Digital Commons Network^™

The Evolving Definition Of Plant Cell Type, Sahand Amini, Jeffrey J. Doyle, Marc Libault

Department of Agronomy and Horticulture: Faculty Publications

In 1665 Robert Hooke, looking at cork through his microscope, discovered that plants are composed of elementary structures he named “cells”. Variation in the expression of a single genome in a complex eukaryotic organism guides the initiation, maturation, physiology, and biochemistry of cells with different shapes and sizes, playing different structural and functional roles in space and time. How many kinds of cells—”cell types”— an organism possesses of course depends on the organism’s cellular complexity, but the plasticity within a cell type fuels the emergence of the concept of cell state (Figure 1). The transition between cell states is driven …

Nutritional Profile And Health Benefits Of Stevia Rebaudiana Bertoni: An Updated Review, Ishrat Fatima, Mubashrah Munir, Sehrish Sadia, Akash Tariq, Rahmatullah Qureshi

Journal of Bioresource Management

Aim of this comprehensive review is to document the up-dated data about pharmaceutical potential of Stevia rebaudiana Bertoni with special focus on its antioxidant activity. A total of 184 research articles were reviewed and five research engines were used to collect the data. The S. rebaudiana (Asteraceae) is indigenous to South America, now cultivated in many countries worldwide to be used as a natural bio-sweetener. Various nutritionally and medically important bioactive compounds such as diterpene glycosides, fatty acids, alkaloids, tannins, saponins, anthraquinones, phenolics, flavonoids, carbohydrates, carotenoids, steroids, polysaccharides and other phytochemicals constitute chemical composition of Stevia. Owing to the …

Shortening Harvest Interval, Reaping Benefits? A Study On Harvest Practices In Oil Palm Smallholder Farming Systems In Indonesia, Rosanne E. De Vos, Lisa Nurfalah, Fatima A. Tenorio, Ya Li Lim, Juan Pablo Monzon, Christopher R. Donough, Hendra Sugianto, Asri A. Dwiyahreni, Nurul L. Winarni, Nadia Mulani, Gilang Ramadhan, Muhammad Ali Imran, Antonius P. Tito, Pandu Sulistiawan, Muhammad Khoirul, Rana Farrasati, Iput Pradiko, Patricio Grassini, Maja Slingerland

Department of Agronomy and Horticulture: Faculty Publications

CONTEXT: Smallholders are responsible for a large share of global palm oil production. Yet, in Indonesia, the main palm oil producing country, smallholders’ yields remain low. Better management practices, including short harvest interval (HI, the number of days between two harvest rounds), could help to raise smallholder yields. However, at present, HI is long in smallholder fields and the drivers underlying this phenomenon are poorly understood.

OBJECTIVE: We explored agronomic, socio-economic, and institutional factors that underlie harvesting practices in independent oil palm smallholder farming systems in Indonesia to assess scope for sustainable intensification through shorter HI and reduced …

Characterization Of Nacl Stress In Young Bismarckia Palm (Bismarckia Nobilis), Muhammad Afzal Naeem, Iqra Hanif, Midrar Ullah, Muhammad Hassaan Khan, Tahmina Nazish

Journal of Bioresource Management

Salinity is a major problem caused by the accretion of excess salts composites in the form of ions like sodium (Na⁺), potassium (K⁺), calcium (Ca²⁺), magnesium (Mg²⁺) and chloride (Cl^-). The possible out-turns of the salinity on the morphology; physiology and biochemical variables of bismarckia palm (Bismarckia nobilis) were investigated in this study. The seedlings of bismarckia palm were grown in pots and periodically irrigated with various concentrations of NaCl solution to assess the various biological variables at the regular intervals. The experiment was performed by following the …

Exotic Herbivores And Fire Energy Drive Standing Herbaceous Biomass But Do Not Alter Compositional Patterns In A Semiarid Savanna Ecosystem, Virginia D. Preiss, Carissa L. Wonkka, Devan A. Mcgranahan, Alexandra G. Lodge, Matthew B. Dickinson, Kathleen L. Kavanagh, Heath D. Starns, Douglas R. Tolleson, Morgan L. Treadwell, Dirac L. Twidwell Jr, William E. Rogers

