Digital Commons Network^™

The Malagasy Endemic Dendroportulaca (Portulacaceae) Is Referable To Deeringia (Amaranthaceae): Molecular And Morphological Evidence [Abstract], Wendy L. Applequist, Donald B. Pratt

Faculty Publications

No abstract provided.

Intsormil 2005 Annual Report, John M. Yohe, Kimberly Christiansen, Joan Frederick

INTSORMIL Impacts and Bulletins

The 2005 INTSORMIL Annual Report presents the progress and notable achievements by the SorghumiMillet CRSP during the period of July 1, 2004 - June 30, 2005. These results are an outcome of partnerships between scientists at six U.S. Land Grant Universities (Kansas State University, Mississippi State University, University of Nebraska, Purdue University, Texas A&M University and West Texas A&M University) and scientists of the Agricultural Research Service of the U.S. Department of Agriculture at Tifton, Georgia and National Agricultural Research Systems (NARS) and National Universities in nineteen countries in Central America, West Africa, East Africa and Southern Afflca.

Agricultural research …

Strawberries, Larry A. Sagers

All Archived Publications

No abstract provided.

Shade Tree Insect And Mite Pests, Larry A. Sagers

All Archived Publications

No abstract provided.

The Relationship Between Community Diversity And Exotic Plants: Cause Or Consequence Of Invasion?, Scott Meiners, Mary Cadenasso

Faculty Research & Creative Activity

Invasion ecology has suffered from the artificial separation of invasibility and impact processes in understanding the ationship between diversity and plant invasion. By studying these independently functioning stages of invasion in concert, we can gain great insight into the biological causes and consequences of invasions, and develop crucial information for the generation of adequate management strategies. Our conceptual framework provides a structure to synthesize the current body of research, suggests research needed to fill the gaps in understanding and to organize results from future research. The framework is a powerful tool to guide ecological understanding of the relationship between invasion …

Big Sagebrush Response To One-Way And Two-Way Chaining In Southeastern Utah, John A. Fairchild, James N. Davis, Jack D. Brotherson, Usda Forest Service

All U.S. Government Documents (Utah Regional Depository)

A decadent, mixed stand of Wyoming big sagebrush, Artemisia tridentata wyomingensis, and mountain big sagebrush, Artemisia tridentata vaseyana, located north of Cisco, Utah, was subjected to one-way and two-way chaining treatments in November 1987. The effect of the treatments on plant community characteristics and shrub vigor was documented over a 3-year period. Stand density was reduced 60 percent on sites chained two ways and 43 percent on sites chained over once. Shrubs on one-way chained sites produced more leader growth in 1989 and 1990 than those on untreated sites or sites chained two ways. Browse production on one-way chained sites …

Cooperation And Coordination Are Invasive Species: Important For Effective Management Of Invasive Weeds, U.S. Government Accountability Office

All U.S. Government Documents (Utah Regional Depository)

Invasive weeds, native or nonnative plant species, cause harm to natural areas such as rangelands or wildlife habitat and economic impacts due to lost productivity of these areas. While the federal investment in combating invasive species is substantial most has been concentrated on agricultural lands, not on natural areas. In this report, GAO describes (1) the entities that address invasive weeds in natural areas and the funding sources they use; (2) federal, state, and local weed management officials’ views on the barriers to weed management; and (3) their opinions about how additional resources for weed management could be distributed. GAO …

Turf Grass Management, Larry A. Sagers

All Archived Publications

No abstract provided.

