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Use Of Post-Exposure Prophylaxis After Occupational Exposure To Zaire Ebolavirus, Karen K. Wong, Richard T. Davey, Angela L. Hewlett, Colleen S. Kraft, Aneesh K. Mehta, Mark J. Mulligan, Allison Beck, William Dorman, Christopher J. Kratochvil, Lilin Lai, Tara N. Palmore, Susan Rogers, Philip W. Smith, Anthony F. Suffredini, Mark Wolcott, Ute Ströher, Timothy M. Uyeki Jan 2016

Use Of Post-Exposure Prophylaxis After Occupational Exposure To Zaire Ebolavirus, Karen K. Wong, Richard T. Davey, Angela L. Hewlett, Colleen S. Kraft, Aneesh K. Mehta, Mark J. Mulligan, Allison Beck, William Dorman, Christopher J. Kratochvil, Lilin Lai, Tara N. Palmore, Susan Rogers, Philip W. Smith, Anthony F. Suffredini, Mark Wolcott, Ute Ströher, Timothy M. Uyeki

United States Public Health Resources

From September 2014–April 2015, six persons who had occupational exposures to Zaire ebolavirus in West Africa received investigational agents rVSV-ZEBOV or TKM-100802 for post-exposure prophylaxis and were monitored in the U.S. All patients experienced self-limited symptoms after PEP; none developed Ebola virus disease.


The Burden Of Hepatitis C Infection–Related Liver Fibrosis In The United States, R. Monina Klevens, Lauren Canary, Xiaohua Huang, Maxine M. Denniston, Anthony E. Yeo, Rick L. Pesano, John W. Ward, Scott Holmberg Jan 2016

The Burden Of Hepatitis C Infection–Related Liver Fibrosis In The United States, R. Monina Klevens, Lauren Canary, Xiaohua Huang, Maxine M. Denniston, Anthony E. Yeo, Rick L. Pesano, John W. Ward, Scott Holmberg

United States Public Health Resources

Background. Knowledge of the estimated proportion of hepatitis C virus (HCV)-infected persons with advanced fibrosis or cirrhosis is critical to estimating healthcare needs.

Methods. We analyzed HCV-related testing conducted by Quest Diagnostics from January 2010 through December 2013. Tests included hepatitis C antibody, HCV RNA, HCV genotype (nucleic acid tests [NAT]), liver function tests, and platelet counts; patient age was also determined. Aspartate aminotransferase (AST)-to-platelet ratio (APRI) was calculated as = 100*(aspartate aminotransferase [AST]/upper limit of AST)/platelet. Fibrosis-4 (FIB-4) was calculated as (age × AST)/(platelet ×√ alanine aminotransferase [ALT]). Persons were “currently infected” if they had ≥1 positive …


The Epidemiology And Outcomes Of Invasive Candida Infections Among Organ Transplant Recipients In The United States: Results Of The Transplant-Associated Infection Surveillance Network (Transnet), David R. Andes, Nasia Safdar, John W. Baddley, Barbara Alexander, Lisa Brumble, Allison Freifeld, Susan Hadley, University Of Iowa School Of Medicine, Carol Kauffman, G. Marshall Lyon, Vicki Morrison, Thomas Patterson, Trish Perl, Randall Walker, Tim Hess, Centers For Disease Control And Prevention, Peter G. Pappas Jan 2016

The Epidemiology And Outcomes Of Invasive Candida Infections Among Organ Transplant Recipients In The United States: Results Of The Transplant-Associated Infection Surveillance Network (Transnet), David R. Andes, Nasia Safdar, John W. Baddley, Barbara Alexander, Lisa Brumble, Allison Freifeld, Susan Hadley, University Of Iowa School Of Medicine, Carol Kauffman, G. Marshall Lyon, Vicki Morrison, Thomas Patterson, Trish Perl, Randall Walker, Tim Hess, Centers For Disease Control And Prevention, Peter G. Pappas

United States Public Health Resources

Background: Invasive candidiasis (IC) is a common cause of mortality in solid organ transplant recipients (OTRs), but knowledge of epidemiology in this population is limited.

Method: The present analysis describes data from 15 US centers that prospectively identified IC from nearly 17 000 OTRs. Analyses were undertaken to determine predictors of infection and mortality.

