Digital Commons Network^™

Covid‑19‑Related Risk, Resilience, And Mental Health Among Mexican American Mothers Across The First Year Of The Pandemic, Amy L. Non, Elizabeth S. Clausing, Sandraluz Lara‑Cinisomo, Kimberly L. D’Anna Hernandez

Center for Brain, Biology, and Behavior: Faculty Publications

Background Latina mothers have been especially affected by the pandemic and historically exhibit high rates of depression and anxiety. However, few longitudinal studies have assessed the effect of the pandemic on this vulnerable population. We hypothesized that COVID-19-related stressors would associate with psychological distress among Latina mothers across the first year of the pandemic.

Methods We investigated COVID-19-related impact, stigma, and fears across two critical time points and changes in these measures in relation to changes in maternal anxiety and depression among mothers of Mexican descent living in Southern California (n=152). Surveys were administered within 5–16 weeks of …

Examination Of The Prevalence And Behaviors Of Pathogenic And Spoilage Bacteria At Multiple Stages In The Meat Processing Chain, Samuel C. Watson

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

As long as there is food, there will also be bacteria that are capable of compromising the quality and safety of food. This dissertation aims to study bacteria capable of spoiling meat, causing illness, or both. The literature review summarizes the understanding of several bacterial pathogens, current issues in combating those pathogens in the food supply, and how spoilage Pseudomonas behave in the meat supply. Chapter 2 explored the impact of organic acid treatments on the spoilage microbiome of raw beef during extended storage. While Pseudomonas and Yersinia were both present in significant levels, Lactococcus was determined to be the …

A Bio-Economic Modeling Analysis Of Livestock Grazing On Rangelands Utilizing A Supplementary Grazing Resource, Jessica L. Windh

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation is a compilation of 5 chapters culminating in a bioeconomic model of the interactions between an integrated crop-livestock system and native rangeland grazing system. The model is developed using data from the eastern Sandhills of Nebraska, a location where cropping systems of Eastern Nebraska border one of the last intact grasslands remaining in North America.

The first chapter introduces the reader to the systems that will be modeled in the dissertation. In Chapter 2 we used a linear regression to model grassland biomass production as a function of climatic variables; we were unsuccessful in modeling season-long production in …

Organizational Change Process Milwaukee - Site Intervention Logic Model, Quality Improvement Center For Workforce Development

Other QIC-WD Products

Each QIC-WD site developed a logic model to serve as a visual representation of their selected intervention. All logic models included four main components: inputs, activities, outputs, and outcomes. Collectively, these demonstrate the resource and actions required to implement the program, as well as the associated result of changes anticipated through implementation of the program. The hypothesized relationships are represented by the pathways connecting the listed activities and anticipated outcomes.

Janus , A Spliceosome-Associated Protein, Promotes Mirna Biogenesis In Arabidopsis, Mu Li, Huihui Yu, Bangjun Zhou, Lu Gan, Shengjun Li, Chi Zhang, Bin Yu

Center for Plant Science Innovation: Faculty Publications

MicroRNAs ( miRNAs ) are important regulators of genes expression. Their levels are precisely controlled through modulating the activity of the microprocesser complex ( MC ) . Here, we report that JANUS, a homology of the conserved U2 snRNP assembly factor in yeast and human, is required for miRNA accumulation. JANUS associates with MC components Dicer-like 1 ( DCL1 ) and SERRATE ( SE ) and directly binds the stem- loop of pri-miRNAs. In a hypomorphic janus mutant, the activity of DCL1, the numbers of MC, and the interaction of primary miRNA transcript ( pri-miRNAs ) with MC are reduced. …

Bridging Domain Gaps For Cross-Spectrum And Long-Range Face Recognition Using Domain Adaptive Machine Learning, Cedric Armel Nimpa Fondje

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Face recognition technology has witnessed significant advancements in recent decades, enabling its widespread adoption in various applications such as security, surveillance, and biometrics applications. However, one of the primary challenges faced by existing face recognition systems is their limited performance when presented with images from different modalities or domains( such as infrared to visible, long range to close range, nighttime to daytime, profile to f rontal, etc.) Additionally, advancements in camera sensors, analytics beyond the visible spectrum, and the increasing size of cross-modal datasets have led to a particular interest in cross-modal learning for face recognition in the biometrics and …

