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Effect Of A Trace Mineral Injection On Performance And Trace Mineral Status Of Beef Cows And Calves, Carmen J. Willmore, John B. Hall, Mary E. Drewnoski Aug 2021

Effect Of A Trace Mineral Injection On Performance And Trace Mineral Status Of Beef Cows And Calves, Carmen J. Willmore, John B. Hall, Mary E. Drewnoski

Department of Animal Science: Faculty Publications

The objective was to determine the effects of an injectable trace mineral (TMI; Multimin 90) containing copper (Cu), manganese (Mn), selenium (Se), and zinc (Zn) on trace mineral status and the resulting impacts on reproduction of beef cows and the growth of their calves. Beef cows (n = 200) were assigned to receive TMI or no injection (CON) prior to calving and breeding over two consecutive years. Calves born to cows receiving TMI also received TMI at birth in both years and at 49 ± 1.3 days of age in year 1. The TMI increased (p = 0.01) liver Zn …


Impact Of Cover Crop Monocultures And Mixtures On Organic Carbon Contents Of Soil Aggregates, Daphne Topps, Imam Ul Khabir, Hagir Abdelmagid, Todd Jackson, Javed Iqbal, Boakai K. Robertson, Zahida Hassan Pervaiz, Muhammad Saleem Aug 2021

Impact Of Cover Crop Monocultures And Mixtures On Organic Carbon Contents Of Soil Aggregates, Daphne Topps, Imam Ul Khabir, Hagir Abdelmagid, Todd Jackson, Javed Iqbal, Boakai K. Robertson, Zahida Hassan Pervaiz, Muhammad Saleem

Department of Agronomy and Horticulture: Faculty Publications

Cover crops are considered an integral component of agroecosystems because of their positive impacts on biotic and abiotic indicators of soil health. At present, we know little about the impact of cover crop types and diversity on the organic carbon (OC) contents of different soil aggregate-size classes. In this study, we investigated the effect of cover plant diversity on OC contents of different soil aggregates, such as macro- (<2000–500 µm), meso- (<500–250 µm), and micro-aggregates (<250 µm). Our experiment included a total of 12 experimental treatments in triplicate; six different monoculture treatments such as chickling vetch (Vicia villosa), crimson clover (Trifolium incarnatum), hairy vetch (Vicia villosa), field peas (Pisum sativum), oilseed radish (Raphanus sativus), and mighty mustard (Brassica juncea), and their three- and six-species mixture treatments, including one unplanted control treatment. We performed this experiment usingdeep pots that contained soil collected from a corn-soybean rotation field. At vegetative maturity of cover plants (about 70 days), we took soil samples, and the soil aggregate-size classes were separated by the dry sieving. We hypothesized that cover crop type and diversity will improve OC contents of different soil aggregate-size classes. We found that cover plant species richness weakly positively increased OC contents of soil macro-aggregates (p = 0.056), whereas other aggregate-size classes did not respond to cover crop diversity gradient. Similarly, the OC contents of macroaggregates varied significantly (p = 0.013) under cover crop treatments, though neither monoculture nor mixture treatments showed significantly higher OC contents than the control treatment in this short-term experiment. Interestingly, the inclusion of hairy vetch and oilseed radish increased and decreased the OC contents of macro- and micro-aggregates, respectively. Moreover, we found a positive correlation between shoot biomass and OC contents of macroaggregates. Overall, our results suggest that species-rich rather than -poor communities may improve OC contents of soil macroaggregates, which constitute a major portion of soil systems, and are also considered as important indicators of soil functions.