Results: A total of 639 cases of IC were identified. The most common species was Candida albicans (46.3%), followed by Candida glabrata (24.4%) and Candida parapsilosis (8.1%). In 68 cases >1 species was identified. The most common infection site was bloodstream (44%), followed by intra-abdominal …


The Epidemiology And Outcomes Of Invasive Candida Infections Among Organ Transplant Recipients In The United States: Results Of The Transplant-Associated Infection Surveillance Network (Transnet), David R. Andes, Nasia Safdar, John W. Baddley, Barbara Alexander, Lisa Brumble, Allison Freifeld, Susan Hadley, Loreen Herwaldt, Carol Kauffman, G. Marshall Lyon, Vicki Morrison, Thomas Patterson, Trish Perl, Randall Walker, Tim Hess, Tom Chiller, Peter G. Pappas, The Transnet Investigators Jan 2016

The Epidemiology And Outcomes Of Invasive Candida Infections Among Organ Transplant Recipients In The United States: Results Of The Transplant-Associated Infection Surveillance Network (Transnet), David R. Andes, Nasia Safdar, John W. Baddley, Barbara Alexander, Lisa Brumble, Allison Freifeld, Susan Hadley, Loreen Herwaldt, Carol Kauffman, G. Marshall Lyon, Vicki Morrison, Thomas Patterson, Trish Perl, Randall Walker, Tim Hess, Tom Chiller, Peter G. Pappas, The Transnet Investigators

United States Public Health Resources

Background: Invasive candidiasis (IC) is a common cause of mortality in solid organ transplant recipients (OTRs), but knowledge of epidemiology in this population is limited.

Method: The present analysis describes data from 15 US centers that prospectively identified IC from nearly 17 000 OTRs. Analyses were undertaken to determine predictors of infection and mortality.

Results: A total of 639 cases of IC were identified. The most common species was Candida albicans (46.3%), followed by Candida glabrata (24.4%) and Candida parapsilosis (8.1%). In 68 cases >1 species was identified. The most common infection site was bloodstream (44%), followed by intra-abdominal

(14%). …


Who Consultation On Group B Streptococcus Vaccine Development: Report From A Meeting Held On 27–28 April 2016, Miwako Kobayashi, Stephanie J. Schrag, Mark R. Alderson, Shabir A. Madhi, Carol J. Baker, Ajoke Sobanjo-Ter Meulen, David C. Kaslow, Peter G. Smith, Vasee S. Moorthy, Johan Vekemans Jan 2016

Who Consultation On Group B Streptococcus Vaccine Development: Report From A Meeting Held On 27–28 April 2016, Miwako Kobayashi, Stephanie J. Schrag, Mark R. Alderson, Shabir A. Madhi, Carol J. Baker, Ajoke Sobanjo-Ter Meulen, David C. Kaslow, Peter G. Smith, Vasee S. Moorthy, Johan Vekemans

United States Public Health Resources

Globally, group B Streptococcus (GBS) remains a leading cause of sepsis and meningitis in infants in the first 90 days of life. Intrapartum antibiotic prophylaxis (IAP) for women at increased risk of transmitting GBS to their newborns has been effective in reducing part, but not all, of the GBS disease burden in many high income countries (HICs). In low- and middle-income countries (LMICs), IAP use is low. Immunization of pregnant women with a GBS vaccine represents an alternative strategy to protecting newborns and young infants, through transplacental antibody transfer and potentially by reducing new vaginal colonization. This vaccination strategy was …


Multiple-Locus Variable-Number Tandem Repeat Analysis For Strain Discrimination Of Non-O157 Shiga Toxin-Producing Escherichia Coli, Chris Timmons, Eija Trees, Efrain M. Ribot, Peter Gerner-Smidt, Patti Lafon, Sung Im, Li Maria Ma Jan 2016

Multiple-Locus Variable-Number Tandem Repeat Analysis For Strain Discrimination Of Non-O157 Shiga Toxin-Producing Escherichia Coli, Chris Timmons, Eija Trees, Efrain M. Ribot, Peter Gerner-Smidt, Patti Lafon, Sung Im, Li Maria Ma

United States Public Health Resources

Non-O157 Shiga toxin-producing Escherichia coli (STEC) are foodborne pathogens of growing concern worldwide that have been associated with several recent multistate and multinational outbreaks of foodborne illness. Rapid and sensitive molecular-based bacterial strain discrimination methods are critical for timely outbreak identification and contaminated food source traceback. One such method, multiple-locus variable-number tandemrepeat analysis(MLVA), is being used with increasing frequency in foodborne illness outbreak investigations to augment the current gold standard bacterial subtyping technique, pulsed-field gel electrophoresis (PFGE). The objective of this studywas to develop a MLVA assay for intra- and inter-serogroup discrimination of six major non-O157 STEC serogroups—O26, O111, O103, …


Evaluation Of Potentially Achievable Vaccination Coverage With Simultaneous Administration Of Vaccines Among Children In The United States, Zhen Zhao, Philip J. Smith, Holly A. Hill Jan 2016

Evaluation Of Potentially Achievable Vaccination Coverage With Simultaneous Administration Of Vaccines Among Children In The United States, Zhen Zhao, Philip J. Smith, Holly A. Hill

United States Public Health Resources

Background: Routine administration of all age-appropriate doses of vaccines during the same visit is recommended for children by the National Vaccine Advisory Committee (NVAC) and the Advisory Committee on Immunization Practices (ACIP).

