Digital Commons Network^™

Influenza A Virus Surveillance, Infection And Antibody Persistence In Snow Geese (Anser Caerulescens), Susan A. Shriner, J. Jeffrey Root, Jeremy W. Ellis, Kevin T. Bentler, Kaci K. Vandalen, Thomas Gidlewski, Sarah N. Bevins

United States Department of Agriculture Wildlife Services: Staff Publications

Some snow geese (Anser caerulescens) migrate between Eurasia and North America and exhibit high seroprevalence for influenza A viruses (IAVs). Hence, these birds might be expected to play a role in intercontinental dispersal of IAVs. Our objective in this manuscript was to characterize basic incidence and infection characteristics for snow geese to assess whether these birds are likely to significantly contribute to circulation of IAVs. Thus, we 1) estimated snow goose infection prevalence by summarizing > 5,000 snow goose surveillance records, 2) experimentally infected snow geese with a low pathogenic IAV (H4N6) to assess susceptibility and infection dynamics and …

Social Structure Defines Spatial Transmission Of African Swine Fever In Wild Boar, Kim M. Pepin, Andrew J. Golnar, Tomasz Podgórski

United States Department of Agriculture Wildlife Services: Staff Publications

The spatial spread of infectious disease is determined by spatial and social processes such as animal space use and family group structure. Yet, the impacts of social processes on spatial spread remain poorly understood and estimates of spatial transmission kernels (STKs) often exclude social structure. Understanding the impacts of social structure on STKs is important for obtaining robust inferences for policy decisions and optimizing response plans. We fit spatially explicit transmission models with different assumptions about contact structure to African swine fever virus surveillance data from eastern Poland from 2014 to 2015 and evaluated how social structure affected inference of …

Occurrence Of Mesocarnivores In Montane Sky Islands: How Spatial And Temporal Overlap Informs Rabies Management In A Regional Hotspot, Amanda M. Veals, John Koprowski, David L. Bergman, Kurt C. Vercauteren, David B. Wester

United States Department of Agriculture Wildlife Services: Staff Publications

Interspecific interactions among mesocarnivores can influence community dynamics and resource partitioning. Insights into these interactions can enhance understanding of local ecological processes that have impacts on pathogen transmission, such as the rabies lyssavirus. Host species ecology can provide an important baseline for disease management strategies especially in biologically diverse ecosystems and heterogeneous landscapes. We used a mesocarnivore guild native to the southwestern United States, a regional rabies hotspot, that are prone to rabies outbreaks as our study system. Gray foxes (Urocyon cinereoargenteus), striped skunks (Mephitis mephitis), bobcats (Lynx rufus), and coyotes (Canis latrans) share large portions of their geographic ranges …

Sars-Cov-2 Exposure In Wild White-Tailed Deer (Odocoileus Virginianus), Jeffrey C. Chandler, Sarah N. Bevins, Jeremy W. Ellis, Timothy J. Linder, Rachel M. Tell, Melinda Jenkins-Moore, J. Jeffrey Root, Julianna B. Lenoch, Suelee Robbe-Austerman, Thomas J. Deliberto, Tom Gidlewski, Mia Kim Torchetti, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Widespread human SARS-CoV-2 infections combined with human–wildlife interactions create the potential for reverse zoonosis from humans to wildlife. We targeted white-tailed deer (Odocoileus virginianus) for serosurveillance based on evidence these deer have angiotensin-converting enzyme 2 receptors with high affinity for SARS-CoV-2, are permissive to infection, exhibit sustained viral shedding, can transmit to conspecifics, exhibit social behavior, and can be abundant near urban centers. We evaluated 624 prepandemic and postpandemic serum samples from wild deer from four US states for SARS-CoV-2 exposure. Antibodies were detected in 152 samples (40%) from 2021 using a surrogate virus neutralization test. A subset of samples …

Spring Break Or Heart Break? Extending Valence Bias To Emotional Words, Nicholas R. Harp, Catherine C. Brown, Maital Neta