Plant Ontology (Po): A Controlled Vocabulary Of Plant Structures And Growth Stages, Pankaj Jaiswal, Shulamit Avraham, Katica Ilic, Elizabeth Kellogg, Susan Mccouch, Anuradha Pujar, Leonore Reiser, Seung Rhee, Martin Sachs, Mary Schaeffer, Lincoln Stein, Peter Stevens, Leszek Vincent, Doreen Ware, Felipe Zapata

Biology Department Faculty Works

The Plant Ontology Consortium (POC) (www.plantontology.org) is a collaborative effort among several plant databases and experts in plant systematics, botany and genomics. A primary goal of the POC is to develop simple yet robust and extensible controlled vocabularies that accurately reflect the biology of plant structures and developmental stages. These provide a network of vocabularies linked by relationships (ontology) to facilitate queries that cut across datasets within a database or between multiple databases. The current version of the ontology integrates diverse vocabularies used to describe Arabidopsis, maize and rice (Oryza sp.) anatomy, morphology and growth stages. Using the ontology browser, …

Visualizing Food And Farm, 2005 Joint Meetings Of The Agriculture, Food, And Human Values Society (Afhvs) And Association For The Study Of Food And Society (Asfs): Program And Abstracts, Jane Adams, Lorna Michael Butler, Richard P. Haynes, Laura B. Delind

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

Visualizing Food and Farm

2005 Joint Meetings of the Agriculture, Food, and Human Values Society (AFHVS) and Association for the Study of Food and Society (ASFS)

Program and Abstracts

June 9-12, 2005, Portland, Oregon, United States

The Hrpk Operon Of Pseudomonas Syringae Pv. Tomato Dc3000 Encodes Two Proteins Secreted By The Type Iii (Hrp) Protein Secretion System: Hopb1 And Hrpk, A Putative Type Iii Translocator, Tanja Petnicki-Ocwieja, Karin V. Van Dijk, James R. Alfano

Center for Plant Science Innovation: Faculty Publications

Pseudomonas syringae is a gram-negative bacterial plant pathogen that is dependent on a type III protein secretion system (TTSS) and the effector proteins it translocates into plant cells for pathogenicity. The P. syringae TTSS is encoded by hrp-hrc genes that reside in a central region of a pathogenicity island (Pai). Flanking one side of this Pai is the exchangeable effector locus (EEL). We characterized the transcriptional expression of the open reading frames (ORFs) within the EEL of P. syringae pv. tomato DC3000. One of these ORFs, PSPTO1406 (hopB1) is expressed in the same transcriptional unit as hrpK. …

An Inventory Of Rangelands In Part Of The Broome Shire, Western Australia, W E. Cotching

Technical Bulletins

The inventory of rangelands in part of the Broome Shire in Western Australia was undertaken by DAFWA between 1989 and 1990. It describes and maps the natural resources of the region’s pastoral leasehold land. This survey report provides a baseline record of the existence and condition of the natural area’s resources, to assist with the planning and implementation of land management practices. The report identified and described the condition of soils, landforms, vegetation, habitat, ecosystems, and declared plants and animals. It also assessed the impact of pastoralism and made land management recommendations. The survey of part of the Broome Shire …

Protocols For Nationally Coordinated Laboratory And Field Research On Manure Nitrogen Mineralization, C. W. Honeycutt, T. S. Griffin, Brian J. Wienhold, Bahman Eghball, S. L. Albrecht, J. M. Powell, B. L. Woodbury, K. R. Sistani, R. K. Hubbard, H. A. Torbert, R. A. Eigenberg, R. J. Wright, M. D. Jawson

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The National Program structure of USDA-ARS provides an opportunity to coordinate research on problems of national and global significance. A team of USDA-ARS scientists is conducting nationally coordinated research to develop predictions of manure N availability to protect water quality and improve farm solvency. Experimental design and research protocols were developed and used in common across all participating locations. Laboratory incubations are conducted at each location with a minimum of three soils, three temperatures, two wetting/drying regimes, and two manure treatments. A soil from the central United States (Catlin silt loam, fine-silty, mixed, superactive, mesic Oxyaquic Argiudoll) is used as …