Tandem Duplicate Expression Patterns Are Conserved Between Maize Haplotypes Of The Α-Zein Gene Family, Preston Hurst, James C. Schnable, David R. Holding Aug 2021

Tandem Duplicate Expression Patterns Are Conserved Between Maize Haplotypes Of The Α-Zein Gene Family, Preston Hurst, James C. Schnable, David R. Holding

Department of Agronomy and Horticulture: Faculty Publications

Tandem duplication gives rise to copy number variation and subsequent functional novelty among genes as well as diversity between individuals in a species. Functional novelty can result from either divergence in coding sequence or divergence in patterns of gene transcriptional regulation. Here, we investigate conservation and divergence of both gene sequence and gene regulation between the copies of the α-zein gene family in maize inbreds B73 and W22. We used RNA-seq data generated from developing, self-pollinated kernels at three developmental stages timed to coincide with early and peak zein expression. The reference genome annotations for B73 and W22 were modified …


Weight Status Perceptions And Food Choice, Christopher R. Gustafson Aug 2021

Weight Status Perceptions And Food Choice, Christopher R. Gustafson

Cornhusker Economics

Does your weight status—whether your height and weight put you into the normal weight, overweight, or obese category—predict your food choices, or even the types of food you’ll pay attention to when making a choice? What about the weight status you perceive yourself to be? These are important questions because the percentage of the population that is overweight or obese in the U.S.—and world-wide—has been increasing for decades despite a wide range of efforts aimed at slowing/reversing its growth. In the U.S., over 70 percent of the population is overweight or obese. High body weight has numerous consequences for individuals …


Associations Between Community Built Environments With Early Care And Education Classroom Physical Activity Practices And Barriers, Bethany D. Williams, Susan B. Sisson, Dipti Dev, Bryce Lowery, Diane Horm, Janis Campbell, Denise Finneran, Jennifer Graef-Downard, Linda Whaley Aug 2021

Associations Between Community Built Environments With Early Care And Education Classroom Physical Activity Practices And Barriers, Bethany D. Williams, Susan B. Sisson, Dipti Dev, Bryce Lowery, Diane Horm, Janis Campbell, Denise Finneran, Jennifer Graef-Downard, Linda Whaley

Department of Child, Youth, and Family Studies: Faculty Publications

The influence of community-built environments on physical activity (PA) support in Early Childhood Education settings (ECEs) is unknown. The purpose of this cross-sectional study was to determine associations between community PA environments and ECE classroom PA practices. We included licensed Oklahoma ECE directors serving 3-to-5-year-old children. Parks and playground locations were exported from Google Earth. NationalWalkability Index was derived from 2010 US Census data. ArcMap 10.6 was used to geocode ECE locations, which were within an Activity Desert if no parks/playgrounds were located within a 1-mile radius or if Walkability Index was 10.5 or below. Classroom PA practices were determined …


Classifying Ingestive Behavior Of Dairy Cows Via Automatic Sound Recognition, Guoming Li, Yijie Xiong, Qian Du, Zhengxiang Shi, Richard S. Gates Aug 2021

Classifying Ingestive Behavior Of Dairy Cows Via Automatic Sound Recognition, Guoming Li, Yijie Xiong, Qian Du, Zhengxiang Shi, Richard S. Gates

Department of Animal Science: Faculty Publications

Determining ingestive behaviors of dairy cows is critical to evaluate their productivity and health status. The objectives of this research were to (1) develop the relationship between forage species/heights and sound characteristics of three different ingestive behaviors (bites, chews, and chew-bites); (2) comparatively evaluate three deep learning models and optimization strategies for classifying the three behaviors; and (3) examine the ability of deep learning modeling for classifying the three ingestive behaviors under various forage characteristics. The results show that the amplitude and duration of the bite, chew, and chew-bite sounds were mostly larger for tall forages (tall fescue and alfalfa) …


The Ovarian Follicle Of Ruminants: The Path From Conceptus To Adult, Jennifer L. Juengel, Robert A. Cushman, Joëlle Dupont, Stéphane Fabre, Richard G. Lea, Graeme B. Martin, Francesca Mossa, Janet L. Pitman, Christopher A. Price, Peter Smith Aug 2021

