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Phylogenetic And Cladistic Analyses Of The Enigmatic Genera Bituminaria And Cullen (Fabaceae) In Turkey, Sezen Toksoy, Meryem Şeker, Mehmet Sağiroğlu Jan 2015

Phylogenetic And Cladistic Analyses Of The Enigmatic Genera Bituminaria And Cullen (Fabaceae) In Turkey, Sezen Toksoy, Meryem Şeker, Mehmet Sağiroğlu

Turkish Journal of Botany

Three taxa of the genus Psoralea L. growing naturally in Turkey and the outgroup taxa belonging to the closest genera Vicia L., Cicer L., and Astragalus L. were subjected to molecular and quantitative morphological analyses in order to characterize their phylogenetic relationships. Both the taxonomical and the molecular characteristics of the tribes Psoraleeae (Bituminaria Heist. ex Fabr., Cullen Medik.), Vicieae (Vicia), Astragalae (Astragalus), and Cicereae (Cicer) were clearly revealed for the first time with the inter-simple sequence repeat (ISSR) method. The phylogenetic relationships were determined with 253 ISSR band scores and 125 quantitative morphological character measurements. The numerical and molecular …


Tanacetum Erzincanense (Asteraceae), A New Species From Erzincan, Turkey, Mustafa Korkmaz, Ali̇ Kandemi̇r, Veli̇ İlhan, Nalan Yildirim Doğan Jan 2015

Tanacetum Erzincanense (Asteraceae), A New Species From Erzincan, Turkey, Mustafa Korkmaz, Ali̇ Kandemi̇r, Veli̇ İlhan, Nalan Yildirim Doğan

Turkish Journal of Botany

In this study, Tanacetum erzincanense Korkmaz, Kandemir & İlhan is described as a new species for science from Erzincan Province. It was compared with close species by using morphological and random amplified polymorphic DNA data. It resembles T. germanicopolitanum (Bornm. & Heimerl) Grierson and T. pinnatum Boiss. It is closer to T. germanicopolitanum in terms of genetic and morphological aspects. Morphologically, it differs from T. germanicopolitanum by having oblong-oblanceolate basal leaves in outline with flabelliform and fewer leaf segments, less dense indumentum, smaller and globose capitula, and shorter apical appendage in inner phyllaries. T. pinnatum shows difference from T. erzincanense …


Taxonomic Revision Of The Genus Poa L. In Iran, New Additions To Flora Iranica, And A New Identification Key, Mahsa Kavousi, Mostafa Assadi, Taher Nejadsattari Jan 2015

Taxonomic Revision Of The Genus Poa L. In Iran, New Additions To Flora Iranica, And A New Identification Key, Mahsa Kavousi, Mostafa Assadi, Taher Nejadsattari

Turkish Journal of Botany

In this study, an identification key of Poa L. species in Iran and descriptions of all species are presented. Based on the results, 19 species and 4 subspecies of Poa are known from Iran. Two species, P. longifolia Trin. and P. sterilis M.Bieb., are new records for the flora of Iran. Some taxa such as P. versicolor Besser. subsp. araratica (Trautv.) Tzvelev and P. bactriana Roshev. subsp. glabriflora (Roshev. ex Ovcz.) Tzvelev were placed as subspecies. Poa supina Schrad. and P. aitchisonii Boiss. were not confirmed to occur in Iran since they were observed neither among the herbarium specimens nor …


A Computerized Image Database For Freshwater Algae Recorded In Turkey, Bülent Şen, Feray Sönmez, Ahmet Kadri̇ Çeti̇n, Mehmet Tahi̇r Alp, Tülay Özer, Kazim Yildiz, İlkay Açikgöz Erkaya, Abel Udo Udoh, Fatma Çevi̇k Jan 2015

A Computerized Image Database For Freshwater Algae Recorded In Turkey, Bülent Şen, Feray Sönmez, Ahmet Kadri̇ Çeti̇n, Mehmet Tahi̇r Alp, Tülay Özer, Kazim Yildiz, İlkay Açikgöz Erkaya, Abel Udo Udoh, Fatma Çevi̇k

