Digital Commons Network^™

Anti-Nlrp3 Inflammasome Natural Compounds: An Update, Baolong Liu, Jiujiu Yu

Department of Nutrition and Health Sciences: Faculty Publications

The nucleotide-binding domain and leucine-rich repeat related (NLR) family, pyrin domain containing 3 (NLRP3) inflammasome is a multimeric protein complex that recognizes various danger or stress signals from pathogens, the host, and the environment, leading to activation of caspase-1 and inducing inflammatory responses. This pro-inflammatory protein complex plays critical roles in pathogenesis of a wide range of diseases including neurodegenerative diseases, autoinflammatory diseases, and metabolic disorders. Therefore, intensive efforts have been devoted to understanding its activation mechanisms and to searching for its specific inhibitors. Approximately forty natural compounds with anti-NLRP3 inflammasome properties have been identified. Here, we provide an update …

Identification Of Anti-Inflammatory Vesicle-Like Nanoparticles In Honey, Xingyi Chen, Boalong Liu, Xingzhi Li, Thuy T. An, You Zhou, Gang Li, Judy Wu-Smart, Sophie Alvarez, Michael J. Naldrett, James Eudy, Gregory Kubik, Richard A. Wilson, Stephen D. Kachman, Juan Cui, Jiujiu Yu

Department of Nutrition and Health Sciences: Faculty Publications

Honey has been used as a nutrient, an ointment, and a medicine worldwide for many centuries. Modern research has demonstrated that honey has many medicinal properties, reflected in its anti-microbial, anti-oxidant, and anti-inflammatory bioactivities. Honey is composed of sugars, water and a myriad of minor components, including minerals, vitamins, proteins and polyphenols. Here, we report a new bioactive component‒vesicle-like nanoparticles‒in honey (H-VLNs). These HVLNs are membrane-bound nano-scale particles that contain lipids, proteins and small-sized RNAs. The presence of plant-originated plasma transmembrane proteins and plasma membrane-associated proteins suggests the potential vesicle-like nature of these particles. H-VLNs impede the formation and activation …

Longitudinal Assessment Of The Bovine Ocular Bacterial Community Dynamics In Calves, Alison Bartenslager, Nirosh D. Aluthge, John Dustin Loy, Matthew M. Hille, Matthew L. Spangler, Samodha C. Fernando

Department of Animal Science: Faculty Publications

Background: Infectious Bovine Keratoconjunctivitis (IBK), commonly known as pinkeye, is one of the most significant diseases of beef cattle. As such, IBK costs the US beef industry at least 150 million annually. However, strategies to prevent IBK are limited, with most cases resulting in treatment with antibiotics once the disease has developed. Longitudinal studies evaluating establishment of the ocular microbiota may identify critical risk periods for IBK outbreaks or changes in the microbiota that may predispose animals to IBK.

Results: In an attempt to characterize the establishment and colonization patterns of the bovine ocular microbiota, we conducted a longitudinal study …

Recharacterization Of Stenaspis Audinet-Serville, 1834 With A New Species From Mexico (Coleoptera: Cerambycidae: Cerambycinae: Trachyderini), Bryan K. Eya

Insecta Mundi

The genus Stenaspis Audinet-Serville, 1834 (Coleoptera: Cerambycidae: Cerambycinae: Trachy­derini) is recharacterized by providing additional morphological features to enhance the definition of this genus. Stenaspis plagiata Waterhouse, 1877 is transferred to Crioprosopus Audinet-Serville, 1834, new com­bination, and the latest key to species of Crioprosopus is modified. A key to the genera of Group III-Stenaspes with “abruptly separated anteocular space,” and a key to species of Stenaspis is provided. Color illustrations of the available species are included. Stenaspis lingafelteri Eya, new species, from Mexico is described.