The Ovarian Follicle Of Ruminants: The Path From Conceptus To Adult, Jennifer L. Juengel, Robert A. Cushman, Joëlle Dupont, Stéphane Fabre, Richard G. Lea, Graeme B. Martin, Francesca Mossa, Janet L. Pitman, Christopher A. Price, Peter Smith

Roman L. Hruska U.S. Meat Animal Research Center: Reports

This review resulted from an international workshop and presents a consensus view of critical advances over the past decade in our understanding of follicle function in ruminants. The major concepts covered include: (1) the value of major genes; (2) the dynamics of fetal ovarian development and its sensitivity to nutritional and environmental influences; (3) the concept of an ovarian follicle reserve, aligned with the rise of anti-Müllerian hormone as a controller of ovarian processes; (4) renewed recognition of the diverse and important roles of theca cells; (5) the importance of follicular fluid as a microenvironment that determines oocyte quality; (6) …


Examining Correlates Of Feeding Practices Among Parents Of Preschoolers, Deepa Srivastava, Lucy R. Zheng, Dipti Dev Aug 2021

Examining Correlates Of Feeding Practices Among Parents Of Preschoolers, Deepa Srivastava, Lucy R. Zheng, Dipti Dev

Department of Child, Youth, and Family Studies: Faculty Publications

Background: Parent feeding practices play a critical role in children’s eating behaviors. Limited research has explored child-level correlates of parent feeding practices.

Aim: To identify correlates of feeding practices (responsive and controlling) among parents of preschoolers in the United States.

Methods: Participants included parents (n = 273) of preschoolers (3–5 years), recruited from early care and education settings (n = 24) located in a metropolitan city in the US. Analysis included descriptives, correlations, and multiple regression.

Results: For responsive feeding practices, positive associations included child’s weight with unintentional modeling (β = .17, 95% CI [0.12, 0.53]), child vegetable …


Nebline, August 2021 Aug 2021

Nebline, August 2021

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

The Myths & Facts of Head Lice

Coping with Picky Eating

Recipes of the Month

6 Common Composting Questions

Garden Guide: Things to do this Month

Tips for a Fun and Educational Day at the Fair

Kissing Bugs in Nebraska

Lancaster County Super Fair, July 29-Aug. 7, 2021

Heart of 4-H Volunteer Award

4-H Teen Council Invites New Members

4-H Gold Tournament Fundraiser, Oct. 3

4-H’ers Test Family and Consumer Science Skills at Life Challenge

4-H Clover College: 48 Workshops of Hands-on Learning!

4-H’ers Test Their Knowledge of Animals and Decision-Making Skills at PASE

4-H District Horse Results

4-H Announcements …


Synthesizing Inactivation Efficacy Of Treatments Against Bacillus Cereus Through Systematic Review And Meta-Analysis And Evaluating Inactivation Efficacy Of Commercial Cleaning Products Against B. Cereus Biofilms And Spores Using Standardized Methods, Minho Kim Aug 2021

Synthesizing Inactivation Efficacy Of Treatments Against Bacillus Cereus Through Systematic Review And Meta-Analysis And Evaluating Inactivation Efficacy Of Commercial Cleaning Products Against B. Cereus Biofilms And Spores Using Standardized Methods, Minho Kim

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Bacillus cereus is ubiquitous and can be easily carried in food processing facilities. It is problematic because it can survive various treatments such as heat, radiation, and chemical cleaning by forming spores and biofilms. Some review papers have discussed inactivation efficacies of different treatments against B. cereus, but they are narrative without quantitative summaries. This study first aimed to find effective and food industry-applicable treatment candidates against B. cereus spores and biofilms by synthesizing and comparing the efficacy of treatments using systematic review and meta-analysis. After screening, 17 studies were included, but only nine studies were used for meta-analysis …


Studies On Milling And Baking Quality And In Vitro Protein Digestibility Of Historical And Modern Wheats, Sujun Liu Aug 2021