Department of Psychology: Faculty Publications

Ambiguous stimuli are useful for assessing emotional bias. For example, surprised faces could convey a positive or negative meaning, and the degree to which an individual interprets these expressions as positive or negative represents their “valence bias.” Currently, the most well- wellvalidated ambiguous stimuli for assessing valence bias include nonverbal signals (faces and scenes), overlooking an inherent ambiguity in verbal signals. This study identified 32 words with dual-valence ambiguity (i.e., relatively high intersubject variability in valence ratings and relatively slow response times) and length-matched clearly valenced words (16 positive, 16 negative). Preregistered analyses demonstrated that the words-based valence bias correlated …

The Effects Of Phosphocreatine Disodium Salts Plus Blueberry Extract Supplementation On Muscular Strength, Power, And Endurance, John Paul V. Anders, Tyler J. Neltner, Robert W. Smith, Joshua L. Keller, Terry J. Housh, F Joseph Daugherty, Michael S. Tempesta, Alekha K. Dash, Daniel J. Munt, Richard J. Schmidt, Glen O. Johnson

Department of Nutrition and Health Sciences: Faculty Publications

Background: Numerous studies have demonstrated the efficacy of creatine supplementation for improvements in exercise performance. Few studies, however, have examined the effects of phosphocreatine supplementation on exercise performance. Furthermore, while polyphenols have antioxidant and anti-inflammatory properties, little is known regarding the influence of polyphenol supplementation on muscular strength, power, and endurance. Thus, the purpose of the present study was to compare the effects of 28 days of supplementation with phosphocreatine disodium salts plus blueberry extract (PCDSB), creatine monohydrate (CM), and placebo on measures of muscular strength, power, and endurance.

Methods: Thirty-three men were randomly assigned to consume either PCDSB, CM, …

Terrestrial Ecological Risk Analysis Via Dietary Exposure At Uranium Mine Sites In The Grand Canyon Watershed (Arizona, Usa), Jo Ellen Hinck, Danielle Cleveland, Bradley E. Sample

United States Geological Survey: Staff Publications

The U.S. Department of the Interior recently included uranium (U) on a list of mineral commodities that are considered critical to economic and national security. The uses of U for commercial and residential energy production, defense applications, medical device technologies, and energy generation for space vehicles and satellites are known, but the environmental impacts of uranium extraction are not always well quantified. We conducted a screening-level ecological risk analysis based on exposure to miningrelated elements via diets and incidental soil ingestion for terrestrial biota to provide context to chemical characterization and exposures at breccia pipe U mines in northern Arizona. …

Metabarcoding Assays For The Detection Of Freshwater Mussels (Unionida) With Environmental Dna, Katy E. Klymus, Catherine A. Richter, Nathan Thompson, Jo Ellen Hinck, Jess W. Jones

United States Geological Survey: Staff Publications

Freshwater mussels of the order Unionida are a widely distributed taxon that are important in maintaining freshwater ecosystems and are also highly imperiled throughout the world. Monitoring of mussel populations with environmental DNA (eDNA) is an attractive alternative to traditional methods because it is noninvasive and requires less labor and taxonomic knowledge from field personnel. We developed eDNA metabarcoding assays specific to freshwater mussels and tested them at six sites in the Clinch River, located in the southeastern United States. Our objective was to determine the utility of eDNA metabarcoding for future monitoring of mussel populations and restoration efforts in …

Detection Of Two Dissimilar Chronic Wasting Disease Isolates In Two Captive Rocky Mountain Elk (Cervus Canadensis) Herds: Two Distinctive Chronic Wasting Disease Isolates Identified In Captive Elk, Tracy A. Nichols, Eric M. Nicholson, Yihui Liu, Wanyin Tao, Terry R. Spraker, Michael Lavelle, Justin W. Fischer, Qingzhong Kong, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Chronic wasting disease (CWD) continues to spread in both wild and captive cervid herds in North America and has now been identified in wild reindeer and moose in Norway, Finland and Sweden. There is limited knowledge about the variety and characteristics of isolates or strains of CWD that exist in the landscape and their implications on wild and captive cervid herds. In this study, we evaluated brain samples from two captive elk herds that had differing prevalence, history and timelines of CWD incidence. Site 1 had a 16-year history of CWD with a consistently low prevalence between 5% and 10%. …

