checklist of the species in Puerto Rico is given.

The genus Phyllophaga Harris is extremely diverse, with over 850 species currently assigned to it, all occurring in the New World. As with almost all Phyllophaga in the West Indies, this new species belongs to the subgenus Cne­marachis Saylor, whose members have the outer surface of the metatibia with an incomplete carina. As discussed by Smith and Paulsen (2015), this subgenus is endemic to the West Indies and has a …


A New Genus Of Predatory Midge In The Monohelea Complex From Eocene Baltic Amber (Diptera: Ceratopogonidae), Ryszard Szadziewski, William L. Grogan Jr., Elżbieta Sontag, Błażej Bojarski Feb 2022

A New Genus Of Predatory Midge In The Monohelea Complex From Eocene Baltic Amber (Diptera: Ceratopogonidae), Ryszard Szadziewski, William L. Grogan Jr., Elżbieta Sontag, Błażej Bojarski

Insecta Mundi

Monogedania, a new fossil monotypic genus of predatory midge (Diptera: Ceratopogonidae) is described from Eocene Baltic amber and its position within the Monohelea complex is discussed. We dis­covered that the membranous portion of the aedeagus is extended in Monogedania clunipes (Loew), new combination, which suggests that the aedeagus of some extinct predatory midges can be penis-like. The Eocene Monohelea baltica Szadziewski, is transferred to the genus Schizohelea Kieffer, new combination, and, the previously unknown female is described, and key characters are included in color photographs of its entire habitus, head, distal hind tarsomeres and claws.

The Monohelea …


Extinct Or Extant? A New Species Of Termitodius Wasmann, 1894, (Coleoptera: Scarabaeidae: Aphodiinae: Rhyparini) With A Short Review Of The Genus, Paul E. Skelley, Julian Clavijo-Bustos, Oliver Keller Feb 2022

Extinct Or Extant? A New Species Of Termitodius Wasmann, 1894, (Coleoptera: Scarabaeidae: Aphodiinae: Rhyparini) With A Short Review Of The Genus, Paul E. Skelley, Julian Clavijo-Bustos, Oliver Keller

Insecta Mundi

A new species of Termitodius Wasmann (Coleoptera: Scarabaeidae: Aphodiinae: Rhyparini) is de­scribed from Colombia, Termitodius woodruffi Skelley, Clavijo-Bustos, and Keller, new species. This species is both extant and abundantly preserved in copal. The genus Termitodius is reviewed with a key and brief accounts to all species.

Una nueva especie de Termitodius Wasmann (Coleoptera: Scarabaeidae: Aphodiinae: Rhyparini) es descrita de Colombia, Termitodius woodruffi Skelley, Clavijo-Bustos, y Keller, nueva especie. Esta especie es existente y abundantemente preservada en copal. El género Termitodius es revisado con una clave y reseñas breves para todas las especies.

The pantropical tribe Rhyparini is represented …


Dichotomius Woodruffi, A New Dichotomius Species Of The Agenor Group From Costa Rica And Nicaragua (Coleoptera: Scarabaeidae: Scarabaeinae), Ángel Solis, Burt Kohlmann Feb 2022

Dichotomius Woodruffi, A New Dichotomius Species Of The Agenor Group From Costa Rica And Nicaragua (Coleoptera: Scarabaeidae: Scarabaeinae), Ángel Solis, Burt Kohlmann

Insecta Mundi

We describe a new species of Dichotomius Hope, 1838, from the D. agenor species-group from Costa Rica and Nicaragua: D. woodruffi Solís and Kohlmann, new species (Coleoptera: Scarabaeidae: Scara­baeinae). Based on this discovery, we confirm that Dichotomius enioi Montoya-Molina and Vaz-de-Mello, 2021 and D. agenor (Harold, 1869) are not currently distributed in Costa Rica. Instead, the only species of Dichotomius that are currently distributed in Costa Rica from the D. agenor species-group are D. centralis (Harold, 1869) and D. woodruffi. We discuss the distribution of the Dichotomius agenor species-group in Central America.