Studies On Milling And Baking Quality And In Vitro Protein Digestibility Of Historical And Modern Wheats, Sujun Liu

Department of Food Science and Technology: Dissertations, Theses, and Student Research

There is considerable controversy among the public and the scientific community about whether modern wheats are harmful for human health and responsible for the increase of Celiac disease compared with historical varieties. Therefore, the milling and baking quality, protein digestibility, and protein composition of historical and modern wheats adapted to the Great Plains of the US were evaluated in this thesis. One objective of this thesis was to determine how end-use quality of wheat changed with wheat cultivar release year. Kernel physical characteristics, milling yield, whole-wheat flour quality, flour protein content, mixing quality and baking quality of 23 hard winter …


Development Of High Value Oil Traits Using The Model Oilseed Crop Camelina Sativa, Evan Updike Aug 2021

Development Of High Value Oil Traits Using The Model Oilseed Crop Camelina Sativa, Evan Updike

Department of Biochemistry: Dissertations, Theses, and Student Research

Plant oils are an important source of food, fuel, and feed in our society today. The oil found in the seeds of plants is composed almost entirely of triacylglycerol (TAG) molecules, which consist of three fatty acids esterified to a glycerol backbone. As crude oil supplies decline, vegetable oils are gaining traction as a renewable substitute to petroleum-based materials in fuels, lubricants, and specialty oleochemicals. However, as it currently stands vegetable oils do not possess the properties necessary to fill the void of a petroleum free world.

To address this problem, plant biotechnologists have done extensive work on genetic engineering …


Characterization Of Sphingolipid Biosynthesis And Modification In Plants, Dongdong Zhang Aug 2021

Characterization Of Sphingolipid Biosynthesis And Modification In Plants, Dongdong Zhang

Department of Biochemistry: Dissertations, Theses, and Student Research

Sphingolipids are ubiquitous membrane lipids in eukaryotic cells. Ceramides, the backbone of sphingolipids, are synthesized by ceramide synthases (CerSs), which form amide bonds between long-chain bases (LCBs) and the acyl groups of acyl-CoAs. Class I CerS works predominantly towards C16-CoA, whereas Class II CerS works towards C24-CoA. Plant sphingolipids generally have 16-carbon and 24-carbon as the major acyl groups. However, the sphingolipids of Oryza sativa and Zea mays have 20-carbon and 24-carbon as the predominant acyl groups. This dissertation aims to understand the substrate preference of CerSs in monocots such as rice. Phylogenetic analysis shows the Class I CerSs from …


Nicarbazin As An Oral Contraceptive In Eared Doves, Lourdes Olivera, Silvia Pereyra, Georgget Banchero, Guillermo Tellechea, Jorge Sawchik, Michael L. Avery, Ethel Rodríguez Aug 2021

Nicarbazin As An Oral Contraceptive In Eared Doves, Lourdes Olivera, Silvia Pereyra, Georgget Banchero, Guillermo Tellechea, Jorge Sawchik, Michael L. Avery, Ethel Rodríguez

United States Department of Agriculture Wildlife Services: Staff Publications

Eared doves (Zenaida auriculata) are responsible for substantial losses in cereal and oil crops as well as in dairy and feedlot production in the southern cone of South America. Various strategies have been shown to be effective in reducing damage at the farm scale, but in some scenarios, it is necessary to also incorporate population control methods due to excessive bird population size. An alternative approach to reduce pest bird populations is the use of contraceptive methods, minimizing the impact on the environment and non-target populations. Nicarbazin is registered in the United States as a contraceptive for Branta …


