Digital Commons Network^™

Splai: Computational Finite Element Model For Sensor Networks, Ruzana Ishak, Shadaruddin Salleh, Stephan Olariu, Mohd.Ismail Abdul Aziz

Computer Science Faculty Publications

Wireless sensor network refers to a group of sensors, linked by a wireless medium to perform distributed sensing task. The primary interest is their capability in monitoring the physical environment through the deployment of numerous tiny, intelligent, wireless networked sensor nodes. Our interest consists of a sensor network, which includes a few specialized nodes called processing elements that can perform some limited computational capabilities. In this paper, we propose a model called SPLAI that allows the network to compute a finite element problem where the processing elements are modeled as the nodes in the linear triangular approximation problem. Our model …

Age Validation And Reproductive Biology Of Bluefish, Pomatomus Saltatrix, Along The East Coast Of United States, Eric Robillard

OES Theses and Dissertations

I describe a new preparation technique that increases readability of otoliths, along with criteria for the interpretation of otolith microstructure of bluefish, Pomatomus saltatrix, collected from Florida to New York during 2001-2003 (n = 2652). I validated annulus formation in otoliths for ages 1 to 8 using marginal increment analysis and thus extended validation by four years to include the preponderance of age classes in the catch. Although otoliths are typically superior for ageing, bluefish are routinely aged with scales; thus a side-by-side comparison of otoliths versus scales is necessary before otoliths can supplant scales. When compared, precision …

Isolation And Functional Mapping Of Human T-Cell Leukemia Virus Type 1 Tax Oncoprotein Dna-Damage Complexes, Sarah Saionz Durkin

Theses and Dissertations in Biomedical Sciences

Human T-cell Leukemia Virus Type 1 (HTLV-1) is a transforming retrovirus which causes Adult T-cell Leukemia (ATL) and HTLV-1 Associated Myelopathy/Tropical Spastic Paraparesis (HAM/TSP). Cellular transformation can be caused by a single viral trans-activating protein, Tax. Tax may contribute to transformation through interaction with components of the DNA damage response pathway, promoting cellular genomic instability. We examined cellular Tax complexes in an effort to elucidate potential protein-protein interactions that can model the Tax-induced molecular events.

We also investigated the role of post-translational modification in regulating Tax function. We employed a direct physical analysis of Tax complexes isolated from mammalian …

The Use Of Proteomic Technologies To Identify Serum Glycoproteins For The Early Detection Of Liver And Prostate Cancers, Elizabeth Ellen Schwegler

Theses and Dissertations in Biomedical Sciences

The application of proteomic technologies to identify serum glycoproteins is an emerging technique to identify new biomarkers indicative of disease severity. Many of these newly evolving protein-profiling methodologies have evolved from previous global protein expression profiling studies such as those involving SELDI-TOF-MS technologies. Though the SELDI approach could distinguish disease from normal by utilizing protein patterns as shown herein with the HCC study of chapter II, it was unable to offer sequence information on the selected peaks, and did not have the ability to analyze the entire dynamic range of the serum/plasma proteome. To address these deficiencies, new strategies that …

Fourier Transform Analysis Of Terahertz Radiation, Chikaodira N. Okpo

Electrical & Computer Engineering Theses & Dissertations

Advances in terahertz radiation (T-rays) technology have great promise in various technological areas ranging from medical technology, imaging technology and accelerator technology. At Thomas Jefferson Laboratory, the Free Electron Laser division (FEL) produces very powerful beam of laser light by accelerating electrons in bunches along a beamline. This laser light absorbs and releases energy at various wavelengths. The new FEL upgrade led to the production of very bright terahertz (THz) radiation with an average power of 1 00watts which is about 100,000 times brighter than those produced elsewhere. These T-rays have very significant applications in the Laboratory. The most significant …

Natural And Synthetic Viniferins Associated With The Grapevine Disease Young Vine Decline, David Michael Mcginnis