Department of Agronomy and Horticulture: Faculty Publications

Questions: Fire regime alterations are pushing open ecosystems worldwide past tipping points where alternative steady states characterized by woody dominance prevail. This reduces the frequency and intensity of surface fires, further limiting their effectiveness for controlling cover of woody plants. In addition, grazing pressure (exotic or native grazers) can reinforce woody encroachment by potentially reducing fine-fuel loads. We investigated the effects of different fire energies on the herbaceous plant community, together with mammalian wildlife herbivory (exotic and native combined) exclusion, to inform best management practices.

Location: Texas semi-arid savanna, southern Great Plains, USA.

Methods: We conducted an …

Exome-Based New Allele-Specific Pcr Markers And Transferability For Sodicity Tolerance In Bread Wheat (Triticum Aestivum L.), Roopali Bhoite, Rosemary Smith, Urmil Bansal, Mirza Dowla, Harbans Bariana, Darshan L. Sharma

Grain and Other Field Crops Research Articles

Targeted exome-based genotype by sequencing (t-GBS), a sequencing technology that tags SNPs and haplotypes in gene-rich regions was used in previous genome-wide association studies (GWAS) for sodicity tolerance in bread wheat. Thirty-nine novel SNPs including 18 haplotypes for yield and yield-components were identified. The present study aimed at developing SNP-derived markers by precisely locating new SNPs on ~180 bp allelic sequence of t-GBS, marker validation, and SNP functional characterization based on its exonic location. We identified unknown locations of significant SNPs/haplotypes by aligning allelic sequences on to IWGSC RefSeqv1.0 on respective chromosomes. Eighteen out of the target 39 SNP locations …

Particle Drift Potential Of Mesotrione And Rimsulfuron Plus Thifensulfuron-Methyl Tank Mixture In A Low-Speed Wind Tunnel, Milan Brankov, Guilherme Sousa Alves, Bruno Canella Vieira, Milos Zaric, Greg R. Kruger

West Central Research and Extension Center, North Platte

Particle drift happens during herbicide application when droplets travel outside the intended site. Different nozzles produce various range of droplets, so they play a very important role in coverage and drift occasions. When nozzles produce small droplets, the potential for off-target movement is very high. Another important factor determining particle drift is the distance between crops. Wind velocity gives the energy to herbicide particles to move away from the target place. Therefore, a drift simulation of herbicide (mesotrione and rimsulfuron plus thifensulfuron-methyl mixture) was done in a wind tunnel, using different nozzles Extended Range (XR) and Turbo TeeJet Induction (TTI). …

Effects Of Annual Weather Variation On Peak Herbaceous Yield Date In Sagebrush Steppe, Jonathan Bates, Dustin Johnson, Kirk W. Davies, Tony Svejcar, Stuart Hardegree

Western North American Naturalist

Interannual climate variability impacts forage yield in semiarid rangelands, but it also affects the timing of peak yields. Knowledge of peak standing crop or yield dates would be useful when planning fieldwork for various research or management activities and for developing more accurate models linking herbage production to climatic variables. In this study, herbaceous yield was measured every 2 weeks (April–August) over an 8-year period in a Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis) community in southeastern Oregon. Date of peak yield (Julian day) was calculated for morphological groups (tall perennial bunchgrasses, perennial forbs, annual forbs), Sandberg bluegrass …

Soil Seed Bank Composition And Spatial Distribution In A Cheatgrass (Bromus Tectorum L.)–Dominated Rangeland In Colorado, Usa, Ryan W. R. Schroeder, Jayne L. Jonas, M. Nikki Grant-Hoffman, Mark W. Paschke

Western North American Naturalist

Invasion by nonnative annual plants that form prolific seed banks, including Bromus tectorum L. (cheatgrass), throughout western North America is a major natural resource concern. Even with known economic and ecological implications, soil seed banks and their potential to impact ecological restoration in arid and semiarid ecosystems are poorly understood. Quantifying the regenerative potential of the soil seed bank—the living seeds in the soil profile and on the soil surface—can help natural resource managers make decisions to increase the likelihood of restoration success. We analyzed the germinable soil seed bank composition and distribution of a rangeland site in western Colorado …

