Digital Commons Network^™

Oswald Social Sciences Second Place: Do Pigeons Develop Mental Representations When Demonstrating Transitive Inference?, Carter Daniels

Kaleidoscope

Transitive Inference (TI) is shown when after being told that A is better than B and B is better than C, one can answer the question, what is better A or C (in which A, B, and C are arbitrary stimuli). To avoid end-point effects (A is always better and C is never better) and provide a nonverbal task than can be used with young children and animals, the task has been expanded to 5 terms (i.e., A+B-, B+C-, C+D-, D+E- in which + means choice is reinforced and – means not reinforced). TI is found when subjects choose B …

Oswald Biological Sciences First Place: Development Of Three-Dimensional Lung Multicellular Spheroids In Air And Liquid Interface Culture For The Evaluation Of Anti-Cancer Therapeutics, Alexandra Tsoras

Kaleidoscope

The implementation of in vitro results to in vivo applications has limitations due to conventional two-dimensional (2D) in vitro conditions lacking the ability to create a physiologically representative model. This study investigated a three-dimensional (3D) cell culture technique to model lung tumors in vitro. A 3D lung cancer model was created by applying collagen (a semi-non-adhesive material) to a transwell, which allowed for nutrient transfer through the collagen. Two lung cancer cells lines (H358, a bronchioalveolar carcinoma and A549, a lung adenocarcinoma) were seeded on top of the collagen. The non-adhesive collagen allowed the cells to preferentially attach to one …

Oswald Biological Sciences Second Place: Rna Degradation Is Elevated With Age-, But Not Disuse-Associated Skeletal Muscle Atrophy, Aman Shah

Kaleidoscope

Aging and inactivity are both associated with decreased muscle size and protein content. The possible role of RNA degradation in the loss of protein has not yet been investigated. Therefore, we hypothesized that RNA degradation was elevated with muscle atrophy in aging and disuse. Brown Norway/Fisher344 male rats at 6 and 32 months were hindlimb suspended (HS) for 14 days to induce muscle atrophy or remained weight bearing (WB). Cytosolic extracts from gastrocnemius muscles were prepared for Western analysis of DCP-2 protein (marker of p-bodies) and RNA degradation assay. In vitro total RNA decay assay was performed using 30ug of …

Global Kentucky (Summer 2014), University Of Kentucky International Center

Global Kentucky

No abstract provided.

Redox Proteomic Identification Of Hne-Bound Mitochondrial Proteins In Cardiac Tissues Reveals A Systemic Effect On Energy Metabolism After Doxorubicin Treatment, Y. Zhao, Sumitra Miriyala, L. Miao, Mihail I. Mitov, David M. Schnell, Sanjit Kumar Dhar, J. Cai, J. B. Klein, Rukhsana Sultana, D. Allan Butterfield, Mary Vore, I. Batinic-Haberle, Subbarao Bondada, Daret K. St. Clair

Toxicology and Cancer Biology Faculty Publications

Doxorubicin (DOX), one of the most effective anticancer drugs, is known to generate progressive cardiac damage, which is due, in part, to DOX-induced reactive oxygen species (ROS). The elevated ROS often induce oxidative protein modifications that result in alteration of protein functions. This study demonstrates that the level of proteins adducted by 4-hydroxy-2-nonenal (HNE), a lipid peroxidation product, is significantly increased in mouse heart mitochondria after DOX treatment. A redox proteomics method involving two-dimensional electrophoresis followed by mass spectrometry and investigation of protein databases identified several HNE-modified mitochondrial proteins, which were verified by HNE-specific immunoprecipitation in cardiac mitochondria from the …

Stress And Decline In Woody Plants, Nicole Ward Gauthier, Cheryl A. Kaiser, Jamie Dockery, Delia Scott, Kristin Goodin, Jeremy Williams

Agriculture and Natural Resources Publications

Woody plant stress has many causes that might ultimately lead to plant decline. Tree and shrub degeneration is often referred to as a “complex,” meaning the condition is usually caused by multiple factors. Typically, one or more primary stresses cause deterioration of plant health, followed by secondary pathogens and/or insects that further decline or destroy plants. Determining causes of decline requires careful examination of plants and growing sites, as well as knowledge of site history. Nevertheless, diagnoses may be difficult, as the original cause(s) of plant stress may be obscure or no longer present.