Chemistry & Biochemistry Theses & Dissertations

Grapevine disease has been thc subject of intense research amongst viticulturists over the last few decades, especially during the 1990's. There has been discoveries that suggest grapevine disease is commonly caused by fungal pathogens. One of the most common fungi that the vine may become infected by is known as Botrytis cinerea. B. cinerea is capable of attacking the grapevine which in turn will lead to bunch rot in the grape clusters. This disease has been researched in great detail during the past several years and is one of only few microorganisms that have actually been identified. Phaeoacremrmium chnlmydospnrum …

Alien(Ating) Naturecultures: Feminist Sf As Creative Science Studies, Helen Merrick

Reconstruction: Studies in Contemporary Culture

“Alien(ating) Naturecultures” examines the potential of feminist science fictions to act as “cross-cultural” narratives in encounters between the humanities and sciences. Merrick argues that the conjunction of disciplines figured by the term “science fiction” bears re-examination as a resource for science studies, and a potential mediator in science-humanities dialogues.

Specifically, Merrick asks, when we are concerned with critiquing and unpacking technoscientific practices, cultures and knowledges, what can more creative forms such as science fiction (sf) offer? Such questions about “naturecultures” are intimately connected to the ways we construct and understand “life,” the “human” and difference in the discourses of Science. …

Characterization Of Pfiesteria Ichthyocidal Activity, Andrew S. Gordon, Harold G. Marshall, Sandra E. Shumway, Kathryn J. Coyne, Alan J. Lewitus, Michael A. Mallin, Parke A. Rublee

Biological Sciences Faculty Publications

Letter to the Editor regarding article: Drgon, T., et al. 2005. Characterization of ichthyocidal activity of Pfiesteria piscicida: Dependence on the dinospore cell density. Appl. Environ. Microbiol. 71:519–529

Fish Consumption Patterns Of Populations In Vicinities Of Lake Kastoria And Lake Pamvotis, Greece, Eugene G. Maurakis, David V. Grimes, Dimitra Bobori

Virginia Journal of Science

Objectives are to establish fish consumption patterns of populations in vicinities of two lakes (Kastoria and Pamvotis) in Greece for use in the assessment of risks associated with consumption of fishes in these agri-chemically impaired lakes. Parameters measured were demographics (i.e., gender, age, weight, education level, occupation, residency), freshwater fish eating frequency, species and sizes of fishes consumed, and fish consumption habits [i.e., quantity, parts, and preparation method). All annual mean site-specific consumption rates of the four gender-age class sub-populations surveyed in vicinity of Lake Kastoria (avg. range= 0.103-0.29 kg/day) exceed those of Greece (0.066 kg/day), EU (0.068 kg/day), Spain …

Assessment Of Human Health Risks From Chemically Contaminated Lake Fishes In Greece, Eugene G. Maurakis, David V. Grimes, Dimitra Bobori, Rob Hale, Jennifer Jones

Virginia Journal of Science

Objectives were to conduct screening level surveys of locally consumed fish tissues in vicinities of two lakes (Kastoria and Pamvotis) in Greece to determine the presence of halogenated organic compounds and determine carcinogenic and non-carcinogenic human health risks associated with the consumption of sampled fish tissues. Results estimate the Incremental Lifetime Cancer Risks (ILCR) and Hazard Index (HI) values for the two local populations using site-specific population data. These results were compared to analyses conducted using U.S. Environmental Protection Agency default values in an effort to determine the applicability of USEPA default values to assessments of risks in non U.S. …

Prospects Of Kenaf As An Alternative Field Crop In Virginia, Harbans L. Bhardwaj, Charles L. Webber Iii

Virginia Journal of Science

Kenaf (Hibiscus cannabinus L.), a warm-season annual plant, has shown potential as an alternate source of fiber in the United States. Although preliminary research has indicated feasibility of kenaf production in Virginia, production details are lacking. Field experiments were conducted during 1995 and 1996 to determine optimal row spacing and fertilizer needs, and to compare available kenaf cultivars. Although results indicated that differences in dry matter yields from four row spacings (30, 60, 90, and 120 cm) and four rates each of N, P, and K fertilizers (50, 100, 150, and 200 kg ha^-1) were not …

Section Abstracts: Education, Virginia Journal Of Science

Virginia Journal of Science

Abstracts of the Education Section for the 83rd Annual Virginia Academy of Science Meeting, May 19-20, at James Madison University, Harrisonburg, Virginia.

