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An Ethnobotanical Review On Medicinal Plants Of The Lamiaceae Family In Turkey, Selami̇ Selvi̇, Ridvan Polat, Uğur Çakilcioğlu, Ferhat Celep, Tuncay Di̇rmenci̇, Zafer Füsün Ertuğ

Turkish Journal of Botany

Medicinal plants have been used by humans for the treatment of various diseases for thousands of years from past to present. Members of the Lamiaceae family are among the most preferred medicinal plants due to the wide variety of secondary components they contain, particularly essential oils. In this review, Master?s and PhD theses and books based on ethnobotanical studies investigated between 1960 and 2021 as well as internationally recognized databases (PubMed, Scopus, Google Scholar, Web of Science, SciFinder, Springer and Elsevier) were used to determine the medicinal uses of Lamiaceae taxa among the people in Turkey. As a result of …

Ellenberg Ecological Indicator Values, Tolerance Values, Species Niche Models For Soil Nutrient Availability, Salinity, And Ph In Coastal Dune Vegetation Along A Landward Gradient (Euxine, Turkey), Hamdi̇ Güray Kutbay, Burak Sürmen

Turkish Journal of Botany

Coastal dunes are characterised by plant species adapted to harsh conditions. Salinity and other factors (soil pH, nutrients, and climate events) vary along the landward gradient. The current study investigated the effects of environmental factors on the occurrence and composition of coastal dune plants. Ellenberg ecological indicator values (EIVs), species tolerance values (TVs), and species niche models for salinity, nutrient availability, and soil reaction were determined. EIVs were estimated using weighted averages based on the species cover-abundance for each plot. Species TVs were calculated considering the cover-abundance and EIVs (pH, nutrient, and salinity). Species niche models were determined with the …

Morphological And Phylogenetic Studies On Whalleya, With W. Hainanensis Sp. Nov, Yin-Hui Pi, Si-Han Long, You-Peng Wu, Li-Li Liu, Xu Zhang, Qing-De Long, Yan Lin, Ying-Qian Kang, Ji-Chuan Kang, Qi Rui Li

Turkish Journal of Botany

Two species of Whalleya from Guizhou and Hainan Provinces were collected during the investigation of Xylariales from 2019 to 2021. According to morphological and molecular characteristics, Whalleya hainanensis sp. nov. and W. microplaca are introduced. Whalleya hainanensis differs from W. microplaca by its obovoid or tubular perithecia and the slightly raised stromata; and differs from W. maculata by its smaller ascospores. Their detailed morphological descriptions and illustrations are provided. The taxonomic position of Whalleya is discussed.

Rubisco And Abiotic Stresses In Plants: Current Assessment, Abdulbaki Shehu Abdulbaki, Hameed Alsamadany, Yahya Alzahrani, Bolaji Umar Olayinka

Turkish Journal of Botany

Abiotic stresses are serious environmental factors militating against the production of many crops around the world. The consequence of this, is the difficulty of meeting the demands of the increasing world population. Aside from other negative effects, reduction in photosynthesis is an important feature of abiotic stresses. Abiotic stresses limit photosynthesis in a number of ways. The reduction in ribulose 1, 5-bisphosphate carboxylase/oxygenase (Rubisco) content and activity is one of the paramount ways through which abiotic stresses affect photosynthesis. Rubisco is the CO2 fixing enzyme of photosynthesis and also catalyses the photo-respiratory carbon oxidation. The enzyme has low turnover and …

Stachys Istanbulensis (Lamiaceae) A New Species From Turkey: Evidence From Morphological, Micromorphological And Molecular Analysis, Özal Güner

Turkish Journal of Botany

Stachys species show high morphological diversity and their main diagnostic characteristics are calyx and corolla length, ratio of tooth to calyx, and verticillaster arrangement. This manuscript describes and provides detailed morphological, micromorphological and molecular information about a new species, Stachys istanbulensis Ö. Güner, and its close relatives. The new species resembles S. recta complex, but is distinguished by its procumbent flowering stems, shorter calyx and teeth, congested verticillasters, creamy yellow corolla and oblong-obovoid nutlets. Moreover, the periclinal surfaces of S. istanbulensis nutlets are usually wrinkled, while those of S. recta are smooth. In addition, nrITS DNA region sequences were used …