Methods: Evaluate the potentially achievable vaccination coverage for ≥4 doses of diphtheria and tetanus toxoids and a cellular pertussis vaccine (4+DTaP), ≥4 doses of pneumococcal conjugate vaccine (4+PCV),and the full series of Haemophilus influenzae type b vaccine (Hib-FS) with simultaneous administration of all recommended childhood vaccines. Compare the potentially achievable vaccination coverage to the reported vaccination coverage for calendar years 2001 through 2013; by state in the United …


The Differentiation And Protective Function Of Cytolytic Cd4 T Cells In Influenza Infection, Deborah M. Brown, Anna T. Lampe, Aspen M. Workman Jan 2016

The Differentiation And Protective Function Of Cytolytic Cd4 T Cells In Influenza Infection, Deborah M. Brown, Anna T. Lampe, Aspen M. Workman

School of Biological Sciences: Faculty Publications

CD4 T cells that recognize peptide antigen in the context of class II MHC can differentiate into various subsets that are characterized by their helper functions. However, increasing evidence indicates that CD4 cells with direct cytolytic activity (CD4 CTL) play a role in chronic as well as acute infections, such as influenza A virus (IAV) infection. In the last couple of decades, techniques to measure the frequency and activity of these cytolytic cells has demonstrated their abundance in infections, such as human immunodeficiency virus, mouse pox, murine gamma herpes virus, cytomegalovirus, Epstein–Barr virus, and influenza among others. We now appreciate …


Barriers To Prevention In Dengue Fever In Pakistan, Khyber Pakhtunkhwa, Swat District, Abdul Zahir, Assad Ullah, Mussawar Shah, Arsalan Mussawar Jan 2016

Barriers To Prevention In Dengue Fever In Pakistan, Khyber Pakhtunkhwa, Swat District, Abdul Zahir, Assad Ullah, Mussawar Shah, Arsalan Mussawar

Journal for the Advancement of Developing Economies

The main aim of this study was to find out the barriers in dengue prevention in the Swat District of Khyber Pkhtunkhwa Province, Pakistan. A sample size of 354 respondents were proportionally allocated to each Mahallah or street (Tahir Abad, Angaro Dheri, Usman Abad and Banr) and then randomly selected. The association of the independent variable (barriers to prevention) and dependent variables (practices for control) were tested by using a Chi Square test. The perception about barriers in dengue prevention shows that a highly significant association was found between practices for control and access to medical facilities (p=0.034), government agencies …


Der Mönchsgeier Aegypius Monachus (L., 1766) Und Seine Mallophagen (Insecta, Phthiraptera) In Der Mongolei = Cinereous Vulture Aegypius Monachus (L., 1766) And Its Chewing Lice (Insecta, Phthiraptera) In Mongolia, Eberhard Mey, Michael Stubbe, Davaa Lchagvasuren, Annegret Stubbe Jan 2016

Der Mönchsgeier Aegypius Monachus (L., 1766) Und Seine Mallophagen (Insecta, Phthiraptera) In Der Mongolei = Cinereous Vulture Aegypius Monachus (L., 1766) And Its Chewing Lice (Insecta, Phthiraptera) In Mongolia, Eberhard Mey, Michael Stubbe, Davaa Lchagvasuren, Annegret Stubbe

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

During a series of studies on the population, ecology, and biology of the Cinereous Vulture in Mongolia, fully feathered nestlings of the species from 9 nests were examined, without the use of chemical methods, for Mallophaga infestation from 2010 to 2015. The collection resulted in several first records for Mongolia of three species: Laemobothrion vulturis (J. C. FABRICIUS, 1775) sensu lato (Amblycera, Laemobothriidae), Neocolpocephalum aegypii (TENDEIRO, 1989) (Amblycera, Menoponidae s. l.) sp. inq., and Falcolipeurus quadripustulatus (BURMEISTER, 1838) (Ischnocera, Philopteridae s. l.). Despite being expected, there has still been no record of Agypoecus brevicollis (BURMEISTER, 1838) in Mongolia.

Chewing louse …


Key To The Bat Fleas Of Mongolia, Ingo Scheffler Jan 2016

Key To The Bat Fleas Of Mongolia, Ingo Scheffler

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Fleas of the family Ischnopsyllidae belong to the common bat ectoparasites. The current taxonomic status of these insects in Mongolia includes seven species for which we provide a determination key.