It's Not Easy Being A Cast Iron Bitch: Sexual Difference And The Female Action Hero, Diana Dominguez

Reconstruction: Studies in Contemporary Culture

Lt. Ellen Ripley of the Alien series of films, Sarah Connor of the Terminator series, and Lindsey Brigman of The Abyss are examples of a special category of female role in Hollywood – the female action hero. To varying degrees of success, the three characters mentioned above defy the principal dilemma filmmakers seem to have in creating a character that can reconcile the presumably mutually exclusive aspects of cast iron bitch and traditional patriarchal societal views of femininity. Ripley, Connor, and Brigman infiltrate the male-dominated category of the action hero, but they are not a direct feminine challenge to the …

The Trouble With Trills: Gender And Consciousness In Star Trek, Susan J. Wolfe

Reconstruction: Studies in Contemporary Culture

The Star Trek series, which have been both praised for radical inclusiveness and criticized for their neo-conservative agendas, de-essentialize identity, gender, and sexual orientation through their depictions of the Trill, an alien race in which humanoids join with symbionts, slug-like creatures each of which lives in the abdominal cavity of its host, with whom it then shares a single fused consciousness. Hosts are selected independently of their sex, so that a symbiont dwells alternatively inside males and females; each new host, as well as the symbiont, is heir to the memories of all previous hosts.

The notions of unified selves …

Ozone Concentration In An Atmospheric Pressure Air Plasma Jet, Srinivas Reddy Suddala

Electrical & Computer Engineering Theses & Dissertations

A stable micro-plasma jet in air was generated from a direct current discharge between two molybdenum electrodes (0.25 mm thick) that were separated by an alumina insulator of the same thickness. The after-glow plasma jet was generated by blowing air through the space between the electrodes. A change from laminar to turbulent flow was observed at a gas flow rate of 140 ml/min. The length of the plasma jet increased with flow rate in the laminar mode to approximately 15 mm and decreased in the turbulent mode.

Increasing the gas flow rate up to 200 ml/min at a constant discharge …

Chromosomal Localization Of The Islet Neogenesis Associated Protein (Ingap) Gene In Syrian Hamster By Tyramide Signal Amplification-Fluorescence In Situ Hybridization (Tsa-Fish), Sallie A. Smith

Biological Sciences Theses & Dissertations

Diabetes mellitus is a group of conditions characterized by hyperglycemia due to an inability to produce or properly utilize insulin. The majority of cases fall into two categories, Type I and Type 2. Type I results from the autoimmune destruction of pancreatic β-cells of the islets. The beta cells are the exclusive source of insulin and the patient becomes entirely dependent on exogenous insulin to survive. Patients with Type 2 are distinguished by insulin resistance, a condition that develops due to the inability of the body to effectively use the insulin being produced. The β-cells gradually lose their ability to …

Benthic Biological Monitoring Program Of The Elizabeth River Watershed (2004), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

Macrobenthic communities of the Elizabeth River watershed have been quantitatively sampled since summer 1999. This report presents the data from the sixth year of sampling in 2004. The three objectives of the Benthic Biological Monitoring Program of the Elizabeth River watershed are: (1) To characterize the health of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. ( 2) To conduct trend analyses on long-term data at 14 fixed-point stations to relate temporal trends in the benthic communities to changes in water and/or sediment quality. Trend analyses will be updated …

Characteristics Of Bipolar Disorder In Adult Favorite Weather Drawings, Carrie L. Elder

EVMS School of Health Professions Theses & Dissertations

The purpose of this study was to identify graphic indicators of Bipolar Disorder in Favorite Weather Drawings. The subjects in this study consisted of 9 individuals diagnosed with a Bipolar Disorder and 16 individuals without a Bipolar Disorder diagnosis. The age range was 22 to 64 years. It was hypothesized that Favorite Weather Drawings rendered by individuals diagnosed with Bipolar Disorder would differ in color, expansiveness, line quality, and weather themes from Favorite Weather Drawings rendered by individuals without a diagnosis of Bipolar Disorder. These differences were measured using a Favorite Weather Drawing Checklist and analyzed for resulting patterns.

