Digital Commons Network^™

Gene Expression Of Anthocyanin Pigments In The California Native Plant Leptosiphon Parviflorus: Interactions Between Flower Color Morphology And Abiotic Stressors, Weston Gonor

Master's Theses

For plants to survive in harsh conditions imposed by abiotic stressors, they must develop mechanisms of adaptation. One of the common types of adaptation seen in plants is the production of anthocyanin pigments, which have been shown to protect plants from UV radiation, metabolic stress, and drought. In this study, we used the flower color polymorphic species Leptosiphon parviflorus to investigate the role of anthocyanin pigments in protecting plants from abiotic stress. To accomplish this, RNA samples were taken from flower, leaf and root tissue of different flower color morphs of Leptosiphon parviflorus (Polemoniaceae) grown in high magnesium and water …

Alpine Plants And Climate Change: Tracking Community Shifts In Yosemite National, Brooke L. Wallasch

Master's Theses

As climate change progresses, alpine plant communities are predicted to shift upslope as they track temperature over time. Relative to lowland environments, alpine areas are experiencing a faster rate of temperature change due to a phenomenon referred to as elevation-dependent warming. A common approach for tracking plant communities shifts over time, is to conduct resurveys of the same area at several time points, as the Global Observational Research Initiative in Alpine Environments (GLORIA) has done on mountain summits around the world since 2001. In 2011-2013, GLORIA developed a supplemental survey method whereby belt transects were established downslope of summits in …

Using Hydraulic Simulations To Determine The Effects Of Tidal Behavior And Riparian Restoration On Chorro Creek, Jonathan L. Maas

Master's Theses

This thesis examines how tidal backwater effects and riparian restoration influence flooding in the Chorro Creek watershed, a major tributary to the Morro Bay Estuary on California’s Central Coast. Restoration efforts, including levee removal, floodplain reconnection, and revegetation have attempted to improve ecological function and reduce sediment transport. However, recent flood events suggest that these changes may also affect local hydraulics in ways not fully anticipated, particularly under the influence of tides and sea level rise. To analyze these dynamics, a two-dimensional HEC-RAS model was developed using LiDAR terrain, historical imagery, and field data collected from pressure and ultrasonic gauges. …

Alpine Plants And Climate Change: Tracking Community Shifts In Yosemite National Park, Brooke Wallasch, Annalise Burrows, Madeleine Colbert, Michael Gottlieb, Ty Connelly, Julian Durante, Emily Staats, Marjorie Say

Baker/Koob Endowments Awarded Projects

As climate change progresses, alpine plant communities are predicted to shift upslope as they track temperature over time. Relative to lowland environments, alpine areas are experiencing a faster rate of temperature change due to a phenomenon referred to as elevation-dependent warming. A common approach for tracking plant communities shifts over time, is to conduct resurveys of the same area at several time points, as the Global Observational Research Initiative in Alpine Environments (GLORIA) has done on mountain summits around the world since 2001. In 2011-2013, GLORIA developed a supplemental survey method whereby belt transects were established downslope of summits in …

Exopg Maturation And Owl Interface, Duncan Michael Louden

Electrical Engineering

The maturation of the ExOPG buoy generator consists of an interface to facilitate remote data acquisition of an existing battery charge controller. This module telemeters battery controller data including voltage, temperature, and state of battery charge. The data is transmitted to a communication system and is able to be viewed by humans on a 24/7 basis for continuous operation and human usage. The module works seamlessly as an addition to the existing ExOPG generator, and it does not interfere with any existing and planned components of the generator. The module is highly efficient and draws minimal power from the existing …

Experimental Study Of Gas-Dynamic Heating In Hartmann-Sprenger Tubes For Rocket Engine Ignition, Jacob T. Huff

Master's Theses

Ignition systems for chemical rocket engines typically rely on hypergolic propellants or auxiliary electrical hardware to supply the energy required to initiate combustion. The resonance igniter is a simple and robust alternative to these conventional methods, capable of inducing autoignition of non-hypergolic propellants without an external ignition source. At the core of this concept is the Hartmann-Sprenger Tube (HST), a device in which a high-velocity jet of gas impinges on a resonance cavity. This interaction establishes self-sustaining gas oscillations within the cavity that heat the propellants to their autoignition temperature. To facilitate the development of a functional resonance igniter at …