Turkish Journal of Botany

A computer-based image database for freshwater algae recorded in Turkey has been established. A separate page was prepared for each algal taxon and each page includes images and taxonomic and ecological information related to the taxon. Algal images were obtained mainly from authors of algal studies previously carried out in various freshwater bodies in Turkey. Data were then standardized in accordance with that of the central database of Turkish herbaria and a database for Turkish freshwater algae, which were previously established through TÜBİTAK projects. The database program Access was used to enter data, as this program recognizes Turkish characters. A …


Cover And Contents Jan 2015

Cover And Contents

Turkish Journal of Botany

No abstract provided.


Assessment Of Species Diversity And State Of Stipa Tenacissima Steppes, Wahida Ghiloufi, Jose Luis Quero Perez, Miguel Garcia Gomez, Mohamed Chaieb Jan 2015

Assessment Of Species Diversity And State Of Stipa Tenacissima Steppes, Wahida Ghiloufi, Jose Luis Quero Perez, Miguel Garcia Gomez, Mohamed Chaieb

Turkish Journal of Botany

North African steppes are subjected to extreme degradation resulting in the reduction of their surface, genetic erosion of resources, and decrease in biodiversity. Stipa tenacissima steppes, which constitute one of the most representative vegetation types in the driest areas of the Mediterranean basin, are continuously degrading. With the aim of contributing to a better knowledge of the floristic composition and diagnosing the state of degradation of these steppes, we conducted a phytoecological analysis of 10 S. tenacissima sites in Tunisia. Floristic inventory compiled a systematic list of 46 vascular plant species belonging to 43 genera and 26 families. Species richness …


Isolation And Expression Analysis Of Ethylene Receptor Genes From Melon(Cucumis Melo) Fruit, Yaşar Karakurt, Nazan Gökteki̇n, Hali̇me Ünlü Jan 2015

Isolation And Expression Analysis Of Ethylene Receptor Genes From Melon(Cucumis Melo) Fruit, Yaşar Karakurt, Nazan Gökteki̇n, Hali̇me Ünlü

Turkish Journal of Botany

Ethylene receptors are involved in ethylene sensing and signal transduction. This study was conducted to isolate genes encoding ethylene receptors from melon fruit and to determine their expression during postharvest fruit ripening. The amplification of melon fruit cDNA with degenerate primers revealed two partial cDNAs. Upon 3' and 5' RACE analysis of the cDNAs, two full length genes designated Cm-ETR1 and Cm-ETR2 were obtained. Cloning and sequencing of the genes showed that Cm-ETR1 and Cm-ETR2 genes were 2320 and 2537 bp in length, respectively. Cm-ETR1 had a predicted open reading frame (ORF) of 2223 nucleotides encoding a protein of 740 …


Seed Morphology Of Some Silene L. (Caryophyllaceae) Species Collected From Turkey, Mehmet Yaşar Dadandi, Kemal Yildiz Jan 2015

Seed Morphology Of Some Silene L. (Caryophyllaceae) Species Collected From Turkey, Mehmet Yaşar Dadandi, Kemal Yildiz

Turkish Journal of Botany

The seed micro- and macromorphology of 39 Silene taxa were studied by stereomicroscope and scanning electron microscope. Quantitative (9) and qualitative (11) values of seed characters vary greatly both within and between taxa. The tree topology of UPGMA based on quantitative values does not supported the traditional relationship. Therefore, we concluded that seed characters of Silene alone cannot be used to describe taxa without detecting the full range of intra- and intertaxon variation of those characters.


A New Species Of Teucrium Sect. Stachyobotrys (Lamiaceae) From The South Of Turkey, Meci̇t Vural, Hayri̇ Duman, Tuncay Di̇rmenci̇, Taner Özcan Jan 2015

A New Species Of Teucrium Sect. Stachyobotrys (Lamiaceae) From The South Of Turkey, Meci̇t Vural, Hayri̇ Duman, Tuncay Di̇rmenci̇, Taner Özcan

Turkish Journal of Botany

A new species of Teucrium L., Teucrium aladagense Vural & H.Duman, is described from Aladağ mountain, located in Adana, Kayseri, and Niğde provinces in Turkey. The species belongs to Teucrium L. sect. Stachyobotrys Benth. A description, distribution map, habitat, information on trichome morphology, and the threatened category of the species are provided. The differences between the new species and its allies T. lamiifolium d'Urv s.l. and T. hircanicum L. are discussed, and an identification key is provided for the identification of similar taxa.