Bat Ectoparasites Of Mongolia, Part 3, Ingo Scheffler, Ariunbold Jargalsaikhan, Idertsogt Bolorchimeg, Annegret Stubbe, Michael Stubbe, Andreas Abraham, K. Thiele Jan 2016

Bat Ectoparasites Of Mongolia, Part 3, Ingo Scheffler, Ariunbold Jargalsaikhan, Idertsogt Bolorchimeg, Annegret Stubbe, Michael Stubbe, Andreas Abraham, K. Thiele

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The fauna of Mongolian bats and their ectoparasites is not yet fully documented. This study analyzes ectoparasite samples of 15 bat species from diverse taiga, steppe, and desert locations. We recorded 27 parasite species in total and report their abundance, host preference, and occurrence herein. In describing a new bat fly species (Basilia dolchii n. spec.), reporting six parasite species never before recorded in Mongolia, and examining rare host species such as Myotis frater and Murina hilgendorfi, this work expands present knowledge in this research area. To assess respective individual and species-specific parasite loads comprised of different insects …


The Cuba-Florida Plant-Pest Pathway, Cory Penca, Damian C. Adams, Jiri Hulcr Jan 2016

The Cuba-Florida Plant-Pest Pathway, Cory Penca, Damian C. Adams, Jiri Hulcr

Insecta Mundi

Recent shifts in US policies towards Cuba suggest a relaxation or lifting of the embargo may occur in the

near future. With the prospects of open travel and trade with Cuba come concerns over the introduction of agricultural

pests. In an effort to assess these concerns the distribution-based introduction risk of pests listed in the 2015 Cooperative

Agricultural Pest Survey’s (CAPS) list of priority pests of economic and environmental importance is reviewed. Of

the 59 pests on the CAPS priority pest list, 20 have been recorded in the literature as being present in the Caribbean

Basin, South America and Central …


Giant Chloroviruses: Five Easy Questions, James L. Van Etten, David Dunigan Jan 2016

Giant Chloroviruses: Five Easy Questions, James L. Van Etten, David Dunigan

Nebraska Center for Virology: Faculty Publications

Chloroviruses are large, icosahedral, dsDNA-containing viruses that replicate in certain unicellular, chlorella-like green algae [1,2]. They exist in freshwater throughout the world with titers as high as thousands of plaque-forming units (PFU) per ml of indigenous water although titers are typically 1–100 PFU/ml. Titers fluctuate during the year with the highest titers typically occurring in the spring and late fall. Known chlorovirus hosts, which are normally symbionts and are often referred to as zoochlorellae, are associated with either the protozoan Paramecium bursaria (Fig 1A), the coelenterate Hydra viridis, or the heliozoan Acanthocystis turfacea. Zoochlorellae are resistant to viruses …


Genetic Barrier To Direct Acting Antivirals In Hcv Sequences Deposited In The European Databank, Dimas Alexandre Kliemann, Cristiane Valle Tovo, Ana Beatriz Gorini Da Veiga, André Luiz Machado, John T. West Jan 2016

Genetic Barrier To Direct Acting Antivirals In Hcv Sequences Deposited In The European Databank, Dimas Alexandre Kliemann, Cristiane Valle Tovo, Ana Beatriz Gorini Da Veiga, André Luiz Machado, John T. West

Nebraska Center for Virology: Faculty Publications

Background & Aims: Development of resistance results from mutations in the viral genome, and the presence of selective drug pressure leads to the emergence of a resistant virus population. The aim of this study was to analyze the impact of genetic variability on the genetic barrier to drug resistance to DAAs.

Methods: The genetic barrier was quantified based on the number and type of nucleotide mutations required to impart resistance, considering full-length HCV NS3, NS5A and NS5B regions segregated by genotype into subtypes 1a, 1b, 2a, 2b and 3a. This study analyzed 789 NS3 sequences, 708 sequences and 536 NS5B …


Kaposi’S Sarcoma-Associated Herpesvirus Reduces Cellular Myeloid Differentiation Primary-Response Gene 88 (Myd88) Expression Via Modulation Of Its Rna, Amy Lingel, Erica Ehlers, Qianli Wang, Mingxia Cao, Charles Wood, Rongtuan Lin, Luwen Zhang Jan 2016

Kaposi’S Sarcoma-Associated Herpesvirus Reduces Cellular Myeloid Differentiation Primary-Response Gene 88 (Myd88) Expression Via Modulation Of Its Rna, Amy Lingel, Erica Ehlers, Qianli Wang, Mingxia Cao, Charles Wood, Rongtuan Lin, Luwen Zhang

Nebraska Center for Virology: Faculty Publications

Kaposi’s sarcoma (KS)-associated herpesvirus (KSHV) is a human gammaherpesvirus associated with several human malignancies. The replication and transcription activator (RTA) is necessary and sufficient for the switch from KSHV latency to lytic replication. Interleukin 1 (IL-1) is a major mediator for inflammation and plays an important role in both innate and adaptive immunity. Myeloid differentiation primary response gene 88 (MyD88) is an essential adaptor molecule for IL-1 as well as most Toll-like receptor signaling. In this study, we identified a novel mechanism by which KSHV interferes with host inflammation and immunity. KSHV RTA specifically reduces the steady-state protein levels of …