Enhancing Non-Player Character Dialogue In Video Gages: An Evaluation Of Large Language Model-Generated Responses, Lam P. Quach

Master's Theses

As video games increasingly emphasize narrative depth and player immersion, the quality of Non-Player Character (NPC) dialogue has become crucial for creating engaging gaming experiences. This thesis investigates the potential of Large Language Models (LLMs) to generate high-quality NPC dialogue by comprehensively evaluating four state-of-the-art models: Gemma 3 27B, Mistral 7B, QWEN 2.5, and LLAMA 3.1. The study employs a mixed-methods approach, combining human evaluation (N=50 participants) with AI-based assessment across five key benchmarks: coherence, personality expression, engagement, style/tone appropriateness, and overall quality. Participants evaluated 32 dialogue samples (8 per model) generated for a fantasy game context featuring two distinct …

Sparse-Data Orbit Estimation In Low Earth Orbit Using The Markov Chain Monte Carlo Ensemble Gaussian Mixture Filter, Nicholas J. Oden

Master's Theses

The number of space objects (SOs) in low Earth orbit (LEO) continues to increase rapidly, creating challenges for the current ground-based tracking network, which cannot accommodate the projected growth in SOs. Catalog maintenance relies on frequent observations for reliable reacquisition, with Two-Line Element (TLE) sets typically generated daily to mitigate rapid error growth from poor TLE accuracy. This constraint limits the ability to track more objects with existing infrastructure. This work evaluates the Markov Chain Monte Carlo Ensemble Gaussian Mixture Filter (MCMC EnGMF), a nonlinear, non-Gaussian filter well-suited for sparse tracking scenarios where higher post-update accuracy is needed to reduce …

Optimizing Object Detection For Remote Monitoring With Owl Ducklink Radios, Colin Ren-Jin Babian

Electrical Engineering

This project develops an AI powered object detection system integrated with OWL DuckLink radios to enable real time remote monitoring. The system benchmarks multiple AI accelerators using a Raspberry Pi 5 to determine their efficiency in low power, long range communication environments. By evaluating the Raspberry Pi 5 CPU (7.62W, 14.5 camera FPS, 3.8 inference FPS), Raspberry Pi AI Camera with Sony IMX500 (6.45W, 30 camera FPS, 9.2 inference FPS), and Raspberry Pi AI Hat with Hailo-8L chipset (7.80W, 30 camera FPS, >30 inference FPS), this project identifies the most effective combination of hardware and software for edge AI applications. …

Restoration Of 6-Axis Industrial-Grade Robotic Arms, Bryce Andrew Paulson, Warren Douglas Howard

Electrical Engineering

The Staubli TX60 and TX60CR are industrial-grade, six-axis robotic arms originally designed to perform complex automation tasks in manufacturing environments. Following their retirement from active industrial use, both units were restored to full operational status. As part of this project, they were reprogrammed to execute a pick-and-place routine using kids shape-sorting toys that mirrors typical workflows found in factory settings. The six degrees of freedom afforded by each robot enable a wide range of motion, making them well-suited for tasks such as material handling, product sorting, and repetitive operations typically carried out by human workers. Each model is equipped with …

Adjoint Enhanced Panel Methods, Christopher Sheehan

Master's Theses

This thesis describes the development, implementation, and validation of an adjoint-enhanced panel method for two-dimensional airfoil analysis. While conventional panel methods are computationally efficient for flow analysis, they typically rely on relatively computationally expensive finite differencing for gradient calculation in design optimization or sensitivity studies, a limitation addressed by employing the discrete adjoint method. The core of this work involves integrating the discrete adjoint method with a Hess-Smith panel code utilizing Class-Shape Transformation (CST) for airfoil parameterization, which requires the analytical derivation of sensitivities for panel geometry, boundary conditions, and the aerodynamic influence matrix with respect to the CST design …