Environmental Dna For Conservation, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Biodiversity must be documented before it can be conserved. However, it may be difficult to document species with few individuals (Thompson, 2013; Goldberg et al., 2016), thus it requires a multitude of tools to detect species that occur in low numbers or are elusive (see the various chapters in this volume). One tool that has become useful for conservation efforts utilizes environmental DNA, which is DNA shed into the environment by organisms (eDNA; Taberlet et al., 2018). Typically this involves taking environmental samples such as soil, water, air, or using biological surrogates for sampling biodiversity (e.g. leeches, sponges, carrion flies, …

Allometric Regression Of Snake Body Length From Head Image Measurements, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

As in many fields of wildlife research and management, camera devices and photogrammetry have become an integral part of the toolkit for exploring otherwise‐unseen aspects of the biology, behavior, and control of the invasive brown treesnake (Boiga irregularis) on Guam. Because brown treesnakes are cryptic and nocturnal, and nearly all aspects of their ecology are influenced by snake size, methods are needed to estimate snake size from images captured by infrared wildlife cameras. Unfortunately, it is difficult to capture images of an entire snake’s length at a controlled distance from a simple camera setup. Here, I describe the …

Increased Abundance Of The Common Raven Within The Ranges Of Greater And Gunnison Sage-Grouse: Influence Of Anthropogenic Subsidies And Fire, Jonathan B. Dinkins, Lindsey R. Perry, Jeffrey L. Beck, Jimmy D. Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

The common raven (Corvus corax; raven) is native to North America and has increased in abundance, especially throughout western North America, during the last century. Human subsidies have facilitated raven dispersal into less suitable habitats and enabled these populations to maintain higher annual survival and reproduction. Concomitantly, overabundant raven populations are impacting other native at-risk species such as the greater sage-grouse (Centrocercus urophasianus) and potentially the Gunnison sage-grouse (C. minimus). Using Breeding Bird Survey data from 1995–2014, we evaluated raven count data to quantitatively describe changes in abundance and expansion into sagebrush ( …

A Novel Technique To Improve Capture Success Of Common Ravens, Lindsey R. Perry, Terrah M. Owens, Zachary T. Slick, Jimmy Taylor, Jonathan B. Dinkins

United States Department of Agriculture Wildlife Services: Staff Publications

Traditional trapping techniques for common ravens (Corvus corax; raven) require significant effort, often produce low capture rates, and cannot be used in some situations. We designed a 3-m noose pole to secure ravens from nocturnal roost locations while using a strobe spotlight to temporarily disorient them. We collected measures of trapping efficiency and contrasted them with padded leghold traps also used in the study. We effectively implemented our noose pole method in July and August of 2018, 2019, and 2020 in the Baker and Cow Lakes sage-grouse (Centrocercus urophasianus) Priority Areas of Conservation in eastern Oregon, USA, which yielded trapping …

Nanomaterials In The Environment, Human Exposure Pathway, And Health Effects: A Review, Arindam Malakar, Sushil R. Kanel, Chittaranjan Ray, Daniel D. Snow, Mallikarjuna N. Nadagouda

Daugherty Water for Food Global Institute: Faculty Publications

Nanomaterials (NMs), both natural and synthetic, are produced, transformed, and exported into our environment daily. Natural NMs annual flux to the environment is around 97% of the total and is significantly higher than synthetic NMs. However, synthetic NMs are considered to have a detrimental effect on the environment. The extensive usage of synthetic NMs in different fields, including chemical, engineering, electronics, and medicine, makes them susceptible to be discharged into the atmosphere, various water sources, soil, and landfill waste. As ever-larger quantities of NMs end up in our environment and start interacting with the biota, it is crucial to understand …

Baseflow Nitrate Dynamics Within Nested Watersheds Of An Agricultural Stream In Nebraska, Usa, Galen Richards, Troy E. Gilmore, Aaron R. Mittelstet, Tiffany Messer, Daniel D. Snow