Nf45 And Nf90 Bind Hiv-1 Rna And Modulate Hiv Gene Expression, Yan Li, Michael Belshan Jan 2016

Nf45 And Nf90 Bind Hiv-1 Rna And Modulate Hiv Gene Expression, Yan Li, Michael Belshan

Nebraska Center for Virology: Faculty Publications

A previous proteomic screen in our laboratory identified nuclear factor 45 (NF45) and nuclear factor 90 (NF90) as potential cellular factors involved in human immunodeficiency virus type 1 (HIV-1) replication. Both are RNA binding proteins that regulate gene expression; and NF90 has been shown to regulate the expression of cyclin T1 which is required for Tat-dependent trans-activation of viral gene expression. In this study the roles of NF45 and NF90 in HIV replication were investigated through overexpression studies. Ectopic expression of either factor potentiated HIV infection, gene expression, and virus production. Deletion of the RNA binding domains of NF45 …


Mucosal Vaccination By Adenoviruses Displaying Reovirus Sigma 1, Eric A. Weaver, Zenaido T. Camacho, Matthew L. Hillestad, Catherine M. Crosby, Mallory A. Turner, Adam J. Guenzel, Hind J. Fadel, George T. Mercier, Michael A. Barry Jan 2016

Mucosal Vaccination By Adenoviruses Displaying Reovirus Sigma 1, Eric A. Weaver, Zenaido T. Camacho, Matthew L. Hillestad, Catherine M. Crosby, Mallory A. Turner, Adam J. Guenzel, Hind J. Fadel, George T. Mercier, Michael A. Barry

Nebraska Center for Virology: Faculty Publications

We previously developed adenovirus serotype 5 (Ad5) vectors displaying the sigma 1 protein from reovirus as mucosal vaccines. Ad5-sigma retargets to JAM-1 and sialic acid, but had 40-fold reduced gene delivery when compared to Ad5. While weaker at transduction, Ad5-sigma generated stronger T cell responses than Ad5 when used for mucosal immunization. New Ad5- fiber-sigma vectors were generated here by varying the number of fiber β-spiral shaft repeats (R) fused between fiber tail and the sigma. Ad5 virions encoding R3, R14, and R20 chimeras were rescued. Increasing chimera length led to their decreasing encapsidation of these proteins in the virions. …


Modeling The Geographic Distribution Of Ixodes Scapularis And Ixodes Pacificus (Acari: Ixodidae) In The Contiguous United States, Micah B. Hahn, Catherine S. Jarnevich, Andrew J. Monaghan, Rebecca J. Eisen Jan 2016

Modeling The Geographic Distribution Of Ixodes Scapularis And Ixodes Pacificus (Acari: Ixodidae) In The Contiguous United States, Micah B. Hahn, Catherine S. Jarnevich, Andrew J. Monaghan, Rebecca J. Eisen

Entomology Papers from Other Sources

In addition to serving as vectors of several other human pathogens, the black-legged tick, Ixodes scapularis Say, and western black-legged tick, Ixodes pacificus Cooley and Kohls, are the primary vectors of the spirochete (Borrelia burgdorferi) that causes Lyme disease, the most common vector-borne disease in the United States. Over the past two decades, the geographic range of I. pacificus has changed modestly while, in contrast, the I. scapularis range has expanded substantially, which likely contributes to the concurrent expansion in the distribution of human Lyme disease cases in the Northeastern, North-Central and Mid-Atlantic states. Identifying counties that contain …


Genetic And Genomic Basis Of Antibody Response To Porcine Reproductive And Respiratory Syndrome (Prrs) In Gilts And Sows, Nick V. Serão, Robert A. Kemp, Benny Mote, Philip Willson, John C.S. Harding, Stephen C. Bishop, Graham S. Plastow, Jack C.M. Dekkers Jan 2016

Genetic And Genomic Basis Of Antibody Response To Porcine Reproductive And Respiratory Syndrome (Prrs) In Gilts And Sows, Nick V. Serão, Robert A. Kemp, Benny Mote, Philip Willson, John C.S. Harding, Stephen C. Bishop, Graham S. Plastow, Jack C.M. Dekkers

Department of Animal Science: Faculty Publications

Background: Our recent research showed that antibody response to porcine reproductive and respiratory syndrome (PRRS), measured as sample-to-positive (S/P) ratio, is highly heritable and has a high genetic correlation with reproductive performance during a PRRS outbreak. Two major quantitative trait loci (QTL) on Sus scrofa chromosome 7 (SSC7; QTLMHC and QTL130) accounted for ~40 % of the genetic variance for S/P. Objectives of this study were to estimate genetic parameters for PRRS S/P in gilts during acclimation, identify regions associated with S/P, and evaluate the accuracy of genomic prediction of S/P across populations with different prevalences of …


