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Swarming Oscillators With Time-Delayed Interactions, Nicholas S. Blum

Physics

We investigate the role of delay in the collective dynamics of particles that swarm in space and possess an internal oscillatory degree of freedom, called swarmalators. Swarmalators were introduced recently by O’Keeffe, Hong, and Strogatz in Nature Communications 8, 1504 (2017). The addition of a time delay into the system of swarmalators was motivated by the biology of early embryonic development. This delay leads to a rich phenomenology, which includes two new collective states, which we call "semi-static crystal" and "boiling". In the semi-static crystal state, all particles in a cluster undergo decaying radial oscillations completely in phase with one …

Plant Disease Detection Through Convolutional Neural Networks: A Survey Of Existing Literature, Best Practices, And Implementation, Kevin Label

Master's Theses

In the United States alone, common diseases spread among plants account for billions of dollars lost in crop yield each year. This issue is exacerbated in countries with less infrastructure to defend against crop epidemics, and can lead to famine and forced migration. Farmers can seek the help of plant pathology experts to defend against diseases and detect crop irregularities early on. However, access to experts can be difficult, and even those trained in the field may miss symptoms before it is too late. To assist in early disease detection, a number of papers have been released on the potential …

Estimating And Modeling Transpiration Of A Mountain Meadow Encroached By Conifers Using Sap Flow Measurements, Simon Joseph Marks

Master's Theses

Mountain meadows in the western USA are experiencing increased rates of conifer encroachment due to climate change and land management practices. Past research has focused on conifer removal as a meadow restoration strategy, but there has been limited work on conifer transpiration in a pre-restoration state. Meadow restoration by conifer removal has the primary goal of recovering sufficient growing season soil moisture necessary for endemic, herbaceous meadow vegetation. Therefore, conifer water use represents an important hydrologic output toward evaluating the efficacy of this active management approach. This study quantified and evaluated transpiration of encroached conifers in a mountain meadow using …

Effects Of Nitrogen Management And Cultivar On Strawberry Production Under Disease Pressure, Kamille A. Garcia-Brucher

Master's Theses

Effects of nitrogen management and cultivar on strawberry production under disease pressure

Kamille Garcia-Brucher

California strawberry growers face increasing regulatory pressures to manage nitrogen (N) applications in their production system. Standard practice in the California strawberry industry is to apply a synthetic pre-plant controlled release fertilizer (CRF) to ensure the crop has sufficient N during winter establishment. Some research from the UC Cooperative Extension suggests this practice is not efficient at delivering N to the crop since most of the N is released from CRF before strawberry crop N uptake is significant. Another concern for California strawberry growers is loss …

Classifying Electrocardiogram With Machine Learning Techniques, Hillal Jarrar

Master's Theses

Classifying the electrocardiogram is of clinical importance because classification can be used to diagnose patients with cardiac arrhythmias. Many industries utilize machine learning techniques that consist of feature extraction methods followed by Naive- Bayesian classification in order to detect faults within machinery. Machine learning techniques that analyze vibrational machine data in a mechanical application may be used to analyze electrical data in a physiological application. Three of the most common feature extraction methods used to prepare machine vibration data for Naive-Bayesian classification are the Fourier transform, the Hilbert transform, and the Wavelet Packet transform. Each machine learning technique consists of …

Academic Senate - Agenda, 11/9/2021, Academic Senate

Academic Senate Agendas

No abstract provided.

Executive Committee - Agenda, 9/21/2021, Academic Senate

Academic Senate Agendas

No abstract provided.