Probing The Electroweak Phase Transition With Exotic Higgs Decays, Marcela Carena, Jonathan Kozaczuk, Zhen Liu, Tong Ou, Michael J. Ramsey-Musolf, Jessie Shelton, Yikun Wang, Ke-Pan Xie

Department of Physics and Astronomy: Faculty Publications

An essential goal of the Higgs physics program at the LHC and beyond is to explore the nature of the Higgs potential and shed light on the mechanism of electroweak symmetry breaking. An important class of models alter the thermal history of electroweak symmetry breaking from the predictions of the Standard Model (SM). This paper reviews the existence of a region of parameter space where a strong first-order electroweak phase transition is compatible with exotic decays of the SM-like Higgs boson. A dedicated search for exotic Higgs decays can actively explore this framework at the Large Hadron Collider (LHC), while …

Reduced Grey Matter Volume In Adolescents With Conduct Disorder: A Region‑Of‑Interest Analysis Using Multivariate Generalized Linear Modeling, Ru Zhang, Robert James R. Blair, Karina S. Blair, Matthew Dobbertin, Jaimie Elowsky, Johannah Bashford‑Largo, Ahria J. Dominguez, Melissa Hatch, Sahil Bajaj

Center for Brain, Biology, and Behavior: Faculty Publications

Background

Conduct disorder (CD) involves a group of behavioral and emotional problems that usually begins during childhood or adolescence. Structural brain alterations have been observed in CD, including the amygdala, insula, ventrolateral and medial prefrontal cortex, anterior cingulate cortex, and fusiform gyrus. The current study developed a multivariate generalized linear model (GLM) to differentiate adolescents with CD from typically developing (TD) adolescents in terms of grey matter volume (GMV).

Methods

The whole‐brain structural MRI data were collected from 96 adolescents with CD (mean age = 16.188 ± 1.259 years; mean IQ = 104.292 ± 8.107 ; 63 males) and 90 …

A Multi-Organ Maize Metabolic Model Connects Temperature Stress With Energy Production And Reducing Power Generation, Niaz Bahar Chowdhury, Margaret Simons- Senftle, Berengere Decouard, Isabelle Quillere, Martine Rigault, Karuna Anna Sajeevan, Bibek Acharya, Ratul Chowdhury, Bertrand Hirel, Alia Dellagi, Costas Maranas, Rajib Saha

Department of Chemical and Biomolecular Engineering: Faculty Publications

Climate change has adversely affected maize productivity. Thereby, a holistic understanding of metabolic crosstalk among its organs is important to address this issue. Thus, we reconstructed the first multi-organ maize metabolicmodel, iZMA6517, and contextualized itwith heat and cold stress transcriptomics data using expression distributed reaction flux measurement (EXTREAM) algorithm. Furthermore, implementing metabolic bottleneck analysis on contextualized models revealed differences between these stresses. While both stresses had reducing power bottlenecks, heat stress had additional energy generation bottlenecks.We also performed thermodynamic driving force analysis, revealing thermodynamics-reducing power-energy generation axis dictating the nature of temperature stress responses. Thus, a temperaturetolerant maize ideotype can …

Formal Concept Analysis For Image Classification And Machine Learning Models For Anti-Crispr Protein Discovery In Bioinformatics, Minal Khatri

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This study investigates two critical areas in bioinformatics: enhancing transparency in medical image analysis and advancing the discovery of Anti-CRISPR (Acr) proteins, which have potential in developing more precise and controlled CRISPR-Cas gene editing tools. While CNN’s are increasingly applied in critical fields like medical diagnosis, understanding their decision-making process remains a challenge. Although visualization techniques like Saliency maps offer insights into CNN’s decision-making for individual images, they do not explicitly establish a relationship between the high-level features learned by CNN’s and the class labels across dataset. To bridge this gap, Formal Concept Analysis (FCA) framework is leveraged as a …

Intraspecific Variation Of Morphological Traits Backed Up With Molecular Evidence Votes For Re‑Appraisal Of Hitherto Distinguished Balaustium Species—A Case Study Of Balaustium Murorum (Acariformes: Parasitengona, Erythraeidae), Joanna Mąkol, Magdalena Felska