Genome To Phenome: Improving Animal Health, Production, And Well-Being – A New Usda Blueprint For Animal Genome Research 2018–2027, Caird Rexroad, Jeffrey Vallet, Lakshmi Kumar Matukumalli, James Reecy, Derek Bickhart, Harvey Blackburn, Mark Boggess, Hans Cheng, Archie Clutter, Noelle Cockett, Catherine Ernst, Janet E. Fulton, John Liu, Joan Lunney, Holly Neibergs, Catherine Purcell, Timothy P. L. Smith, Tad Sonstegard, Jerry Taylor, Bhanu Telugu, Alison Van Eenennaam, Curtis P. Van Tassell, Kevin Wells Jan 2016

Genome To Phenome: Improving Animal Health, Production, And Well-Being – A New Usda Blueprint For Animal Genome Research 2018–2027, Caird Rexroad, Jeffrey Vallet, Lakshmi Kumar Matukumalli, James Reecy, Derek Bickhart, Harvey Blackburn, Mark Boggess, Hans Cheng, Archie Clutter, Noelle Cockett, Catherine Ernst, Janet E. Fulton, John Liu, Joan Lunney, Holly Neibergs, Catherine Purcell, Timothy P. L. Smith, Tad Sonstegard, Jerry Taylor, Bhanu Telugu, Alison Van Eenennaam, Curtis P. Van Tassell, Kevin Wells

Department of Animal Science: Faculty Publications

In 2008, a consortium led by the Agricultural Research Service (ARS) and the National Institute for Food and Agriculture (NIFA) published the “Blueprint for USDA Efforts in Agricultural Animal Genomics 2008–2017,” which served as a guiding document for research and funding in animal genomics. In the decade that followed, many of the goals set forth in the blueprint were accomplished. However, several other goals require further research. In addition, new topics not covered in the original blueprint, which are the result of emerging technologies, require exploration. To develop a new, updated blueprint, ARS and NIFA, along with scientists in the …


Large Genomic Differences Between Moraxella Bovoculi Isolates Acquired From The Eyes Of Cattle With Infectious Bovine Keratoconjunctivitis Versus The Deep Nasopharynx Of Asymptomatic Cattle, Aaron M. Dickey, John D. Loy, James L. Bono, Timonthy P. L. Smith, Mike D. Apley, Brian V. Lubbers, Keith D. Dedonder, Sarah F. Capik, Robert L. Larson, Brad J. White, Jochen Blom, Carol G. Chitko-Mckown, Michael L. Clawson Jan 2016

Large Genomic Differences Between Moraxella Bovoculi Isolates Acquired From The Eyes Of Cattle With Infectious Bovine Keratoconjunctivitis Versus The Deep Nasopharynx Of Asymptomatic Cattle, Aaron M. Dickey, John D. Loy, James L. Bono, Timonthy P. L. Smith, Mike D. Apley, Brian V. Lubbers, Keith D. Dedonder, Sarah F. Capik, Robert L. Larson, Brad J. White, Jochen Blom, Carol G. Chitko-Mckown, Michael L. Clawson

School of Veterinary and Biomedical Sciences: Faculty Publications

Moraxella bovoculi is a recently described bacterium that is associated with infectious bovine keratoconjunctivitis (IBK) or “pinkeye” in cattle. In this study, closed circularized genomes were generated for seven M. bovoculi isolates: three that originated from the eyes of clinical IBK bovine cases and four from the deep nasopharynx of asymptomatic cattle. Isolates that originated from the eyes of IBK cases profoundly differed from those that originated from the nasopharynx of asymptomatic cattle in genome structure, gene content and polymorphism diversity and consequently placed into two distinct phylogenetic groups. These results suggest that there are genetically distinct strains of M. …


Ten-Year Status Of The Eastern Migratory Whooping Crane Reintroduction, Richard P. Urbanek, Sara E. Zimorski, Eva K. Szyskoski, Marianne M. Wellington Jan 2016

Ten-Year Status Of The Eastern Migratory Whooping Crane Reintroduction, Richard P. Urbanek, Sara E. Zimorski, Eva K. Szyskoski, Marianne M. Wellington

