Digital Commons Network^™

Crayfish Harvesting Practices In The Southern Atchafalaya River Basin: Quantitative And Qualitative Assessment Of Harvester Techniques And Hydrologic Connectivity Influence On Harvesting Strategies, Ivan A. Vargas-Lopez

LSU Master's Theses

Fisheries produce important impacts around the world through the exploitation of a wide range of species. In Louisiana, crayfish is the most emblematic crustacean and supports a multi-million industry based on pond culture and harvest from natural habitats. Although the economic value (USD) of wild-harvested crayfish has decreased from 10% to 3% of total crayfish value from 2013 to 2015, wild harvested crayfish are highly desired by many consumers and have a strong socio-cultural importance in Louisiana and other Gulf of Mexico coastal regions. This project evaluated harvesting practices by: 1) field observation and mapping of harvest sites in southwestern …

Identifying Genome-Wide Immune Gene Variation Underlying Infectious Disease In Wildlife Populations - A Next Generation Sequencing Approach In The Gopher Tortoise, Jean P. Elbers, Mary B. Brown, Sabrina S. Taylor

Faculty Publications

Background: Infectious disease is the single greatest threat to taxa such as amphibians (chytrid fungus), bats (white nose syndrome), Tasmanian devils (devil facial tumor disease), and black-footed ferrets (canine distemper virus, plague). Although understanding the genetic basis to disease susceptibility is important for the long-term persistence of these groups, most research has been limited to major-histocompatibility and Toll-like receptor genes. To better understand the genetic basis of infectious disease susceptibility in a species of conservation concern, we sequenced all known/predicted immune response genes (i.e., the immunomes) in 16 Florida gopher tortoises, Gopherus polyphemus. All tortoises produced antibodies against Mycoplasma agassizii …

A Case Study: The Attitudes Of A Teaching Assistant Of French Toward Instructional Technology, Farida Emelia Ngandu Tshiebue

LSU Doctoral Dissertations

Technology has shaped the personal experiences of Teaching Assistants (TAs) of French at the collegiate level in the United States (US), what they feel about the technology tools that are accessible in their work environment, and how they use these tools in their practice of teaching. Yet, there is limited research on the specific topic of the attitudes of TAs of French toward the instructional technologies that are available to them. This study sought to investigate the attitudes of a singular TA of French at a southern US university toward instructional technology (IT) by exploring the dynamics of IT use …

The Effects Of Tree Plantations And Land Use On Natural Regeneration Of Woody Plants In The Tropics: Diversity, Species Composition, Successional Dynamics, And Functional Traits, John Benjamin Longworth

LSU Doctoral Dissertations

As anthropogenic forests become more common in the tropics, there is a greater need to understand the factors that impact forest succession. I used censuses of woody plants in successional forests to study the effects of prior land use and tree plantations on species composition and richness. First, I tested the hypothesis that communities originating from different land uses were converging in species composition over time. I compared species composition using the Chao-Jaccard similarity index. I observed shifts in the dominant species during the first 30 years of succession, but not convergence of species composition in sites with different land-use …

Biomedical Applications Of Hydrogels And Gumbos, Kelsey Elizabeth Mcneel

LSU Doctoral Dissertations

Sodium deoxycholate (NaDC) is a small bile salt that was used in this dissertation to produce gelation of tris(hydroxymethyl)amino-methane (TRIS) solutions above, below, and near the pKa of NaDC. These solutions respectively yielded a neutral gelator, a charged gelator, and a mixture of each. Impacts of ionic interactions on gel formation were studied in detail and showed that pH can be used to modify many hydrogel properties including sol-gel temperature, crystallinity, and mechanical strength. It was also observed that pH modification of the hydrogels affected nanoparticle formation. Nanoparticles derived from a Group of Uniform Materials Based on Organic Salts (nanoGUMBOS), …