Bioplastics In The Consumer Market, Elena Strom

Master of Science in Environmental Sciences and Management Projects

The global production and mismanagement of plastic has led to plastics deposited and scatted across marine environments. Conventional plastic, which most Americans encounter every day, is produced from fossil fuels and lacks the ability to fully break down upon disposal, breaking down into microplastics that can remain in the natural environment for hundreds of years. Moving away from petroleum-based plastics could lead to a reduction in greenhouse gas emissions and decrease plastic particles in the ocean. Based on existing literature, there are three biopolymers that could serve as replacements to conventional plastics in the marketplace. These biopolymers are seen as …

Third Trimester Plasma Metabolites Associated With Gestational Diabetes: An Ancillary Analysis Of The Healthy Beginnings Trial, Rodrigo D. Rosario

Master's Theses

Introduction: Gestational Diabetes Mellitus (GDM) results in complications affecting both mother and child. The implementation of metabolomics to assess metabolite alterations is needed to better understand its etiology. Prior research by our lab in first trimester samples of GDM patients indicated altered fatty acid utilization and purine degradation products.

Objective: Metabolomics analysis was conducted on third trimester (28 -35 weeks) plasma samples to observe differences associated with GDM.

Methods: Fifty samples taken from the Healthy Beginnings trial and their corresponding data were included in the study. Plasma samples were analyzed using UPLC-MS with metabolomic assays for primary metabolomics, aminomics, and …

Assessing The Water Quality Of Three Bar-Built Estuaries In The Central Coast Of California, Micaelina Sarmiento Martinez

Master of Science in Environmental Sciences and Management Projects

Estuaries are coastal confluences with innumerable ecosystem services. With the continuous change in land use including the increasing number of people moving to live in coastal areas and on-going agricultural operations, these coastal systems are being adversely impacted. Climate change is also negatively affecting estuaries. Subsequently, this research study assessed the water quality, monthly, at three different locations of three bar-built estuaries in the Central Coast of California. Water quality was evaluated by the change in chlorophyll-a, nitrogen, phosphorus, pH, temperature, dissolved oxygen, and specific conductivity over the course of 19 months. The eutrophication potential and the role of open …

Potential Impact Of Contour Bunds On Diclofenac Removal For Stormwater Control In Rangeland Applications, Braden Alan Whitehead

Master's Theses

Diclofenac (DCF) and other emerging contaminants have been found in environments worldwide. These contaminants may enter the environment due to the application of treated wastewater, biosolids and direct excrement related to veterinary application. Leakage from the soils toward the groundwater is largely controlled by sorption and microbial degradation. Most studies on the environmental fate of DCF have focused on degradation during wastewater treatment processes. However, little is known about their behavior in soil. In this study, the combined effect of adsorption and degradation of diclofenac has been investigated in four (4) 24 ft³ agricultural soil-filled beds designed to mimic …

A Study Of Non-Computing Majors' Growth Mindset, Self-Efficacy And Perceived Cs Relevance In Cs1, Jae Hyuk Yoo

Master's Theses

As the demand for programming skills in today’s job market is rapidly increasing for disciplines outside of computing, CS courses have experienced spikes in enrollment for non-majors. Students in disciplines including art, design and biological sciences are now often required to take introductory CS courses. Previous research has shown the role of growth mindset, self-efficacy and relevance in student success within CS but such metrics are largely unknown for non-majors. In this thesis, we surveyed non-majors in CS1 at Cal Poly, San Luis Obispo during the early and late weeks of the quarter to gain insights on their growth mindset, …

Subnational Map Of Poverty Generated From Remote-Sensing Data In Africa: Using Machine Learning Models And Advanced Regression Methods For Poverty Estimation, Lionel N. Hanke

Master's Theses

According to the 2020 poverty estimates from the World Bank, it is estimated that 9.1% - 9.4% of the global population lived on less than $1.90 per day. It is estimated that the Covid-19 pandemic further aggravated the issue by pushing more than 1% of the global population below the international poverty line of $1.90 per day (WorldBank, 2020). To provide help and formulate effective measures, poverty needs to be located as exact as possible. For this purpose, it was investigated whether regression methods with aggregated remote-sensing data could be used to estimate poverty in Africa. Therefore, five distinct regression …