In …


A New Species Of Brachycerocoris Costa (Hemiptera: Heteroptera: Pentatomidae: Podopinae) From The Philippines, Joseph E. Eger Jr. Feb 2022

A New Species Of Brachycerocoris Costa (Hemiptera: Heteroptera: Pentatomidae: Podopinae) From The Philippines, Joseph E. Eger Jr.

Insecta Mundi

A new species, Brachycerocoris woodruffi Eger, is described from Mindanao Island, Philippines. The new species is described, illustrated and compared to the two other species of Brachycerocoris Costa occurring in the Philippines, B. dromedarius (Vollenhoven) and B. davidii Roca-Cusachs and Salini.

Brachycerocoris Costa belongs to the Brachycerocoris group of the Podopinae (Rider et al. 2018) and is represented in Africa by three species, B. afer Stål 1876, B. congoanus Schouteden 1905, and B. patrizii Mancini 1939. The genus has historically contained just two species in the Oriental region, B. camelus Costa 1863, described from China, and B. dromedarius (Vollenhoven 1863), …


New Fossil False Click-Beetles From The Americas (Coleoptera: Eucnemidae), Jyrki Muona Feb 2022

New Fossil False Click-Beetles From The Americas (Coleoptera: Eucnemidae), Jyrki Muona

Insecta Mundi

One new genus and three new false click-beetle species (Coleoptera: Eucnemidae) are described from American fossil resins: Neusiokia new genus, type species Neusiokia appalachiensis new species (North Carolina resin), Thambus woodruffi new species (Dominican resin) and Asiocnemis colombicus new species (Colombian resin).

Seventy-two fossil species are included in the family Eucnemidae presently. Half of them, 36, are based on Baltic amber materials (Muona 1993a; Muona 2021), 22 are from Myanmar amber deposits (Li et al. 2020; Muona 2020; Otto 2019) and 10 are mineral fossils, nine of these from China (Chang et al. 2016; Muona et al. 2020; Li et …


Paradigm Versus Paradox On The Prairie: Testing Competing Stream Fish Movement Frameworks Using An Imperiled Great Plains Minnow, Zachary D. Steffensmeier, Maeghen Wedgeworth, Lauren Yancy, Noah Santee, Shannon K. Brewer, Joshuah S. Perkin Feb 2022

Paradigm Versus Paradox On The Prairie: Testing Competing Stream Fish Movement Frameworks Using An Imperiled Great Plains Minnow, Zachary D. Steffensmeier, Maeghen Wedgeworth, Lauren Yancy, Noah Santee, Shannon K. Brewer, Joshuah S. Perkin

United States Geological Survey: Staff Publications

Background: Movement information can improve conservation of imperiled species, yet movement is not quantified for many organisms in need of conservation. Prairie chub (Macrhybopsis australis) is a regionally endemic freshwater fish with unquantified movement ecology and currently considered for listing under the Endangered Species Act. The purpose of this study was to test competing ecological theories for prairie chub movement, including the colonization cycle hypothesis (CCH) that posits adults must make upstream movements to compensate for downstream drift at early life stages, and the restricted movement paradigm (RMP) that describes populations as heterogeneous mixes of mostly stationary …


Ecology And Diversity Of Culturable Fungal Species Associated With Soybean Seedling Diseases In The Midwestern United States, Mirian F. Pimentel, Ali Y. Srour, Amanda J. Warner, Jason P. Bond, Carl A. Bradley, John Rupe, Martin I. Chilvers, J. Alejandro Rojas, Janette L. Jacobs, Christopher R. Little, Alison E. Robertson, Loren J. Giesler, Dean Malvick, Kiersten Wise, Albert Tenuta, Ahmad M. Fakhoury Feb 2022

