Digital Commons Network^™

Summer Habitat Use And Movements Of Invasive Wild Pigs (Sus Scrofa) In Canadian Agro-Ecosystems, Corey J. Kramer, Melanie R. Boudreau, Ryan S. Miller, Ryan Powers, Kurt C. Vercauteren, Ryan K. Brook

United States Department of Agriculture Wildlife Services: Staff Publications

Resource selection informs understanding of a species’ ecology and is especially pertinent for invasive species. Since introduced to Canada, wild pigs (Sus scrofa Linnaeus, 1978) remain understudied despite recognized negative impacts on native and agricultural systems globally. Elsewhere in North America, pigs typically use forests and forage in agricultural crops. We hypothesized Canadian wild pigs would behave similarly, and using GPS locations from 15 individuals, we examined diel and seasonal resource selection and movement in the Canadian prairie region. Forests were predominately selected during the day, while corn (Zea mays L.), oilseeds, and wheat (Triticum aestivum L.) …

Ontario’S Double-Crested Cormorant Hunting Season May Be Ineffective But That Doesn’T Mean There Are No Conflict Issues, Brian S. Dorr, David G. Fielder, James R. Jackson, James F. Farquhar, Douglas W. Schultz, Randall M. Claramunt

United States Department of Agriculture Wildlife Services: Staff Publications

No abstract provided.

Influence Of Landscape Attributes On Virginia Opossum Density, David A. Bernasconi, Wesley C. Dixon, Matthew T. Hamilton, James L. Helton, Richard B. Chipman, Amy T. Gilbert, James C. Beasley, Olin E. Rhodes Jr., Guha Dharmarajan

United States Department of Agriculture Wildlife Services: Staff Publications

TheVirginia opossum (Didelphis virginiana), North America's only marsupial, has a range extending from southern Ontario, Canada, to the Yucatan Peninsula, Mexico, and from the Atlantic seaboard to the Pacific. Despite the Virginia opossum's taxonomic uniqueness in relation to other mammals in North America and rapidly expanding distribution, its ecology remains relatively understudied. Our poor understanding of the ecology of this important mesopredator is especially pronounced in the rural southeastern United States. Our goal was to estimate effects of habitat on opossum density within an extensive multiyear spatial capture‐recapture study. Additionally, we compared the results of this spatial capture‐recapture …

Managing Roof Rats In Citrus Orchards: Initial Efforts Toward Building An Integrated Pest Management Program, Roger A. Baldwin, Justine A. Smith, Ryan Meinerz, Aaron B. Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Roof rats cause extensive damage in orchards throughout the world. Integrated Pest Management (IPM) systems are the best option for managing rodents, yet few management systems have been developed and tested to control roof rats in agricultural settings. We initiated a study in 2020 to provide the foundation for an IPM program to manage roof rats in California citrus orchards. Our initial efforts centered on developing effective monitoring strategies for roof rats to determine when management actions are needed, assessing rat movement patterns to determine proper placement of management tools, and conducting initial tests of Goodnature A24 self-resetting traps and …

Development Of A Novel Vertebrate Pesticide For The Invasive Small Indian Mongoose, Carmen Antaky, Steven C. Hess, Israel Leinbach, Robert T. T. Sugihara, Emily W. Ruell, Shane Siers

United States Department of Agriculture Wildlife Services: Staff Publications

Small Indian mongooses are detrimental introduced predators in the United States, where they depredate native species, serve as vector of disease, and threaten public safety. Due to the risk of accidental introduction to mongoose-free islands, high cost and limitations to trapping, and no national (Section 3) Environmental Protection Agency (EPA)-registered toxicants for mongoose control, there is a need for an efficacious toxic bait for mongooses for use in conservation areas and at points of entry in the United States. Over the last five years, the National Wildlife Research Center (NWRC) worked to develop a toxic bait for mongooses for registration …

Evidence For Irruptive Fluctuation In Axis Deer Of Hawai‘I, Steven C. Hess, Jonathan Sprague, Jacob Muise

