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It's A Small World: Biogeography And Invasion In The Mouse Intestine, Ellen Lark

Graduate Student Theses, Dissertations, & Professional Papers

Host associated systems are of particular interest to many microbiologists because invasion of these systems can lead to disease. One important host-associated systems is the intestinal microbiome, but in many studies, including those on pathogenesis, this system is represented by samples from one location (generally the feces or cecum). This body of work was initiated in part because I wondered why a large and diverse ecosystem was being was being represented by samples from only one habitat.

The biogeography of living organisms has an impact on landscape ecology studies, including those in the field of invasion ecology. Despite several studies …

Bioe 370.01: General Ecology, Erick P. Greene

University of Montana Course Syllabi

No abstract provided.

Ensc 495.01: Field Study, Vicki J. Watson

University of Montana Course Syllabi

No abstract provided.

The Gps Craze: Six Questions To Address Before Deciding To Deploy Gps Technology On Wildlife, A. David M. Latham, M. Cecilia Latham, Dean P. Anderson, Jen Cruz, Dan Herries, Mark Hebblewhite

Wildlife Biology Faculty Publications

GPS and satellite technology for studies on wildlife have improved substantially over the past decade. It is now possible to collect fine-scale location data from migratory animals, animals that have previously been too small to deploy GPS devices on, and other difficult-to-study species. Often researchers and managers have formatted well-defined ecological or conservation questions prior to deploying GPS on animals, whereas other times it is arguably done simply because the technology is now available to do so. We review and discuss six important interrelated questions that should be addressed when planning a study requiring location data. Answers will clarify whether …

Can Fire Atlas Data Improve Species Distribution Model Projections?, Shawn M. Crimmins, Solomon Z. Dobrowski, Alison R. Mynsberge, Hugh D. Safford

Forest Management Faculty Publications

Correlative species distribution models (SDMs) are widely used in studies of climate change impacts, yet are often criticized for failing to incorporate disturbance processes that can influence species distributions. Here we use two temporally independent data sets of vascular plant distributions, climate data, and fire atlas data to examine the influence of disturbance history on SDM projection accuracy through time in the mountain ranges of California, USA. We used hierarchical partitioning to examine the influence of fire occurrence on the distribution of 144 vascular plant species and built a suite of SDMs to examine how the inclusion of fire-related predictors …

Causes Of Annual Reproductive Variation And Anthropogenic Disturbance In Harlequin Ducks Breeding In Glacier National Park, Montana, Warren Kevin Hansen

Graduate Student Theses, Dissertations, & Professional Papers

Annual reproductive variation is the central focus of many ecological studies. Variation in reproductive success is an important vital rate to study because it can lead to inferences about population health, extinction risk, human disturbance and habitat quality. The identification of the causes of reproductive variability can help guide conservation and management efforts of a species. In Glacier National Park, Montana I studied causes of annual reproductive variation and behavioral responses to human disturbance in a breeding population of harlequin ducks (Histrionicus histrionicus). Harlequins are rare sea ducks with a Holarctic distribution and winter along rocky coast lines of North …

Ecology And Engagement: The Importance Of Direct Experience Of Nature In Culture And Scholarship, Chris Baldwin Humm

Graduate Student Theses, Dissertations, & Professional Papers

Our culture is becoming increasingly detached from nature. We spend more of our time indoors than ever. While the indoors may offer certain benefits, it’s becoming increasingly clear that our alienation from nature has serious downsides. We depend upon nature for our physical, mental, and spiritual well-being and without it. The opposite of detachment is engagement. Engagement involves direct experience of nature, whether in national parks, wilderness, backyard woods, or unkempt vacant lots. If we want to reverse the problems associated with detachment, we need to encourage engaged alternatives. Only through a culture of engagement, one that recognizes and values …

Use Of Climatic Water Balance Metrics As Site Productivity Predictors, Matthew Dilsworth Perry

Graduate Student Theses, Dissertations, & Professional Papers

Estimates of long-term forest site productivity are required to inform multiple forest management objectives including growth and yield assessments, silvicultural planning, and biomass/carbon projections. Estimates traditionally have been quantified in the form of site index by measuring the average height-age relationships of dominant and codominant trees or using regional site index equations. Site index implementation requires that trees are free from suppression and that height growth results from the integration of the biological determinants of growth. While useful in even-aged stands, early age height growth suppression is common in uneven-aged forest structures making existing site indices difficult to assess. Additionally, …