Ecology And Diversity Of Culturable Fungal Species Associated With Soybean Seedling Diseases In The Midwestern United States, Mirian F. Pimentel, Ali Y. Srour, Amanda J. Warner, Jason P. Bond, Carl A. Bradley, John Rupe, Martin I. Chilvers, J. Alejandro Rojas, Janette L. Jacobs, Christopher R. Little, Alison E. Robertson, Loren J. Giesler, Dean Malvick, Kiersten Wise, Albert Tenuta, Ahmad M. Fakhoury

Department of Plant Pathology: Faculty Publications

Aims: To isolate and characterize fungi associated with diseased soybean seedlings in Midwestern soybean production fields and to determine the influence of environmental and edaphic factors on their incidence.

Methods and Results: Seedlings were collected from fields with seedling disease history in 2012 and 2013 for fungal isolation. Environmental and edaphic data associated with each field was collected. 3036 fungal isolates were obtained and assigned to 76 species. The most abundant genera recovered were Fusarium (73%) and Trichoderma (11.2%). Other genera included Mortierella, Clonostachys, Rhizoctonia, Alternaria, Mucor, Phoma, Macrophomina and Phomopsis. …


Vaccinia Virus Arrests And Shifts The Cell Cycle, Caroline K. Martin, Jerzy Samolej, Annabel T. Olson, Cosetta Bertoli, Matthew S. Wiebe, Robertus A. M. De Bruin, Jason Mercer Feb 2022

Vaccinia Virus Arrests And Shifts The Cell Cycle, Caroline K. Martin, Jerzy Samolej, Annabel T. Olson, Cosetta Bertoli, Matthew S. Wiebe, Robertus A. M. De Bruin, Jason Mercer

School of Veterinary and Biomedical Sciences: Faculty Publications

Modulation of the host cell cycle is a common strategy used by viruses to create a proreplicative environment. To facilitate viral genome replication, vaccinia virus (VACV) has been reported to alter cell cycle regulation and trigger the host cell DNA damage response. However, the cellular factors and viral effectors that mediate these changes remain unknown. Here, we set out to investigate the effect of VACV infection on cell proliferation and host cell cycle progression. Using a subset of VACV mutants, we characterise the stage of infection required for inhibition of cell proliferation and define the viral effectors required to dysregulate …


A Review Of The Impacts Of Invasive Wild Pigs On Native Vertebrates, Matthew T. Mcdonough, Stephen S. Ditchkoff, Mark D. Smith, Kurt C. Vercauteren Feb 2022

A Review Of The Impacts Of Invasive Wild Pigs On Native Vertebrates, Matthew T. Mcdonough, Stephen S. Ditchkoff, Mark D. Smith, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

The wild pig (Sus scrofa) is a successful invasive species that has become well established outside of its native range in Eurasia. The invasive wild pig is the result of released or escaped domesticated livestock becoming feral, or Eurasian boar introduced for hunting purposes. The global spread of wild pigs has recently been exacerbated in some areas, such as the USA, by anthropogenically assisted dispersal. Once established in novel ecosystems, wild pigs have the potential to have significant negative impacts on the ecosystem, and the scientific literature is replete with examples. It is generally accepted that wild pigs …


Mobility Of Phosphine-Susceptible And -Resistant Rhyzopertha Dominica (Coleoptera: Bostrichidae) And Tribolium Castaneum (Coleoptera: Tenebrionidae) After Exposure To Controlled Release Materials With Existing And Novel Active Ingredients, Sabita Ranabhat, Kun Yan Zhu, Georgina Bingham, William R., Morrison Iii Feb 2022

Mobility Of Phosphine-Susceptible And -Resistant Rhyzopertha Dominica (Coleoptera: Bostrichidae) And Tribolium Castaneum (Coleoptera: Tenebrionidae) After Exposure To Controlled Release Materials With Existing And Novel Active Ingredients, Sabita Ranabhat, Kun Yan Zhu, Georgina Bingham, William R., Morrison Iii