High Bio-Content Polyurethane (Pu) Foam Made From Bio-Polyol And Cellulose Nanocrystals (Cncs) Via Microwave Liquefaction, Xingyan Huang, Cornelis F. De Hoop, Jiulong Xie, Qinglin Wu, Dorin Boldor, Jinqiu Qi

Faculty Publications

In this work, both the bio-polyol and cellulose nanocrystals (CNCs) used to produce high bio-content polyurethane (PU) foams were prepared from microwave liquefaction of rape straw. As high as 40% petro-based polyol was replaced by bio-polyol and the bio-foams containing 40% bio-polyol (PU40) were further reinforced by incorporating 1 to 6% CNCs. GC–MS, 1H NMR and FTIR observations demonstrated that the bio-polyol is a hydroxyl-rich source consisting of C5, C6 sugars and aromatics. The maximum physico-mechanical performance of bio-foam without CNCs was observed from the bio-foam containing 20% bio-polyol. When further increasing bio-polyol content from 20 to 40%, these properties …

Determining Bioindicators For Coastal Tidal Marsh Health Using The Food Web Of Larvae Of The Greenhead Horse Fly (Tabanus Nigrovittatus), Devika Rajeev Bhalerao

LSU Master's Theses

The greenhead horse fly Tabanus nigrovittatus Macquart is native to coastal marshlands from Texas to Nova Scotia. The larvae are apex invertebrate predators and their development is dependent on the food web in the soil. Surveillance of T. nigrovittatus after the 2010 Deepwater Horizon oil spill in the Gulf of Mexico showed population crashes of adults in the coastal marshes of East Louisiana near places where oil made landfall, but not in West Louisiana where the oil did not reach. Sediment collection in 2011 from West and East Louisiana revealed larval population crashes in the Eastern coastal region. We hypothesized …

Carbon Dioxide Fluxes And Plants Interactions Across The Succession Of A Created Brackish Marsh In Southwestern Louisiana, Andy T. Muench

LSU Master's Theses

The purpose of this study was to examine: 1) carbon dioxide (CO₂) fluxes in different plant communities in a created and natural brackish marsh and 2) the role of an early colonizing species, Spartina alterniflora, in facilitating or suppressing a later colonizer and higher marsh species, Spartina patens. CO₂ fluxes were measured in four key successional stages: 1) non-vegetated sediment of a newly created marsh; 2) Spartina alterniflora-dominated areas of a newly created marsh; 3) S. alterniflora-dominated natural marsh; and 4) Spartina patens- dominated natural marsh. Spartina alterniflora-dominated areas were sinks for …

Benefit Of Intensity Modulated Bolus Electron Conformal Therapy For Post Mastectomy Chest Wall Irradiation, John Doiron

LSU Master's Theses

Purpose: The delivery of post-mastectomy radiotherapy (PMRT) with bolus electron conformal therapy (BECT) for patients with left-sided breast cancer can reduce second cancer complication probability (SCCP) compared to modern rotational intensity modulated x-ray (IMXT) techniques such as volumetric modulated arc therapy (VMAT) or Tomotherapy. However, rotational IMXT yields superior levels of dose homogeneity compared to BECT. This study investigates the use of intensity modulated (IM) BECT (IM-BECT) to improve dose homogeneity in the chest wall (CW) region of the PMRT planning target volume (PTV) abutted to parallel opposed IMXT tangents for the remaining PTV for a clinically-representative set of patients, …

An Evaluation Of The Groundwater Microbial Community's Toluene Biogenesis Potential At A Site In Southeast Louisiana, Michael A. Griffin Jr.

LSU Master's Theses

The broad goal of the research described in this thesis was to better understand the potential for biological toluene production to occur in groundwater at a Superfund Site located in southeast Louisiana. Previous literature reported that bacterial isolates under laboratory test conditions and undefined microbial communities in anaerobic sludge digesters and seasonally stratified lakes can produce toluene biogenically. Most of the research reported on this subject previously, however, has been on systems in Europe and little research has been reported previously on such phenomena in North America.