United States Department of Agriculture Wildlife Services: Staff Publications

Axis deer on the Hawaiian Islands of Maui, Lāna‘i, and Moloka‘i simultaneously experienced one of the most dramatic population crashes on record in 2020-2021, which coincided with extended drought conditions and prompted an emergency declaration for these islands. This phenomenon has been anecdotally documented during previous drought events in 2011-2012, but never formally studied. Newspaper articles document abundant deer becoming a nuisance to agriculture and natural resources, and then experiencing high mortality during droughts. This phenomenon fits Caughley’s (1970) operational definition of eruptive (sic) fluctuation “…as an increase in numbers over at least two generations, followed by a marked decline.” …

Abert’S Squirrel Management In Support Of Endangered Mount Graham Red Squirrel Recovery In Arizona, Aaron R. Morehead, Christopher Carillo, Holly Hicks, Wade Sanders, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

Recovery of the endangered Mount Graham red squirrel (MGRS) will likely be long and challenging. Its limited habitat, isolation to Pinaleño Mountain range, and demographic characteristics restrict its ability to rebound quickly from threats that impact both the squirrel and its habitat. Currently, threats to the MGRS include habitat degradation and loss through high-severity wildfire, fire suppression activities, insect outbreaks, climate change, and human development, and predation, as well as competition with Abert’s squirrels. The most recent wildfire in 2017 impacted over 48,000 acres of already reduced habitat. A critical first step is to protect and manage the remaining population …

Predation Thresholds For Reintroduction Of Native Avifauna Following Suppression Of Invasive Brown Treesnakes On Guam, Robert M. Mcelderry, Eben H. Paxton, Andre V. Nguyen, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

The brown treesnake (BTS) (Boiga irregularis) invasion on Guåhan (in English, Guam) led to the extirpation of nearly all native forest birds. In recent years, methods have been developed to reduce BTS abundance on a landscape scale. To help assess the prospects for the successful reintroduction of native birds to Guåhan following BTS suppression, we modeled bird population persistence based on their life history characteristics and relative sensitivity to BTS predation. We constructed individual-based models and simulated BTS predation in hypothetical founding populations for each of seven candidate bird species. We represented BTS predation risk in two steps: …

Migratory Movements And Home Ranges Of Geographically Distinct Wintering Populations Of A Soaring Bird, Ryo Ogawa, J. Brian Davis, D. Tommy King, L. Wes Burger, Bronson K. Strickland, Marsha A. Sovada, Guiming Wang, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Migratory soaring birds exhibit spatiotemporal variation in their circannual movements. Nevertheless, it remains uncertain how different winter environments affect the circannual movement patterns of migratory soaring birds. Here, we investigated annual movement strategies of American white pelicans Pelecanus erythrorhynchos (hereafter, pelican) from two geographically distinct wintering grounds in the Southern and Northern Gulf of Mexico (GOM).We hypothesized that hourly movement distance and home range size of a soaring bird would differ between different geographic regions because of different thermals and wind conditions and resource availability. We calculated average and maximum hourly movement distances and seasonal home ranges of GPS-tracking pelicans. …

Susceptibility Of Wild Canids To Sars-Cov-2, Stephanie M. Porter, Aim E. Hartwig, Helle Bielefeldt-Ohmann, Angela M. Bosco-Lauth, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

We assessed 2 wild canid species, red foxes (Vulpes vulpes) and coyotes (Canis latrans), for susceptibility to SARS-CoV-2. After experimental inoculation, red foxes became infected and shed infectious virus. Conversely, experimentally challenged coyotes did not become infected; therefore, coyotes are unlikely to be competent hosts for SARS-CoV-2.

Throughout the COVID-19 pandemic, multiple instances of natural infections with SARS-CoV-2 have been reported in pet dogs, likely after exposure to an infected human (1–3). Domestic dogs appear to be minimally susceptible to SARS-CoV-2, as indicated by experimental inoculations resulting in reverse transcription PCR–positive samples and low titer antibody responses but no clinical …

Exploring The Value Of A Global Gene Drive Project Registry, Riley I. Taitingfong, Antoinette J. Piaggio, Cinnamon S. Bloss, Et Al.