Department of Entomology: Faculty Publications

There is interest in developing controlled release materials (CRMs) with novel modes of action to improve resistance management. Long-lasting insecticide-incorporated netting (LLIN) with deltamethrin has been effectively used against stored-product pests. Here, we evaluated the efficacy of different CRMs (LLIN or packaging) with each of four active ingredients (AI) (deltamethrin, permethrin, indoxacarb, and dinotefuran) and compared them to control CRMs in reducing movement and increasing mortality of phosphine-susceptible and -resistant Rhyzopertha dominica and Tribolium castaneum. Adults were exposed for 0.5, 2, or 60 min, and movement was assessed immediately or after 24, or 168 h using video-tracking and Ethovision …


Role Of Specialized Pro-Resolving Mediators In Reducing Neuroinflammation In Neurodegenerative Disorders, Jana Ponce, Arzu Ulu, Corrine Hanson, Erin Cameron-Smith, Jenna Wuebker, John Bertoni, Alfred Fisher, Ka-Chun Siu, Vivien Marmelat, Jiri Adamec, Danish Bhatti Feb 2022

Role Of Specialized Pro-Resolving Mediators In Reducing Neuroinflammation In Neurodegenerative Disorders, Jana Ponce, Arzu Ulu, Corrine Hanson, Erin Cameron-Smith, Jenna Wuebker, John Bertoni, Alfred Fisher, Ka-Chun Siu, Vivien Marmelat, Jiri Adamec, Danish Bhatti

Department of Biochemistry: Faculty Publications

Alzheimer’s disease (AD) and Parkinson’s disease (PD) are neurodegenerative disorders that affect millions of individuals worldwide. As incidence of these conditions increases with age, there will undoubtedly be an increased prevalence of cases in the near future. Neuroinflammation is a hallmark in the development and progression of neurodegenerative diseases and prevention or resolution of chronic neuroinflammation may represent a novel approach to treatment. The present review highlights the potential of the anti-inflammatory and pro-resolving effects of polyunsaturated fatty acid (PUFA)- derived mediators (Specialized Pro-resolving Mediators—SPM) in neurodegenerative disorders. PUFA-derived SPM are biosynthesized in response to chemicals produced from acute inflammatory …


Chemical Reversible Crosslinking Enables Measurement Of Rna 3d Distances And Alternative Conformations In Cells, Ryan Van Damme, Kongpan Li, Minjie Zhang, Jianhui Bai, Wilson H. Lee, Joseph D. Yesselman, Zhipeng Lu, Willem A. Velema Feb 2022

Chemical Reversible Crosslinking Enables Measurement Of Rna 3d Distances And Alternative Conformations In Cells, Ryan Van Damme, Kongpan Li, Minjie Zhang, Jianhui Bai, Wilson H. Lee, Joseph D. Yesselman, Zhipeng Lu, Willem A. Velema

Department of Chemistry: Faculty Publications

Three-dimensional (3D) structures dictate the functions of RNA molecules in a wide variety of biological processes. However, direct determination of RNA 3D structures in vivo is difficult due to their large sizes, conformational heterogeneity, and dynamics. Here we present a method, Spatial 2′-Hydroxyl Acylation Reversible Crosslinking (SHARC), which uses chemical crosslinkers of defined lengths to measure distances between nucleotides in cellular RNA. Integrating crosslinking, exonuclease (exo) trimming, proximity ligation, and high throughput sequencing, SHARC enables transcriptome-wide tertiary structure contact maps at high accuracy and precision, revealing heterogeneous RNA structures and interactions. SHARC data provide constraints that improves Rosetta-based RNA 3D …


Improving Taxonomic Delimitation Of Fungal Species In The Age Of Genomics And Phenomics, Asjley Stengel, Kimberly M. Stanke, Amanda C. Quattrone, Joshua Herr Feb 2022

Improving Taxonomic Delimitation Of Fungal Species In The Age Of Genomics And Phenomics, Asjley Stengel, Kimberly M. Stanke, Amanda C. Quattrone, Joshua Herr