The Sulfur Microbial Diet And Risk Of Colorectal Cancer By Molecular Subtypes And Intratumoral Microbial Species In Adult Men, Daniel R. Sikavi, Long H. Nguyen, Koichiro Haruki, Tomotaka Ugai, Wenjie Ma, Dong D. Wang, Kelsey N. Thompson, Yan Yan, Tobyn Branck, Jeremy E. Wilkinson, Naohiko Akimoto, Rong Zhong, Mai Chan Lau, Kosuke Mima, Keisuke Kosumi, Teppei Morikawa, Eric B. Rimm, Wendy S. Garrett, Jacques Izard, Yin Cao, Mingyang Song, Curtis Huttenhower, Shuji Ogino, Andrew T. Chan Aug 2021

The Sulfur Microbial Diet And Risk Of Colorectal Cancer By Molecular Subtypes And Intratumoral Microbial Species In Adult Men, Daniel R. Sikavi, Long H. Nguyen, Koichiro Haruki, Tomotaka Ugai, Wenjie Ma, Dong D. Wang, Kelsey N. Thompson, Yan Yan, Tobyn Branck, Jeremy E. Wilkinson, Naohiko Akimoto, Rong Zhong, Mai Chan Lau, Kosuke Mima, Keisuke Kosumi, Teppei Morikawa, Eric B. Rimm, Wendy S. Garrett, Jacques Izard, Yin Cao, Mingyang Song, Curtis Huttenhower, Shuji Ogino, Andrew T. Chan

Department of Food Science and Technology: Faculty Publications

Introduction: We recently described the sulfur microbial diet, a pattern of intake associated with increased gut sulfur-metabolizing bacteria and incidence of distal colorectal cancer (CRC). We assessed whether this risk differed by CRC molecular subtypes or presence of intratumoral microbes involved in CRC pathogenesis (Fusobacterium nucleatum and Bifidobacterium spp.).

Methods: We performed Cox proportional hazards modeling to examine the association between the sulfur microbial diet and incidence of overall and distal CRC by molecular and microbial subtype in the Health Professionals Follow-Up Study (1986-2012).

Results: We documented 1,264 incident CRC cases among 48,246 men, approximately 40% …


Sars-Cov-2 Concentrations In A Wastewater Collection System Indicated Potential Covid-19 Hotspots At The Zip Code Level, Renys E. Barrios, Chin Lim, Megan S. Kelley, Xu Li Aug 2021

Sars-Cov-2 Concentrations In A Wastewater Collection System Indicated Potential Covid-19 Hotspots At The Zip Code Level, Renys E. Barrios, Chin Lim, Megan S. Kelley, Xu Li

Department of Nutrition and Health Sciences: Faculty Publications

Wastewater based epidemiology (WBE) has been successfully applied for SARS-CoV-2 surveillance at the city and building levels. However, sampling at the city level does not provide sufficient spatial granularity to identify COVID-19 hotspots, while data from building-level sampling are too narrow in scope for broader public health application. The objective of this study was to examine the feasibility of using wastewater from wastewater collection systems (WCSs) to monitor COVID-19 hotspots at the zip code level. In this study, 24-hr composite wastewater samples were collected from five manholes and two wastewater treatment plants (WWTPs) in the City of Lincoln, Nebraska. By …


The Role Of Fatty Acids In Ruminant Diets And Novel Feed Ingredients High In Omega-3 Fatty Acids Fed In Feedlot Diets, Mitchell M. Norman Aug 2021

The Role Of Fatty Acids In Ruminant Diets And Novel Feed Ingredients High In Omega-3 Fatty Acids Fed In Feedlot Diets, Mitchell M. Norman

Department of Animal Science: Dissertations, Theses, and Student Research

A finishing study evaluated the performance, carcass characteristics and fatty acid profiles of steers fed four inclusions of a novel feedstuff Green Grass. Green Grass is a product comprised of sesame meal, giant kelp, cassava, and sorghum containing high concentrations of polyunsaturated fatty acids. No differences were observed in initial BW, final BW, BW gain, HCW, LM area, 12th rib fat depth, calculated YG, or liver abscess %. Dry matter intake linearly increased as Green Grass inclusion increased in the diet. Steers fed Green Grass had lower G:F than control cattle, and steers fed 30% Green Grass had a …