Occurrence Status Of The Fall Armyworm (Lepidoptera: Noctuidae) In South Korea, Soo-Jung Suh, Deuk-Soo Choi, Sol-Moon Na

Insecta Mundi

To respond to the growing risk from Spodoptera frugiperda (J.E. Smith), the migratory fall ar­myworm (Lepidoptera: Noctuidae), the National Fall Armyworm Surveillance Program (NFASP) for early detection for this pest ran from April to November during 2019 and 2020. The fall armyworm surveillance program involved seasonal monitoring of the pest with pheromone traps placed in fields of cereal crops at high-risk locations. The trapping season ran from early spring to late autumn, with a total deployment of 396 traps. During the survey of 2019 to 2020, a total of 120 male adults of S. frugiperda were captured in these …

Zika Virus Infection Induces Endoplasmic Reticulum Stress And Apoptosis In Placental Trophoblasts, Philma Glora Muthuraj, Prakash K. Sahoo, Madison Kraus, Taylor Bruett, Arun S. Annamalai, Aryamav Pattnaik, Siddappa N. Byrareddy, Sathish Kumar Natarajan

Department of Nutrition and Health Sciences: Faculty Publications

Zika virus (ZIKV) infection to a pregnant woman can be vertically transmitted to the fetus via the placenta leading to Congenital Zika syndrome. This is characterized by microcephaly, retinal defects, and intrauterine growth retardation. ZIKV induces placental trophoblast apoptosis leading to severe abnormalities in the growth and development of the fetus. However, the molecular mechanism behind ZIKV-induced apoptosis in placental trophoblasts remains unclear. We hypothesize that ZIKV infection induces endoplasmic reticulum (ER) stress in the trophoblasts, and sustained ER stress results in apoptosis. HTR-8 (HTR-8/SVneo), a human normal immortalized trophoblast cell and human choriocarcinoma-derived cell lines (JEG-3 and JAR) were …

Beekeeping Practices And Challenges In The Kingdom Of Saudi Arabia: Adoption Of New Technologies And Selection Of Bee Species, Ella M. Poole

RURALS: Review of Undergraduate Research in Agricultural and Life Sciences

Apiculture (or beekeeping) is a highly profitable industry in Saudi Arabia. The Saudi national government has recognized the sector as having the potential to grow and improve the quality of life in rural areas. To expand the industry, Saudi government officials and academics are calling for beekeepers to switch from using traditional hives to moveable-frame box hives and from keeping indigenous bees to importing foreign bees. Although both changes have been shown to increase honey productivity, they are opposed by most Saudi beekeepers and increase the risk for the spread of dangerous bee diseases. This paper explores Saudi arguments for …

Malaria In Southern Venezuela: The Hottest Hotspot In Latin America, Maria Eugenia Grillet, Jorge E. Moreno, Juan V. Hernández-Villena, Maria F. Vincenti-González, Oscar Noya, Adriana Tami, Alberto Paniz-Mondolfi, Martin Llewellyn, Rachel Lowe, Ananias A. Escalante, Jan E. Conn

Harold W. Manter Laboratory of Parasitology: Library Materials

Malaria elimination in Latin America is becoming an elusive goal. Malaria cases reached a historical ~1 million in 2017 and 2018, with Venezuela contributing 53% and 51% of those cases, respectively. Historically, malaria incidence in southern Venezuela has accounted for most of the country’s total number of cases. The efficient deployment of disease prevention measures and prediction of disease spread to new regions requires an in-depth understanding of spatial heterogeneity on malaria transmission dynamics. Herein, we characterized the spatial epidemiology of malaria in southern Venezuela from 2007 through 2017 and described the extent to which malaria distribution has changed country-wide …

Intervention Of Climate‐Smart Practices In Wheat Under Rice‐ Wheat Cropping System In Nepal, Jamma Jaya Gairhe, Mandeep Adhikari, Deepak Ghimire, Arun Kjatri-Chhetri, Dinesh Panday