An Evaluation Of The Central Coast Rangeland Coalition: Trust And Other Factors Important For Collaborative Conservation, Dustin Tran

Master of Science in Environmental Sciences and Management Projects

The proliferation of collaborative partnerships across the western United States and the lack of tools and protocols to evaluate them have been well documented. As the number and types (conservation-based, policy actions, information sharing) of collaboratives rises, there is a need for research that aims to evaluate these partnerships' performance and collaborative process considering their importance and potential to solve complex ecological, economic, and social problems. This study aims to contribute to this pool of research by interviewing the Steering Committee (SC) members of the Central Coast Rangeland Coalition (CCRC), a volunteer-based and information-sharing rangeland collaborative coalition. We evaluate and …

Plastic In Agricultural Soils And Its Biological Impacts, Olivia Mckay

Master of Science in Environmental Sciences and Management Projects

Agricultural plastic mulch reduces weeds, yields higher crop quality and quantity, and increases soil temperature, but it can also become a soil pollutant. The impact of agricultural plastic contamination on soil microbial activity remains poorly documented. To better understand how plastic pollution influences soil microbial decomposers, we sampled three farms in Watsonville, CA. Each site is characterized by large amounts of plastic contamination in the form of polyethylene mulch and polyvinyl chloride dripline. The fields contain marked amounts of macro- (and presumably micro-) plastic fragments primarily derived from PVC dripline and polyethylene mulch. We haphazardly collected 6" deep soil samples …

Soil Disturbance In Sierra Nevada Montane Meadow Following Lodgepole Pine Removal, Nicholas Cary

Master of Science in Environmental Sciences and Management Projects

Climate change and other anthropogenic stressors are driving conifer encroachment into meadow habitat. Encroachment, if ignored, can revert meadows back into dense forested habitat, negating meadow’s ecologic services (Durak et al. 2014). This research attempts to measure soil and stream habitat disturbances in Rock Creek meadow, located with Collins Pine Company land in Plumas County, California after clear-cut removal of encroaching lodgepole pine with mechanical machinery. Soil bulk density, ground cover transect data, and stream habitat conditions were monitored before (July 2019) and after (June 2021) restoration to measure changes in soil compaction, stream temperature, and surface disturbance (rutting/ tracks). …

Subclinical Atherosclerosis Quantified Through Cumulative Shear Measurement, Margaret Lynne Papka

Master's Theses

With the high mortality rate of cardiovascular disease, it is important to study the early signs. The early detection of cardiovascular disease can lead to saved lives. Currently the most prevalent detection methods are the Framingham Risk Score and the carotid intima media thickness, both of which are insufficient. The necessary tool for early detection requires a uniform quantification system. The stimulus leading to endothelial dysfunction, the most significant predictor of a major adverse cardiovascular event (MACE)—and subsequently subclinical atherosclerosis—is reduced shear stress. Increased surface relative roughness affects the flow profile transition from laminar to turbulent resulting in reduced shear …

Multi-Assay Nutritional Metabolomics Profiling Of Low Vitamin A Status Versus Adequacy Is Characterized By Reduced Plasma Lipid Mediators Among Lactating Women In The Philippines: A Pilot Study, Catherine M. Johnson

Master's Theses

Background: A significant portion of lactating women in less developed countries have vitamin A (VA) deficiency. Lactation has substantial effects on a mother’s metabolism and VA is known to be needed in multiple biological processes, including growth, vision, immunity, and reproduction.

Objective: The objective of this pilot study was to utilize metabolomics profiling to conduct a broad, exploratory assessment of differences in plasma metabolites associated with low VA status versus adequacy in lactating women.