Restoration As Caring Practice: A Relational Perspective On Ecological Recovery, Daniel Avery Congdon

Graduate Student Theses, Dissertations, & Professional Papers

Ecological restoration is defined by the Society for Ecological Restoration (SER) as “the process of assisting the recovery of an ecosystem that has been degraded, damaged or destroyed” (9). In practice, restoration typically involves the removal of pollution, human-made structures (like dams or roads), invasive species, and other impediments to ecological health. Removing the sources of ecological impairment is coupled with the reintroduction of flora, fauna, and the physical structures that are necessary for healthy ecosystem function. The potential for restoration to dominate nature is a concern of environmental ethicists. In theory, domination might stem from the technology used in …

Anty 400.01: History Of Anthropology, Richard A. Sattler

University of Montana Course Syllabi

No abstract provided.

Estimating Amur Tiger (Panthera Tigris Altaica) Kill Rates And Potential Consumption Rates Using Global Positioning System Collars, Clayton Steele Miller, Mark Hebblewhite, Yuri K. Petrunenko, Ivan V. Seryodkin, Nicholas J. Decesare, John M. Goodrich, Dale G. Miquelle

Wildlife Biology Faculty Publications

The International Union for Conservation of Nature has classified all subspecies of tigers (Panthera tigris) as endangered and prey depletion is recognized as a primary driver of declines. Prey depletion may be particularly important for Amur tigers (P. t. altaica) in the Russian Far East, living at the northern limits of their range and with the lowest prey densities of any tiger population. Unfortunately, rigorous investigations of annual prey requirements for any tiger population are lacking. We deployed global positioning system (GPS) collars on Amur tigers during 2009–2012 to study annual kill rates in the Russian …

Early Alzheimer's And Parkinson's Disease Pathology In Urban Children: Friend Versus Foe Responses—It Is Time To Face The Evidence, Lilian Calderón-Garcidueñas, Maricela Franco-Lira, Antonieta Mora-Tiscareño, Humberto Medina-Cortina, Ricardo Torres-Jardon, Michael Kavanaugh

Biomedical and Pharmaceutical Sciences Faculty Publications

Chronic exposure to particulate matter air pollution is known to cause inflammation leading to respiratory- and cardiovascularrelated sickness and death. Mexico City Metropolitan Area children exhibit an early brain imbalance in genes involved in oxidative stress, inflammation, and innate and adaptive immune responses. Early dysregulated neuroinflammation, brain microvascular damage, production of potent vasoconstrictors, and perturbations in the integrity of the neurovascular unit likely contribute to progressive neurodegenerative processes. The accumulation of misfolded proteins coincides with the anatomical distribution observed in the early stages of both Alzheimer's and Parkinson's diseases. We contend misfolding of hyperphosphorylated tau (HPrc), alpha-synuclein, and beta-amyloid could …

Care And Companionism: Animal Ethics At The End Of Life, Casie Jean Dunleavy

Graduate Student Theses, Dissertations, & Professional Papers

In this philosophical project, I discuss the different kinds of companion animal and human relations, or in other words, and provide an argument that specifies our ethical obligations to the animals we live with—-our ‘pets.’ In the first chapter, I suggest that there are three types of relationships that humans can have with animals. These are a relation of instrumentalism, paternalism, and companionism, respectively. Such relations rest along a spectrum, but I will argue that companionism is the ideal. After making and defending such conceptual distinctions between human-animal relations, the next chapter will tackle the problem of animal minds. Specifically, …

Evaluation Of A New Method For Large-Scale And Gene-Targeted Next Generation Dna Sequencing In Nonmodel Species, Ted Cosart

Graduate Student Theses, Dissertations, & Professional Papers

The efficient method called exon capture provides for sequencing genes genome-wide, targeting candidate genes, and sampling specific exons within genes. Although developed for model species with available whole genome sequences, the method can capture exons in nonmodel species using the genomic resources of a related model species. How close the relatives must be for effective exon capture is not known. The work herein demonstrates cross-taxa capture in ungulates, using the domestic cow genome as a reference. It also describes a computer program designed for collecting exon sequences for exon capture, allowing users to set per-gene and overall base pair (bp) …