Daugherty Water for Food Global Institute: Faculty Publications

There is a need to evaluate high surface nitrate concentrations across agricultural watersheds, both spatially and temporally, to increase understanding of source and timing of nitrogen loads in streams and rivers. Bazile Creek is a high-nitrate stream originating in the agriculturally intensive Bazile Groundwater Management Area of Eastern Nebraska, USA. It is a gaining stream that receives groundwater with high nitrate concentrations originating from nonpoint sources. The objective of this study was to determine spatial and temporal variability of baseflow nitrate concentrations in Bazile Creek and its tributaries and to relate this variability to watershed characteristics. Surface-water nitrate samples were …

Surveillance Of Plasticizers, Bisphenol A, Steroids And Caffeine In Surface Water Of River Ganga And Sundarban Wetland Along The Bay Of Bengal: Occurrence, Sources, Estrogenicity Screening And Ecotoxicological Risk Assessment, Paromita Chakraborty, Nancy W. Shappell, Moitraiyee Mukhopadhyay, Sathaporn Onanong, Daniel D. Snow

Daugherty Water for Food Global Institute: Faculty Publications

The transboundary River Ganga serves as a conduit for meltwater from the Himalayas and is a major freshwater source for two thirds of Indian population before emptying into the Sundarban Delta, the largest estuary in the Bay of Bengal. Endocrine disrupting compounds (EDCs) such as phthalic acid esters (PAEs) and bisphenol A (BPA) used as organic plastic additives can pollute the aquatic environment receiving plastic litter. Hence, we have investigated these EDCs in water samples from Ganga and Sundarban wetland of India. Since these compounds exhibit estrogenic potential, we have further measured steroids and evaluated the estrogenic activity (estradiol equivalents, …

Transmission Routes Of The Microbiome And Resistome From Manure To Soil And Lettuce, Yuepeng Sun, Daniel D. Snow, Harkamal Walia, Xu Li

Daugherty Water for Food Global Institute: Faculty Publications

The land application of animal manure can introduce manure microbiome and resistome to croplands where food crops are grown. The objective of this study was to characterize the microbiome and resistome on and in the leaves of lettuce grown in manured soil and identify the main transmission routes of microbes and antibiotic resistance genes (ARGs) from soil to the episphere and endosphere of lettuce. Shotgun metagenomic results show that manure application significantly altered the composition of the microbiome and resistome of surface soil. SourceTracker analyses indicate that manure and original soil were the main source of the microbiome and resistome …

Metagenomic Insights Of The Infant Microbiome Community Structure And Function Across Multiple Sites In The United States, Giorgio Casaburi, Rebbeca M. Duar, Heather Brown, Ryan D. Mitchell, Sufyan Kazi, Stephanie Chew, Orla Cagney, Robin L. Flannery, Karl G. Sylvester, Steven A. Frese, Bethany M. Henrick, Samara L. Freeman

Department of Food Science and Technology: Faculty Publications

The gut microbiome plays an important role in early life, protecting newborns from enteric pathogens, promoting immune system development and providing key functions to the infant host. Currently, there are limited data to broadly assess the status of the US healthy infant gut microbiome. To address this gap, we performed a multi-state metagenomic survey and found high levels of bacteria associated with enteric inflammation (e.g. Escherichia, Klebsiella), antibiotic resistance genes, and signatures of dysbiosis, independent of location, age, and diet. Bifidobacterium were less abundant than generally expected and the species identified, including B. breve, B. longum and B. bifidum, had …

Biodiversity Of The Coccidia (Apicomplexa: Conoidasida) In Vertebrates: What We Know, What We Do Not Know, And What Needs To Be Done, Donald W. Duszynski