Streambank Erosion, Matthew C. Burnette, Carmen T. Agouridis

Agriculture and Natural Resources Publications

Streambank erosion refers to the removal of soil and other material, such as rock and vegetation, from the streambank (Figure 1). Streambank erosion is a naturally occurring process, but the rate at which it occurs is often increased by anthropogenic or human activities such as urbanization and agriculture. Changes in land use can cause streambanks to erode at rates much faster than those seen in natural, undisturbed systems.

Fescue Toxicosis, Michelle Arnold, Cynthia Gaskill, S. Ray Smith

Agriculture and Natural Resources Publications

Tall fescue [Lolium arundinaceum (Schreb.) Darbysh.] is a cool-season, perennial grass frequently infected with the fungal endophyte Neotyphodium coenophialum. An endophyte is a fungus or bacteria that lives entirely within the tissue spaces of plants and is only visible microscopically. The plant and fungus enjoy a relationship that is symbiotic—mutually beneficial to both organisms. The fungus has free access to the plant’s nutrients and the plant provides a means for the endophyte to reproduce through infected seeds. The fungus, in turn, produces chemicals (ergot alkaloids) that function as chemical defenses, making the plant more vigorous, pest-resistant, drought-resistant, and …

Considering The Environment In The Maintenance Of Your Kentucky Lawn: A Season By Season Approach, Gregg Munshaw, Paul C. Vincelli

Agriculture and Natural Resources Publications

“Going Green” is a buzz phrase that is heard a lot these days. Everything from driving hybrid cars to recycling plastics can be considered going green. But can we go green when it comes to maintaining our lawns? The answer to that question is not all that simple. Most people do not realize the environmental benefits of lawns. Lawns are known to cool the air, reduce soil erosion, remove dust and pollutants (including CO₂) from the air, reduce run-off of water and pollutants, create oxygen for humans, and improve soils over time by supplying organic matter. Lawns are …

How Dry Seasons Affect Woody Plants, Nicole Ward Gauthier, Susan Fox, Kathy Wimberley

Agriculture and Natural Resources Publications

Pattern, frequency, and amounts of rainfall are important components to plant health. Water is an essential plant component, making up 70 percent to 90 percent of plant mass. Growth, photosynthesis (manufacture of food), nutrient transport, important chemical reactions, and the production of secondary metabolites are all dependent upon water uptake from roots. Water expands and enlarges new cells within stems and leaves, which holds them upright (turgor pressure).

During dry seasons and drought conditions, plants become stressed (Figure 1). Growth ceases, nutrient transport slows, and plants wilt as cells become water-deficient. Severe, long-term, or consecutive drought events may cause permanent …

Tissue Triage And Freezing For Models Of Skeletal Muscle Disease, Hui Meng, Paul M. L. Janssen, Robert W. Grange, Lin Yang, Alan H. Beggs, Lindsay C. Swanson, Stacy A. Cossette, Alison Frase, Martin K. Childers, Henk Granzier, Emanuela Gussoni, Michael W. Lawlor

Biostatistics Faculty Publications

Skeletal muscle is a unique tissue because of its structure and function, which requires specific protocols for tissue collection to obtain optimal results from functional, cellular, molecular, and pathological evaluations. Due to the subtlety of some pathological abnormalities seen in congenital muscle disorders and the potential for fixation to interfere with the recognition of these features, pathological evaluation of frozen muscle is preferable to fixed muscle when evaluating skeletal muscle for congenital muscle disease. Additionally, the potential to produce severe freezing artifacts in muscle requires specific precautions when freezing skeletal muscle for histological examination that are not commonly used when …

Vcam-1/Α4Β1 Integrin Interaction Is Crucial For Prompt Recruitment Of Immune T Cells Into The Brain During The Early Stage Of Reactivation Of Chronic Infection With Toxoplasma Gondii To Prevent Toxoplasmic Encephalitis, Qila Sa, Eri Ochiai, Tomoko Sengoku, Melinda E. Wilson, Morgan Brogli, Stephen Crutcher, Sara A. Michie, Baohui Xu, Laura Payne, Xisheng Wang, Yasuhiro Suzuki