Proceedings of the North American Crane Workshop

From 2001 to 2010, 132 costume-reared juvenile whooping cranes (Grus americana) were led by ultralight aircraft from Necedah National Wildlife Refuge (NWR) in central Wisconsin to the Gulf Coast of Florida on their first autumn migration (ultralight-led or UL), and 46 juveniles were released directly on Necedah NWR during autumn of the hatch year (direct autumn release or DAR). Return rate in spring was 90.5% for UL and 69.2% for DAR, the lower value of the latter attributable to 1 cohort with migration problems. Overall population survival 1 year and from 1 to 3 years post-release was 81% and 84%, …


Presence Of Pathogenic Escherichia Coli Is Correlated With Bacterial Community Diversity And Composition On Pre-Harvest Cattle Hides, Jessica Chopyk, Ryan M. Moore, Zachary Dispirito, Zachary R. Stromberg, Gentry L. Lewis, David G. Renter, Natalia Cernicchiaro, Rodney A. Moxley, K. Eric Wommack Jan 2016

Presence Of Pathogenic Escherichia Coli Is Correlated With Bacterial Community Diversity And Composition On Pre-Harvest Cattle Hides, Jessica Chopyk, Ryan M. Moore, Zachary Dispirito, Zachary R. Stromberg, Gentry L. Lewis, David G. Renter, Natalia Cernicchiaro, Rodney A. Moxley, K. Eric Wommack

School of Veterinary and Biomedical Sciences: Faculty Publications

Background: Since 1982, specific serotypes of Shiga toxin-producing Escherichia coli (STEC) have been recognized as significant foodborne pathogens acquired from contaminated beef and, more recently, other food products. Cattle are the major reservoir hosts of these organisms, and while there have been advancements in food safety practices and industry standards, STEC still remains prevalent within beef cattle operations with cattle hides implicated as major sources of carcass contamination. To investigate whether the composition of hide-specific microbial communities are associated with STEC prevalence, 16S ribosomal RNA (rRNA) bacterial community profiles were obtained from hide and fecal samples collected from a large …


Prevalence And Level Of Enterohemorrhagic Escherichia Coli In Culled Dairy Cows At Harvest, Zachary R. Stromberg, Gentry L. Lewis, Sharif S. Aly, Terry W. Lehenbauer, Joseph M. Bosilevac, Natalia Cernicchiaro, Rodney A. Moxley Jan 2016

Prevalence And Level Of Enterohemorrhagic Escherichia Coli In Culled Dairy Cows At Harvest, Zachary R. Stromberg, Gentry L. Lewis, Sharif S. Aly, Terry W. Lehenbauer, Joseph M. Bosilevac, Natalia Cernicchiaro, Rodney A. Moxley

School of Veterinary and Biomedical Sciences: Faculty Publications

The primary objective of this study was to determine the prevalence and level of enterohemorrhagic Escherichia coli (EHEC) O26, O45, O103, O111, O121, and O145 (collectively EHEC-6) plus EHEC O157 in fecal, hide, and preintervention carcass surface samples from culled dairy cows. Matched samples (n=300) were collected from 100 cows at harvest and tested by a culture-based method and two molecular methods: NeoSEEK STEC (NS) and Atlas STEC EG2 Combo. Both the culture and NS methods can be used to discriminate among the seven EHEC types (EHEC-7), from which the cumulative prevalence was inferred, whereas the Atlas method can discriminate …


Recapitulating Cross-Species Transmission Of Sivcpz To Humans Using Humanized-Blt Mice, Zhe Yuan, Guobin Kang, Fangrui Ma, Wuxun Lu, Wenjin Fan, Christine M. Fennessey, Brandon F. Keele, Qingsheng Li Jan 2016

Recapitulating Cross-Species Transmission Of Sivcpz To Humans Using Humanized-Blt Mice, Zhe Yuan, Guobin Kang, Fangrui Ma, Wuxun Lu, Wenjin Fan, Christine M. Fennessey, Brandon F. Keele, Qingsheng Li

Nebraska Center for Virology: Faculty Publications

The origins of HIV-1 have been widely accepted to be the consequence of simian immunodeficiency viruses from wild chimpanzees (SIVcpz) crossing over to humans. However, there has not been any in vivo study of SIVcpz infection of humans. Also, it remains largely unknown why only specific SIVcpz strains have achieved cross-species transmission and what transmission risk might exist for those SIVcpz strains that have not been found to infect humans. Closing this knowledge gap is essential for better understanding cross-species transmission and predicting the likelihood of additional cross-species transmissions of SIV into humans. Here we show hu-BLT mice are susceptible …


High Glucose Induces Reactivation Of Latent Kaposi’S Sarcoma-Associated Herpesvirus, Fengchun Ye, Yan Zeng, Jingfeng Sha, Tiffany Jones, Kurt Kuhne, Charles Wood, Shou-Jiang Gao Jan 2016

High Glucose Induces Reactivation Of Latent Kaposi’S Sarcoma-Associated Herpesvirus, Fengchun Ye, Yan Zeng, Jingfeng Sha, Tiffany Jones, Kurt Kuhne, Charles Wood, Shou-Jiang Gao