In the research described here, studies were conducted utilizing groundwater from a Superfund …

Nextgen Voices: Research Resolutions, Felicia Olmeta-Schult, Lauren Massa Segal, Sam Tyner, Twila Alexandra Moon, Ryan Dz Wei Chow, Prosanta Chakrabarty, Martin Pacesa, Anna Igorevna Podgornaia, Jennifer Chen, Bipin Singh, Bo Cao, Rishi Raj Singh Sidhu, Bryce W.Q. Tan, Prashant Sood, Stuart Parker, Matthew A. Scult, Desiree Van Haute, Nikos Konstantinides, Beat A. Schwendimann, Sudhakar Srivastava, Raffaele Fiorenza, Ken Dutton-Regester, Rachel Hale, Emre Ozan Polat, Edward Lau, Audrey L. Mayer, Easton R. White

Faculty Publications

No abstract provided.

Metavirome Sequencing Of The Termite Gut Reveals The Presence Of An Unexplored Bacteriophage Community, Chinmay V. Tikhe, Claudia Husseneder

Faculty Publications

The Formosan subterranean termite; Coptotermes formosanus is nutritionally dependent on the complex and diverse community of bacteria and protozoa in their gut. Although, there have been many studies to decipher the taxonomic and functional diversity of bacterial communities in the guts of termites, their bacteriophages remain unstudied. We sequenced the metavirome of the guts of Formosan subterranean termite workers to study the diversity of bacteriophages and other associated viruses. Results showed that the termites harbor a virome in their gut comprised of varied and previously unknown bacteriophages. Between 87-90% of the predicted dsDNA virus genes by Metavir showed similarity to …

Childhood Interrupted: An Autoethnography Of Supporting Learning, Development, And Foster Parenting, Alica Legaye Benton

LSU Doctoral Dissertations

The purpose of this autoethnography is to investigate my adopted child’s literacy skills and the impact an interrupted childhood has on literacy development. Learning to read and write encompasses multiple facets of cognition and aspiration. An autoethnography of multiple interruptions in this child’s formative years while fostering her literacy development will be chronicled, examined, analyzed, and interpreted. This autoethnography focuses on the acquisition of oral language and early reading and writing skills when there is a loss of childhood stability. Data were collected through observations, artifacts, and a reflective journal. Data were analyzed using eclectic coding in order to identify …

Analysis Of Veterinary Drug Residues In Imported And Domestic Crawfish Using Liquid Chromatography—Mass Spectrometry, Emily Kate Wall

LSU Master's Theses

Aquaculture production has greatly increased over the past few decades, and will continue to grow as the world fisheries become overfished and demand for seafood increases. With increased production comes more intense cultivation methods and heavy use of formulated feeds that may contain veterinary drug residues. Currently no antibiotics are allowed in the U.S. for crawfish aquaculture; yet, detectable levels of various antibiotics have been found in imported seafood samples.The FDA is responsible for testing aquaculture products entering the United States, but only has the capabilities to test a minimal amount of those imports. Additionally, for crawfish there is only …

Mitogenomic Divergence Between Three Pairs Of Putative Geminate Fishes From Panama, Fernando Alda, Alexandria J. Adams, Prosanta Chakrabarty, W. Owen Mcmillan

Faculty Publications

© 2018, © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. We sequenced the complete mitochondrial genomes of three pairs of congeneric peripheral fishes distributed on either side of the Isthmus of Panama in order to test their status as geminate species pairs. Our phylogenetic analysis did not support a sister relationship between Gobiomorus dormitor and G. maculatus and therefore they cannot be considered geminates. The average genetic distance of protein-coding genes between Sicydium altum and S. salvini was more than two times larger than between Atlantic and Pacific Awaous banana, suggesting different timings …