Microbiology, Immunology, and Molecular Genetics Faculty Publications

Reactivation of chronic infection with Toxoplasma gondii can cause life-threatening toxoplasmic encephalitis in immunocompromised individuals. We examined the role of VCAM-1/α4β1 integrin interaction in T cell recruitment to prevent reactivation of the infection in the brain. SCID mice were infected and treated with sulfadiazine to establish a chronic infection. VCAM-1 and ICAM-1 were the endothelial adhesion molecules detected on cerebral vessels of the infected SCID and wild-type animals. Immune T cells from infected wild-type mice were treated with anti-α4 integrin or control antibodies and transferred into infected SCID or nude mice, and the animals received the same antibody every other …

Phosphoinositides: Minor Lipids Make A Major Impact On Photoreceptor Cell Functions, Raju V. S. Rajala, Ammaji Rajala, Andrew J. Morris, Robert E. Anderson

Internal Medicine Faculty Publications

Activation of the phosphoinositide (PI) cycle generates the second messengers that control various aspects of cellular signaling. We have previously shown that two PI cycle enzymes, type II phosphatidylinositol 5-phosphate 4-kinase (PIPK IIα) and phosphoinositide 3-kinase (PI3K), are activated through light stimulation. In our earlier studies, we measured enzyme activities, instead of directly measuring the products, due to lack of sensitive analytical techniques. Cells have very low levels of PIs, compared to other lipids, so special techniques and sensitive analytical instruments are necessary for their identification and quantification. There are also other considerations, such as different responses in different cell …

Il-4 Signaling Drives A Unique Arginase+/Il-1Β+ Microglia Phenotype And Recruits Macrophages To The Inflammatory Cns: Consequences Of Age-Related Deficits In Il-4rα After Traumatic Spinal Cord Injury, Ashley M. Fenn, Jodie C.E. Hall, John C. Gensel, Phillip G. Popovich, Jonathan P. Godbout

Spinal Cord and Brain Injury Research Center Faculty Publications

Alternative activation of microglia/macrophages (M2a) by interleukin (IL)-4 is purported to support intrinsic growth and repair processes after CNS injury. Nonetheless, alternative activation of microglia is poorly understood in vivo, particularly in the context of inflammation, injury, and aging. Here, we show that aged mice (18-19 months) had reduced functional recovery after spinal cord injury (SCI) associated with impaired induction of IL-4 receptor α (IL-4Rα) on microglia. The failure to successfully promote an IL-4/IL-4Rα response in aged mice resulted in attenuated arginase (M2a associated), IL-1β, and chemokine ligand 2 (CCL2) expression, and diminished recruitment of IL-4Rα⁺ macrophages to …

Animal Arterivirus Infections, Denis Archambault, Udeni B. R. Balasuriya, Raymond R. R. Rowland, Hanchun Yang, Dongwan Yoo

Veterinary Science Faculty Publications

No abstract.

Targeting The Wnt/Β-Catenin Signaling Pathway In Liver Cancer Stem Cells And Hepatocellular Carcinoma Cell Lines With Fh535, Roberto Gedaly, Roberto Galuppo, Michael F. Daily, Malay B. Shah, Erin Colleen Maynard, Changguo Chen, Xiping Zhang, Karyn A. Esser, Donald A. Cohen, B. Mark Evers, Jieyun Jiang, Brett T. Spear

Surgery Faculty Publications

Activation of the Wnt/β-catenin pathway has been observed in at least 1/3 of hepatocellular carcinomas (HCC), and a significant number of these have mutations in the β-catenin gene. Therefore, effective inhibition of this pathway could provide a novel method to treat HCC. The purposed of this study was to determine whether FH535, which was previously shown to block the β-catenin pathway, could inhibit β-catenin activation of target genes and inhibit proliferation of Liver Cancer Stem Cells (LCSC) and HCC cell lines. Using β-catenin responsive reporter genes, our data indicates that FH535 can inhibit target gene activation by endogenous and exogenously …