Evaluation Of Native Plant Communities On Nebraska Game And Parks Commission State Parks, Robert F. Steinauer

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report evaluates the Native Plant Communities on Nebraska Game and Parks Commission State Parks East Region, also known as Region 3, which includes much of northeast and extreme eastern Nebraska, including portions of the lower Niobrara, Elkhorn and Platte Rivers and nearly the entire east border formed by the Missouri River. Fifteen state-listed threatened and endangered species have been recorded within the boundaries of Region 3 within the last twenty years. Several of these occupy habitats within major river channels.

Surveyed areas which contained habitat for legally protected species include Dead Timber State Recreation Area, Indian Cave State Park, …

How Plants Cope With Stress, Nabila Riaz

Dartmouth College Ph.D Dissertations

Iron (Fe) is one of the essential micronutrients required by both plants and animals. In humans, Fe deficiency causes anemia, the most prevalent nutritional disorder in the world today. Most people rely on plant-based foods as their major Fe source, but plants are a poor source of dietary Fe.

Fe deficiency has many adverse effects on photosynthesis, which is not surprising given that 95% of foliar Fe is found in chloroplast. The Gueirnot lab had previously showed that the bHLH transcription factors ILR3 and PYE are required for photoprotection during Fe deficiency by preventing ROS damage to photosystem II (PSII). …

A Review Of Low-Frequency Latex Harvesting Systems That Lessen The Tapper Shortage Problem Of The Smallholders' Natural Rubber Production, Zar Ni Zaw

Jurnal Kultivasi

Smallholders' rubber production is encountering problems of skilled tapper shortage and high production costs resulting from increased worker wages and the substantial growth of new mature areas. Low-frequency latex harvesting system (LFLHS) effectively improves tapper productivity with long-term optimum yield by reducing the tapper requirement. LFLHS reduces tapper requirement by 33% to 67% of the conventional harvesting systems. Under the d3 (tapping every three days) frequency harvesting system, a tapper is assigned to cover three tasks, and his productivity is at least 30% higher than that of the d2 (alternative daily) frequency harvesting system. The cumulative yield of LFLHS is …

Induction Of Ploidy Level On Three Patchouli (Pogostemon Cablin Benth) Cultivars By Colchicine In Vitro, Suseno Amien, Nikkita Putri Darmawan, Daniya Fathya

Jurnal Kultivasi

Patchouli plants produce essential oils and are used as a raw material and fixative agent for perfumes. The most widely cultivated patchouli plant in Indonesia is Aceh patchouli. Sexual propagation in Aceh patchouli plants is impossible as it does not flower. Genetic diversity can be elevated through another method, such as polyploidy induction using colchicine. This research aimed to evaluate the state-of-the-art application of polyploidization techniques as a breeding tool for callus-based explants. A completely randomized design with a factorial pattern was used in this experiment consisting of two factors, patchouli cultivars (Sidikalang, Tapak Tuan, and Lhokseumawe) and colchicine concentration …

Comparison Between The Electrical Conductivity Method And Radicle Emergence Test As A Rapid Test Of Sorghum Seed Vigor, Nugraheni, Bambang Pujiasmanto, Samanhudi, Amalia Tetrani Sakya

Jurnal Kultivasi

Sorghum (Sorghum bicolor L. Moench) belongs to multipurpose crops. All parts of sorghum can be used both as main products and derivative products; some derivative products produced from the sorghum plant consist of sugar, bioethanol, biomass, handicraft raw materials and starch. This study aims to determine the time required for testing the vigor and viability of sorghum seeds using the electrical conductivity and radicle emergence methods. The study was conducted in two experimental stages using a completely randomized design. The first experiment consisted of two factors: the number of sorghum seeds (40, 70 and 100 grains) and the volume of …

Response Of Four Local Cassava Accessions To Bio-Mulch Application Time, Bayu Suwitono, Muhamad Achmad Chozin, Dwi Guntoro, Suwarto