Harold W. Manter Laboratory of Parasitology: Library Materials

Molecular examination of representatives of Balaustium from several populations in SW Poland, performed using the sequence data from the mitochondrial cytochrome c oxidase subunit I, confirmed their common specific affiliation and identity with Balaustium murorum. The potential presence of distinct species in the studied material, preliminarily inferred from the discovery of clusters as a result of Principal Component Analysis exploring the metric data sets, was rejected due to the finding of only one haplotype, at intra- and inter-population sampling. An insight into meristic traits in larvae, focused on chaetotaxy of legs, revealed wider variation than hitherto recognized for the …

Soft Microreactors For The Deposition Of Microstructures And The Related Surface Chemistries Of Polymeric Materials, Jessica Wagner

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The precise control over small volumes of liquids is of great interest to various fields such as biotechnology, drug development, and diagnostics. Working at small scales reduces cost, time, and waste, which is why microfluidic lab-on-chip technologies have become popular in a wide range of industries and applications. Additionally, there are differences in properties such as mass transport and heat dissipation at the micron scale compared to in bulk. Microfluidic devices contain several interfaces to consider when preparing to fabricate devices. The substrate/device, substrate/solution, and solution/device interfaces are all of importance and must carefully be tuned depending on the desired …

Transportation Components Of The City Of Bennet Comprehensive Plan And Downtown Economic Development Plan, Kyle Mclaughlin

Community and Regional Planning Program: Theses

In partnership with the City of Bennet, the University of Nebraska, and Marvin Planning Consultants, this project assisted the creation of the City’s Comprehensive Plan and Downtown Economic Development Plan by creating a transportation focused report as a supplement to those plans. The project operates in six sections; Introduction and Overview, Evaluate the Present, Engage the Community, Recommendations, Strategies, and Policies, Implementation and Funding, and Monitoring and Evaluation. The project scope included existing conditions understanding, qualitative and quantitative transportation analysis, public engagement and stakeholder meetings, coordination with two plan creators, identifying transportation improvements, description of implementation steps, overview of available …

A Memoir Of The Neutzner Family, Hannelore Neutzner Rogers

Archives & Special Collections

A memoir describing the forced expulsion and resettlement the Neutzner family and their relatives from Czechoslovakia to the German Sudetenland during World War II and their later emigration to the United States.

Convolutional Neural Network-Based Gene Prediction Using Buffalograss As A Model System, Michael Morikone

Complex Biosystems Program: Dissertations and Student Research

The task of gene prediction has been largely stagnant in algorithmic improvements compared to when algorithms were first developed for predicting genes thirty years ago. Rather than iteratively improving the underlying algorithms in gene prediction tools by utilizing better performing models, most current approaches update existing tools through incorporating increasing amounts of extrinsic data to improve gene prediction performance. The traditional method of predicting genes is done using Hidden Markov Models (HMMs). These HMMs are constrained by having strict assumptions made about the independence of genes that do not always hold true. To address this, a Convolutional Neural Network (CNN) …

Continuous Time Recurrent Network For Human Activity Detection, Abdallah Al Zubi

Durham School of Architectural Engineering and Construction: Dissertations, Theses, and Student Research

Human activity detection is crucial to personalize the control of the building environment. For example, understanding certain human activities (e.g., walking, sitting, etc.) for an occupant in a building helps provide the proper thermal comfort control. However, these applications require large-scale neural networks that are challenging to implement and train.

In this thesis, we implemented a continuous-time recurrent neural network implementation (CTRNN) network that can solve real-time human activity detection with a smaller-size network. The CTRNN uses differential equations with a time constant to describe the neuron equations. It was implemented and trained for the first time using TensorFlow. Specifically, …

Characterization Of Adipocyte Mechanical Properties And Stretch Control Of Mechanosignaling In Adipocytes, Tasneem Bouzid

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Obesity has reached global epidemic levels in recent decades and is the leading risk factor for type-2 diabetes (T2D). Adipose tissue behaves as a link between obesity and T2D, with dysfunctional extracellular matrix (ECM) remodeling, adipokine secretion and lipid metabolism leading to insulin resistance. The extracellular mechanophysical milieus is understood to regulate adipocyte differentiation and function through activation of mechanosensory machinery and related pathways. Therefore, exploring the adipocytic response to mechanical loading can provide great pathophysiological insight into obesity and T2D.