Department of Plant Pathology: Faculty Publications

Species concepts have long provided a source of debate among biologists. These lively debates have been important for reaching consensus on how to communicate across scientific disciplines and for advancing innovative strategies to study evolution, population biology, ecology, natural history, and disease epidemiology. Species concepts are also important for evaluating variability and diversity among communities, understanding biogeographical distributions, and identifying causal agents of disease across animal and plant hosts. While there have been many attempts to address the concept of species in the fungi, there are several concepts that have made taxonomic delimitation especially challenging. In this review we discuss …


Use Of A Direct, Rapid Immunohistochemical Test For Diagnosis Of Rabies Virus In Bats, Charles E. Rupprecht, Lolita Van Pelt, April D. Davis, Richard B. Chipman, David L. Bergman Feb 2022

Use Of A Direct, Rapid Immunohistochemical Test For Diagnosis Of Rabies Virus In Bats, Charles E. Rupprecht, Lolita Van Pelt, April D. Davis, Richard B. Chipman, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

Rabies, a zoonotic encephalitis due to transmission of a lyssavirus, such as rabies virus (RABV), has the highest case fatality of any infectious disease. A global program for the elimination of human rabies caused by dogs is proposed for realization by 2030. Sensitive, specific, and inexpensive diagnostic tests are necessary for enhanced surveillance to detect infection, inform public health and veterinary professionals during risk assessments of exposure, and support overall programmatic goals. Multiple laboratory techniques are used to confirm a suspect case of rabies. One method for the detection of lyssavirus antigens within the brain is the direct rapid immunohistochemical …


Hearing And Vestibular Loss With Misuse Of Opioids And Illicit Drugs: A Review Of The Literature, Michelle L. Hughes, Amanda Rodriquez, Jonathan Hatch, Kenneth Zoucha Feb 2022

Hearing And Vestibular Loss With Misuse Of Opioids And Illicit Drugs: A Review Of The Literature, Michelle L. Hughes, Amanda Rodriquez, Jonathan Hatch, Kenneth Zoucha

Department of Special Education and Communication Disorders: Faculty Publications

Background: The purpose of this review was to summarize the literature regarding the effects of opioids and illicit drugs on the auditory and vestibular systems.

Methods: Data were sourced from published papers reporting hearing loss (HL) and/or vestibular loss (VL) following misuse or overdose of opioids or illicit drugs. Most papers consisted of retrospective single-case reports, with few retrospective reviews or prospective cohort studies. Search terms included variations of HL, VL, opioids, and illicit drugs. Search results yielded 51 articles published between 1976 and 2021. A total of 44 articles were reviewed after excluding studies that were not available in …


Biogeosciences Perspectives On Integrated, Coordinated, Open, Networked (Icon) Science, D. Dwivedi, A. L. D. Santos, M. A. Barnard, T. M. Crimmins, A. Malhotra, K. A. Rod, K. S. Aho, S. M. Bell, B. Bomfim, F. Q. Brearley, H. Cadillo-Quiroz, J. Chen, C. M. Gough, E. B. Graham, C. R. Hakkenberg, L. Haygood, G. Koren, E. A. Lilleskov, L. K. Meredith, S. Naeher, Z. L. Nickerson, O. Pourret, H.-S. Song, M. Stahl, N. Taş, R. Vargas, S. Weintraub-Leff Feb 2022

Biogeosciences Perspectives On Integrated, Coordinated, Open, Networked (Icon) Science, D. Dwivedi, A. L. D. Santos, M. A. Barnard, T. M. Crimmins, A. Malhotra, K. A. Rod, K. S. Aho, S. M. Bell, B. Bomfim, F. Q. Brearley, H. Cadillo-Quiroz, J. Chen, C. M. Gough, E. B. Graham, C. R. Hakkenberg, L. Haygood, G. Koren, E. A. Lilleskov, L. K. Meredith, S. Naeher, Z. L. Nickerson, O. Pourret, H.-S. Song, M. Stahl, N. Taş, R. Vargas, S. Weintraub-Leff