In Vivo Inhibition Of Tryptophan Catabolism Reorganizes The Tuberculoma And Augments Immune-Mediated Control Of Mycobacterium Tuberculosis, Uma S. Gautam, Taylor W. Foreman, Allison N. Bucsan, Ashley V. Veatch, Xavier Alvarez, Toidi Adekambi, Nadia A. Golden, Kaylee M. Gentry, Lara A. Doyle-Meyers, Kasi E. Russell-Lodrigue, Peter J. Didier, James L. Blanchard, K. Gus Kousoulas, Andrew A. Lackner, Daniel Kalman, Jyothi Rengarajan, Shabaana A. Khader, Deepak Kaushal, Smriti Mehra

Faculty Publications

Mycobacterium tuberculosis continues to cause devastating levels of mortality due to tuberculosis (TB). The failure to control TB stems from an incomplete understanding of the highly specialized strategies that M. tuberculosis utilizes to modulate host immunity and thereby persist in host lungs. Here, we show that M. tuberculosis induced the expression of indoleamine 2,3-dioxygenase (IDO), an enzyme involved in tryptophan catabolism, in macrophages and in the lungs of animals (mice and macaque) with active disease. In a macaque model of inhalation TB, suppression of IDO activity reduced bacterial burden, pathology, and clinical signs of TB disease, leading to increased host …

Response To The Letter To The Editor On Turner (2017), R. Eugene Turner

Faculty Publications

No abstract provided.

Seasonal Trends In Surface Pco2 And Air-Sea Co2 Fluxes In Apalachicola Bay, Florida, From Viirs Ocean Color, I.D. Joshi, N.D. Ward, E.J. D'Sa, C.L. Osburn, T.S. Bianchi, D. Oviedo-Vargas

Faculty Publications

No abstract provided.

Geomorphic Influences On The Contribution Of Vegetation To Soil C Accumulation And Accretion In Spartina Alterniflora Marshes, Tracy Elsey-Quirk, Viktoria Unger

Faculty Publications

No abstract provided.

Drivers Of Oxygen Consumption In The Northern Gulf Of Mexico Hypoxic Waters—A Stable Carbon Isotope Perspective, H. Wang, X. Hu, N.N. Rabalais, J. Brandes

Faculty Publications

No abstract provided.

Declining Oxygen In The Global Ocean And Coastal Waters, D. Breitburg, L.A. Levin, A. Oschlies, M. Grégoire, F.P. Chavez, D.J. Conley, V. Garçon, D. Gilbert, D. Gutiérrez, K. Isensee, G.S. Jacinto, K.E. Limburg, I. Montes, S.W.A. Naqvi, G.C. Pitcher, N.N. Rabalais, M.R. Roman, K.A. Rose, B.A. Seibel, M. Telszewski, M. Yasuhara, J. Zhang

Faculty Publications

No abstract provided.

Walleye Recruitment Success Is Less Resilient To Warming Water Temperatures In Lakes With Abundant Largemouth Bass Populations, Gretchen J.A. Hansen, Stephen R. Midway, Tyler Wagner

Faculty Publications

Lakes respond heterogeneously to climate, with implications for fisheries management. We analyzed walleye (Sander vitreus) recruitment to age-0 in 359 lakes in Wisconsin, USA, to (i) quantify the relationship between annual water temperature degree days (DD) and walleye recruitment success and (ii) identify the influence of lake characteristics - area, conductivity, largemouth bass (Micropterus salmoides) catch rates, and mean DD - on this relationship. The relationship between walleye recruitment and annual DD varied among lakes and was not distinguishable from zero overall (posterior mean = -0.11, 90% CI = -0.34, 0.15). DD effects on recruitment were negative in 198 lakes …

Impact Of Seabed Resuspension On Oxygen And Nitrogen Dynamics In The Northern Gulf Of Mexico: A Numerical Modeling Study, J.M. Moriarty, C.K. Harris, M.A.M. Friedrichs, K. Fennel, K. Xu

Faculty Publications

No abstract provided.