Jurnal Kultivasi

Cassava (Manihot esculenta Crantz) is widely planted on marginal land with low soil fertility. During the initial growth phase, cassava often loses competition against weeds. Legume cover crops are widely used to increase soil fertility, prevent erosion, and suppress weeds. This study aimed to determine the effect of Arachis pintoi bio-mulch application time on the growth and yield of cassava. This study was conducted using a factorial randomized block design. The first factor was four cassava accessions: Ketan Malang, Genjah Bayam, IR Jonggol, and Mangu. The second factor was six levels of bio-mulch planting time: manual weeding (without bio-mulch applications), …

Effectiveness Of Modified Nitrogen Fertilizer On Soil Chemical Properties And Rice Plant Growth In The Textile Industrial Area, Rija Sudirja, Santi Rosniawaty, Sri Muji Rahayu, Budy Frasetya Taufik Qurrohman

Jurnal Kultivasi

The imbalance of nutrients and heavy metal contamination is a challenge in increasing plant growth surround the textile industry area. This study aimed to determine the effectiveness of the dosage of Biologically Agent N Organo Mineral Fertilizer (Biomix-N) as a fertilizer and an ameliorant in paddy soil contaminated with textile liquid waste. This study used a randomized block design of eight treatments with four replications. Parameters observed were soil chemical properties after application of Biomix-N (Na-ex, total N, EC, Cd, and pH), rice plant growth (plant height and tiller number), Cd concentration in the plant, and relative agronomic effectiveness (RAE). …

A Review Of Sapodilla Beneficial Use, Production Status, And Propagation Technique, Rahmat Budiarto, Syahvan Rifqi Dwinanda, Hansel Arie Pakpahan, Mega Komala, Yusti

Jurnal Kultivasi

Manilkara zapota, commonly known as sapodilla, is one of tropical fruits, originating from Central and South America that is still less popular in Indonesia, as compared to banana, citrus, mango, etc. To gain its popularity, it is crucial to review beneficial uses, existing production status and propagation techniques of sapodilla. In general, sapodilla is used for either table fresh fruit. Additionally, it contains various bioactivities in its fruit, stem, and leaves, such as antioxidant, antimicrobe, and antitumor activity; thus, become very potential for pharmaceutical purposes. The existing production data of sapodilla determine the West Java Province as the biggest production …

Targeted Sequencing Of The Panicum Miliaceum Gene Space And Genotyping Of Variant Sites From Population Genetics Studies, Combined In A Single Assay, As A Tool For Broomcorn Millet Assisted Breeding, Gabriele Magris, Serena Foria, Silvano Ciani, Dipak K. Santra, Ombretta Polenghi, Virna Cerne, Michele Morgante, Gabriele Di Gaspero

Department of Agronomy and Horticulture: Faculty Publications

Broomcorn millet (Panicum miliaceum L.) is a prehistorical cereal, today cultivated as a minor crop with low yields but with a renewed interest for its high water use effciency and gluten-free grains. To reverse the downward trend in broomcorn millet cultivation, the crop needs genetic improvement and creation of novel genetic variation to increase productivity. In order to facilitate genomics-assisted breeding, we designed a reduced representation genome-sequencing assay that investigates 1.8% of the nuclear DNA in a targeted and reproducible way, with an intensity of genomic sampling that is a direct function of local recombination rate. We used this …

Effectiveness Of Arbuscular Mycorrhizal Fungi In Increasing Growth And Yield Of Maize Overlaid On Oil Palm Aged 4 Years, Cucu Suherman, Sri Desi Nurliawati, Mira Ariyanti, Intan Ratna Dewi, Mochamad Arief Soleh

Jurnal Kultivasi

The intercropping system in oil palm plantations is an effort to optimize land, especially at the immature stages (IS), which have a large open space between the trees, so it can be used for cultivating annual crops such as maize. Oil palm trees are generally planted on marginal lands, such as Inceptisol, which generally lacks in phosphor (P). These problems can be reduced by applying arbuscular mycorrhizal fungi (AMF) to elevate P. This experiment was to determine the dosage and effectiveness of AMF that can improve the growth and yield of maize intercropped with a 4-year-old oil palm. The experiment …