Department of Food Science and Technology: Faculty Publications

This article is composed of three independent commentaries about the state of Integrated, Coordinated, Open, Networked (ICON) principles in the American Geophysical Union Biogeosciences section, and discussion on the opportunities and challenges of adopting them. Each commentary focuses on a different topic: (a) Global collaboration, technology transfer, and application (Section 2), (b) Community engagement, community science, education, and stakeholder involvement (Section 3), and (c) Field, experimental, remote sensing, and real-time data research and application (Section 4). We discuss needs and strategies for implementing ICON and outline short- and long-term goals. The inclusion of global data and international …


Hybrid Seed Set In Relation With Male Floral Traits, Estimation Of Heterosis And Combining Abilities For Yield And Its Components In Wheat (Triticum Aestivum L.), Samira El Hanafi, Souad Cherkaoui, Zakaria Kehel, Miguel Sanchez-Garcia, Jean-Benoit Sarazin, Stephen Baenziger, Wuletaw Tadesse Feb 2022

Hybrid Seed Set In Relation With Male Floral Traits, Estimation Of Heterosis And Combining Abilities For Yield And Its Components In Wheat (Triticum Aestivum L.), Samira El Hanafi, Souad Cherkaoui, Zakaria Kehel, Miguel Sanchez-Garcia, Jean-Benoit Sarazin, Stephen Baenziger, Wuletaw Tadesse

Department of Agronomy and Horticulture: Faculty Publications

Breeding hybrids with maximum heterosis requires efficient cross-pollination and an improved male sterility system. Renewed efforts have been made to dissect the phenotypic variation and genetic basis of hybrid floral traits, although the potential of tailoring the appropriate flower design on seed setting is less known. To this end, elite wheat genotypes were crossed using a chemical hybridizing agent at different doses. A total of 23 hybrids were developed from a partial diallel design; and planted in an alpha lattice design with their parents at two locations in Morocco, for two years, to evaluate for yield components, heterosis and combining …


The Astounding World Of Glycans From Giant Viruses, Anna Notaro, Chantal Abergel, Rosa Lanzetta, Todd L. Lowary, Antonio Molinaro, Michela Tonetti, James L. Van Etten, Cristina De Castro Feb 2022

The Astounding World Of Glycans From Giant Viruses, Anna Notaro, Chantal Abergel, Rosa Lanzetta, Todd L. Lowary, Antonio Molinaro, Michela Tonetti, James L. Van Etten, Cristina De Castro

Department of Plant Pathology: Faculty Publications

Viruses are a heterogeneous ensemble of entities, all sharing the need for a suitable host to replicate. They are extremely diverse, varying in morphology, size, nature, and complexity of their genomic content. Typically, viruses use host-encoded glycosyltransferases and glycosidases to add and remove sugar residues from their glycoproteins. Thus, the structure of the glycans on the viral proteins have, to date, typically been considered to mimick those of the host. However, the more recently discovered large and giant viruses differ from this paradigm. At least some of these viruses code for an (almost) autonomous glycosylation pathway. These viral genes include …


What Kigali’S Open‑Air Markets Reveal About Achieving Food And Nutrition Security: The Role Of African Indigenous Crops, Eugene Baraka, Mary S. Willis, Brice A. Ishimwe Feb 2022

What Kigali’S Open‑Air Markets Reveal About Achieving Food And Nutrition Security: The Role Of African Indigenous Crops, Eugene Baraka, Mary S. Willis, Brice A. Ishimwe

Department of Nutrition and Health Sciences: Faculty Publications

Background: Household dietary diversity in Rwanda remains low and significantly contributes to the double burden of malnutrition. Rwanda has one of the highest under five stunting rates globally, and malnutrition remains one of the most pressing public health issues; therefore, factors that shape food and nutrition security are of utmost concern. Globally, the variety of foods available in open-air markets has been shown to affect dietary diversity. Furthermore, the consumption of indigenous foods can contribute to a diverse diet and improve nutrition status. At present, there are limited data on foods available for purchase in open-air markets in Africa. …