Potential Effects Of Amynthas Agrestis Invasion On Woody Understory Flora In The Cvnp, Christian Mammana

Williams Honors College, Honors Research Projects

Ohio forests are threatened by the invasive ecosystem engineer A. agrestis. A. agrestis invasion typically co-occurs with the ecosystem engineer, Odocoileus virginianus, where their impacts may synergize. To determine the direct effects of A. agrestis invasion, fenced plots across the Cuyahoga Valley National Park that excluded deer were utilized. The species richness, Shannon diversity and evenness of woody understory flora was measured in each plot. Mustard extraction was used to determine earthworm abundance. Correlations between abundance and measured variables were used to highlight potential invasion effects. Abundance and species richness was found to have a significant, positive correlation (p = …

2022 High Tunnel Fresh Market Determinate Tomato Cultivar Trial For Southern Illinois, Bronwyn Aly

Midwest Vegetable Trial Reports

A determinate tomato cultivar trial was conducted at the University of Illinois Dixon Springs Agricultural Center (DSAC) located in southern Illinois (Pope County) during the 2022 growing season. The objective of this trial was to compare performance of thirteen fresh market determinate tomato cultivars in a high tunnel production system.

Role Of Seed Mixes, Biochar Soil Amendment, And The Soil Seed Bank In Improving Palouse Prairie Restoration, Kristine Snyder

EWU Masters Thesis Collection

The Palouse Prairie Ecoregion of Eastern Washington and Idaho is critically endangered. Eastern Washington University (EWU) has begun a ~120 acre campus prairie restoration; however, there is considerable uncertainty about the most effective restoration approach. Annual seeds and soil organic matter are important for succession and soil moisture, but their roles are unknown for Palouse prairie restoration. Additionally, the soil seedbank of the Palouse ecoregion is widely unknown but could provide insight into methods or species to use for restoration. My research aimed to determine the effects of seed mix diversity, annual seed addition, and soil organic matter (as biochar) …

Phenomic And Genetic Controls Of The Drought Stress Response In Sorghum, Melissa A. Lehrer

Graduate Theses, Dissertations, and Problem Reports (ETD)

Drought, one of the most common abiotic stressors, is a result of the precipitation and temperature fluctuations influenced by climate change. As consistent weather patterns are crucial for the maintenance of crop yield, drought threatens food security through its impact on plant growth and development. It is essential to ensure the quality, availability, and affordability of grain-based products in the face of climate change due to expectations of population growth. Therefore, shedding light on the mechanisms associated with drought tolerance is integral to maintaining agricultural production under water-limited conditions. My dissertation work aimed to uncover the morphological, physiological, and genetic …

Megathyrsus Maximus - Environmental Weed Risk Assessment 2022, Department Of Primary Industries And Regional Development, Western Australia

Environmental Weed Risk Assessments

Introducing new plants to an area may have both positive and negative effects on the environment, economy and community. To minimise the negative environmental impact of introducing new agricultural species, DPIRD conducts a risk assessment procedure based on widely accepted scientific standards. This report assesses Panic grass (Megathyrsus maximus). Panic grass (Megathyrsus maximus) is a warm season (C4), perennial grass which is widely used in South America, Japan, India, and sub-tropical Queensland and more recently in the northern agricultural region of Western Australia. It is a productive forage grass for pasture, green-forage, hay and silage. The panic grasses are shade …

An Agronomic-Economic Approach To Connect Manure Nutrients Back To Grain-Producing Regions, Joshua M. Duke, Joshua M. Mcgrath