This …

Phytoplankton Development Within Tidal Freshwater Regions Of Two Virginia Rivers, Harold G. Marshall, Lubomira Burchardt

Virginia Journal of Science

Phytoplankton composition and the range of seasonal patterns of abundance are presented for the tidal freshwater regions in two Virginia rivers based on data accumulated monthly from 1986 through 1999. Diatoms dominated the flora during spring, summer, and fall, whereas, other taxonomic categories were more representative when the river flow rates decreased, allowing for a more stable water system and increased residency time within this tidal region during summer and early fall. This summer/fall period was associated with increased water temperatures, higher productivity rates and chlorophyll levels, increased total phytoplankton abundance and species diversity. The major components of the summer …

Bats Of Skydusky Hollow, Bland County, Virginia, Virgil Brack Jr., Richard J. Reynolds, Wil Orndorff, Joe Zokaites, Carol Zokaites

Virginia Journal of Science

During the period 22 November 1999 – 11 October 2001, winter hibernacula surveys, spring staging/autumn swarming surveys, and summer surveys for bats were completed in caves of Skydusky Hollow, Bland County, Virginia. During winter, 12 caves were entered and 16,185 bats counted: 235 Myotis sodalis (Indiana bat), 14,475 Myotis lucifugus (little brown myotis), 12 Myotis septentrionalis (northern myotis), 7 Myotis leibii (eastern small-footed myotis), 1,441 Pipistrellus subflavus (eastern pipistrelle), and 15 Eptesicus fuscus (big brown bat). Myotis sodalis hibernated in thermally stable areas of 7 -9 ̊C. The largest concentration of M. lucifugus (n = 4,280) hibernated in an area …

Jeffress Research Grant Awards, Virginia Journal Of Science

Virginia Journal of Science

Announcements of the Jeffress Research Grants that have been awarded in 2003.

Coping And Depressive Symptoms In Individuals With Multiple Sclerosis, Scott W. Huffman

Psychology Theses & Dissertations

It is estimated that 40% to 60% of individuals with Multiple Sclerosis (MS) may be clinically depressed (Biogen, 2002; Chwastiak et al., 2002; Parcells, 2003; Ranger, 2002). Feeling depressed may be inevitable when a person is initially diagnosed with MS. Over time, however, depression may hinder the person's ability to cope with the specific challenges of MS and diminish day-to-day functioning.

Although extensive research has examined the prevalence of depression among individuals with MS, few researchers have examined the relationship between coping style and depression in individuals with MS. The goal of the present study was to identify the coping …

Interannual Variation Of Stratification In Lower Chesapeake Bay, Christopher S. Katzenmiller

OES Theses and Dissertations

Stratification in the water column can prove to be an important indicator to the state of the water column and ecosystem. The focus of this research is to evaluate trends in stratification in the Lower Chesapeake Bay. Detailed analysis was performed on a 14 year data set to study interannual variation in the region of study. Potential energy anomaly was used to quantify stratification. Potential energy anomaly is the amount of energy required to mix a water column. It is determined from the vertical density structure of density. Potential energy anomaly is the departure of potential energy from climate conditions. …

Fine-Tuning Of Mass-Spring Model Properties For Simulating Realistic Soft Body Deformation, Sylva A. Girtelschmid

Computational Modeling & Simulation Engineering Theses & Dissertations

Obtaining a well behaved soft-tissue model is one of the most challenging and important tasks in the development of surgical simulation systems. Achieving both accurate and real-time deformation response from a soft-tissue model becomes more difficult as the complexity of the represented anatomy and the degree of deformation increases. One common approach to modeling deformable objects is the Mass-Spring (MS) system method. Mass-Spring systems are attractive to real-time applications due to their relatively low computational requirement and ease of implementation. However, their parameter determination is typically done manually, which becomes tedious when accurate approximation to real-world objects is desired. This …