New Species Of Aporomyces, Walter Rossi, Sergi Santamaria Jan 2015

New Species Of Aporomyces, Walter Rossi, Sergi Santamaria

Turkish Journal of Botany

Three new species of Aporomyces (Laboulbeniomycetes) parasitic on beetles from Ecuador are described. These are A. aequatorialis, parasitic on Byrrhinus near B. plenus (Limnichidae); A. benjaminii, parasitic on Plagiogramma sp. (Histeridae); and A. maximus, parasitic on Byrrhinus cf. maculatus. A key to all the species in the genus Aporomyces is given.


Turkish Truffles I: 18 New Records For Turkey, Azi̇z Türkoğlu, Michael Angelo Castellano, James Martin Trappe, Mehri̇can Yaratanakul Güngör Jan 2015

Turkish Truffles I: 18 New Records For Turkey, Azi̇z Türkoğlu, Michael Angelo Castellano, James Martin Trappe, Mehri̇can Yaratanakul Güngör

Turkish Journal of Botany

We report the first records of 18 truffle species in Turkey. Three belong to the Ascomycota: Elaphomyces leucocarpus, E. muricatus, and Genea sphaerica; and 15 to the Basidiomycota: Alpova corsicus, Gautieria otthii, G. retirugosa, G. trabutii, Hymenogaster citrinus, H. hessei, H. luteus, H. lycoperdineus, Hysterangium clathroides, H. epiroticum, H. fragile, H. nephriticum, Leucogaster tozzianus, Octaviania asterosperma, and Protoglossum aromaticum. We also report new localities within Turkey for Picoa juniperi, P. lefebvrei, Geopora cooperi, Terfezia arenaria, T. claveryi, Tuber aestivum, and T. nitidum in the Ascomycota; and Leucogaster nudus, Hymenogaster thwaitesii, H. vulgaris, and Melanogaster broomeanus in the Basidiomycota.


Cover And Contents Jan 2015

Cover And Contents

Turkish Journal of Botany

No abstract provided.


A New Systematic And Flexible Method For Developing Hierarchical Decision-Making Models, Ulaş Beldek, Mehmet Kemal Leblebi̇ci̇oğlu Jan 2015

A New Systematic And Flexible Method For Developing Hierarchical Decision-Making Models, Ulaş Beldek, Mehmet Kemal Leblebi̇ci̇oğlu

Turkish Journal of Electrical Engineering and Computer Sciences

The common practice in multilevel decision-making (DM) systems is to achieve the final decision by going through a finite number of DM levels. In this study, a new multilevel DM model is proposed. This model is called the hierarchical DM (HDM) model and it is supposed to provide a flexible way of interaction and information flow between the consecutive levels that allows policy changes in DM procedures if necessary. In the model, in the early levels, there are primary agents that perform DM tasks. As the levels increase, the information associated with these agents is combined through suitable processes and …


An Intelligence-Based Islanding Detection Method Using Dwt And Ann, Mehrdad Heidari, Ghodratollah Seifossadat, Morteza Razaz Jan 2015

An Intelligence-Based Islanding Detection Method Using Dwt And Ann, Mehrdad Heidari, Ghodratollah Seifossadat, Morteza Razaz

Turkish Journal of Electrical Engineering and Computer Sciences

In this paper, a new method based on artificial neural network (ANN) and discrete wavelet transform (DWT) is proposed for electrical islanding detection. Transient signals produced during an event are used in the proposed method. ANN is trained to classify the transient events as islanding and nonislanding. The required features for classifying are extracted through DWT of voltage and current transient signals. The proposed method is then simulated on a medium voltage distribution system of CIGRE with 2 kinds of DGs. Results show that this method can detect electrical islands more rapidly and accurately.