The Effects Of Application Of Biochar From Oil Palm Empty Fruit Bunches On Chemical Properties Of Ultisols And The Growth Of Cacao Seedlings, Wulan Kumala Sari, Panji Abdul Malik

Jurnal Kultivasi

It is necessary to redevelop cacao (Theobroma cacao L.) commodity due to the decrease of cacao planting areas in Indonesia since the last decade. One of the ways is by providing a growing medium to produce cacao seedlings with good quality, such as by adding ameliorant i.e., oil palm empty fruit bunch (OPEFB) biochar to marginal soil of Ultisols. This research aimed to study and obtain the best OPEFB biochar dose to improve the chemical properties of Ultisols and the growth of cacao seedlings. This research was conducted in the Experimental Field of the 3rd Campus Andalas University from August …

Indigenous Lakadong Turmeric Of Meghalaya And Its Future Prospects, Manjit Kumar Ray, Dipak K. Santra, Piyush Kumar Mishra, Saurav Das

Department of Agronomy and Horticulture: Faculty Publications

Turmeric (Curcuma longa) has long been used in traditional Indian medicine. India accounts for 80% of total global turmeric production. Lakadong turmeric gets its name from the tiny village of Lakadong, which is located in the foothills of the Jaintia Hills in Meghalaya, India. It is known for having a high curcumin content of more than 7%, as opposed to 2 - 4% in regular varieties. The tribes of this region brought Lakadong turmeric from the forest and domesticated it for medicinal purposes centuries ago. Growth in local coal industries and a gradual decline in the market have …

Vitamin C And Total Soluble Solid Content Of Crystal Guava At Different Storage Duration And Ripeness, Abdul Khafid, Yulita Nurchayati, Endah Dwi Hastuti, Nintya Setiari

Jurnal Kultivasi

Crystal guava (Psidium guajava var. 'Crystal') fruit is in great demand because of its delicious taste and high nutritional content. Storage aims to prevent postharvest damage to the fruit. However, storage that is too long causes morphological damage and decreased nutrients. This study aims to determine the effect of storage duration, fruit ripeness stage and the interaction between both factors on vitamin C and total soluble solids (TSS) content of crystal guava, and determine which treatment can produce the highest vitamin C and TSS. Fruits harvested simultaneously with three levels of ripeness based on the skin color: unripe fruit is …

Characteristics Of The Moringa Mother Tree In The Population Of East Flores, East Nusa Tenggara, Adi Setiadi, Evert Yulianes Hosang

Jurnal Kultivasi

The moringa plant (Moringa oleifera Lam.) is a member of the Moringaceae family that grows in Indonesia. Moringa plants have many benefits, both as a source of food, medicine, and cosmetics. The development of moringa plants in Indonesia has not been carried out because it is still constrained by the absence of a mother tree and a source of moringa seed gardens. This study aims to identify morphological characters and production potential in two populations of moringa plants. The research was conducted in August 2021 in East Flores District, East Nusa Tenggara Province. The research was conducted by determining the …

Scaling Up Of Site Carbon Dynamics To Predict The Carbon Dynamics In Kazakhstan, Central Asia, B. K. Wylie, Tagir Gilmanov, S. L. Stensaas, N. Z. Saliendra, D. A. Johnson, K. Akshalov, S. B. Frank, L. Zhang, R. F. Doyle, E. A. Laca, Montague W. Demment

IGC Proceedings (1977-2023)

Climate and management determine whether rangelands are net carbon sources or carbon sinks. Regional carbon dynamics of the Kazakh Steppe has not previously been documented. The objective of this study is to quantify the regional carbon flux dynamics of these extensive steppes.