The Crucial Role Of Sestrins In Oxidative Stress Response And Disease: An Analysis Of Phosphorylation Mutation S110a In Hsesn2, Julianne Fay Feb 2022

The Crucial Role Of Sestrins In Oxidative Stress Response And Disease: An Analysis Of Phosphorylation Mutation S110a In Hsesn2, Julianne Fay

Honors Program: Senior Projects (Public)

Sestrins are highly conserved proteins which are induced under environmentally stressful conditions to adjust the cell’s response to such disturbances. This protein possesses two domains critical for its dual function in reducing reactive oxygen species (ROS) and regulating the mTORC1 complex. Sestrins may use diverse transcription factors, such as Nrf2, peroxiredoxin reductase activity, and a catalytic cysteine to regenerate oxidized species; however this was confirmed to be through a mechanism likely different than AhpD, for which there was distance sequence similarity. Furthermore, Sestrins are important regulators of TORC1 and AMPK, which are crucial energy sensors able to control cellular metabolism …


Post-Termination Effects Of Cover Crop Monocultures And Mixtures On Soil Inorganic Nitrogen And Microbial Communities On Two Organic Farms In Illinois, Eleanor E. Lucadamo, Ashley A. Holmes, Samuel E. Wortman, Anthony C. Yannarell Feb 2022

Post-Termination Effects Of Cover Crop Monocultures And Mixtures On Soil Inorganic Nitrogen And Microbial Communities On Two Organic Farms In Illinois, Eleanor E. Lucadamo, Ashley A. Holmes, Samuel E. Wortman, Anthony C. Yannarell

Department of Agronomy and Horticulture: Faculty Publications

Cover crops can continue to affect agricultural systems even after they have been terminated by influencing nitrogen dynamics and by altering soil microbial communities. These post-termination effects can influence soil fertility, weed pressure, and the dynamics of potential plant pathogens in the narrow window of time between cover crop termination and cash crop emergence. We evaluated the post-termination effects of 12 different spring-sown cover crop mixtures and monocultures on soil nitrogen and microbial communities on two different organic farms in Central Illinois (on Lawson silt loam soil) and Northern Illinois (on Virgil silt loam soil). In comparison to control plots …


Post-Termination Effects Of Cover Crop Monocultures And Mixtures On Soil Inorganic Nitrogen And Microbial Communities On Two Organic Farms In Illinois, Eleanor E. Lucadamo, Ashley A. Holmes, Samuel E. Wortman, Anthony C. Yannarell Feb 2022

Post-Termination Effects Of Cover Crop Monocultures And Mixtures On Soil Inorganic Nitrogen And Microbial Communities On Two Organic Farms In Illinois, Eleanor E. Lucadamo, Ashley A. Holmes, Samuel E. Wortman, Anthony C. Yannarell

Department of Agronomy and Horticulture: Faculty Publications

Cover crops can continue to affect agricultural systems even after they have been terminated by influencing nitrogen dynamics and by altering soil microbial communities. These post-termination effects can influence soil fertility, weed pressure, and the dynamics of potential plant pathogens in the narrow window of time between cover crop termination and cash crop emergence. We evaluated the post-termination effects of 12 different spring-sown cover crop mixtures and monocultures on soil nitrogen and microbial communities on two different organic farms in Central Illinois (on Lawson silt loam soil) and Northern Illinois (on Virgil silt loam soil). In comparison to control plots …