Modeling The Population Effects Of Hypoxia On Atlantic Croaker (Micropogonias Undulatus) In The Northwestern Gulf Of Mexico: Part 2—Realistic Hypoxia And Eutrophication, Kenneth A. Rose, Sean Creekmore, Dubravko Justić, Peter Thomas, J. Kevin Craig, Rachael Miller Neilan, Lixia Wang, Md Saydur Rahman, David Kidwell

Faculty Publications

Quantifying the population-level effects of hypoxia on coastal fish species has been challenging. In the companion paper (part 1), we described an individual-based population model (IBM) for Atlantic croaker in the northwestern Gulf of Mexico (NWGOM) designed to quantify the long-term population responses to low dissolved oxygen (DO) concentrations during the summer. Here in part 2, we replace the idealized hypoxia conditions with realistic DO concentrations generated from a 3-dimensional water quality model. Three years were used and randomly arranged into a time series based on the historical occurrence of mild, intermediate, and severe hypoxia year types. We also used …

Gumbo Yearbook, Class Of 2018, Louisiana State University And Agricultural And Mechanical College

Gumbo Yearbook

The Gumbo yearbook chronicles the entire academic year at LSU. In words and especially photos, the Gumbo shows the people, places, and events that make each year unique. In addition to formal portraits of schools and departments, the book contains hundreds of snapshots of students with their friends and dozens of pages showcasing organizations.

Lsu General Catalog 2018-2019, Louisiana State University And Agricultural And Mechanical College

LSU General Catalog

The LSU General Catalog describes all undergraduate and graduate departments and programs with degree requirements and courses offered for each one. The LSU General Catalog includes information on registration and financial aid as well as academic services offered to all students.

Contrasting Impacts Of Competition On Ecological And Social Trait Evolution In Songbirds, Jonathan P. Drury, Joseph A. Tobias, Kevin J. Burns, Nicholas A. Mason, Allison J. Shultz, Hélène Morlon

Faculty Publications

© 2018 Drury et al. Competition between closely related species has long been viewed as a powerful selective force that drives trait diversification, thereby generating phenotypic diversity over macroevolutionary timescales. However, although the impact of interspecific competition has been documented in a handful of iconic insular radiations, most previous studies have focused on traits involved in resource use, and few have examined the role of competition across large, continental radiations. Thus, the extent to which broad-scale patterns of phenotypic diversity are shaped by competition remain largely unclear, particularly for social traits. Here, we estimate the effect of competition between interacting …

Challenges Of Elephant Conservation: Insights From Oral Histories Of Colonialism And Landscape In Tsavo, Kenya, Peter Ngugi Kamau, Andrew Sluyter

Faculty Publications

No abstract provided.

A New Ultrasonic Transducer Sample Cell For In Situ Small-Angle Scattering Experiments, Sudipta Gupta, Markus Bleuel, Gerald J. Schneider

Faculty Publications

© 2018 Author(s). Ultrasound irradiation is a commonly used technique for nondestructive diagnostics or targeted destruction. We report on a new versatile sonication device that fits in a variety of standard sample environments for neutron and X-ray scattering instruments. A piezoelectric transducer permits measuring of the time-dependent response of the sample in situ during or after sonication. We use small-angle neutron scattering (SANS) to demonstrate the effect of a time-dependent perturbation on the structure factor of micelles formed from sodium dodecyl sulfate surfactant molecules. We observe a substantial change in the micellar structure during and after exposure to ultrasonic irradiation. …

Maternal Bodies: Redefining Motherhood In Early America, Jennifer L. Gross

Civil War Book Review

In Maternal Bodies, winner of the prestigious Allan Nevins Prize from the Society of American Historians, Nora Doyle explores the tension between women’s lived experiences of motherhood, both physical and emotional, and the cultural representations of motherhood that began to emerge in the second half of the eighteenth century. In terms of women’s experiences of motherhood, Doyle notes significant continuity. For example, despite the fact that the average number of children American women bore and reared did decrease during the period, “childbearing and childrearing continued to define most women’s lives” (2). Another example of continuity during the era was that …