Dietary Intake And Changes In Body Composition Over The Course Of One Season In Ncaa Division 1 Football Players, Blayke W. Harrison

Master's Theses

Energy intake and macronutrient composition of an athlete’s diet is highly important when considering performance. Additionally, having a favorable body composition (i.e. low levels of fat mass and high levels of lean body mass) is crucial in high-level athletes.The role of nutrition-related support personnel is highly needed by many collegiate athletics programs to achieve these outcomes, yet this resource seems to be undervalued and underused in many settings. The present thesis investigates the effects of providing nutritional support to improve dietary habits and compare changes in specific body composition metrics over the course of one season (pre- and post-season) among …

Building A Novel Question-Answering System Using Retrieval-Augmented Generation For The California Fair Political Practices Commission, Saanvi Dua

Master's Theses

The California Fair Political Practices Commission (FPPC) receives a high volume of inquiries via email from public officials, the general public, and other agencies, which currently requires staff to manually search through informational documents and manuals to provide timely responses. This process is both labor- and time-intensive.

To address this challenge, we design a question-answering (QA) system that drafts responses to emailed questions by retrieving relevant information from the FPPC’s manuals using a retrieval-augmented generation (RAG) framework. Although the current implementation focuses on a single manual, the system is designed to be adaptable to the broader set of FPPC documents. …

Enhancing Preparedness: A Genetic Study Of Sar-Cov-2 And Other Microbial Public Health Threats In Wastewater From A College Town, Christian N. Hutchinson

Master's Theses

Problem

The SARS-CoV-2 (COVID-19) pandemic revealed both the systemic vulnerabilities of our healthcare system as well as the importance of timely, localized data for informing public health responses. Traditional testing approaches were essential but often failed to capture the full extent of viral spread, especially in those with mild or asymptomatic conditions that relied on at home testing. This underreporting hindered effective allocation of resources and made developing effective intervention strategies difficult. We also realized the potential for wastewater surveillance to be applied to tracking antimicrobial resistance gene markers. Taken together, this approach should have important implications for improving public …

An Evaluation Of The Relationship Between Beef Cattle Grazing Activity Traits And Conception Methods During The Breeding Season, Jason Dubowsky

Master's Theses

Efficient use of native rangelands and improved reproductive success are primary objectives in beef cattle production. Grazing behavior during the breeding season may be influenced by pasture characteristics, including size and water availability, as well as physiological differences due to reproductive status. This study aimed to evaluate the relationship between grazing activity and conception method in crossbred Angus cows over a 2-year period. The study was conducted during the winter months (December – February) on the Central Coast of California with a mean temperate of 53 degrees Fahrenheit. Cows (n = 76) were blocked by age and then randomly assigned …

Gravitational Torques From Lopsided Young Stellar Component Sustain High Black Hole Accretion Rates In Ngc 4593, N. Winkel, K. Jahnke, J. A. Fernández-Ontiveros, T. A. Davis, F. Combes, M. Gaspari, J. Neumann, M. Singha, J. S. Elford, Vardha N. Bennert, M. A. Malkan

Physics

Context. Supermassive black holes (SMBHs) grow primarily through gas accretion, observed as active galactic nuclei (AGNs). While mergers can drive luminous AGN episodes, secular processes may fuel a substantial portion of cosmic black hole growth. Whether these mechanisms can sustain high black hole accretion rates remains uncertain.

Aims. The aim of this study is to identify the secular mechanism driving high SMBH accretion rates, by targeting a galaxy with a moderately massive SMBH, high central gas densities, accretion rates of a few percent of the Eddington limit, and gas kinematics resolved close to black-hole-dominated scales.