The Importance Of Host Plant Limitation For Caterpillars Of An Arctiid Moth (Platyprepia Virginalis) Varies Spatially, Richard Karban, Patrick Grof-Tisza, John L. Maron, Marcel Holyoak

Biological Sciences Faculty Publications

Spatial dynamic theories such as source–sink models frequently describe habitat-specific demographies, yet there are surprisingly few field studies that have examined how and why interacting species vary in their dynamics across multiple habitat types. We studied the spatial pattern of interaction between a chewing herbivore and its primary larval host plant in two habitat types. We found that the interaction between an arctiid caterpillar (Platyprepia virginalis) and its host (Lupinus arboreus) differed in wet vs. upland dry habitats, as did yearly population dynamics for the caterpillar. In upland sites, there was a strong positive relationship between …

Asthma Randomized Trial Of Indoor Wood Smoke (Artis): Rationale And Methods, Curtis W. Noonan, Tony Ward

Public and Community Health Sciences Faculty Publications

Background—Particulate matter (PM) exposures have been linked with poor respiratory health outcomes, especially among susceptible populations such as asthmatic children. Smoke from biomass combustion for residential home heating is an important source of PM in many rural or peri-urban areas in the United States.

Aim—To assess the efficacy of residential interventions that reduce indoor PM exposure from wood stoves and to quantify the corresponding improvements in quality of life and health outcomes for asthmatic children.

Design—The Asthma Randomized Trial of Indoor wood Smoke (ARTIS) study is an in-home intervention study of susceptible children exposed to biomass combustion …

Mapping A Historic Bitterroot Valley, Montana Landscape Using General Land Office Surveyors' Field Notes, Karen M. Shelly

Graduate Student Theses, Dissertations, & Professional Papers

The late 1800s Bitterroot Valley, Montana, landscape and settlement patterns were summarized and mapped using the General Land Office (GLO) surveyors' field notes. Surveyors' observations of six townships from Hamilton to the Stevensville vicinity were examined in several ways. A total of 3321 points of ecological and geographic information and 422 miles of vegetation were mapped from the field notes. Surveyor information, vegetation composition, tree abundance, vegetation spatial structure and distribution of vegetation types were characterized in a multi-part historic vegetation data assemblage of point, line and polygon feature classes. Aquatic, topographic and cultural aspects of the area contributed to …

Evaluation Of Merra Land Surface Estimates In Preparation For The Soil Moisture Active Passive Mission, Yonghong Yi, John S. Kimball, Lucas A. Jones, Rolf H. Reichle, Kyle C. Mcdonald

Numerical Terradynamic Simulation Group Publications

The authors evaluated several land surface variables from the Modern-Era Retrospective Analysis for Research and Applications (MERRA) product that are important for global ecological and hydrological studies, including daily maximum (T_max) and minimum (T_min) surface air temperatures, atmosphere vapor pressure deficit (VPD), incident solar radiation (SW_rad), and surface soil moisture. The MERRA results were evaluated against in situ measurements, similar global products derived from satellite microwave [the Advanced Microwave Scanning Radiometer for Earth Observing System (EOS) (AMSR-E)] remote sensing and earlier generation atmospheric analysis [Goddard Earth Observing System version 4 (GEOS-4)] products. …

The Forgotten Stage Of Forest Succession: Early-Successional Ecosystems On Forest Sites, Mark E. Swanson, Jerry F. Franklin, Robert L. Beschta, Charles M. Crisafulli, Dominick A. Dellasala, Richard L. Hutto, David B. Lindenmaver, Frederick J. Swanson

Biological Sciences Faculty Publications

Early-successional forest ecosystems that develop after stand-replacing or partial disturbances are diverse in species, processes, and structure. Post-disturbance ecosystems are also often rich in biological legacies, including surviving organisms and organically derived structures, such as woody debris. These legacies and post-disturbance plant communities provide resources that attract and sustain high species diversity, including numerous early-successional obligates, such as certain woodpeckers and arthropods. Early succession is the only period when tree canopies do not dominate the forest site, and so this stage can be characterized by high productivity of plant species (including herbs and shrubs), complex food webs, large nutrient fluxes, …