Alternative Splicing In Plant Immunity, Shengming Yang, Fang Tang, Hongyan Zhu

Plant and Soil Sciences Faculty Publications

Alternative splicing (AS) occurs widely in plants and can provide the main source of transcriptome and proteome diversity in an organism. AS functions in a range of physiological processes, including plant disease resistance, but its biological roles and functional mechanisms remain poorly understood. Many plant disease resistance (R) genes undergo AS, and several R genes require alternatively spliced transcripts to produce R proteins that can specifically recognize pathogen invasion. In the finely-tuned process of R protein activation, the truncated isoforms generated by AS may participate in plant disease resistance either by suppressing the negative regulation of initiation of …

Obesity And Diabetes Cause Cognitive Dysfunction In The Absence Of Accelerated Β-Amyloid Deposition In A Novel Murine Model Of Mixed Or Vascular Dementia, Dana M. Niedowicz, Valerie L. Reeves, Thomas L. Platt, Katharina Kohler, Tina L. Beckett, David K. Powell, Tiffany L. Lee, Travis R. Sexton, Eun Suk Song, Lawrence D. Brewer, Caitlin S. Latimer, Susan D. Kraner, Kara L. Larson, Sabire Özcan, Christopher M. Norris, Louis B. Hersh, Nada M. Porter, Donna M. Wilcock, Michael Paul Murphy

Sanders-Brown Center on Aging Faculty Publications

Mid-life obesity and type 2 diabetes mellitus (T2DM) confer a modest, increased risk for Alzheimer's disease (AD), though the underlying mechanisms are unknown. We have created a novel mouse model that recapitulates features of T2DM and AD by crossing morbidly obese and diabetic db/db mice with APP^ΔNL/ΔNLx PS1^P264L/P264L knock-in mice. These mice (db/AD) retain many features of the parental lines (e.g. extreme obesity, diabetes, and parenchymal deposition of β-amyloid (Aβ)). The combination of the two diseases led to additional pathologies-perhaps most striking of which was the presence of severe cerebrovascular pathology, including aneurysms and small …

An Overview Of The Gene Regulatory Network Controlling Trichome Development In The Model Plant, Arabidopsis, Sitakanta Pattanaik, Barunava Patra, Sanjay Kumar Singh, Ling Yuan

Kentucky Tobacco Research and Development Center Faculty Publications

Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simple unicellular trichomes of Arabidopsis serve as an excellent model to study molecular mechanism of cell differentiation and pattern formation in plants. The emerging picture suggests that the developmental process is controlled by a transcriptional network involving three major groups of transcription factors (TFs): the R2R3 MYB, basic helix-loop-helix (bHLH), and WD40 repeat (WDR) protein. …

Acute Sterol O-Acyltransferase 2 (Soat2) Knockdown Rapidly Mobilizes Hepatic Cholesterol For Fecal Excretion, Stephanie M. Marshall, Anthony D Gromovsky, Kathryn L. Kelley, Matthew A. Davis, Martha D. Wilson, Richard G. Lee, Rosanne M. Crooke, Mark J. Graham, Lawrence L. Rudel, J. Mark Brown, Ryan E. Temel

Saha Cardiovascular Research Center Faculty Publications

The primary risk factor for atherosclerotic cardiovascular disease is LDL cholesterol, which can be reduced by increasing cholesterol excretion from the body. Fecal cholesterol excretion can be driven by a hepatobiliary as well as a non-biliary pathway known as transintestinal cholesterol efflux (TICE). We previously showed that chronic knockdown of the hepatic cholesterol esterifying enzyme sterol O-acyltransferase 2 (SOAT2) increased fecal cholesterol loss via TICE. To elucidate the initial events that stimulate TICE, C57Bl/6 mice were fed a high cholesterol diet to induce hepatic cholesterol accumulation and were then treated for 1 or 2 weeks with an antisense oligonucleotide targeting …

Forage News [2014-06], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• KFGC Field Day
• KFGC Award Nominations
• Beef Bash - Hold the Date
• U.K. Forage Workers Tour
• Kentucky Grazing School
• Impact of Forage Species (Quality) on Stocker Average Daily Gains
• Southern Forages: An Information Transfer "Success Story"
• Native Grass Perceptions: Producer and Professionals Surveys in Tennessee
• Economics of Native Grass Forage Production: How We Got Lucky and Where to from Here?
• Tolerance of Four Clover Species to Varying Rates of Pre and Post-Emergent Broadleaf Pasture Herbicides