Plant and Soil Sciences Faculty Publications

Stakeholders for nutrient-impaired watersheds have long discussed the causes and consequences of nutrient surpluses associated with intensive livestock production. Nonetheless, nutrient surpluses relative to crop requirement, particularly with phosphorus (P), persist and continue to contribute to water quality impairment. Nutrient life-cycle analysis shows that mineral P, from soil minerals or mined fertilizer P, flows to livestock regions from grain-producing regions. Although creating a return flow of these nutrients to grain fields seems like an easy solution, significant economic obstacles exist to creating a connected manureshed over large geographic distances. To limit the impact of manure use on local surface water, …

Quantifying Contributions Of Climate, Geography, And Gene Flow To Divergence: A Case Study For Three North American Pines, Constance E. Bolte

Theses and Dissertations

Long-lived species of trees, especially conifers, often display weak patterns of reproductive isolation, but clear patterns of local adaptation and phenotypic divergence. Discovering the evolutionary history of these patterns is paramount to a generalized understanding of speciation and the processes that confer population persistence versus those that compromise adaptive potential under rapidly changing environments. Forest trees have long generation times and low migratory potential making them especially vulnerable to population fragmentation and reductions of genetic diversity due to insufficient tracking of niche optima and adaptational lags. Within clades of the genus Pinus, evolutionary histories appear to be riddled with hybridization …

First Plant Cell Atlas Symposium Report, Selena L. Rice, Elena Lazarus, Christopher Anderton, Kenneth Birnbaum, Jenniofer Brophy, Benjamin Cole, Diane Dickel, David Ehrhardt, Noah Fahlgren, Margaret Frank, Elizabeth Haswell, Shao-Shan Carol Huang, Samuel Leiboff, Marc Libault, Marisa S. Otegui, Nicholas Provart, R. Glen Uhrig, Seung Y. Rhee, The Plant Cell Atlas Consortium

Department of Agronomy and Horticulture: Faculty Publications

The Plant Cell Atlas (PCA) community hosted a virtual symposium on December 9 and 10, 2021 on single cell and spatial omics technologies. The conference gathered almost 500 academic, industry, and government leaders to identify the needs and directions of the PCA community and to explore how establishing a data synthesis center would address these needs and accelerate progress. This report details the presentations and discussions focused on the possibility of a data synthesis center for a PCA and the expected impacts of such a center on advancing science and technology globally. Community discussions focused on topics such as data …

A Non-Destructive Approach For Measuring Rice Panicle-Level Photosynthetic Responses Using 3d-Image Reconstruction, Jaspinder Singh Dharni, Balpreet Kaur Dhatt, Puneet Paul, Tian Gao, Tala Awada, Paul Staswick, Jason Hupp, Hongfeng Yu, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

Our understanding of the physiological response of rice inflorescence (panicle) to environmental stresses is limited by the challenge of accurately determining panicle photosynthetic parameters and their impact on grain yield. This is primarily due to lack of a suitable gas exchange methodology for panicles, as well as non-destructive methods to accurately determine panicle surface area. To address these challenges, we have developed a custom panicle gas exchange cylinder compatible with the LiCor 6800 Infra-red Gas Analyzer. Accurate surface area measurements were determined with a 3D panicle imaging platform to normalize the panicle-level photosynthetic measurements. We observed differential responses in both …

Identification Of Beneficial And Detrimental Bacteria Impacting Sorghum Responses To Drought Using Multi-Scale And Multisystem Microbiome Comparisons, Mingsheng Qi, Jeffrey C. Berry, Kira W. Veley, Lily O'Connor, Omri M. Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina Del Rio, Cody Creech, Peng Liu, Susannah G. Tringe, Jeffery L. Dangl, Daniel P. Schachtman, Rebecca S. Bart

Department of Agronomy and Horticulture: Faculty Publications

Drought is a major abiotic stress limiting agricultural productivity. Previous field-level experiments have demonstrated that drought decreases microbiome diversity in the root and rhizosphere. How these changes ultimately affect plant health remains elusive. Toward this end, we combined reductionist, transitional and ecological approaches, applied to the staple cereal crop sorghum to identify key root-associated microbes that robustly affect drought-stressed plant phenotypes. Fifty-three Arabidopsis-associated bacteria were applied to sorghum seeds and their effect on root growth was monitored. Two Arthrobacter strains caused root growth inhibition (RGI) in Arabidopsis and sorghum. In the context of synthetic communities, Variovorax strains were able to …