Methods. A blind search led …

Spatially Resolved Kinematics Of Slacs Lens Galaxies. I. Data And Kinematic Classification, Shawn Knabel, Tommaso Treu, Michele Cappellari, Anowar J. Shajib, Chih-Fan Chen, Simon Birrer, Vardha N. Bennert

Physics

We obtain spatially resolved kinematics with the Keck Cosmic Web Imager (KCWI) integral-field spectrograph for a sample of 14 massive (11 < log₁₀(M₍★₎/M☉) < 12) lensing early-type galaxies at z ∼ 0.15–0.35 from the Sloan Lens ACS (SLACS) Survey. We integrate kinematic maps within the galaxy effective radius and examine the rotational and dispersion velocities, showing that 11/14 can be classified as slow rotators. The data set is unprecedented for galaxy-scale strong lenses in terms of signal-to-noise ratio (S/N), sampling, and calibration, vastly superseding previous studies. We find the primary contributions to systematic uncertainties to be the stellar template library and wavelength range of the spectral fit. Systematics …

Marine Heatwaves Detected By A Network Of Buoys Along The Entire Us West Coast Shelf, Gavin Plume, Ryan K. Walter, Piero L.F. Mazzini, Michael Dalsin

Physics

Marine heatwaves (MHWs), prolonged periods of anomalously warm waters, pose an increasing threat to marine ecosystems globally. While satellite-based data offer insights into MHW patterns, coastal upwelling regions are prone to satellite biases and require long-term in-situ datasets for accurate characterization. Using two decades of temperature data from 22 surface buoys distributed along the US West Coast continental shelf (10–50 km offshore) spanning nearly 2000 km of coastline, we investigated, for the first time, coast-wide patterns of MHWs in this valuable region. The spatial extent of MHWs varied from 100% of buoys during the 2014–2016 North Pacific MHW, to less …

Book Review | Tías And Primas: On Knowing And Loving The Women Who Raise Us, Kristian A. Contreras

Feminist Pedagogy

No abstract provided.

Anti-Ableist Teaching: Centering Disabled Perspectives In Collaborative Content-Creation, Suzanne Stolz, Toni Saia

Feminist Pedagogy

Although many service professionals (teachers, paraprofessionals, therapists, counselors) learn that disability inclusion is important, much of what they learn is still rooted in deficit terms. This paper describes why and how a collaboration of disabled scholars uses centering as a strategy in content development for an anti-ableist teaching resource website.

Transformative Pedagogy: Going Beyond An Inclusive Curriculum, Heather Mcnamee

Feminist Pedagogy

This critical commentary argues that approaches toward inclusion in higher education, particularly within curriculum design, are insufficient for creating true systemic change. While efforts to include marginalized voices in humanities curricula indicate some progress, the foundational frameworks continue to center privileged perspectives, relegating marginalized voices to mere additions rather than centralizing them. Drawing on examples from history, social studies, and anti-violence work, this commentary contends that higher education must move beyond inclusion and toward a reimagining of curriculum that critically examines and dismantles the power structures underpinning knowledge production. The commentary emphasizes the need for a curriculum that not only …

Mentoring In The Undergraduate Classroom And Beyond: Creating A Feminist Praxis, Satarupa Dasgupta

Feminist Pedagogy

In the following critical commentary, it is discussed how mentoring--- in the classroom and in academia---can be a feminist practice that comprises an essential part of being a feminist educator. Mentorship encompasses a process in which the mentor disseminates knowledge as well as psychosocial support that are perceived by the mentee as essential for professional or personal development (Sedlacek et al., 2007). Mentorship has been specifically found to fulfill professional needs for women, while enhancing their self-worth and sense of competence, and providing instances of role modeling and social affirmation (Meschitti & Lawton Smith, 2017).

Naming It Out Loud: Mid-Career Malaise, Katherine M. Johnson

Feminist Pedagogy

In this Critical Commentary, the author describes a sense of malaise during mid-career, due to increasing role demands as well as an uncertain educational and social environment. The purpose of this commentary is to offer an opportunity to express how these conditions affect one’s self-concept broadly but also as a feminist teacher. It is also to point out that this is not just a personal issue of 'failing' at one's work, but a broader, structural phenomenon.