Low-Oxygen Dry Aging Of Beef, Joseph A. Sonderman Aug 2021

Low-Oxygen Dry Aging Of Beef, Joseph A. Sonderman

Department of Animal Science: Dissertations, Theses, and Student Research

The objective of this research project was to determine the effects of removing oxygen from the beef dry aging process. Boneless upper 2/3 Choice beef strip loins (n = 18) were randomly assigned to three aging treatments: wet aging, traditional (aerobic) dry aging, and low-oxygen dry aging. All treatments were aged for 41 days at 2 ± 1°C. The dry-aged treatments were held at 50% relative humidity (RH) with a fan speed of 2,200 revolutions per minute (RPM). Low-oxygen dry-aged samples were aged in chambers housed within an oxygen impermeable film bubble. After aging, yield was determined for the …


Estimation Of Breed Effects And Genetic Parameters For Age At Slaughter And Days To Finish In A Multibreed Beef Cattle Population, Lindsay Rae Upperman Aug 2021

Estimation Of Breed Effects And Genetic Parameters For Age At Slaughter And Days To Finish In A Multibreed Beef Cattle Population, Lindsay Rae Upperman

Department of Animal Science: Dissertations, Theses, and Student Research

Cattle efficiency during the finishing phase is a crucial factor in determining profit in the beef cattle industry. Economically relevant traits associated with efficient production include age at slaughter (AAS) and days to finish (DtF). Selection to reduce the number of days an animal takes to reach a finish endpoint would ultimately reduce production costs, increase net profits, and result in a more sustainable production system. However, most harvested animals are from commercial herds, necessitating the use of indicator traits from seedstock animals for selection. Potential indicator traits include ultrasound measurements that could be genetically correlated to DtF traits. The …


Afterschool Club: German For K-5, Justin Solheim Jul 2021

Afterschool Club: German For K-5, Justin Solheim

Honors Program: Expanded Learning Clubs

The lessons found in this paper were designed for a group of 20-25 elementary schools students in downtown Lincoln, NE. The students were split into two groups: K-2 and 3-5. Through a variety of activities, the students learned the basics of the German language and culture. Many of the lessons are simple and do not require difficult thinking, as this was a summer club. Instead, they allow students to collaborate, move around, color, and solve puzzles.


Super Solar, William Wilton Jul 2021

Super Solar, William Wilton

Honors Program: Expanded Learning Clubs

No abstract provided.


The Impacts Of Cover Crops Species And Termination Dates On Arthropod Activity In A Corn Production System, Julia N.D. Campos Jul 2021

The Impacts Of Cover Crops Species And Termination Dates On Arthropod Activity In A Corn Production System, Julia N.D. Campos

Department of Entomology: Dissertations, Theses, and Student Research

Cover crops can reduce soil erosion, increase water infiltration, and provide an alternative strategy for weed management in cropping systems. Cover crops change the landscape composition by increasing plant biodiversity, potentially impacting pests and beneficial insects. Ecological principles suggest that cover crop management can influence the arthropods in the subsequent cash crop. However, the impact of management strategies such as cover crop species and termination date on arthropod activity in corn systems is not well understood. The objective of this study was to determine the impact of grass cover crop species (wheat, cereal rye, and triticale) in combination with four …


Pre-Milling Interventions For Improving The Microbiological Quality Of Wheat, Shpresa Musa Jul 2021

Pre-Milling Interventions For Improving The Microbiological Quality Of Wheat, Shpresa Musa

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Development of pre-milling intervention strategies to improve the microbial quality of wheat and wheat-based products is an emerging concern for the food industry. When steam tempering conditions for hard and soft wheat were applied, the microbial population associated with the grain was significantly reduced compared to controls. Further reductions were observed when acid was applied as part of the intervention which is an added benefit since the addition of a tempering solution is required for both wheat classes since the desired milling moisture cannot be reached by applying steam alone. On average, the highest reductions for hard wheat were achieved …