Adipose tissue is exposed to various compound forces due to weight-bearing and movement, and adipocyte stiffness influences stress distribution …

Convolutional Neural Network-Based Gene Prediction Using Buffalograss As A Model System, Michael Morikone

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The task of gene prediction has been largely stagnant in algorithmic improvements compared to when algorithms were first developed for predicting genes thirty years ago. Rather than iteratively improving the underlying algorithms in gene prediction tools by utilizing better performing models, most current approaches update existing tools through incorporating increasing amounts of extrinsic data to improve gene prediction performance. The traditional method of predicting genes is done using Hidden Markov Models (HMMs). These HMMs are constrained by having strict assumptions made about the independence of genes that do not always hold true. To address this, a Convolutional Neural Network (CNN) …

Low-Power, Event-Driven System On A Chip For Charge Pulse Processing Applications, Joseph Schmitz

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation presents an electronic architecture and methodology capable of processing charge pulses generated by a range of sensors, including radiation detectors and tactile synthetic skin. These sensors output a charge signal proportional to the input stimulus, which is processed electronically in both the analog and digital domains. The presented work implements this functionality using an event-driven methodology, which greatly reduces power consumption compared to standard implementations. This enables new application areas that require a long operating time or compact physical dimensions, which would not otherwise be possible. The architecture is designed, fabricated, and tested in the aforementioned applications to …

Nebraska Elementary School Teachers’ Desired Principal Leadership Qualities And Teachers’ Interest Of Becoming A Principal, Gene James Russel

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The purpose of this study is to examine Nebraska elementary teachers’ desired leadership qualities and teachers’ interest of becoming a principal. Part of this study is a replication of William A. Schernikau’s dissertation completed at the University of Nebraska-Lincoln in 1991. Part of William A. Schernikau’s study was designed to replicate a study that was conducted in 1964 by Ward Campbell at the University of Southern California.

In Schernikau’s (1991) study, there are seven categories of principal leadership qualities that was examined based on elementary teachers’ perceptions: (a) management skills, (b) staff relations, (c) community relations, (d) personal characteristics, (e) …

Uv Dynamics Of Different Ring Molecules Studied By Ultrafast Electron Diffraction, Sajib Kumar Saha

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Understanding natural light-induced phenomena requires a direct viewing of atomic motion during structural evolution, which, in turn, facilitates controlling and manipulating these light-induced processes. Ultrafast Electron Diffraction (UED) is a structure-sensitive technique that can probe electronic and nuclear dynamics at sub-angstrom spatial and femtosecond time scales. UED has become a vital tool for studying photo-induced molecular dynamics and underlying science. Organic ring systems are prevalent in biology, materials, and pharmaceuticals. Their synthesis and transformation are fundamental in synthetic chemistry, influencing various fields. We used UV photons to photo-excite different cyclic molecules and investigated their photo-dynamics using gas phase UED. The …

The Development And Evolution Of The Soil Health Nutrient Tool (Aka Haney Test) After Ten Years Of Implementation In A Commercial Agricultural Laboratory, Lance Michael Gunderson

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The growing focus on soil health and regenerative agriculture has brought about the need for new integrated approaches for the analysis of soil. Prior, commercial agricultural laboratories relied on methods to measure chemical properties of the soil, such as pH and nutrients. The Soil Health Nutrient Tool (aka Haney Test) developed by Dr. Rick Haney (United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Blackland Research and Extension Station, Temple, Texas) integrates chemical and biological properties to provide a more holistic understanding of soil fertility management. Following adoption by commercial laboratories in 2013, criticisms regarding variability in measurements and lack …

Precipitation And Greenness In Pastoral Lands Of East Turkana, Kenya, Paul Akpejeluh

School of Natural Resources: Dissertations, Theses, and Student Research

Pastoralism has long supported livelihoods and provided essential ecosystem services in landscapes of East Africa. Vegetation productivity is central to the functioning of pastoral systems but may be affected by changes in climate and landuse. Vegetation monitoring is important for understanding the effects of global change in pastoral lands; however, it can be time and resource intensive. Remote sensing provides opportunities for efficient multi-scale monitoring of vegetation and climatic drivers. In this thesis, I explore the utility of satellite and UAV remote sensing for monitoring vegetation and precipitation trends and relationships in the East of Lake Turkana Region of northern …

Connecting The Nebraska Water Quality Index To The Aquatic Microbial Community Of The North Platte River Basin, Nebraska, Paula R. Guastello