Improving The Performance Of Primal--Dual Interior-Point Method In Inverse Conductivity Problems, Ashkan Javaherian, Amir Movafeghi, Reza Faghihi, Effat Yahaghi Jan 2015

Improving The Performance Of Primal--Dual Interior-Point Method In Inverse Conductivity Problems, Ashkan Javaherian, Amir Movafeghi, Reza Faghihi, Effat Yahaghi

Turkish Journal of Electrical Engineering and Computer Sciences

This study improves the performance of primal--dual interior-point method in inverse conductivity problems via replacing the conventional, complicatedly calculated scalar regularization parameter with a diagonal matrix termed ``multi-regularization parameter matrix'' here. The solution of the PD--IPM depends considerably on the choice of the regularization parameter. Calculation of the optimal regularization parameter, which yields the most accurate solution, is not simple due to the long iterative nature of the algorithm. The objective optimization, which is implemented by minimizing error in the solutions over an extensive range of the regularization parameters, yields the most accurate solution that can be achieved, although this …


Continuous-Time Hopfield Neural Network-Based Optimized Solution To 2-Channel Allocation Problem, Zekeri̇ya Uykan Jan 2015

Continuous-Time Hopfield Neural Network-Based Optimized Solution To 2-Channel Allocation Problem, Zekeri̇ya Uykan

Turkish Journal of Electrical Engineering and Computer Sciences

The channel allocation problem in cellular radio systems is NP-complete, and thus its general solution is not known for even the 2-channel case. It is well known that the link gain system matrix (or received-signal power system matrix) of the radio network is (and may be highly) asymmetric, and that as the Hopfield neural network is applied to optimization problems, its weight matrix should be symmetric. The main contribution of this paper is as follows: turning the channel allocation problem into a maxCut graph partitioning problem, we propose a simple and effective continuous-time Hopfield neural network-based solution by determining its …


Detection Of Microcalcification In Digitized Mammograms With Multistable Cellular Neural Networks Using A New Image Enhancement Method: Automated Lesion Intensity Enhancer (Alie), Levent Ci̇vci̇k, Burak Yilmaz, Yüksel Özbay, Gani̇me Di̇lek Emli̇k Jan 2015

Detection Of Microcalcification In Digitized Mammograms With Multistable Cellular Neural Networks Using A New Image Enhancement Method: Automated Lesion Intensity Enhancer (Alie), Levent Ci̇vci̇k, Burak Yilmaz, Yüksel Özbay, Gani̇me Di̇lek Emli̇k

Turkish Journal of Electrical Engineering and Computer Sciences

Microcalcification detection is a very important issue in early diagnosis of breast cancer. Generally physicians use mammogram images for this task; however, sometimes analyzing these images become a hard task because of problems in images such as high brightness values, dense tissues, noise, and insufficient contrast level. In this paper, we present a novel technique for the task of microcalcification detection. This technique consists of three steps. The first step is focused on removing pectoral muscle and unnecessary parts from the mammogram images by using cellular neural networks (CNNs), which makes this a novel process. In the second step, we …


Emg Classification In Obstructive Sleep Apnea Syndrome And Periodic Limb Movement Syndrome Patients By Using Wavelet Packet Transform And Extreme Learning Machine, Necmetti̇n Sezgi̇n Jan 2015

Emg Classification In Obstructive Sleep Apnea Syndrome And Periodic Limb Movement Syndrome Patients By Using Wavelet Packet Transform And Extreme Learning Machine, Necmetti̇n Sezgi̇n

Turkish Journal of Electrical Engineering and Computer Sciences

Electromyogram (EMG) signals, measured at the skin surface, provide crucial access to the muscle tones of a body. Some diseases, such as obstructive sleep apnea syndrome (OSAS) and periodic limb movement syndrome (PLMS), are closely associated with the electrical activity of muscle tones. In this paper, a hybrid model containing wavelet packet transform (WPT) plus an extreme learning machine (ELM) was proposed to classify EMG signals in OSAS and PLMS patients. At first, the WPT was used to extract the features of the EMG signal, and then these features were fed to the ELM classifier. The mean classification accuracy of …