United States Department of Agriculture Wildlife Services: Staff Publications

Recent calls to establish a global project registry before releasing any gene-drive-modified organisms (GDOs) have suggested a registry could be valuable to coordinate research, collect data to monitor and evaluate potential ecological impacts, and facilitate transparent communication with community stakeholders and the general public. Here, we report the results of a multidisciplinary expert workshop on GDO registries convened on 8–9 December 2020 involving 70 participants from 14 countries. Participants had expertise in gene drive design, conservation and population modeling, social science, stakeholder engagement, governance and regulation, international policy, and vector control; they represented 45 organizations, spanning national and local governmental …

Multidisciplinary Engagement For Fencing Research Informs Efficacy And Rancher-To-Researcher Knowledge Exchange, Matthew Hyde, Stewart W. Breck, Alex Few, Jared Beaver, Joshua Schrecengost, Jim Stone, Cameron Krebs, Russell Talmo, Kari Eneas, Rae Nickerson, Kyran E. Kunkel, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Across much of the Western United States, recovery of large carnivore populations is creating new challenges for livestock producers. Reducing the risks of sharing the landscape with recovering wildlife populations is critical to private working lands, which play an vital role in securing future energy, water, food, and fiber for an ever-expanding human population. Fencing is an important mitigation practice that many ranchers, land managers, and conservationists implement to reduce carnivore-livestock conflict. While fencing strategies have been reviewed in the literature, research seldom incorporates knowledge from the people who utilize fencing the most (i.e., livestock producers). Incorporating producers and practitioners …

Conserving Endangered Black-Footed Ferrets: Biological Threats, Political Challenges, And Lessons Learned, Travis M. Livieri, Steven C. Forrest, Marc R. Matchett, Stewart Breck

United States Department of Agriculture Wildlife Services: Staff Publications

There may be few stories in the annals of wildlife management that are as dramatic as the near demise and comeback of the black-footed ferret (Mustela nigripes). Endemic only to North America, this charming little carnivore found only in the continent’s central grasslands was hardly known to science until the mid-20th century. By then, vast colonies of the prey it depended on for food and shelter, the prairie dog (Cynomys spp.), had been wiped out through disease (sylvatic plague) and an agricultural industry with little tolerance for burrowing and grazing rodents. At its low point, the species’ …

Research On High-Rap Mixtures With Rejuvenator - Field Implementation, Nitish R. Bastola, Mahdieh Khedmati, Hamzeh Haghshenas

Nebraska Department of Transportation: Research Reports

The use of Rejuvenating Agents (RAs), as Recycled Asphalt Pavement (RAP) modifiers, has been increasing over the past years. However, the field performance of asphalt mixtures containing high-RAP materials and modified with RAs has raised some concerns regarding the long-term performance of RAs. This study evaluated the laboratory and field performance of high-RAP mixtures with and without bio-oil RA. Three sets of plant-produced specimens were collected: 1) laboratory-compacted; 2) field-compacted and cored after paving; and 3) field-compacted and cored after one and two years. The Hamburg Wheel Tracking (HWT) test was used to evaluate the specimens' resistance to rutting and …

The Smooth 4-Genus Of (The Rest Of) The Prime Knots Through 12 Crossings, Mark Brittenham, Susan Hermiller

Department of Mathematics: Faculty Publications

We compute the smooth 4-genera of the prime knots with 12 crossings whose values, as reported on the KnotInfo website, were unknown. This completes the calculation of the smooth 4-genus for all prime knots with 12 or fewer crossings.

Spin-Dependent Electronic Transport In Noncollinear Antiferromagnetic Antiperovskites, Gautam Gurung

Department of Physics and Astronomy: Dissertations, Theses, and Student Research

Spin-dependent properties are the heart of spintronic devices. Spintronics exploits electron’s spin, in addition to charge, to process and store the information. Recently, antiferromagnetic (AFM) spintronics has emerged as a subfield of spintronics, where an AFM order parameter (the Néel vector) is exploited to control spin-dependent transport properties. Due to being robust against magnetic perturbations, producing no stray fields, and exhibiting ultrafast dynamics, antiferromagnets can serve as promising functional materials for spintronic applications.