Effect Of Radiofrequency Assisted Thermal Processing On The Structural, Functional And Biological Properties Of Egg White Powder, Alisha Kar Jul 2021

Effect Of Radiofrequency Assisted Thermal Processing On The Structural, Functional And Biological Properties Of Egg White Powder, Alisha Kar

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Radiofrequency (RF) assisted thermal processing is a novel and energy-efficient method used for pasteurization, which heats the product volumetrically as opposed to traditional hot room (HR) pasteurization. RF-assisted thermal processing accelerates the heating rate of egg white powder (EWP), which has a low thermal conductivity and further affect its gelling properties. The effect of processing methods (RF and HR) due to pH and treatment temperature combination was monitored by subjecting neutral EWP (6.4 pH) to 70 and 80 ℃ and alkaline EWP (pH 9.9) samples to 70 ℃ over 0, 5, 10, 15 and 20 d. At 80 ℃ and …


Characterization Of Western Corn Rootworm (Coleoptera: Chrysomelidae) Susceptibility To Foliar Insecticides In Northeast Nebraska, Timothy B. Dang Jul 2021

Characterization Of Western Corn Rootworm (Coleoptera: Chrysomelidae) Susceptibility To Foliar Insecticides In Northeast Nebraska, Timothy B. Dang

Department of Entomology: Dissertations, Theses, and Student Research

The western corn rootworm (WCR), Diabrotica virgifera virgifera LeConte (Coleoptera: Chrysomelidae), is a major pest of maize in the United States. A variety of tactics are used to manage this pest such as crop rotation, insecticides, and transgenic maize expressing insecticidal proteins from Bacillus thuringiensis (Bt). WCR populations are highly adaptive and have evolved resistance to these management tactics. Management options are limited as few new tactics are available. Research is needed to evaluate the value of existing tactics used within an integrated framework to manage densities/injury and mitigate resistance.

This study evaluated the field performance of formulated foliar insecticides …


Metabolic Modeling And Omics-Integrative Analysis Of Single And Multi-Organism Systems: Discovery And Redesign, Mohammad Mazharul Islam Jul 2021

Metabolic Modeling And Omics-Integrative Analysis Of Single And Multi-Organism Systems: Discovery And Redesign, Mohammad Mazharul Islam

Department of Chemical and Biomolecular Engineering: Dissertations, Theses, and Student Research

Computations and modeling have emerged as indispensable tools that drive the process of understanding, discovery, and redesign of biological systems. With the accelerating pace of genome sequencing and annotation information generation, the development of computational pipelines for the rapid reconstruction of high-quality genome-scale metabolic networks has received significant attention. These models provide a rich tapestry for computational tools to quantitatively assess the metabolic phenotypes for various systems-level studies and to develop engineering interventions at the DNA, RNA, or enzymatic level by careful tuning in the biophysical modeling frameworks. in silico genome-scale metabolic modeling algorithms based on the concept of optimization, …


Bovine Mammary Alveolar Mac-T Cells Afford A Tool For Studies Of Bovine Milk Exosomes In Drug Delivery, Mojisola Ogunnaike Jul 2021

Bovine Mammary Alveolar Mac-T Cells Afford A Tool For Studies Of Bovine Milk Exosomes In Drug Delivery, Mojisola Ogunnaike

Department of Nutrition and Health Sciences: Dissertations, Theses, and Student Research