A Comparative Study Of Denoising Semg Signals, Ulvi̇ Başpinar, Volkan Yusuf Şenyürek, Bariş Doğan, Hüseyi̇n Selçuk Varol Jan 2015

A Comparative Study Of Denoising Semg Signals, Ulvi̇ Başpinar, Volkan Yusuf Şenyürek, Bariş Doğan, Hüseyi̇n Selçuk Varol

Turkish Journal of Electrical Engineering and Computer Sciences

Denoising of surface electromyography (sEMG) signals plays a vital role in sEMG-based mechatronics applications and diagnosis of muscular diseases. In this study, 3 different denoising methods of sEMG signals, empirical mode decomposition, discrete wavelet transform (DWT), and median filter, are examined. These methods are applied to 5 different levels of noise-added synthetic sEMG signals. For the DWT-based denoising technique, 40 different wavelet functions, 4 different threshold-selection-rules, and 2 threshold-methods are tested iteratively. Three different window-sized median filters are applied as well. The SNR values of denoised synthetic signals are calculated, and the results are used to select DWT and median …


A Model-Based Edge Estimation Method With Increased Edge Localization Accuracy For Medical Images, Mehmet Öztürk, Temel Kayikçioğlu Jan 2015

A Model-Based Edge Estimation Method With Increased Edge Localization Accuracy For Medical Images, Mehmet Öztürk, Temel Kayikçioğlu

Turkish Journal of Electrical Engineering and Computer Sciences

This study proposes an improved method based on a nonlinear parametric model for intensity profile to increase the edge localization accuracy in medical images gathered from different imaging modalities. The edge model consists of three parameters associated with an edge point. It also takes into account local background intensity, noise, and blurring. The Marquardt-Levenberg algorithm is used to estimate the parameters because of its accuracy and good convergence rate. Performance of the proposed method is tested quantitatively by comparing the results with those of the well-known active contour method on synthetic vessel images. Qualitative comparisons on real MRI, coronary angiography, …


Regulation Of Methane Gas Output From An Anaerobic Reactor System Using Moving Horizon $H_{\Infty }$ Control, Fatma Yildiz Taşcikaraoğlu, Şeref Naci̇ Engi̇n Jan 2015

Regulation Of Methane Gas Output From An Anaerobic Reactor System Using Moving Horizon $H_{\Infty }$ Control, Fatma Yildiz Taşcikaraoğlu, Şeref Naci̇ Engi̇n

Turkish Journal of Electrical Engineering and Computer Sciences

In this study, the moving horizon $\mathcal{H}_{\infty }$\textbf{ }control used for tracking a desired methane gas output from an anaerobic wastewater treatment reactor is compared with classical $\mathcal{H}_{\infty }$ control and a proportional-integral-derivative controller. The nonlinear system is first linearized around the set of equilibrium and operating points selected, and then the linear matrix inequalities required to comply with the constraints and guarantee the stability are constructed. Finally, the experimental results are obtained by implementing the control method in a MATLAB environment. It is concluded that moving horizon $\mathcal{H}_{\infty }$ control yields satisfactory results.


Fast Bitwise Pattern-Matching Algorithm For Dna Sequences On Modern Hardware, Giyasetti̇n Özcan, Osman Sabri̇ Ünsal Jan 2015

Fast Bitwise Pattern-Matching Algorithm For Dna Sequences On Modern Hardware, Giyasetti̇n Özcan, Osman Sabri̇ Ünsal

Turkish Journal of Electrical Engineering and Computer Sciences

We introduce a fast bitwise exact pattern-matching algorithm, which speeds up short-length pattern searches on large-sized DNA databases. Our contributions are two-fold. First, we introduce a novel exact matching algorithm designed specifically for modern processor architectures. Second, we conduct a detailed comparative performance analysis of bitwise exact matching algorithms by utilizing hardware counters. Our algorithmic technique is based on condensed bitwise operators and multifunction variables, which minimize register spills and instruction counts during searches. In addition, the technique aims to efficiently utilize CPU branch predictors and to ensure smooth instruction flow through the processor pipeline. Analyzing letter occurrence probability estimations …