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Over the last two decades my colleagues and I have assembled the literature on a good percentage of most of the coccidians (Conoidasida) known, to date, to parasitise: Amphibia, four major lineages of Reptilia (Amphisbaenia, Chelonia, Crocodylia, Serpentes), and seven major orders in the Mammalia (Carnivora, Chiroptera, Lagomorpha, Insectivora, Marsupialia, Primates, Scandentia). These vertebrates, combined, comprise about 15,225 species; only about 899 (5.8%) of them have been surveyed for coccidia and 1,946 apicomplexan valid species names or other forms are recorded in the literature. Based on these compilations and other factors, I extrapolated that there yet may be an additional …

Forages For Conservation And Improved Soil Quality, John F. Obrycki, Douglas L. Karlen

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Forages provide several soil benefits, including reduced soil erosion, reduced water runoff, improved soil physical properties, increased soil carbon, increased soil biologic activity, reduced soil salinity, and improved land stabilization and restoration when grown continuously or as part of a crop rotation. Ongoing research and synthesis of knowledge have improved our understanding of how forages alter and protect soil resources, thus providing producers, policymakers, and the general public information regarding which forage crops are best suited for a specific area or use (e.g. hay, grazing or bioenergy feedstock). Forages can be produced in forestland, range, pasture, and cropland settings. These …

Antibacterial Activities Of Nepetalactones Against Public Health-Related Pathogens, Anuradha Ghosh, Enya V. Zhu, Haichuan Wang, Ludek Zurek, Junwei J. Zhu

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The antimicrobial activities of (Z,E)- and (E,Z)-nepetalactones, 2 major compositional compounds from the essential oil of catnip (Nepeta cataria), were first discovered from fly larval development media studies with over 98% inhibition of bacterial growth. Further investigation demonstrated inhibition of the growth of various bacterial species of public health significance. Catnip oil showed antibacterial activity against 5 Gram-positive and 9 Gram-negative bacteria. The antimicrobial activity varied among the original essential oil from the plant and its major compositional compounds as a blended mixture or an individual compound. Growth inhibition was observed against 5 Neisseria species, with particularly strong inhibition against …

Maintaining The Fence: Establishing And Reclaiming Your Boundaries, Becky Haddad , Ed.

Department of Agricultural Leadership, Education, and Communication: Faculty Publications

Editor Comments: Boundaries? We Don’t Need No Stinking Boundaries... Or Do We?... by Gaea Hock

Theme Editor Comments: Lessons from the Giving Tree .....by Becky Haddad

Theme Articles: A Letter to the Profession.... by Haley Traini

Balance in the Busyness.... by Roobie Richards

The Boundaries that Weren’t..... by Bibiana Gifft An Early Introduction.... by Amber Rice and Quint Molina Prioritizing Boundaries... by Hannah Wedger

The How’s and Why’s of Building a Fence.. by JoAnn Pfeiffer Avoiding the Burn... by Jay Solomoson and Trent Wells

Book Review: Boundaries by Dr. Henry Cloud and Dr. John Townsend .... by Kayla Loewenhagen

Ready …

Testing A Global Standard For Quantifying Species Recovery And Assessing Conservation Impact, Molly K. Grace, John Carroll, 201 Other Scholars

School of Biological Sciences: Faculty Publications

Recognizing the imperative to evaluate species recovery and conservation impact, in 2012 the International Union for Conservation of Nature (IUCN) called for development of a “Green List of Species” (now the IUCN Green Status of Species). A draft Green Status framework for assessing species’ progress toward recovery, published in 2018, proposed 2 separate but interlinked components: a standardized method (i.e., measurement against benchmarks of species’ viability, functionality, and preimpact distribution) to determine current species recovery status (herein species recovery score) and application of that method to estimate past and potential future impacts of conservation based on 4 metrics ( …

Enabling Conceptual Learning To Prepare Students For The New World Of Nutrition Communication, Sabine Zempleni

UNL Faculty Course Portfolios

During the last decades, the flow of nutrition information between nutrition professionals and consumer has changed profoundly. Newest scientific findings are freely available from public data bases and often make it prematurely into the media and social media. Therefore, students need to require a precise knowledge of nutrition concepts, be able to explain the concepts to the consumer, and apply those concepts to eating decisions. Many students have not made the transition from memorizing individual facts to conceptual learning. Students will need appropriate learning tools and instructions to help them make this transition successfully. The goal of this Peer Review …