Guidelines For Publicly Archiving Terrestrial Model Data To Enhance Usability, Intercomparison, And Synthesis, Maegen B. Simmonds, William J. Riley, Deborah A. Agarwal, Xingyuan Chen, Shreyas Cholia, Robert Crystal-Ornelas, Ethan T. Coon, Dipankar Dwivedi, Valerie C. Hendrix, Maoyi Huang, Ahmad Jan, Zarine Kakalia, Jitendra Kumar, Charles D. Koven, Li Li, Mario Melara, Lavanya Ramakrishnan, Daniel M. Ricciuto, Anthony P. Walker, Wei Zhi, Qing Zhu, Charuleka Varadharajan Feb 2022

Guidelines For Publicly Archiving Terrestrial Model Data To Enhance Usability, Intercomparison, And Synthesis, Maegen B. Simmonds, William J. Riley, Deborah A. Agarwal, Xingyuan Chen, Shreyas Cholia, Robert Crystal-Ornelas, Ethan T. Coon, Dipankar Dwivedi, Valerie C. Hendrix, Maoyi Huang, Ahmad Jan, Zarine Kakalia, Jitendra Kumar, Charles D. Koven, Li Li, Mario Melara, Lavanya Ramakrishnan, Daniel M. Ricciuto, Anthony P. Walker, Wei Zhi, Qing Zhu, Charuleka Varadharajan

Copyright, Fair Use, Scholarly Communication, etc.

Scientific communities are increasingly publishing data to evaluate, accredit, and build on published research. However, guidelines for curating data for publication are sparse for model-related research, limiting the usability of archived simulation data. In particular, there are no established guidelines for archiving data related to terrestrial models that simulate land processes and their coupled interactions with climate. Terrestrial modelers have a unique set of challenges when publishing data due to the diversity of scientific domains, research questions, and the types and scales of simulations. Researchers in the U.S. Department of Energy’s (DOE) projects use a variety of multiscale models to …


Optimizing Management Of Invasions In An Uncertain World Using Dynamic Spatial Models, Kim M. Pepin, Amy J. Davis, Rebecca S. Epanchin-Niell, Andrew M. Gormley, Joslin L. Moore, Timothy J. Smyser, H. Bradley Shaffer, William L. Kendall, Katriona Shea, Michael C. Runge, Sophie Mckee Feb 2022

Optimizing Management Of Invasions In An Uncertain World Using Dynamic Spatial Models, Kim M. Pepin, Amy J. Davis, Rebecca S. Epanchin-Niell, Andrew M. Gormley, Joslin L. Moore, Timothy J. Smyser, H. Bradley Shaffer, William L. Kendall, Katriona Shea, Michael C. Runge, Sophie Mckee

United States Department of Agriculture Wildlife Services: Staff Publications

Dispersal drives invasion dynamics of nonnative species and pathogens. Applying knowledge of dispersal to optimize the management of invasions can mean the difference between a failed and a successful control program and dramatically improve the return on investment of control efforts. A common approach to identifying optimal management solutions for invasions is to optimize dynamic spatial models that incorporate dispersal. Optimizing these spatial models can be very challenging because the interaction of time, space, and uncertainty rapidly amplifies the number of dimensions being considered. Addressing such problems requires advances in and the integration of techniques from multiple fields, including ecology, …


Practice Cost And Size Differences In Invasive Plant Management Strategies: An Empirical Analysis Of Us Great Plains States, Mazbahul G. Ahamad Feb 2022

Practice Cost And Size Differences In Invasive Plant Management Strategies: An Empirical Analysis Of Us Great Plains States, Mazbahul G. Ahamad

Department of Agronomy and Horticulture: Faculty Publications

Grassland conservation of the Conservation Stewardship Program in the United States (US) is one of the largest cost-sharing initiatives for protecting grazing land from invasive and woody plants. The practice cost and unit size of various invasive and woody plant management strategies, such as mulching, brush management, and pre- scribed burning, are different from state to state. We aimed to compare and examine the association between practice cost ($/acre[ac]) and standard unit size of practice (acre) of mulching, brush management, and pre- scribed burning strategies in nine US Great Plains states, including Kansas, Montana, Nebraska, New Mexico, North Dakota, Oklahoma, …