An Ecosystem-Scale Model For The Spread Of A Host-Specific Forest Pathogen In The Greater Yellowstone Ecosystem, Jaclyn A. Hatala, Michael C. Dietze, Robert L. Crabtree, Katherine Kendall, Diana Six, Paul R. Moorcroft

Ecosystem and Conservation Sciences Faculty Publications

The introduction of nonnative pathogens is altering the scale, magnitude, and persistence of forest disturbance regimes in the western United States. In the high-altitude whitebark pine (Pinus albicaulis) forests of the Greater Yellowstone Ecosystem (GYE), white pine blister rust (Cronartium ribicola) is an introduced fungal pathogen that is now the principal cause of tree mortality in many locations. Although blister rust eradication has failed in the past, there is nonetheless substantial interest in monitoring the disease and its rate of progression in order to predict the future impact of forest disturbances within this critical ecosystem.

This …

Multiscale Effects Of Forest Roads On Black Bears (Ursus Americanus), Benjamin S. Jimenez

Graduate Student Theses, Dissertations, & Professional Papers

As the vast network of roads continues to expand across the continent, so too does the necessity to understand the associated ecological effects. To appropriately assess the impacts of these roads on wildlife it is necessary to evaluate how they affect ecological processes at multiple spatial and temporal scales. In particular, where hunting is associated with road access, roads may induce heightened behavioral responses. I assessed the effects of forest roads on habitat selection and activity patterns of a population of black bears (Ursus americanus) in the Coeur d’Alene Mountains of northern Idaho, USA. This black bear population is exposed …

Experimental Litterfall Manipulation Effects On Soil Bacterial Community Structure And Soil Carbon Cycling In A Wet Tropical Forest, Jonathan Winston Leff

Graduate Student Theses, Dissertations, & Professional Papers

Global changes such as increasing atmospheric carbon dioxide (CO2) concentrations or climate change are likely to drive shifts in plant-derived carbon (C) inputs to terrestrial ecosystems via changes in litterfall and plant net primary production (NPP). However, the effects of shifting detrital C inputs on belowground microbial community function, C cycling and fluxes remain largely unknown, especially in tropical forest ecosystems. To investigate how shifts in bacterial community composition resulting from differences in C availability affect organic matter decomposition and how soil C pools and fluxes respond to shifts in C inputs, I utilized an in situ litter manipulation experiment …

Fifty Years On The Fringe: Murray Bookchin And The American Revolutionary Tradition, 1921-1971, Aaron David Hyams

Graduate Student Theses, Dissertations, & Professional Papers

Hyams, Aaron, M.A., Spring 2011 History Fifty Years on the Fringe: Murray Bookchin and the American Revolutionary Tradition 1921-1971 Chairperson: Dr. Michael Mayer Murray Bookchin was an American revolutionary and political theorist born in New York City in 1921. His career as both an activist and a theorist through the thirties, forties, fifties and sixties, made him an active participant and influential voice for both the American Old Left, and the New Left. Writing for Contemporary Issues, a left wing journal edited by Josef Weber, Bookchin became an important part of the schismatic Left, a loose conglomeration of Marxist and …

Puma Dispersal Ecology In The Central Rocky Mountains, Jesse R. Newby

Graduate Student Theses, Dissertations, & Professional Papers

The structuring of populations within a metapopulation, connected through dispersal, is important to basic and applied ecology. However, a considerable gap exists in our knowledge of the influence landscape heterogeneity has on dispersal and its consequences. We examined landscape effects on dispersal and its consequences for puma (Puma concolor) populations using data from three separate populations in the Central Rocky Mountains including the Northern Greater Yellowstone Ecosystem (NGYE), the Southern Greater Yellowstone Ecosystem (SGYE) and the Garnet Mountains of Montana. We found human-induced mortality reduced inter-population vital rates with population consequences. The NGYE population was dependent largely on immigration for …

Distinguishing Technology From Biology: A Critical Review Of The Use Of Gps Telemetry Data In Ecology, Mark Hebblewhite, Daniel T. Haydon

Biological Sciences Faculty Publications

In the past decade, ecologists have witnessed vast improvements in our ability to collect animal movement data through animal-borne technology, such as through GPS or ARGOS systems. However, more data does not necessarily yield greater knowledge in understanding animal ecology and conservation. In this paper, we provide a review of the major benefits, problems and potential misuses of GPS/Argos technology to animal ecology and conservation. Benefits are obvious, and include the ability to collect fine-scale spatio-temporal location data on many previously impossible to study animals, such as ocean-going fish, migratory songbirds and long-distance migratory mammals. These benefits come with significant …