Bifurcation And Dynamics Of A Normal Form Map, Reza Khoshsiar Ghaziani Jan 2015

Bifurcation And Dynamics Of A Normal Form Map, Reza Khoshsiar Ghaziani

Turkish Journal of Mathematics

This paper investigates the dynamics and stability properties of a so-called planar truncated normal form map. This kind of map is widely used in the applied context, especially in normal form coefficients of n-dimensional maps. We determine analytically the border collision bifurcation curves that characterize the dynamic behaviors of the system. We first analyze stability of the fixed points and the existence of local bifurcations. Our analysis shows the presence of a rich variety of local bifurcations, namely stable fixed points, periodic cycles, quasiperiodic cycles that are constraints to stable attractors called invariant closed curves, and chaos, where dynamics of …


Spreading Speeds In A Lattice Differential Equation With Distributed Delay, Huiling Niu Jan 2015

Spreading Speeds In A Lattice Differential Equation With Distributed Delay, Huiling Niu

Turkish Journal of Mathematics

This paper studies the spreading speed for a lattice differential equation with infinite distributed delay and we find that the spreading speed coincides with the minimal wave speed of traveling waves. Here the model has been proposed to describe a single species living in a 1D patch environment with infinite number of patches connected locally by diffusion.


Inhibitory Effects Of Salicylic Acid On A549 Human Lung Adenocarcinoma Cell Viability, Djanan Vejselova, Hati̇ce Mehtap Kutlu Jan 2015

Inhibitory Effects Of Salicylic Acid On A549 Human Lung Adenocarcinoma Cell Viability, Djanan Vejselova, Hati̇ce Mehtap Kutlu

Turkish Journal of Biology

Antiinflammatory drugs, such as salicylic acid and its metabolite acetylsalicylic acid, have been singled out as apoptosis-inducing agents with antitumoral activity. In addition, they reduce the risk of some cancers via an unclear mechanism. In this study, we have investigated the apoptotic, cytotoxic, and growth-inhibiting effects of salicylic acid on A549, the human lung adenocarcinoma, alveolar epithelial cells. Cytotoxicity was tested using the MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide) colorimetric assay. We observed the ultrastructural and morphological changes in A549 cells by using transmission electron microscopy (TEM) and confocal microscopy. Cell viability was decreased by the optimal concentration (IC50) of 6.0 mM salicylic …


An Extracellular Antifungal Chitinase From Lecanicillium Lecanii: Purification, Properties, And Application In Biocontrol Against Plant Pathogenic Fungi, Huu Quan Nguyen, Dinh Thi Quyen, Sy Le Thanh Nguyen, Van Hanh Vu Jan 2015

An Extracellular Antifungal Chitinase From Lecanicillium Lecanii: Purification, Properties, And Application In Biocontrol Against Plant Pathogenic Fungi, Huu Quan Nguyen, Dinh Thi Quyen, Sy Le Thanh Nguyen, Van Hanh Vu

Turkish Journal of Biology

An extracellular antifungal chitinase from L. lecanii strain 43H was purified by ammonium sulfate precipitation and DEAE-Sephadex A-50 ion exchange chromatography; it showed a molecular mass of approximately 33 kDa with a specific activity of 167.5 U/mg protein and purification factor of 2.5. Optimum temperature and pH were observed at 40 °C and pH 6.0, respectively. This enzyme was stable at up to 40 °C and at pH 5.0-6.0. The kinetic constants K_m and V_{max} determined for the chitinase with colloidal chitin as substrate was 0.82 mg/mL and 4.51 U/mg, respectively. The presence of 5-15 mM tested metal ions led …


Genome-Wide Distribution Of Superoxide Dismutase (Sod) Gene Families In Sorghum Bicolor, Ertuğrul Fi̇li̇z, Hüseyi̇n Tombuloğlu Jan 2015