Resveratrol And Cancer: Focus On In Vivo Evidence, Lindsay G. Carter, John A. D'Orazio, Kevin J. Pearson

Graduate Center for Nutritional Sciences Faculty Publications

Resveratrol is a naturally occurring polyphenol that provides a number of anti-aging health benefits including improved metabolism, cardioprotection, and cancer prevention. Much of the work on resveratrol and cancer comes from in vitro studies looking at resveratrol actions on cancer cells and pathways. There are, however, comparatively fewer studies that have investigated resveratrol treatment and cancer outcomes in vivo, perhaps limited by its poor bioavailability when taken orally. Although research in cell culture has shown promising and positive effects of resveratrol, evidence from rodents and humans is inconsistent. This review highlights the in vivo effects of resveratrol treatment on breast, …

Finding Of Widespread Viral And Bacterial Revolution Dsdna Translocation Motors Distinct From Rotation Motors By Channel Chirality And Size, Gian Marco De-Donatis, Zhengyi Zhao, Shaoying Wang, Lisa P. Huang, Chad T. Schwartz, Oleg V. Tsodikov, Hui Zhang, Farzin Haque, Peixuan Guo

Nanobiotechnology Center Faculty Publications

BACKGROUND: Double-stranded DNA translocation is ubiquitous in living systems. Cell mitosis, bacterial binary fission, DNA replication or repair, homologous recombination, Holliday junction resolution, viral genome packaging and cell entry all involve biomotor-driven dsDNA translocation. Previously, biomotors have been primarily classified into linear and rotational motors. We recently discovered a third class of dsDNA translocation motors in Phi29 utilizing revolution mechanism without rotation. Analogically, the Earth rotates around its own axis every 24 hours, but revolves around the Sun every 365 days.

RESULTS: Single-channel DNA translocation conductance assay combined with structure inspections of motor channels on bacteriophages P22, SPP1, HK97, T7, …

Probability Of Regenerating A Normal Limb After Bite Injury In The Mexican Axolotl (Ambystoma Mexicanum), Sierra Thompson, Laura Muzinic, Christopher Muzinic, Matthew L. Niemiller, S. Randal Voss

Biology Faculty Publications

Multiple factors are thought to cause limb abnormalities in amphibian populations by altering processes of limb development and regeneration. We examined adult and juvenile axolotls (Ambystoma mexicanum) in the Ambystoma Genetic Stock Center (AGSC) for limb and digit abnormalities to investigate the probability of normal regeneration after bite injury. We observed that 80% of larval salamanders show evidence of bite injury at the time of transition from group housing to solitary housing. Among 717 adult axolotls that were surveyed, which included solitary-housed males and group-housed females, approximately half presented abnormalities, including examples of extra or missing digits and …

Secretory Iga Is Concentrated In The Outer Layer Of Colonic Mucus Along With Gut Bacteria, Eric W. Rogier, Aubrey L. Frantz, Maria E. C. Bruno, Charlotte S. Kaetzel

Microbiology, Immunology, and Molecular Genetics Faculty Publications

Antibodies of the secretory IgA (SIgA) class comprise the first line of antigen-specific immune defense, preventing access of commensal and pathogenic microorganisms and their secreted products into the body proper. In addition to preventing infection, SIgA shapes the composition of the gut microbiome. SIgA is transported across intestinal epithelial cells into gut secretions by the polymeric immunoglobulin receptor (pIgR). The epithelial surface is protected by a thick network of mucus, which is composed of a dense, sterile inner layer and a loose outer layer that is colonized by commensal bacteria. Immunofluorescence microscopy of mouse and human colon tissues demonstrated that …

Self-Reported Head Injury And Risk Of Late-Life Impairment And Ad Pathology In An Ad Center Cohort, Erin L. Abner, Peter T. Nelson, Frederick A. Schmitt, Steven R. Browning, David W. Fardo, Lijie Wan, Gregory A. Jicha, Gregory E. Cooper, Charles D. Smith, Allison M. Caban-Holt, Linda J. Van Eldik, Richard J. Kryscio