Correlation And Studies Of Habitat Selection: Problem, Red Herring Or Opportunity?, John Fieberg, Jason Matthiopoulos, Mark Hebblewhite, Mark S. Boyce, Jacqueline L. Frair

Biological Sciences Faculty Publications

With the advent of new technologies, animal locations are being collected at ever finer spatio-temporal scales. We review analytical methods for dealing with correlated data in the context of resource selection, including post hoc variance inflation techniques, ‘two-stage’ approaches based on models fit to each individual, generalized estimating equations and hierarchical mixed-effects models. These methods are applicable to a wide range of correlated data problems, but can be difficult to apply and remain especially challenging for use–availability sampling designs because the correlation structure for combinations of used and available points are not likely to follow common parametric forms. We also …

Linking Environmental Nutrient Enrichment And Disease Emergence In Humans And Wildlife, Pieter T. J. Johnson, Alan R. Townsend, Cory C. Cleveland, Patricia M. Glibert, Robert W. Howarth, Valerie J. Mckenzie, Eliska Rejmankova, Mary H. Ward

Ecosystem and Conservation Sciences Faculty Publications

Worldwide increases in human and wildlife diseases have challenged ecologists to understand how large-scale environmental changes affect host–parasite interactions. One of the most profound changes to Earth's ecosystems is the alteration of global nutrient cycles, including those of phosphorus (P) and especially nitrogen (N). Along with the obvious direct benefits of nutrient application for food production, anthropogenic inputs of N and P can indirectly affect the abundance of infectious and noninfectious pathogens. The mechanisms underpinning observed correlations, however, and how such patterns vary with disease type, have long remained conjectural. Here, we highlight recent experimental advances to critically evaluate the …

Are Forested Buffers An Effective Conservation Strategy For Riparian Fauna? An Assessment Using Meta-Analysis, Laurie B. Marczak, Takashi Sakamaki, Shannon L. Turvey, Isabelle Deguise, Sylvia L. R. Wood, John S. Richardson

Biological Sciences Faculty Publications

Historically, forested riparian buffers have been created to provide protection for aquatic organisms and aquatic ecosystem functions. Increasingly, new and existing riparian buffers are being used also to meet terrestrial conservation requirements. To test the effectiveness of riparian buffers for conserving terrestrial fauna, we conducted a meta-analysis using published data from 397 comparisons of species abundance in riparian buffers and unharvested (reference) riparian sites. The response of terrestrial species to riparian buffers was not consistent between taxonomic groups; bird and arthropod abundances were significantly greater in buffers relative to unharvested areas, whereas amphibian abundance decreased. Edge-preferring species were more abundant …

August Stream Discharge Trends Portend Impacts Of Climate Change In The Northern Rockies, Jason Christopher Leppi

Graduate Student Theses, Dissertations, & Professional Papers

This thesis is composed of two potential professional papers written to be independent of each other. Both papers were written to explore changes in late summer discharge patterns across the Northern Rockies (NR). Water in the interior western United States is a vital resource and the demand for this resource has increased. Watersheds in the NR are mainly snowmelt dominated in that they depend on the seasonal flux of snow-melt during dry periods. During the summer months August is a critical time for aquatic ecosystems due to typical low discharge and warm air temperatures. During this period water temperatures can …

Biological Control: Effects Of Tyria Jacobaeae On The Population Dynamics Of Senecio Jacobaea In Northwest Montana, Kimberly Kay Crider

Graduate Student Theses, Dissertations, & Professional Papers

Biological control, using introduced, specialist insects is a common strategy for controlling plant invasions. However, the efficacy of biological control agents in controlling their host plants is rarely quantified population level. I quantified the impact of a specialist biological control agent, the cinnabar moth (Tyria jacobaeae) on its host plant, tansy ragwort (Senecio jacobaea) in northwest Montana. Cinnabar moth damage and its effects on important plant vital rates were tested with and without specialist herbivores. The presence of moth larvae corresponded to a reduction in population growth rates to less than one, compared to herbivore-free controls, indicating the potential for …