Genome-Wide Distribution Of Superoxide Dismutase (Sod) Gene Families In Sorghum Bicolor, Ertuğrul Fi̇li̇z, Hüseyi̇n Tombuloğlu

Turkish Journal of Biology

Superoxide dismutases (SODs) are critical enzymes protecting cells against toxic superoxide radicals. To date, 3 types of SODs have been identified: Cu-ZnSODs, Fe-MnSODs, and NiSODs. In this study, a genome-wide analysis was performed in Sorghum bicolor to characterize SOD genes and proteins. Using several bioinformatics tools, we characterized a total of 8 SOD genes from the Sorghum genome. Gene structure, chromosomal distribution, tissue specific expression, conserved domain, and phylogenetic analyses of SOD genes were carried out. Additionally, 3-dimensional structures were determined and compared within each SbSOD protein. Chromosomal distributions revealed that the highest number of SOD genes was on chromosomes …


In Vitro Plant Regeneration Of 4 Capsicum Spp. Genotypes Using Different Explant Types, Marta Orlinska, Pawel Nowaczyk Jan 2015

In Vitro Plant Regeneration Of 4 Capsicum Spp. Genotypes Using Different Explant Types, Marta Orlinska, Pawel Nowaczyk

Turkish Journal of Biology

This study evaluates the effectiveness of in vitro regeneration of 4 genotypes of pepper (Capsicum spp.) that differ in origin and functional properties: California Wonder, (ATZ × Sono)F_1, Jalapeno, and SF-9. In order to investigate the effect of the initial explant type, photoperiod, and presence of 2.0 mg L^{-1} of glycine in the medium, organogenesis was induced on the MS medium with 2.0 g L^{-1} 2-(N-morpholine) ethanesulfonic acid, 1.7 mg L^{-1} AgNO_3, 0.4 mg L^{-1} indole-3-acetic acid (IAA), and 6.0 mg L^{-1} 6-benzyladenine. The effectiveness of organogenesis in the 3 genotypes representing C. annuum L. was similar and considerably lower …


E-Microsatellite Markers For Some Naturally Occurring Salvia Species In The Mediterranean Region, Ayşe Gül İnce, Mehmet Karaca Jan 2015

E-Microsatellite Markers For Some Naturally Occurring Salvia Species In The Mediterranean Region, Ayşe Gül İnce, Mehmet Karaca

Turkish Journal of Biology

The genus Salvia L. contains about 1000 species, more than 40 of which are endemic to the Mediterranean region. Species boundaries and classifications of this genus have been mainly conducted based on morphological and anatomical characteristics. Although genomic and genic microsatellites are commonly used in a variety of genetic studies in many plant and animal species, their use has been limited in Salvia species. This research was undertaken to study microsatellite contents of expressed sequence tags (ESTs) and develop a new set of expressed-microsatellite (e-microsatellite) markers using the GenBank databases. In in silico studies of the research, microsatellites were identified …


Evaluation Of The Genotoxic Or Mutagenic Effects Of Thermal Stress On Cultured Human Lymphocytes, Hasan Basri̇ İla, Mehmet Topaktaş, Mehmet Arslan, Mehmet Büyükleyla, Erman Sali̇h İsti̇fli̇ Jan 2015

Evaluation Of The Genotoxic Or Mutagenic Effects Of Thermal Stress On Cultured Human Lymphocytes, Hasan Basri̇ İla, Mehmet Topaktaş, Mehmet Arslan, Mehmet Büyükleyla, Erman Sali̇h İsti̇fli̇

Turkish Journal of Biology

This study was performed to determine the cytogenetic effects of short-term thermal stress in human cultured lymphocytes. Experimental heat shock (39 °C) was performed alone or with the addition of mitomycin C (MMC) to determine the synergistic or antagonistic effects of heat shock on genotoxicity induced by MMC. In this study, during culture periods of 72 h, human peripheral blood lymphocytes were exposed to heat shock for specified durations (30, 60, 120, and 240 min) 24 or 48 h before harvest. According to our results, the selected temperatures did not show genotoxic or mutagenic effects. In summary, the heat shock …