School of Natural Resources: Dissertations, Theses, and Student Research

The Nebraska Water Quality Index, under development by the Nebraska Department of Environment and Energy, summarizes in a single value eight environmental parameters that have been monitored in Nebraska for nearly 20 years. Water quality parameters including those used in the Nebraska Water Quality Index have been shown in previous studies to impact bacterial growth. As such, this index has the potential to correlate with the freshwater microbial community. Here, I relate the Nebraska Water Quality Index to microbial community composition and structure using 16S rRNA gene amplicon sequence data collected from the North Platte River Basin, Nebraska. This index …

Characterization And Evaluation Of Bioactivity Of Dry Edible Bean And Bean Derived Small Peptides, Bikram Prasad Upadhyaya

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Obesity, diabetes, and their metabolic complications continue to be one of the major global public health concerns with a few effective treatment options. Although regular exercise and a well-balanced diet that includes calories from pulses can be recommended, much remains to be elucidated about the health effects of the various bioactive compounds including peptides and polyphenols present in pulses. Most of the previous studies have focused on individual dietary compounds and only a few investigated the synergistic effect of active compounds in modulating human health. Hence this dissertation aimed first, to provide a comparative evaluation of the overall therapeutic value …

Meta-Analysis Of Insulated Concrete Wall Panel Design Methods For Shear And Flexure Behavior, Maryam Al-Bayati

Durham School of Architectural Engineering and Construction: Dissertations, Theses, and Student Research

Insulated Concrete wall panels have been designed and constructed since the early 1950s with various shear ties, dimensions, and methods; nonetheless, thermal bridging and rational design are still a concern. Many companies have recently developed plastic connectors that have gradually replaced solid concrete sections and steel connectors due to their superior thermal efficiency and strength. However, there is no generally accepted method for predicting the behavior of sandwich wall panels in structural engineering practice or codes, but many methods have been used since the early 1920. This study aims to evaluate the accuracy of current methods for predicting the flexural …

Improving Yield And Profit In Smallholder Oil Palm Fields Through Better Agronomy, Hendra Sugianto

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Oil palm accounts for 40% of global vegetable oil production and Indonesia contributed 59% of the total production, with total planted area nearly 15 M ha in 2020. About 40% of the planted area is managed and owned by smallholders, and two thirds of them are independent, they are not bounded to a large plantation. Current efforts to increase yield of independent smallholder (ISH) fields focus on replanting programs promoting use of certified planting material, with little attention to improve management practices, in particular, plant nutrition. Here we investigated the degree to which poor nutrition can explain large yield gaps …

Students' Attitudes Towards Animals Influences Youth Development Constructs Based On Interactions With Different Animal Species Prior To College, Allison K. Pachunka

Department of Animal Science: Dissertations, Theses, and Student Research

Human-animal interactions (HAI) are commonplace in society and play a consequential role in a variety of situations such as companion animal ownership, agriculture, or youth programs such as 4-H or FFA. Interacting with animals has been shown to provide developmental benefits to children. Positive youth development (PYD), measured by the Five Cs Model, is a framework that focuses on fostering youth’s potential through positive activities which has been studied specifically in 4-H. However, this framework has not been applied to other organizations such as the National FFA Organization (FFA) or to other young adults with less formal interactions with animals. …

Hydroxyapatite-Based Coatings On Silicon Wafers And Printed Zirconia, Antoine Chauvin

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

Dental surgery needs a naturally attract implant design that can ensure both osseointegration and soft tissue integration. Hydroxyapatite (HAp), the main mineral constituent of dentine and tooth enamel, is commonly used as a coating component, notably for overlaying titanium– or ceramics–based implants. This thesis aims to investigate the behavior of a HAp-based coating, specifically designed to be compatible with a porous substrate. Coating layers are made by sol–gel dip coating by immersion of porous substrates made by additive manufacturing into solutions of HAp, having been mixed with polyethyleneimine (PEI), to improve the adhesion of HAp on the substrate. First, the …

A Study Of The Behavior Of Light And Matter Using Computer Simulations And Experimental Techniques, Bret Alan Gergely

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This thesis comprises four individual chapters, each showcasing unique research and findings. The first chapter details the simulation of an experiment that was performed by Shahriar S. Afshar. He claimed in 2007 that his modified version of the double-slit experiment violated complementarity. A priniciple developed by Niels Bohr. The experiment is simulated using the path integral formulation of quantum mechanics and agreement is found with the wave-particle duality relation given by Englert, Greenberg and Yasin (EGY). It is concluded that the use of Afshar’s experiment to provide a testbed for quantum mechanical interpretations is limited. The second chapter presents an …