The Small Mammals Of Isle Of Wight County, Virginia, As Revealed By Pitfall Trapping, Robert K. Rose

Virginia Journal of Science

In a study conducted in mid-winter, pitfall traps were used to assess the small mammal communities on 14 grids set in open habitats in Isle of Wight County in eastern Virginia. In all, 136 shrews of three species and 103 rodents of five species were trapped. Least shrews (n=110) comprised 46 percent of small mammals and 80 percent of shrews. Eastern harvest mice (n=62) were the most common rodents. Reproduction was detected only in pine voles and southern bog lemmings. The majority of small mammals of the region were trapped during this month-long study.

A Feature Specific Modular Approach For Pose And Illumination Invariant Face Recognition, Praveen Sankaran

Electrical & Computer Engineering Theses & Dissertations

A feature specific modular-PCA (Principal Component Analysis) approach on face images in multiple views for pose and illumination invariant face recognition is presented in this thesis. Principal components are extracted from different sub-modules of the image and are concatenated to make a single signature vector to represent a face region in a particular viewing angle. Additional principal components are extracted horn image regions representing key facial feature and are added as an extension of the signature vector. Feature specific modular-PCA approach is capable of recognizing faces in varying illumination conditions and facial expressions as the modular components represent the local …

Opal: In Vivo Based Preservation Framework For Locating Lost Web Pages, Terry L. Harrison

Computer Science Theses & Dissertations

We present Opal, a framework for interactively locating missing web pages (http status code 404). Opal is an example of "in vivo" preservation: harnessing the collective behavior of web archives, commercial search engines, and research projects for the purpose of preservation. Opal servers learn from their experiences and are able to share their knowledge with other Opal servers using the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH). Using cached copies that can be found on the web, Opal creates lexical signatures which are then used to search for similar versions of the web page. Using the OAI-PMH to facilitate …

Corporal Punishment And Its Relation To Race, Psychological Well-Being, And Parental Relationship, Michelle P. Kravitz

Psychology Theses & Dissertations

Previous research has documented the numerous negative effects associated with corporal punishment (Gershoff, 2002). The present study examined whether experiencing corporal punishment as a child is related to one's perception of the legitimacy of corporal punishment, race, the nature of the parent-child relationship (i.e., biological parent versus step-parent), and psychological well-being. Compared to college students who did not experience corporal punishment during childhood, college students who experienced higher levels of corporal punishment are expected to report that corporal punishment is a more acceptable form of discipline. College students who grew up with a stepfather were expected to be more likely …

Modeling The Effects Of Physical And Biogeochemical Processes On Phytoplankton Species And Carbon Production In The Equatorial Pacific Ocean, Baris Salihoglu

OES Theses and Dissertations

The primary objective of this research is to investigate phytoplankton community response to variations in physical forcing and biological processes in the Cold Tongue region of the equatorial Pacific Ocean at 0°N, 140°W. This research objective was addressed using a one-dimensional multi-component lower trophic level ecosystem model that includes detailed algal physiology, such as spectrally-dependent photosynthetic processes and iron limitation on algal growth. The ecosystem model is forced by a one-year (1992) time series of spectrally-dependent light, temperature, and water column mixing obtained from a Tropical Atmosphere-Ocean (TAO) Array mooring. Autotrophic growth is represented by five algal groups, which have …

Variation In The Fluorescence Of Green Fluorescent Protein In Various Strains Of Escherichia Coli, Paul R. Letellier Jr.

Biological Sciences Theses & Dissertations

Green fluorescent protein (GFP) was first identified in the jellyfish Aequorea victoria and generated interest due to its ability to noninvasively tag and visualize cells, cellular structures, and cellular proteins. Furthermore, the expression of green fluorescent protein in Esherichia coli cells as a tool for reporting gene expression and promotor activity has become important in the understanding of gene regulation. Expression of the gfp gene was found to vary depending on the strain of E. coli possessing the gfp gene. As a result of this fluctuation in fluorescence, gene expression and hence promotor activity may be difficult to detect or …