Department of Agronomy and Horticulture: Faculty Publications

Besides a proper agronomic management followed by Nepalese farmers, wheat (Triticum aestivum L.) production has been severely affected by changing climate. There are many interventions, including climate‐smart practices, to cope with this situation and possibly enhance crop and soil productivity. Field experiments were set up in a randomized complete block design with six treatments (TRT) with four replications in three locations (LOC) during wheat‐growing seasons in Nepal from 2014 to 2016. Treatments included (i) Controlled Practice (CP), (ii) Improved Low (IL), (iii) Improved High (IH), (iv) Climate Smart Agriculture Low (CSAL), (v) Climate Smart Agriculture Medium (CSAM), and (vi) Climate …

Longitudinal Assessment Of The Bovine Ocular Bacterial Community Dynamics In Calves, Alison Bartenslager, Nirosh D. Aluthge, John Dustin Loy

Department of Animal Science: Faculty Publications

Background: Infectious Bovine Keratoconjunctivitis (IBK), commonly known as pinkeye, is one of the most significant diseases of beef cattle. As such, IBK costs the US beef industry at least 150 million annually. However, strategies to prevent IBK are limited, with most cases resulting in treatment with antibiotics once the disease has developed. Longitudinal studies evaluating establishment of the ocular microbiota may identify critical risk periods for IBK outbreaks or changes in the microbiota that may predispose animals to IBK.

Results: In an attempt to characterize the establishment and colonization patterns of the bovine ocular microbiota, we conducted a longitudinal study …

Long Non-Coding Rna Meg3 Deficiency Impairs Glucose Homeostasis And Insulin Signaling By Inducing Cellular Senescence Of Hepatic Endothelium In Obesity, Xiao Cheng, Mohamed Sham Shihabudeen Haider Ali, Matthew Moran, Martonio Ponte Viana, Sarah L. Schlichte, Matthew C. Zimmerman, Oleh Khalimonchuk, Mark W. Feinberg, Xinghui Sun

Department of Biochemistry: Faculty Publications

Obesity-induced insulin resistance is a risk factor for diabetes and cardiovascular disease. However, the mechanisms underlying endothelial senescence in obesity, and how it impacts obesity-induced insulin resistance remain incompletely understood. In this study, transcriptome analysis revealed that the long non-coding RNA (lncRNA) Maternally expressed gene 3 (Meg3) is one of the top differentially expressed lncRNAs in the vascular endothelium in diet-induced obese mice. Meg3 knockdown induces cellular senescence of endothelial cells characterized by increased senescence-associated β–galactosidase activity, increased levels of endogenous superoxide, impaired mitochondrial structure and function, and impaired autophagy. Moreover, Meg3 knockdown causes cellular senescence of hepatic endothelium in …

Temperature But Not Ocean Acidification Affects Energy Metabolism And Enzyme Activities In The Blue Mussel, Mytilus Edulis, Omera B. Matoo, Gisela Lannig, Christian Bock, Inna M. Sokolova

School of Biological Sciences: Faculty Publications

1. In mosaic marine habitats, such as intertidal zones, ocean acidification (OA) is exacerbated by high variability of pH, temperature, and biological CO2 production. The nonlinear interactions among these drivers can be context-specific and their effect on organisms in these habitats remains largely unknown, warranting further investigation. 2. We were particularly interested in Mytilus edulis (the blue mussel) from intertidal zones of the Gulf of Maine (GOM), USA, for this study. GOM is a hot spot of global climate change (average sea surface temperature (SST) increasing by >0.2°C/year) with >60% decline in mussel population over the past 40 years. 3. …

Development Of Polymorphic Markers In The Immune Gene Complex Loci Of Cattle, K Bakshy, D Heimeier, J C. Schwartz, E J. Glass, S Wilkinson, R A. Skuce, A R. Allen, J Young, J C. Mcclure, J B. Cole, D J. Null, J A. Hammond, T P.L. Smith, D M. Bickhart

Roman L. Hruska U.S. Meat Animal Research Center: Reports

The addition of cattle health and immunity traits to genomic selection indices holds promise to increase individual animal longevity and productivity, and decrease economic losses from disease. However, highly variable genomic loci that contain multiple immune-related genes were poorly assembled in the first iterations of the cattle reference genome assembly and underrepresented during the development of most commercial genotyping platforms. As a consequence, there is a paucity of genetic markers within these loci that may track haplotypes related to disease susceptibility. By using hierarchical assembly of bacterial artificial chromosome inserts spanning 3 of these immune-related gene regions, we were able …