Bovine milk exosomes (BMEs) have attracted attention as vehicles for delivering RNA therapeutics. BMEs originate in mammary alveolar cells. Here, we determined whether bovine mammary alveolar MAC-T cells are a promising tool to assess RNA delivery by BMEs. MAC-T cells exosomes (MAC-T BMEs) and BMEs were harvested by differential ultracentrifugation. Exosome size, morphology, microRNA content and marker proteins were assessed using nanoparticle tracking analysis, transmission electron microscopy, real-time PCR and immunoblot analysis, respectively. MAC-T cells were genetically engineered to secrete MAC-T BMEs endogenously labeled with a near-infrared fluorescent protein and tissue distribution was compared to fluorophore-labeled BMEs following intravenous injection …


Ruminant Milk-Derived Extracellular Vesicles: A Nutritional And Therapeutic Opportunity?, Siew Ling Ong, Cherie Blenkiron, Stephen Haines, Alejandra Acevedo-Fani, Juliana A.S. Leite, Janos Zempleni, Rachel C. Anderson, Mark J. Mccann Jul 2021

Ruminant Milk-Derived Extracellular Vesicles: A Nutritional And Therapeutic Opportunity?, Siew Ling Ong, Cherie Blenkiron, Stephen Haines, Alejandra Acevedo-Fani, Juliana A.S. Leite, Janos Zempleni, Rachel C. Anderson, Mark J. Mccann

Department of Nutrition and Health Sciences: Faculty Publications

Milk has been shown to contain a specific fraction of extracellular particles that are reported to resist digestion and are purposefully packaged with lipids, proteins, and nucleic acids to exert specific biological effects. These findings suggest that these particles may have a role in the quality of infant nutrition, particularly in the early phase of life when many of the foundations of an infant’s potential for health and overall wellness are established. However, much of the current research focuses on human or cow milk only, and there is a knowledge gap in how milk from other species, which may be …


Cerebrum, Liver, And Muscle Regulatory Networks Uncover Maternal Nutrition Effects In Developmental Programming Of Beef Cattle During Early Pregnancy, Wellison J.S. Diniz, Matthew S. Crouse, Robert A. Cushman, Kyle J. Mclean, Joel S. Caton, Carl R. Dahlen, Lawrence P. Reynolds, Alison K. Ward Jul 2021

Cerebrum, Liver, And Muscle Regulatory Networks Uncover Maternal Nutrition Effects In Developmental Programming Of Beef Cattle During Early Pregnancy, Wellison J.S. Diniz, Matthew S. Crouse, Robert A. Cushman, Kyle J. Mclean, Joel S. Caton, Carl R. Dahlen, Lawrence P. Reynolds, Alison K. Ward

Roman L. Hruska U.S. Meat Animal Research Center: Reports

The molecular basis underlying fetal programming in response to maternal nutrition remains unclear. Herein, we investigated the regulatory relationships between genes in fetal cerebrum, liver, and muscle tissues to shed light on the putative mechanisms that underlie the effects of early maternal nutrient restriction on bovine developmental programming. To this end, cerebrum, liver, and muscle gene expression were measured with RNA-Seq in 14 fetuses collected on day 50 of gestation from dams fed a diet initiated at breeding to either achieve 60% (RES, n= 7) or 100% (CON, n= 7) of energy requirements. To build a tissue-to-tissue gene network, we …


Production Performance Of Cows Raised With Different Postweaning Growth Patterns, Harvey C. Freetly, Robert A. Cushman, Gary L. Bennett Jul 2021

Production Performance Of Cows Raised With Different Postweaning Growth Patterns, Harvey C. Freetly, Robert A. Cushman, Gary L. Bennett

Roman L. Hruska U.S. Meat Animal Research Center: Reports

The period of heifer development is a relatively small fraction of a cow's life; however, her pattern of growth may have permanent effects on her productivity as a cow. We hypothesized that altering the growth pattern during the peri-pubertal period would increase life-time productivity across genetic types of Bos taurus cows. The objective was to determine the stayability, calf production, and weight of calf weaned across six calf crops. Heifers (n = 685) were placed on one of two developmental programs at 256 ± 1 d of age. Control heifers received a diet that provided 228 kcal ME·(body weight [BW], …