Sanders-Brown Center on Aging Faculty Publications

Aims: To evaluate the relationship between self-reported head injury and cognitive impairment, dementia, mortality, and Alzheimer's disease (AD)-type pathological changes. Methods: Clinical and neuropathological data from participants enrolled in a longitudinal study of aging and cognition (n = 649) were analyzed to assess the chronic effects of self-reported head injury. Results: The effect of self-reported head injury on the clinical state depended on the age at assessment: for a 1-year increase in age, the OR for the transition to clinical mild cognitive impairment (MCI) at the next visit for participants with a history of head injury was 1.21 and 1.34 …

The Human Metapneumovirus Small Hydrophobic Protein Has Properties Consistent With Those Of A Viroporin And Can Modulate Viral Fusogenic Activity, Cyril Masante, Farah El Najjar, Andres Chang, Angela Jones, Carole L. Moncman, Rebecca Ellis Dutch

Molecular and Cellular Biochemistry Faculty Publications

Human metapneumovirus (HMPV) encodes three glycoproteins: the glycoprotein, which plays a role in glycosaminoglycan binding, the fusion (F) protein, which is necessary and sufficient for both viral binding to the target cell and fusion between the cellular plasma membrane and the viral membrane, and the small hydrophobic (SH) protein, whose function is unclear. The SH protein of the closely related respiratory syncytial virus has been suggested to function as a viroporin, as it forms oligomeric structures consistent with a pore and alters membrane permeability. Our analysis indicates that both the full-length HMPV SH protein and the isolated SH protein transmembrane …

Arrhythmogenic Calmodulin Mutations Disrupt Intracellular Cardiomyocyte Ca2+ Regulation By Distinct Mechanisms, Guo Yin, Faisal Hassan, Ayman R. Haroun, Lisa L. Murphy, Lia Crotti, Peter J. Schwartz, Alfred L. George, Jonathan Satin

Physiology Faculty Publications

BACKGROUND: Calmodulin (CaM) mutations have been identified recently in subjects with congenital long QT syndrome (LQTS) or catecholaminergic polymorphic ventricular tachycardia (CPVT), but the mechanisms responsible for these divergent arrhythmia-susceptibility syndromes in this context are unknown. We tested the hypothesis that LQTS-associated CaM mutants disrupt Ca²⁺ homeostasis in developing cardiomyocytes possibly by affecting either late Na current or Ca²⁺-dependent inactivation of L-type Ca²⁺ current.

METHODS AND RESULTS: We coexpressed CaM mutants with the human cardiac Na channel (Na_V1.5) in tsA201 cells, and we used mammalian fetal ventricular cardiomyocytes to investigate LQTS- and CPVT-associated CaM …

Investigation Of Historical Japanese Paper: An Experiment To Recreate Recycled Paper From 18th-19th Century Japan, Kazuko Hioki

Library Presentations

This presentation will discuss the physical characteristics of recycled paper used for Japanese printed books from the18th to 19th century, exploring their production methods and historical developments based on the collaborative experiments with the University of Iowa’s Center for the Book (UICB).

The majority of conservation practices and studies of traditional Japanese paper-based artifacts have focused on the high end arts such as screen paintings and scrolls, luxuriously printed books (such as Sagabon), and certain ukiyoe prints and paintings. Conservators generally have limited knowledge about the printed books and materials used; however, they are the most commonly found traditional Japanese …

Withanolides, Probes And Binding Targets And Methods Of Use Thereof, Royce Mohan, Paola Bargagna-Mohan, Kyung Bo Kim

Ophthalmology and Visual Science Faculty Patents

Novel withanolide chemical genetic probes identify the in vivo binding target of withaferin A, which is the intermediate filament type III protein vimentin. In addition, a withanolide-based small molecule screening method screens drug candidates that target intermediate filament type III proteins. The method includes introducing a tagged linker covalently bonded to the withanolide molecule to form a withanolide probe. Better or alternative small molecule compounds as potential drug candidates can be generated based on their likely affinity for the determined binding site in vimentin. The affinity labeled withanolide can also be used to find intermediate filament-associated proteins using chemical proteomics …