Itraq-Based Proteomic Analysis Of Bovine Pre-Ovulatory Plasma And Follicular Fluid, P A. Afedi, E L. Larimore, R A. Cushman, D Raynie, G A. Perry

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Bovine follicular fluid (FF) creates a unique microenvironment in follicles necessary for follicle growth, oocyte maturation, and estradiol (E2) production. The objective of this study was to analyze changes in proteins in FF and plasma (PL) from animals with high E2 (HE2) or low E2 (LE2) during the preovulatory period. Beef cows were synchronized, and follicular dynamics and ovulatory response were monitored using transrectal ultrasonography. Nine cows were selected and slaughtered, blood samples were collected at slaughter and FF was aspirated from dominant follicles (DF; >10 mm). Abundant proteins (albumin, IgG, IgA, and alpha-1-antitrypsin) were depleted from both PL and …

Production Of Tocotrienols In Seeds Of Cotton (Gossypium Hirsutum L.) Enhances Oxidative Stability And Offers Nutraceutical Potential, Shanmukh S. Salimath, Trevor B. Romsdahl, Anji Reddy Konda, Wei Zhang, Edgar B. Cahoon, Michael K. Dowd, Thomas C. Wedegaertner, Kater D. Hake, Kent D. Chapman

Center for Plant Science Innovation: Faculty Publications

Upland cotton (Gossypium hirsutum L.) is an economically important multi-purpose crop cultivated globally for fibre, seed oil and protein. Cottonseed oil also is naturally rich in vitamin E components (collectively known as tocochromanols), with a- and c-tocopherols comprising nearly all of the vitamin E components. By contrast, cottonseeds have little or no tocotrienols, tocochromanols with a wide range of health benefits. Here, we generated transgenic cotton lines expressing the barley (Hordeum vulgare) homogentisate geranylgeranyl transferase coding sequence under the control of the Brassica napus seed-specific promoter, napin. Transgenic cottonseeds had ~twofold to threefold increases in the accumulation of total vitamin …

Production Of Embryos And A Live Offspring Using Post Mortem Reproductive Material From Bison (Bison Bison Bison) Originating In Yellowstone National Park, Usa, Hayley M. Benham, Matthew P. Mccollum, Pauline Nol, Rebecca K. Frey, P. Ryan Clarke, Jack C. Rhyan, Jennifer P. Barfield

United States Department of Agriculture Wildlife Services: Staff Publications

Bison from Yellowstone National Park (YNP) have an important genetic history. As one of the few wild herds of bison with no evidence of cattle DNA introgression and a large enough population to maintain genetic diversity, they are considered a conservation priority for the species. Unfortunately, there is a high prevalence of the zoonotic disease brucellosis in the herd. Part of the management strategy for controlling the disease and herd size in YNP is to remove bison from the population during the winter migration out of the park. This interagency management cull provides an opportunity to collect a large number …

Utilizing An Electronic Feeder To Measure Individual Mineral Intake, Feeding Behavior, And Growth Performance Of Cow–Calf Pairs Grazing Native Range, Kacie L. Mccarthy, Michael Undi, Stephanie Becker, Carl R. Dahlen

Department of Animal Science: Faculty Publications

Crossbred Angus cow–calf pairs (n = 28 pairs) at the Central Grasslands Research Extension Center (Streeter, North Dakota) were used to evaluate an electronic feeder to monitor individual mineral intake and feeding behavior and their relationship with growth performance and liver mineral concentrations. Cows and calves were fitted with radio frequency identification ear tags that allowed access to an electronic feeder (SmartFeed system; C-Lock Inc., Rapid City, South Dakota) and were provided ad libitum minerals (Purina Wind and Rain Storm, Land O’Lakes, Inc., Arden Hills, MN). Mineral intake, number of visits, and duration at the feeder were recorded over …