Nebraska Center for Virology: Faculty Publications

High prevalence of Kaposi’s sarcoma (KS) is seen in diabetic patients. It is unknown if the physiological condition of diabetes contributes to KS development. We found elevated levels of viral lytic gene expression when Kaposi’s sarcoma-associated herpesvirus (KSHV) infected cells were cultured in high glucose medium. To demonstrate the association between high glucose and KSHV replication, we xeno29

grafted telomerase-immortalized human umbilical vein endothelial cells that are infected with KSHV (TIVE-KSHV) into hyperglycemic and normal nude mice. The injected cells expressed significantly higher levels of KSHV lytic genes in hyperglycemic mice than in normal mice. We further demonstrated that high …


Persistent Low-Level Replication Of Sivδnef Drives Maturation Of Antibody And Cd8 T Cell Responses To Induce Protective Immunity Against Vaginal Siv Infection, Sama Adnan, R. Keith Reeves, Jacqueline Gillis, Fay E. Wong, Yi Yu, Jeremy V. Camp, Qingsheng Li, Michelle Connole, Yuan Li, Michael Piatak Jr., Jeffrey D. Lifson, Wenjun Li, Brandon F. Keele, Pamela A. Kozlowski, Ronald C. Desrosiers, Ashley T. Haase, R. Paul Johnson Jan 2016

Persistent Low-Level Replication Of Sivδnef Drives Maturation Of Antibody And Cd8 T Cell Responses To Induce Protective Immunity Against Vaginal Siv Infection, Sama Adnan, R. Keith Reeves, Jacqueline Gillis, Fay E. Wong, Yi Yu, Jeremy V. Camp, Qingsheng Li, Michelle Connole, Yuan Li, Michael Piatak Jr., Jeffrey D. Lifson, Wenjun Li, Brandon F. Keele, Pamela A. Kozlowski, Ronald C. Desrosiers, Ashley T. Haase, R. Paul Johnson

Nebraska Center for Virology: Faculty Publications

Defining the correlates of immune protection conferred by SIVΔnef, the most effective vaccine against SIV challenge, could enable the design of a protective vaccine against HIV infection. Here we provide a comprehensive assessment of immune responses that protect against SIV infection through detailed analyses of cellular and humoral immune responses in the blood and tissues of rhesus macaques vaccinated with SIVΔnef and then vaginally challenged with wild-type SIV. Despite the presence of robust cellular immune responses, animals at 5 weeks after vaccination displayed only transient viral suppression of challenge virus, whereas all macaques challenged at weeks 20 and 40 post-SIVΔnef …


Health Care Worker Follow-Up Compliance After Occupational Bloodborne Pathogens Exposure: A Brief Report, Juan C. Díaz, Lucas A. Johnson Jan 2016

Health Care Worker Follow-Up Compliance After Occupational Bloodborne Pathogens Exposure: A Brief Report, Juan C. Díaz, Lucas A. Johnson

Uniformed Services University of the Health Sciences

A retrospective cohort study was conducted examining health care worker (HCW) compliance with Centers for Disease Control and Prevention recommendations following occupational bloodborne pathogen (BBP) exposure. HCWs with a BBP exposure from a known HIV- or hepatitis C virus-seropositive individual were less likely to complete recommended follow-up compared with HCWs with seronegative source patient exposures (adjusted odds ratio, 0.02 and 0.09, respectively). Continued targeted education and extra vigilance in performing postexposure surveillance are warranted in this higher-risk population.


Parental Presence At The Bedside Of A Child With Suspected Ebola: An Expert Discussion, Cynthia F. Hinton, H. Dele Davies, Susan N. Hocevar, Steven E. Krug, Aaron M. Milstone, Leonard Ortmann, Cynthia H. Cassell, Georgina Peacock, Stephanie E. Griese Jan 2016

Parental Presence At The Bedside Of A Child With Suspected Ebola: An Expert Discussion, Cynthia F. Hinton, H. Dele Davies, Susan N. Hocevar, Steven E. Krug, Aaron M. Milstone, Leonard Ortmann, Cynthia H. Cassell, Georgina Peacock, Stephanie E. Griese

United States Public Health Resources

The Ebola virus disease (Ebola) outbreak in West Africa (2014-2015) prompted domestic planning to address the scenario in which a traveler imports Ebola into the United States. Parental presence at the bedside of a child with suspected or confirmed Ebola emerged as a challenging issue for pediatric health care providers and public health practitioners. At the heart of the issue was the balance of family-centered care and appropriate infection control, which are not easily aligned in the setting of Ebola. In the following dialogue, pediatricians, who participated in discussions about parental presence during the evaluation of pediatric persons under investigation, …