Evaluation Of Uav-Derived Multimodal Remote Sensing Data For Biomass Prediction And Drought Tolerance Assessment In Bioenergy Sorghum, Jiating Li, Daniel P. Schachtman, Cody F. Creech, Lin Wang, Yufeng Ge, Yeyin Shi

Department of Agronomy and Horticulture: Faculty Publications

Screening for drought tolerance is critical to ensure high biomass production of bioenergy sorghum in arid or semi-arid environments. The bottleneck in drought tolerance selection is the challenge of accurately predicting biomass for a large number of genotypes. Although biomass prediction by low-altitude remote sensing has been widely investigated on various crops, the performance of the predictions are not consistent, especially when applied in a breeding context with hundreds of genotypes. In some cases, biomass prediction of a large group of genotypes benefited from multimodal remote sensing data; while in other cases, the benefits were not obvious. In this study, …

Gaia Contributions To Agroecology By James Lovelock (1919-2022), Steve Gliessman, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

In writing about the history of agroecology we too often ignore the valuable contributions of British scientist James Lovelock who recently died on his 103rd birthday. A prolific inventor and influential theorist, Lovelock is best known for the Gaia hypothesis first proposed during his innovative work in the 1960s with the United States National Aeronautics and Space Administration. He suggested that ‘the biosphere has a regulatory effect on the Earth’s environment that acts to sustain life’ as written in Gaia: A New Look at Life on Earth (Lovelock 1979). Lovelock further proposed that humans have strongly impacted the planet’s capacity …

Temporal Changes In The Nutrient Content Of Cattle Dung In The Nebraska Sandhills Ecosystem, Amanda Shine, Martha Mamo, Gandura O. Abagandura, Walter Schacht, Jerry Volesky

Department of Agronomy and Horticulture: Faculty Publications

Dung excreted by cattle composes a significant portion of the nutrient inputs in a grazed ecosystem and can have wide-ranging effects on soil properties and vegetation. However, little research has been conducted on the nutrient dynamics of excreted dung in situ that has not been disturbed prior to field sampling. In this study, we analyzed 294 dung pats (1–24 days old) collected from a Nebraska Sandhills meadow to determine water-extractable organic carbon (WEOC), water-extractable nitrogen (WEN), water-extractable phosphorus (WEP), and percent dry matter (DM) changes over time. In addition, we investigated if sample handling - frozen storage – and the …

Predicting Munsell Color For Turfgrass Leaves, William L. Berndt, Roch E. Gaussoin

Department of Agronomy and Horticulture: Faculty Publications

Linking turfgrass color to hue, value, chroma (H V/C) in the Munsell Plant Tissue Color Book is a visual comparison process for specifying and communicating plant color. If subjectivity of visual comparison can be mitigated, then accuracy of color matching may be improved. Research was conducted to develop an algorithm predicting H V/C from CIE-xyY color (xyY) in digital images of leaves of four turfgrasses. First, value-chroma (V/C) arrays for Munsell hue groups 5Y, 2.5GY, 5GY, 7.5GY, 10GY, and 2.5G were converted to xyY. Next, chromaticity (xy) plots from each array were fitted with …

4-Hydroxyphenylpyruvate Dioxygenase (Hppd)-Inhibiting Herbicides: Past, Present, And Future, Amit J. Jhala, Vipan Kumar, Ramawatar Yadav, Prashant Jha, Mithila Jugulam5, Martin M. Williams Ii, Nicholas E. Hausman, Franck E. Dayan, Paul M. Burton, Richard P. Dale, Jason K. Norsworthy