Dispersal And Land Cover Contribute To Pseudorabies Virus Exposure In Invasive Wild Pigs, Felipe A. Hernandez, Amanda N. Carr, Michael P. Milleson, Hunter R. Merrill, Michael L. Avery, Brandon M. Parker, Cortney L. Pylant, James D. Austin, Samantha M. Wisely

United States Department of Agriculture Wildlife Services: Staff Publications

We investigated the landscape epidemiology of a globally distributed mammal, the wild pig (Sus scrofa), in Florida (U.S.), where it is considered an invasive species and reservoir to pathogens that impact the health of people, domestic animals, and wildlife. Specifically, we tested the hypothesis that two commonly cited factors in disease transmission, connectivity among populations and abundant resources, would increase the likelihood of exposure to both pseudorabies virus (PrV) and Brucella spp. (bacterial agent of brucellosis) in wild pigs across the Kissimmee Valley of Florida. Using DNA from 348 wild pigs and sera from 320 individuals at 24 sites, we …

Soil Health Management Enhances Microbial Nitrogen Cycling Capacity And Activity, Jianlin Hu, Virginia L. Jin, Julie Y.M. Konkel, Sean M. Schaeffer, Liesel G. Schneider, Jennifer M. Debruyn

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Soil microbial transformations of nitrogen (N) can be affected by soil health management practices. Here, we report in situ seasonal dynamics of the population size (gene copy abundances) and functional activity (transcript copy abundances) of five bacterial genes involved in soil N cycling (ammonia-oxidizing bacteria [AOB] amoA, nifH, nirK, nirS, and nosZ) in a long-term continuous cotton production system under different management practices (cover crops, tillage, and inorganic N fertilization). Hairy vetch (Vicia villosa Roth), a leguminous cover crop, most effectively promoted the expression of N cycle genes, which persisted after cover crop termination throughout the growing season. Moreover, we …

Tetra Disseminated Microsporidiosis: A Novel Disease In Ornamental Fish Caused By Fusasporis Stethaprioni N. Gen. N. Sp., J. Lovy, R. P. E. Yanong, J. M. Stilwell, T. B. Waltzek, J. P. Shelley, D. B. Pouder, J. C. Wolf, A. C. Camus

United States Department of Commerce: Staff Publications

A novel microsporidial disease was documented in two ornamental fish species, black tetra Gymnocorymbus ternetzi Boulenger 1895 and cardinal tetra Paracheirodon axelrodi Schultz 1956. The non-xenoma-forming microsporidium occurred diffusely in most internal organs and the gill, thus referring to the condition as tetra disseminated microsporidiosis (TDM). The occurrence of TDM in black tetra was associated with chronic mortality in a domestic farmed population, while the case in cardinal tetra occurred in moribund fish while in quarantine at a public aquarium. Histology showed that coelomic visceral organs were frequently necrotic and severely disrupted by extensive infiltrates of macrophages. Infected macrophages were …

Molecular-Assisted Breeding For Soybean With High Oleic/Low Linolenic Acid And Elevated Vitamin E In The Seed Oil, Katherine Hagely, Anji Reddy Konda, Jeong-Hwa Kim, Edgar B. Cahoon, Kristin Bilyeu

Center for Plant Science Innovation: Faculty Publications

The uses of vegetable oils are determined by functional properties arising from their chemical composition. Soybean oil was previously used in margarines and baked foods after partial hydrogenation to achieve heat and oxidative stability. This process, however, generates trans fats that are now excluded from food use because of cardiovascular health risks. Also present in soybean oil are the anti-oxidant tocopherols, with α- tocopherol (vitamin E) typically present as a minor component compared to γ-tocopherol. Genetic improvement of the fatty acid profile and tocopherol profile is an attractive solution to increase the functional and health qualities of soybean oil. The …

Case Report: Digital Restoration Of Fragmented Non-Human Skull, Gargi Jani, Abraham Johnson, William Belcher