Among antiferromagnets, high Néel temperature noncollinear antiperovskites ANMn₃ (A = Ga, Ni, Sn, and Pt) are interesting due to their magnetic group symmetry supporting non-trivial spin-dependent …

Sustainable Irrigation Based On Co-Regulation Of Soil Water Supply And Atmospheric Evaporative Demand, Jingwen Zhang, Kaiyu Guan, Bin Peng, Ming Pan, Wang Zhou, Chongya Jiang, Hyungsuk Kimm, Trenton E. Franz, Robert F. Grant, Yi Yang, Daran R. Rudnick, Derek M. Heeren, Andrew E. Suyker, William L. Bauerle, Grace L. Miner

School of Natural Resources: Faculty Publications

Irrigation is an important adaptation to reduce crop yield loss due to water stress from both soil water deficit (low soil moisture) and atmospheric aridity (high vapor pressure deficit, VPD). Traditionally, irrigation has primarily focused on soil water deficit. Observational evidence demonstrates that stomatal conductance is co-regulated by soil moisture and VPD from water supply and demand aspects. Here we use a validated hydraulically-driven ecosystem model to reproduce the co-regulation pattern. Specifically, we propose a plant-centric irrigation scheme considering water supply-demand dynamics (SDD), and compare it with soil-moisture-based irrigation scheme (management allowable depletion, MAD) for continuous maize cropping systems in …

Magnitude And Uncertainty Of Nitrous Oxide Emissions From North America Based On Bottom-Up And Top-Down Approaches: Informing Future Research And National Inventories, R. Xu, Hanqin Tian, N. Pan, R. L. Thompson, J. G. Canadell, E. A. Davidson, C. Nevison, W. Winiwarter, H. Shi, S. Pan, J. Chang, P. Ciais, Shree Dangal, A. Ito, R. B. Jackson, F. Joos, R. Lauerwald, S. Lienert, T. Maavara, D. B. Millet, P. A. Raymond, P. Regnier, F. N. Tubiello, N. Vuichard, K. C. Wells, C. Wilson, J. Yang, Y. Yao, S. Zaehle, F. Zhou

School of Natural Resources: Faculty Publications

We synthesized N₂O emissions over North America using 17 bottom-up (BU) estimates from 1980– 2016 and five top-down (TD) estimates from 1998 to 2016. The BU-based total emission shows a slight increase owing to U.S. agriculture, while no consistent trend is shown in TD estimates. During 2007–2016, North American N₂O emissions are estimated at 1.7 (1.0–3.0) Tg N yr⁻¹ (BU) and 1.3 (0.9–1.5) Tg N yr⁻¹ (TD). Anthropogenic emissions were twice as large as natural fluxes from soil and water. Direct agricultural and industrial activities accounted for 68% of total anthropogenic emissions, 71% of …

Piezoelectricity In Hafnia, Sangita Dutta, Pratyush Buragohain, Sebastjan Glinsek, Claudia Richter, Hugo Aramberri, Haidong Lu, Uwe Schroeder, Emmanuel Defay, Alexei Gruverman, Jorge Íñiguez

Department of Physics and Astronomy: Faculty Publications

Because of its compatibility with semiconductor-based technologies, hafnia (HfO₂) is today’s most promising ferroelectric material for applications in electronics. Yet, knowledge on the ferroic and electromechanical response properties of this all-important compound is still lacking. Interestingly, HfO₂ has recently been predicted to display a negative longitudinal piezoelectric effect, which sets it apart from classic ferroelectrics (e.g., perovskite oxides like PbTiO₃) and is reminiscent of the behavior of some organic compounds. The present work corroborates this behavior, by first-principles calculations and an experimental investigation of HfO₂ thin films using piezoresponse force microscopy. Further, the simulations …

Regularity Criteria For The Kuramoto-Sivashinsky Equation In Dimensions Two And Three, Adam Larios, Mohammad Mahabubur Rahman, Kazuo Yamazaki

Department of Mathematics: Faculty Publications

We propose and prove several regularity criteria for the 2D and 3D Kuramoto-Sivashinsky equation, in both its scalar and vector forms. In particular, we examine integrability criteria for the regularity of solutions in terms of the scalar solution ∅, the vector solution u ≜ ∇∅, as well as the divergence div(u) = Δ∅, and each component of u and ∇u. We also investigate these criteria computationally in the 2D case, and we include snapshots of solutions for several quantities of interest that arise in energy estimates.