Department of Agronomy and Horticulture: Faculty Publications

The 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibiting herbicides are primarily used for weed control in corn, barley, oat, rice, sorghum, sugarcane, and wheat production fields in the United States. The objectives of this review were to summarize (1) the history of HPPD-inhibitor and their use in the United States, (2) HPPD-inhibitor resistant weeds, their mechanism of resistance, and management, (3) interaction of HPPD-inhibitor with other herbicides, and (4) the future of HPPD-inhibitor-resistant crops. As of 2022, three broadleaf weeds (Palmer amaranth, waterhemp, and wild radish) have evolved resistance to the HPPD-inhibitor. The predominance of metabolic resistance to HPPD-inhibitor was found in aforementioned three …

Limited Irrigation For Managing Declining Water Resources In The Us High Plains, Bijesh Maharjan, Gary Hergert, Saurav Das

Department of Agronomy and Horticulture: Faculty Publications

The US High Plains region has a semiarid climate receiving between 330 and 455 mm of rainfall annually. In the Nebraska Panhandle of the High Plains, 30-year average rainfall is 394 mm, and one-fourth of agriculture is under irrigation. In addition to concerns about water quality, there is a growing concern over water quantity for ground- and surface-water resources that producers use for irrigation. Wisely managing limited water resources for irrigation can help maintain crop productivity and profitability. Deficit irrigation research for 13 years (2005–2017) was conducted in the Nebraska Panhandle to study effects of limited irrigation on maize ( …

Monitoring Environmental Policy Process: Indicators To Evaluate Performance, Stella Namanji, Charles A. Francis, Charles Ssekyewa, Geir Hofgaard Lieblein

Department of Agronomy and Horticulture: Faculty Publications

The complexity of environmental policy development was examined in relation to sustainability, holistic and systems-thinking perspectives. We studied potential application of systems principles of coordination, representation, collaboration, participation and teamwork to improve policy effectiveness at formulation, communication, implementation, and operationalisation of the environment policy in Uganda. The research unveiled the ineffectiveness of the Uganda National Environment Management Policy. We applied systems theory to develop a mechanism for monitoring effectiveness of environmental policies at national level, with the goal to identify key monitoring indicators. We used the soft systems methodology to identify occurring environmental problems causing forest loss. Results suggest that …

Charles A. Francis, Abstracts And Publications [1969--2022], December 2022, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

Contents

I. Journal articles (218), p.1

II. Book reviews (60), p. 18

III. Published abstracts (213), p. 23

IV. Books (23), p. 40

V. Chapters in books (81), p. 42

VI. Symposium or workshop proceedings (127), p. 50

VII. Symposia or extension publications edited (31), p. 62

VIII. Miscellaneous (522), p. 65

Modeling The Evolution Of Herbicide Resistance In Weed Species With A Complex Life Cycle, K. Harrison Holmes, John L. Lindquist, Richard Rebarber, Rodrigo Werle, Melinda K. Yerka, Brigitte Tenhumberg

Brigitte Tenhumberg Papers

A growing number of weed species have evolved resistance to herbicides in recent years, which causes an immense financial burden to farmers. An increasingly popular method of weed control is the adoption of crops that are resistant to specific herbicides, which allows farmers to apply the herbicide during the growing season without harming the crop. If such crops are planted in the presence of closely related weed species, it is possible that resistance genes could transfer from the crop species to feral populations of the wild species via gene flow and become stably introgressed under ongoing selective pressure by the …

Improving Taxonomic Delimitation Of Fungal Species In The Age Of Genomics And Phenomics, Ashley Stengel, Kimberly M. Stanke, Amanda C. Quattrone, Joshua R. Herr

Department of Plant Pathology: Faculty Publications

Species concepts have long provided a source of debate among biologists. These lively debates have been important for reaching consensus on how to communicate across scientific disciplines and for advancing innovative strategies to study evolution, population biology, ecology, natural history, and disease epidemiology. Species concepts are also important for evaluating variability and diversity among communities, understanding biogeographical distributions, and identifying causal agents of disease across animal and plant hosts. While there have been many attempts to address the concept of species in the fungi, there are several concepts that have made taxonomic delimitation especially challenging. In this review we discuss …