Department of Anthropology: Faculty Publications

Reconstruction of fragmented material remains has been given a considerable attention in the fields of archaeology, forensic anthropology, and palaeoanthropology. Fragmented osseous remains are often found in cases of mass disasters, burning incidents, crash incidents, as well as bodily mutilation through criminal and suicidal activities. In cases where the remains are burnt or fragile, the handling of the remains becomes difficult and improper handling may lead to further destruction of the evidence. In such cases, digital restoration of the remains by means of threedimensional technology can be done as it is a non-invasive in nature and minimizes physical handling. It …

Valuation Of Drought Information: Understanding The Value Of The Us Drought Monitor In Land Management, Tingting Liu, Richard Krop, Tonya Haigh, Kelly Helm Smith, Mark D. Svoboda

National Drought Mitigation Center: Faculty Publications

Droughts affect recreation and tourism, grazing, forests, and timber, and can have important indirect effects for the ecosystems and species that rely on water. Despite its importance, the effect of drought in the land management sector is less understood than in other water-intensive sectors, such as agriculture and public water supplies. This study presents the first-ever estimates of the economic valuation of the information provided by the U.S. Drought Monitor using the avoided cost method. These estimates are based on the time and labor saved by using the U.S. Drought Monitor rather than compiling drought-related information from other sources, or …

Exploiting Common Senses: Sensory Ecology Meets Wildlife Conservation And Management, Laura K. Elmer, Christine L. Madliger, Daniel T. Blumstein, Chris K. Elvidge, Esteban Ernández-Juricic, Andrij Z. Horodysky, Nicholas S. Johnson, Liam P. Mcguire, Ronald R. Swaisgood, Steven J. Cooke

United States Geological Survey: Staff Publications

Multidisciplinary approaches to conservation and wildlife management are often effective in addressing complex, multi-factor problems. Emerging fields such as conservation physiology and conservation behaviour can provide innovative solutions and management strategies for target species and systems. Sensory ecology combines the study of ‘how animals acquire’ and process sensory stimuli from their environments, and the ecological and evolutionary significance of ‘how animals respond’ to this information. We review the benefits that sensory ecology can bring to wildlife conservation and management by discussing case studies across major taxa and sensory modalities. Conservation practices informed by a sensory ecology approach include the amelioration …

Alcohol-And-Hiv-Induced Lysosomal Dysfunction Regulates Extracellular Vesicles Secretion In Vitro And In Liver-Humanized Mice, Raghubendra Singh Dagur, Moses New-Aaron, Murali Ganesan, Weimin Wang, Svetlana Romanova, Srivatsan Kidambi, Kusum K. Kharbanda, Larisa Y. Poluektova, Natalia A. Osna

Department of Chemical and Biomolecular Engineering: Faculty Publications

Background: Alcohol abuse is common in people living with HIV-1 and dramatically enhances the severity of HIV-induced liver damage by inducing oxidative stress and lysosomal dysfunction in the liver cells. We hypothesize that the increased release of extracellular vesicles (EVs) in hepatocytes and liver humanized mouse model is linked to lysosome dysfunction. Methods: The study was performed on primary human hepatocytes and human hepatoma RLW_XP-GFP (Huh 7.5 cells stably transfected with CYP2E1 and XPack-GFP) cells and validated on ethanol-fed liver humanized fumarylacetoacetate hydrolase (Fah)^-/-, Rag2^-/-, common cytokine receptor gamma chain knockout (FRG-KO) mice. Cells and …

Genome-Wide Discovery Of Natural Variation In Pre-Mrna Splicing And Prioritising Causal Alternative Splicing To Salt Stress Response In Rice, Huihui Yu, Qian Du, Malachy Campbell, Bin Yu, Harkamal Walia, Chi Zhang