Methods: Plasma samples from lactating women who participated in a survey in Samar, Philippines, were selected from a cross-sectional study based on plasma retinol concentrations indicating …

Intercropping And Denisity Impacts In A Lettuce And Chard Agroecosystem, Sophia Moser

Master of Science in Environmental Sciences and Management Projects

Conventional agriculture that uses machinery management, synthetic fertilizers, and pesticides, is a contributor to greenhouse gas emissions, reduction of biodiversity and soil health. Agroecological methods, such as intercropping, have the potential to make farming more sustainable, financially feasible and to be implemented on a large scale. Gaps in agricultural research have led to limited information as to how intercropped arrangements can be adapted to be as productive as conventional systems. This research evaluates the ecological and economic performance of a lettuce and chard agroecosystem, specifically investigating the impact that density and intercropping has on plant productivity and profitability. Both species …

Noninvasive Measurement Of Arterial Compliance With A Blood Pressure Cuff Using A Surrogate Arm Bench Top Model For Oscillometric Use, Shane Wilsey

Master's Theses

A surrogate arm model was created that is capable of being used for oscillometry. This model is capable of being used as a bench top model for blood pressure cuff devices. The arm consists of endplates and internal supports that are 3D printed with ABS, a silicone rubber outer sleeve, and interchangeable arteries made from two silicone rubber strips glued together at the edges. The interchangeable arteries have varying compliances that can be used as different inputs for oscillometric testing. A process was established to measure the artery compliances with a curve fit correlation of 0.95. However, testing revealed that …

Comparison Of Two Advanced Oxidation Processes For Their Production Of Hydroxyl Radicals And Evaluation Of A Uv/Ozone Aop At Varying Uv Fluence For Treating Diclofenac, Alexandra Cass

Master's Theses

This study explores the efficacy of two advanced oxidation processes for generation of hydroxyl radicals to promote degradation of emerging contaminants. Drought and water shortage have become pressing issues caused by our world’s changing climate. Water reclamation and reuse are increasingly important options for relieving this water stress. Water reuse runs the risk of reintroducing recalcitrant compounds that can accumulate in our bodies and environment. Advanced treatment methods that degrade these compounds are vital to protect our health and the health of the environment while providing necessary water resources. Advanced oxidation processes (AOPs) have shown great promise for removing recalcitrant …

The Effects Of Vine Age On Vine Performance, Fruit, And Wine Composition Of Zinfandel In The Templeton Gap Ava, California, Vegas L. Riffle

Master's Theses

A two-year study was conducted at a commercial vineyard in California’s Templeton Gap AVA to evaluate the effect of vine age on viticultural, enological, and sensory attributes of Vitis vinifera L. cv. Zinfandel grapes and wines. The experimental block was dry farmed, conventionally managed, with own-rooted Zinfandel vines that, when determined unproductive, were replaced with new vines of genetically identical scion plant material grafted onto St. George (Vitis rupestris Scheele) rootstock. Treatments included Young vines (5 to 12 years old), Control (representative proportion of young to old vines in the block), and Old vines (40 to 60 years old). …

Analysis Of Dietary Intake, Body Composition And Biomarkers In Adults With Type 2 Diabetes Mellitus, Prediabetes And Without Diabetes, Sarah Thuytrinh Nguyen

Master's Theses

Our study provided an analysis and comparison of specific blood values, dietary intake, body composition, and inflammatory markers (high sensitivity-C-reactive protein (HS-CRP), tumor necrosis factor-alpha (TNF-α), and interleukin-6 (IL-6)) between adults with type 2 diabetes mellitus (T2DM) and prediabetes (PDM) to adults without diabetes. A total of 22 participants (PDM/T2DM n=12, controls n=10) in the San Luis Obispo, CA area completed the study prior to our ending recruitment due to Covid-19. Body composition data were collected through DXA scans. Dietary intake was assessed using a 3-day food record survey and nutritional analysis conducted using ESHA food processing software. In addition, …