Determining The Novel Pathogen Neodothiora Populina As The Causal Agent Of The Aspen Running Canker Disease In Alaska, Loretta M. Winton, Gerard C. Adams, Roger W. Ruess

Department of Plant Pathology: Faculty Publications

Neodothiora populina Crous, G.C. Adams & Winton was determined to be a new pathogen of trembling aspen (Populus tremuloides) growing in Alaska, based on completion of Koch's Postulates in replicated forest and growth chamber inoculation trials. The pathogen is responsible for severe damage and widespread rapid mortality of sapling to mature aspen (≥ 80 years) in the boreal forests of interior Alaska, due to large diffuse annual (1–2 years) cankers. Isolation of the pathogen was challenging, and identification based on cultural characters was difficult. Fruiting bodies were not found on wild diseased trees, but erumpent pycnidia were found …

Changes In Plant Community Composition, Structure, And Function In Response To Permafrost Thaw, Katherine Standen

Theses and Dissertations (Comprehensive)

Air temperature is increasing at three or more times the global average in high latitudes, causing widespread permafrost thaw across the boreal biome. Since the boreal biome stores 30-40% of global terrestrial carbon (C), of which about 30-45% is found in permafrost soils, this temperature increase could cause a large efflux of C to the atmosphere. Climate warming and permafrost thaw are also expected to alter plant community composition and productivity and, given the link between plant functional traits and ecosystem C fluxes, may alter overall ecosystem function. Across the boreal biome of western Canada, we know surprisingly little about …

Determinants Of Population Genetic Structure In Chamaecrista Fasciculata (Michx.) Greene (Fabaceae) In The Southeastern United States, Mahboubeh Hosseinalizadeh Nobarinezhad, Lisa E. Wallace

Biological Sciences Faculty Publications

Chamaecrista fasciculata is a widely distributed, phenotypically variable species in the eastern U.S. Whereas studies have demonstrated genetic structure and local adaptation in northern areas of its distribution, there has been no comparison of genetic variability among populations at the southern extent where phenotypic variation is more complex. We characterized genetic variation at 14 microsatellite loci for populations in Mississippi and Alabama and compared this to variation in a phenotypic trait, leaf pubescence. Geographic distance, climatic variables, and elevation were evaluated as factors to explain the observed patterns of genetic diversity. A significant amount of variation (19%) resided among populations, …

The Challenges Of Growing Orchids From Seeds For Conservation: An Assessment Of Asymbiotic Techniques, Devani Jolman, Martín I. Batalla, Alexis Hungerford, Pryce Norwood, Noah Tait, Lisa E. Wallace

Biological Sciences Faculty Publications

Lewis Knudson first successfully germinated orchid seeds asymbiotically on artificial medium in 1922. While many orchid species have since been grown asymbiotically, the tremendous variation in how species respond to artificial medium and growth conditions ex situ has also become apparent in the past century. In this study, we reviewed published journal articles on asymbiotic orchid seed germination to provide a summary of techniques used and to evaluate if these differ between terrestrial and epiphytic species, to identify areas where additional research is needed, and to evaluate whether asymbiotic germination could be used more often in ex situ conservation. We …

Influence Of Abiotic Drivers On 1-Year Seedling Survival Of Six Mangrove Species In Southeast Asia, Taylor M. Sloey, Kiah Eng Lim, Jared Moore, Jie Min Heng, Jia Min Heng, Michiel Van Breugel

Biological Sciences Faculty Publications

Establishment and survival of plant species in systems with dominant environmental drivers (i.e. factors that exert disproportionate control over species establishment and survival) is often thought to be dominated by one master variable. In forested wetlands such as mangroves, hydrology is typically considered the dominant limiting driver. At the same time, light is a major driver of plant community dynamics, with some of the best understood plant life-history tradeoffs related to fast growth under high-light conditions versus survival under low-light conditions. Yet light is given relatively limited consideration in mangrove research compared to other drivers. Understanding the relative importance of …