Department of Agronomy and Horticulture: Faculty Publications

Pre-mRNA splicing is an essential step for the regulation of gene expression. In order to specifically capture splicing variants in plants for genome-wide association studies (GWAS), we developed a software tool to quantify and visualise Variations of Splicing in Population (VASP). VASP can quantify splicing variants from short-read RNA-seq datasets and discover genotype-specific splicing (GSS) events, which can be used to prioritise causal pre-mRNA splicing events in GWAS. We applied our method to an RNA-seq dataset with 328 samples from 82 genotypes from a rice diversity panel exposed to optimal and saline growing conditions. In total, 764 significant GSS events …

Genome-Wide Discovery Of Natural Variation In Pre-Mrna Splicing And Prioritising Causal Alternative Splicing To Salt Stress Response In Rice, Huihui Yu, Qian Du, Malachy Campbell, Bin Yu, Harkamal Walia, Chi Zhang

School of Biological Sciences: Faculty Publications

• Pre-mRNA splicing is an essential step for the regulation of gene expression. In order to specifically capture splicing variants in plants for genome-wide association studies (GWAS), we developed a software tool to quantify and visualise Variations of Splicing in Population (VASP).
• VASP can quantify splicing variants from short-read RNA-seq datasets and discover genotype-specific splicing (GSS) events, which can be used to prioritise causal pre-mRNA splicing events in GWAS. We applied our method to an RNA-seq dataset with 328 samples from 82 genotypes from a rice diversity panel exposed to optimal and saline growing conditions.
• In total, 764 significant GSS events …

Complete Genome Sequence Of Geobacter Sp. Strain Feam09, A Moderately Acidophilic Soil Bacterium, Pooja Yadav, Sanjay Antony-Babu, Erin Hayes, Olivia M. Healy, Donald Pan, Wendy H. Yang, Whendee L. Silver, Christopher L. Anderson, Adam Voshall, Samodha C. Fernando, Etsuko N. Moriyama, Joshua R. Herr, Karrie A. Weber

School of Biological Sciences: Faculty Publications

A moderately acidophilic Geobacter sp. strain, FeAm09, was isolated from forest soil. The complete genome sequence is 4,099,068 bp with an average GC content of 61.1%. No plasmids were detected. The genome contains a total of 3,843 genes and 3,608 protein-coding genes, including genes supporting iron and nitrogen biogeochemical cycling.

An Environmental Assessment Of Cattle Manure And Urea Fertilizer Treatments For Corn Production In The Northern Great Plains, C. Alan Rotz, Senorpe Asem-Hiablie, Erin Cortus, Mindy J. Spiehs, Shafiqur Rahman, Anne Stoner

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Nitrogen (N), phosphorus (P), and carbon (C) emissions from livestock systems have become important regional, national, and international concerns. Our objective was to use process-level simulation to explore differences among manure and inorganic fertilizer treatments in a corn production system used to feed finishing cattle in the Northern Great Plains region of the U.S. Our analysis included model assessment, simulation to compare treatments under recent climate, and comparisons using projected midcentury climate. The Integrated Farm System Model was evaluated in representing the performance and nutrient losses of corn production using cattle manure without bedding, manure with bedding, urea, and no …

Use Of Bedding Materials In Beef Bedded Manure Packs In Hot And Cool Ambient Temperatures: Effects On Ammonia, Hydrogen Sulfide, And Greenhouse Gas Emissions, Jeff P. Jaderborg, Mindy J. Spiehs, Bryan L. Woodbury, Alfredo Dicostanzo, David B. Parker

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Throughout the Upper Midwest, producers have observed increased land and fertilizer prices, resulting in increased popularity of confinement feeding facilities such as mono-slope and hoop barns with bedded packs. Environmental and public pressure has been placed on the agriculture community to reduce ammonia (NH3), hydrogen sulfide (H2S), and greenhouse gas (GHG) emissions from concentrated animal feeding operations (CAFOs). This study was conducted to determine the effects of bedding material (corn stover (CS), bean stover (BS), wheat straw (WS), or pine wood chips (PC)) and ambient temperature (15°C (COOL) or 30°C (HOT)) on NH3, CH4, CO2, N2O, and H2S flux in …