Analysis Of The Slo Bay Microbiome From A Network Perspective, Lien Viet Nguyen

Master's Theses

Microorganisms are key players in the ecosystem functioning. In this thesis, we developed a framework to preprocess raw microbiome data, build a correlation network, and analyze co-occurrence patterns between microbes. We then applied this framework to a marine microbiome dataset. The dataset used in this study comes from a year-long time-series to characterize the microbial communities in our coastal waters off the Cal Poly Pier. In analyzing this dataset, we were able to observe and confirm previously discovered patterns of interactions and generate hypotheses about new patterns. The analysis of co-occurrences between prokaryotic and eukaryotic taxa is relatively novel and …

Not So Dystopian: A Historical Reading Of Eugenics In Science Fiction, Riley Sanders

The Forum: Journal of History

Broadly, this paper is an effort in complicating traditional readings of eugenic themes in science fiction. Two landmark novels, Wells’ The Island of Dr. Moreau (1896) and Huxley’s Brave New World (1932), are highlighted as representative of the early and late stages of eugenics. By focusing on the troubling historical context surrounding these authors, I denounce the simple reading of these works as merely “dystopian”. Scholars like Francis Fukuyama advance these simplistic readings by instinctively assuming that Wells and Huxley were against eugenics. This paper continues the tradition that David Bradshaw popularized in his book The Hidden Huxley, which argues …

Netting Nemo: A Moral Ontology For The Scaled And Slimy, Zachary Piso

Between the Species

Here I develop an ontology of aquarium fish that articulates the relationships that many fishkeepers hold with their fish and considers how these relationships generate moral responsibilities. The investigation explores the norms already regulating hobbyist discourse and practice, charting the values that are cited to justify recommendations and restrictions and demonstrating how morally responsible fishkeeping participates in a particular moral ontology. Principally I aim to show that the subject of moral consideration in fishkeeping is rarely the individual fish and only sometimes the fish species, but paradigmatically the “community tank.” In getting fish, one has responsibilities to pair compatible species …

Rapid Warming Events In A Small Coastal Upwelling Embayment, Tatjana E. Ellis

Physics

Temperature variability in the nearshore coastal ocean influences various biological processes and can drive changes in biodiversity and habitat range. Despite recent progress, there are still significant gaps in the understanding of drivers of temperature variability in upwelling bays, particularly at higher frequencies. In this study, we analyzed a decade of nearshore temperature measurements both inside and outside a small coastal embayment located in central California [San Luis Obispo (SLO) bay], as well as temperature data from satellites, to characterize rapid warming events. We found that rapid warming events, defined using rates of temperature change across different thresholds, occurred more …

Spatial And Temporal Variability Of Circulation Patterns Within A Small Coastal Embayment During An Upwelling/Relaxation Cycle, Laurent F. Siroit

Physics

In eastern boundary current systems, wind-driven coastal upwelling is the dominant diver of physical, chemical, and biological variability. Near coastal embayments, complex circulation patterns develop during upwelling forcing, and time-dependent descriptions of these patterns for smaller systems (i.e., width and length scales ≤ 20 km) are limited. In this study, we analyze surface and subsurface current patterns in relation to upwelling wind forcing in San Luis Obispo (SLO) Bay, a small coastal upwelling embayment in central California, to investigate the formation and evolution of an upwelling jet and surface current convergence region during a large upwelling-relaxation event. We found that …

Aged 539 Internship Program, José Vargas

Agricultural Education: Graduate Internship Reports

This internship and project report includes validation documents required in meeting the quality criteria for secondary-level programs of instruction in agriculture. The supporting material includes information to receive state and local funding, outline the goals and objectives of the program, along with an overview of Atwater High School, the agriculture program and the community.

Aged 539 Graduate Internship Report - Delano High School, Ernesto H. Marcial

Agricultural Education: Graduate Internship Reports

This internship and project report includes validation documents required in meeting the quality criteria for secondary-level programs of instruction in agriculture. The supporting material includes information to receive state and local funding, outline the goals and objectives of the program, along with an overview of Delano High School, the agriculture program, and the community.