Electrochemical Beacon Method To Quantify 10 Attomolar Nucleic Acids With A Semilog Dynamic Range Of 7 Orders Of Magnitude, Rahul Tevatia, Alicia Chan, Lance Oltmanns, Jau Min Lim, Ander Christensen, Michael Stroller, Ravi Saraf

Department of Chemical and Biomolecular Engineering: Faculty Publications

Change in the dynamics of single-stranded DNA or RNA probes tethered to an Au electrode on immunospecific binding to the analyte is a versatile approach to quantify a variety of molecules, such as heavy metal ions, pesticides, proteins, and nucleic acids (NAs). A widely studied approach is the electrochemical beacon method where the redox of a dye attached to the probe decreases as its proximity to the underlying electrode changes on binding. The limit of quantification (LOQ) defined by the semilog dependence of the signal on target concentration is in the picomolar range. Here, a method was studied where, by …

Developing Techniques For The Identification Of Non-Canonical Rna Pairing And Analysis Of Lc-Ms Datasets, Christopher Jurich

Department of Chemistry: Dissertations, Theses, and Student Research

Non-canonical pairing dynamics in ribonucleic acid (RNA) structureand statistical analysis of metabolomics liquid chromatography mass spectrometry (LC-MS) datasets are two difficult problems that stand as open challenges.

RNA folding algorithms are used across a variety of disciplines to predict structures when experimental elucidation techniques are inconvenient or impractical. Though successful and widely adopted, folding algorithms make simplifying assumptions for loop regions due to their complex interactions and associated difficulty with generating energy parameters for relevant non-canonical pairing interactions. Modeling assumptions and a lack of energy parameters for loops limit accuracy in these functional critical regions of RNA. This work describes …

Ten Simple Rules For Creating A Scientific Web Application, Jessica L. Burnett, Renee Dale, Chung-Yi Hou, Gabriela Palomo-Muoz, Kaitlin Stack Whitney, Steve Aulenbach, Robert Sky Bristol, Denis Valle, Tristan P. Wellman

School of Natural Resources: Faculty Publications

The use of scientific web applications (SWApps) across biological and environmental sciences has grown exponentially over the past decades or so. Although quantitative evidence for such increased use in practice is scant, collectively, we have observed that these tools become more commonplace in teaching, outreach, and in science coproduction (e.g., as decision support tools). Despite the increased popularity of SWApps, researchers often receive little or no training in creating such tools. Although rolling out SWApps can be a relatively simple and quick process using modern, popular platforms like R shiny apps or Tableau dashboards, making them useful, usable, and sustainable …

Source Apportionment And Health Risk Assessment Of Nitrate In Foothill Aquifers Of Western Ghats, South India, Banajarani Panda, S. Chidambaram, Daniel D. Snow, Arindam Malakar, Dhiraj Kr Singh, L. Ramanathan

Nebraska Water Center: Faculty Publications

The present research reports the level of nitrate (NO₃^-), associated health risks and possible sources of contamination in groundwater from south India. Many samples (32%) are above or approaching the recommended level of NO₃^- for safe drinking water. The correlation analysis indicates different sources of NO₃^- contamination in different regions rather than a common origin. The isotopic measurements provide information about potential nitrogen sources contributing NO₃^- to the groundwater. Based on isotope analysis, the sources of NO₃^- in the groundwater of this region are likely to be from (a) …

Late Cretaceous Paleoceanographic Evolution And The Onset Of Cooling In The Santonian At Southern High Latitudes (Iodp Site U1513, Se Indian Ocean), Maria Rose Petrizzo, Kenneth G. Macleod, David K. Watkins, Erik Wolfgring, Brian T. Huber