De/Colonizing Education Research With Lessons From The Field, K. Kayon Morgan

Feminist Pedagogy

Academia is a reproductive site of settler colonialism (Mayorga et al., 2019) with practices and systems that exclude diverse identities. For universities to become more inclusive spaces, we must dismantle colonialist ideologies. One way is to consider alternative research approaches (Smith, 2021). This paper presents narratives from lessons in the field of research and teaching. The narrative encourages faculty and students to disrupt the status quo and normalize de/colonized research approaches in academia (Bhattacharya, 2021).

Planting Roots: A Pedagogy Of Action, Veronica Rose Popp, Danielle Phillips-Cunningham

Feminist Pedagogy

We discuss how we put feminist pedagogies into action while developing a collaborative research and writing project about Nannie Helen Burroughs (1879-1961). We also explore how our collaborative research project influenced the development of a happy, fruitful, and long-lasting research partnership that broadens the conversation about incorporating feminist teaching practices into higher education. Burroughs set students on ways to find their own pathways, affecting change in ways they found most important. We engaged in our project with similar commitments.

Teaching About Violence Against Women: Reflections On Threshold Concepts, Maddy Coy

Feminist Pedagogy

No abstract provided.

Using Classroom Response Systems For Feminist Pedagogy In Large Classes, Sarah Rainey-Smithback, Nicole Kalaf-Hughes

Feminist Pedagogy

Most practitioners using feminist pedagogy assert small, discussion-based classrooms are best suited for creating power-sharing spaces where students are co-creators of knowledge. While we do not disagree that small classes are well-matched for feminist pedagogy, we challenge the assumption that feminist pedagogy cannot be practiced in large classes. This article explores how Top Hat, a web-enabled classroom response system (CRS), can be used to facilitate feminist pedagogy in a large Introduction to Women’s Studies class. Using data on student perceptions of the CRS, as well as instructor reflections on a technology-centered feminist classroom, this work suggests CRS can be used …

Building An Inclusive Classroom: Digital Humanities (Dh) And Critical Disability Studies (Cds) In The Francophone World, Vidya H. Surti, Kaliane Ung

Feminist Pedagogy

The purpose of this co-authored article by a teacher and student is to contemplate the feminist implications of infusing Critical Disability Studies and Digital Humanities into the traditional humanities classroom. Furthermore, this article implements strategies for inclusive and flexible pedagogy. This article will contribute a case study for an interdisciplinary project of academic rigor, while mitigating student wellbeing through mechanisms of classroom autonomy.

What Is “So Severe, Pervasive, And Objectively Offensive?”: Defining Sexual Harassment, Investigating Reporting Requirements, And Supporting Disclosures With Communicative Role-Playing, Lauren L. Buisker, Kylie Johnson

Feminist Pedagogy

Despite the pervasive reach of rape culture on college campuses, university sexual harassment trainings frequently fail to provide students with clear definitions of sexual violence, often avoid using intersectional frameworks to teach students about the topic, and obscure the bureaucratic complexities that inhibit survivors’ abilities to seek out appropriate resources when they experience sexual trauma. As such, this article outlines communication strategies for feminist instructors interested in improving their students’ understanding of sexual harassment, given that social science and humanities classrooms provide apt spaces for grappling with difficult topics and the way in which language constructs our reality. We propose …

Spatio-Temporal Variability Of San Francisco Bay Plume From Space, Piero L. F. Mazzini, Cassia Pianca, L. Fernando Pareja-Roman, Kelly L. Cole, Ryan K. Walter, Renato M. Castelao, Elias J. Hunter, Robert J. Chant

Physics

As brackish turbid waters exit San Francisco Bay, one of the largest estuaries in the U.S. West Coast, they form the San Francisco Bay Plume (SFBP), which spreads offshore and influences the Gulf of the Farallones (GoF), an ecologically significant region in the California Current System that is also home to three National Marine Sanctuaries. This paper provides the first observationally based investigation of the spatio-temporal variability of the SFBP, using a plume tracking algorithm applied to more than two decades (2002-2023) of ocean color data from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor onboard satellites Aqua and Terra. The …