Vbms 403: Integrated Principles And Prevention Of Livestock Diseases, Christina L. Topliff

UNL Faculty Course Portfolios

This portfolio documents the teaching objectives, strategies, assessments, and changes implemented for VBMS 403: Integrated Principles and Prevention of Livestock Diseases, an Achievement-Centered Education (ACE) 10 Capstone course taught during the Spring Semester through the School of Veterinary Medicine and Biomedical Sciences at the University of Nebraska-Lincoln. Teaching methods and course activities included traditional lecturing with quizzes and examinations, in-class discussions, short reading assignments, and the generation of a scholarly term paper demonstrating broad knowledge, technical proficiency, information collection, synthesis, interpretation, and presentation. This portfolio documents the qualitative and quantitative methods used to assess the course learning objectives (goals). My …

Fdst 403/803 – Food Quality Assurance, Byron D. Chaves

UNL Faculty Course Portfolios

Food Science and Technology (FDST) 403: Food Quality Assurance is an upper level required course for FDST undergraduate majors at the University of Nebraska-Lincoln. The course covers food safety regulations, food safety management systems, and statistical process control applied to food safety and quality in food manufacturing. This Peer Review of Teaching Portfolio documents the course analysis and reflection for spring 2021. Two mid-semester student course evaluations were performed on March 1 and April 5, the lecture immediately after the midterm exams. Anonymous paper and online surveys were filled out during class time asking students to reflect on the course …

Peer Review Of Teaching Portfolio: Learning & Motivation (Psyc 368), Jacquelyn Omelian

UNL Faculty Course Portfolios

This portfolio is a reflection and report on the peer review process undertaken during the Spring 2021 semester at the University of Nebraska – Lincoln. The work presented here provides a description of the PSYC 368: Learning and Motivation course as it was delivered in an asynchronous, 14-week format as a result of the COVID-19 pandemic. This large (150 student) lecture-style course is open to any student who has completed Introduction to Psychology and attracts students from across multiple colleges and majors. This portfolio has a particular emphasis on a series of major assignments in the course and how they …

Stat 850 Course Portfolio, Susan Vanderplas

UNL Faculty Course Portfolios

Stat 850 is an introduction to statistical computing, providing students with the computing skills they need to do research, write papers, and succeed in statistics and quantitative fields. In this portfolio, I examine the impact of increased discussion of pseudocode and flow charts on students’ ability to solve multi-step problems. This additional scaffolding, while not completely effective, does seem to have resulted in lower student frustration, though it is not clear that this is a result of the intervention and not just a consequence of a different group of students with different experience in computational programming.

A Benchmark Course Portfolio For Slpa 453: Neurological Foundations Of Speech And Language, Yingying Wang Dr.

UNL Faculty Course Portfolios

This benchmark course portfolio reflects the iterative design process for SLPA 453: Neurological Foundations of Speech and Language. This course covers the foundational knowledge of neuroanatomy and neurophysiology of the central and peripheral nervous system and the neurology of the human communication processes, and the classification of impairments based on the lesion sites in the human brain. I analyzed student learning through various activities that align with two main course goals: (1) demonstrate knowledge of the neurology of human communication processes; (2) demonstrate the ability to integrate information pertaining to normal and abnormal human development across the life span. Based …

Esperanza Rising And Identity: Exploring Literature And Self In Upper Elementary School, Emma Fuller

Honors Program: Senior Projects (Public)

Upper elementary students benefit from exposure to windows and mirrors in literature. The term “mirrors” refers to when students can relate to characters and situations, and see their own lives valued in an academic context. Mirrors are important for representation in schools because it allows students to reflect on their own learning. “Windows” allow students to see a perspective into other people’s lives. They are important because they encourage reflection on different ideas and empathy among students. One of many literary works with strong “windows” and “mirrors” is Pam Munoz Ryan’s Esperanza Rising. In this Senior Project, I focused on …