Department of Earth and Atmospheric Sciences: Faculty Publications

The latest Cenomanian to Santonian sedimentary record recovered at IODP Expedition 369 Site U1513 in the Mentelle Basin (SE Indian Ocean, paleolatitude 60°S at 85 Ma) is studied to interpret the paleoceanographic evolution in the Southern Hemisphere. The planktonic foraminiferal assemblage changes, the depth ecology preferences of different species, and the surface and seafloor temperature inferred from the stable isotopic values measured on foraminiferal tests provide meaningful information to the understanding of the Late Cretaceous climate. The hothouse climate during the Turonian-Santonian, characterized by weak latitudinal temperature gradients and high atmospheric CO₂ concentrations, is followed by a progressive cooling …

Hyperseed: An End-To-End Method To Process Hyperspectral Images Of Seeds, Tian Gao, Anil Kumar Nalini Chandran, Puneet Paul, Harkamal Walia, Hongfeng Yu

School of Computing: Faculty Publications

High-throughput, nondestructive, and precise measurement of seeds is critical for the evaluation of seed quality and the improvement of agricultural productions. To this end, we have developed a novel end-to-end platform named HyperSeed to provide hyperspectral information for seeds. As a test case, the hyperspectral images of rice seeds are obtained from a high-performance line-scan image spectrograph covering the spectral range from 600 to 1700 nm. The acquired images are processed via a graphical user interface (GUI)-based open-source software for background removal and seed segmentation. The output is generated in the form of a hyperspectral cube and curve for each …

Hyperseed: An End-To-End Method To Process Hyperspectral Images Of Seeds, Tian Gao, Anil Kumar Nalini Chandran, Puneet Paul, Harkamal Walia, Hongfeng Yu

School of Computing: Faculty Publications

High-throughput, nondestructive, and precise measurement of seeds is critical for the evaluation of seed quality and the improvement of agricultural productions. To this end, we have developed a novel end-to-end platform named HyperSeed to provide hyperspectral information for seeds. As a test case, the hyperspectral images of rice seeds are obtained from a high-performance line-scan image spectrograph covering the spectral range from 600 to 1700 nm. The acquired images are processed via a graphical user interface (GUI)-based open-source software for background removal and seed segmentation. The output is generated in the form of a hyperspectral cube and curve for each …

Aerial Flight Paths For Communication, Alisha Bevins, Brittany Duncan

School of Computing: Faculty Publications

This article presents an understanding of naive users’ perception of the communicative nature of unmanned aerial vehicle (UAV) motions refined through an iterative series of studies. This includes both what people believe the UAV is trying to communicate, and how they expect to respond through physical action or emotional response. Previous work in this area prioritized gestures from participants to the vehicle or augmenting the vehicle with additional communication modalities, rather than communicating without clear definitions of the states attempting to be conveyed. In an attempt to elicit more concrete states and better understand specific motion perception, this work includes …

Irrigation Systems Management, Dean E. Eisenhauer, Derrel L. Martin, Derek M. Heeren, Glenn J. Hoffman

Open Educational Resources: Textbooks

Like most textbooks, this book grew out of our desire to have written material that matches the educational needs of both the students and the instructor of a college course, in this case a course entitled Irrigation Systems Management. The book is the culmination of course notes which have been in development and use for nearly 30 years.

The emphasis of this book is on the management of irrigation systems that are used for agricultural crop production. There are two distinct components of the book, starting with the soil-water-plant-atmosphere system and how soil water should be managed to achieve the …

Optimal Container Migration For Mobile Edge Computing: Algorithm, System Design And Implementation, Taewoon Kim, Motassem Al-Tarazi, Jenn-Wei Lin, Wooyeol Choi

School of Computing: Faculty Publications

Edge computing is a promising alternative to cloud computing for offloading computationally heavy tasks from resource-constrained mobile user devices. Placed at the edge of the network, edge computing is particularly advantageous to delay-limited applications for having a short distance to end- users. However, when a mobile user moves away from the service coverage of the associated edge server, the advantage gradually vanishes, increasing response time. Although service migration has been studied to address this problem focusing on minimizing the service downtime, both zero-downtime and the amount of traffic generated as a result of migration need further study. In this paper, …