A New System For Plant Experiments On Biodiversity Or Multi-Species Competition, John Connolly, L. Kirwan

IGC Proceedings (1977-2023)

Considerable discussion in recent years has focused on the design of competition and biodiversity experiments (Connolly et al., 2001a; Allison, 1999). Few agronomic experiments with >2 plant species have been conducted in greenhouse conditions (Gibson et al, 1999) or in the field (Connolly et al., 2001b). In many experiments the effects of density and initial species size have been confounded. The effects of species richness and evenness also are confounded frequently. The proposed system provides a framework of design and analysis, in which to address questions of function at community level and of structure and competition at …

Native Grasses Seeded Into A Cool-Season Pasture Encouraged By Low Resource Availability, J. E. Doll, R. L. Cates, R. D. Jackson

IGC Proceedings (1977-2023)

Native prairie of the Upper Midwest, which was dominated by warm-season (C₄) grasses, now exists as relatively small relict and restored patches (Curtis 1959). Re-introduction of natives into grazed agroecosystems would promote genetic, species, and landscape diversity. Extensive re-introduction of C₄ grasses will require a shift away from the paradigm of maximizing production because C₄ grasses have higher C:N ratios than C₃ grasses rendering them inferior forage species. Nonetheless, there is great interest amongst the grazing community of the Upper Midwest in establishing native grasses as a means of improving wildlife habitat and increasing belowground …

The Ag-Biota Project: A Preliminary Assessment Of Potential Indicators Of Biodiversity In Agricultural Grasslands, Gordon Purvis, A. Anderson, A. J. Helden, L. Kirwan

IGC Proceedings (1977-2023)

In compliance with European commitments to the Convention on Biological Diversity, the conservation and enhancement of biodiversity within agricultural land is a primary objective of current agri-environmental measures. However, there is a widespread lack of information concerning the effectiveness of agri-environmental schemes in Europe, (Kleijn & Sutherland, 2003). In large part, this is due to uncertainties about selection of appropriate biological indicators of biodiversity (Buchs, 2003; Duelli & Obrist, 2003).

Effects Of Plant Species Diversity In Multifunctional Grasslands On Avian Communities, K. K. Bakker, K. F. Higgins

IGC Proceedings (1977-2023)

Grasslands, planted or native sod, can provide multiple simultaneous functions (e.g., hay-forage production, biomass fuel products, bird nesting cover, soil and water conservation). Bird use of and abundance in grasslands is dependent on vegetation structure, size, and surrounding landscape (Bakker et al., 2002) but little is known about avian relationships to plant species diversity. We evaluated the relationship between plant species diversity and avian community structure in 5 grassland types. The results have application to grazing, haying, burning, and conservation practices applied to native and sown grassland stands and to conservation strategies for declining grassland bird populations.

Diversity And Adaptation Of Perennial Plants From North Africa: Legumes And Grasses, Aissa Abdelguerfi, M. Laouar, K. Abbas, M. M'Hammedi Bouzina

IGC Proceedings (1977-2023)

A variety of climates, soil types and reliefs characterise North Africa (Algeria, Morocco, and Tunisia). These natural conditions have produced a large diversity of environments, landscapes, plant formations and flora. Several factors have contributed to the spread of a wide floristic variety: the influence of the Mediterranean in the north and in the north-east, the Atlantic in the west, and the Sahara in the south, as well as the presence of mountain ranges, particularly the Rif, the Tell Atlas, the Sahara Atlas, the Middle Atlas, the High Atlas, and the Anti-Atlas. This diversity of landscapes, environments and ecosystems has generated …

Comparison Of Compositional Changes In Multi-Species Grass/Legume Mixture Experiments Across Three Nordic Countries (Iceland, Sweden And Finland) Over Two Years, Caroline Brophy, Anne-Maj Gustavsson, A. Helgadottir, Oiva Nissinen, J. Connolly

IGC Proceedings (1977-2023)

A multi-site experiment was established at 39 sites across Europe, Australia and Canada within COST Action 852 to: (1) assess the benefits of grass/legume mixtures over monocultures, (2) test the stability of mixtures and (3) evaluate the consistency of the observed patterns over broad environmental gradients. This paper compares the results from 3 Nordic sites using the same plant species: Korpa Experimental Station in Iceland, Lapland Research Station in Finland and Piteå in Sweden to investigate if compositional changes in mixtures are consistent across the sites.