Biocontrol Agents Applied Individually And In Combination For Suppression Of Soilborne Diseases Of Cucumber, Daniel P. Roberts, Scott M. Lohrke, Susan L. F. Meyer, Jeffry S. Buyer, John H. Bowers, C. Jacyn Baker, Wei Li, Jorge T. De Souza, Jack A. Lewis, Soohee Chung

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The soilborne pathogens Rhizoctonia solani, Pythium ultimum, and Meloidogyne incognita can cause severe economic losses to field- and greenhouse-grown cucumber. A collection of bacterial isolates and isolates GL3 and GL21 of Trichoderma virens were screened for suppression of diseases caused by these pathogens. T. virens isolates GL3 and GL21 provided the most effective suppression of damping-off caused by R. solani in greenhouse bioassays. Burkholderia ambifaria BC-F, B. cepacia BC-1, and Serratia marcescens N1-14 also provided significant suppression of R. solani relative to the pathogen check in some experiments. T. virens isolates GL3 and GL21 and S. marcescens isolates …

Risk And Ethics In Biological Control, Ernest S. Delfosse

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

All introduced natural enemies present a degree of risk to nontarget species. Since most biological control programs use relatively host-specific natural enemies, the risk to nontarget species is generally very low, particularly from biological control of weeds, which uses extensively tested and validated host-specificity testing procedures to predict risk. However, many of the published comments about risks of biological control are superficial or misleading, often inappropriately lumping risk from all taxa of agents as “the risk of biological control,” and ignore the potential benefits, rather than dealing with species-by-species risk and benefits. Particularly confounding accurate predictions is the common mixing …

Reproductive Ecology Of Two Common Woody Species, Juniperus Sabina And Artemisia Santolinifolia, In Mountain Steppes Of Southern Mongolia, Katrin Ronnenberg

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The present study describes the reproductive ecology of the prostrate shrub Juniperus sabina and the dwarf shrub Artemisia santolinifolia in dry mountain steppes of southern Mongolia. Whereas stands of the juniper are located at the drought limit of the genus’ distributional range, the genus Artemisia is typical of central Asian drylands. Both species produce large numbers of reproductive organs. For Juniperus sabina, however, only 2.5% of the morphologically intact seeds were found to be viable. Correspondingly, neither seedlings nor saplings were found in the field, and recruitment by reseeding happens at most rarely under the present climatic conditions.

Instead, …

Environmental Adaptations Of The Gobi Desert Plants In Mongolia: An Example Of C4-Plants, Ts. Tsendeekhuu, Clanton Candler Black

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

This paper presents the results of our studies on the ecological adaptations and geographical distribution of plants with C4-photosynthesis in Mongolia using ¹³C isotope discrimination.

Previous studies identified about 80 C4-species in 8 families in the Mongolian flora. Our investigations lead to the identification of four additional species, which can be regarded as C4-plants. Orostachys spinosa (-16.26‰ ¹³C), O. thyrsiflora (-16.86‰ ¹³C), O. fimbriata (-16.15‰ ¹³C), and Euphorbia humifusa (-23.29‰ ¹³C). However, as the discrimination level for Euphorbia humifusa is very similar to that of C3-plants it may be switching between C3 and C4 types …

Flora Of The Gurvan Saykhan Mountains, Tseden Jamsran, Batlai Oyuntsetseg, Radnaakhand Tungalag

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Although two major books have been published on the Mongolian flora regional data are often still lacking due to the vast expanses of the country. Therefore we used published information and data from our own fieldwork to compile a relatively comprehensive inventory of the flora of the Gobi Gurvan Saykhan mountains in southern Mongolia.

First Record Of An Adult Male Evening Bat From Kansas, Clay R. Davis, Justin G. Boyles

The Prairie Naturalist

The evening bat (Nycticeius humeralis) occurs throughout the eastern and southeastern United States and into extreme northeastern Mexico, approximately 42° to 18° N latitude (Watkins and Shump 1981). Although records of females are common, records of adult male evening bats are rare in the northern portion of the species range (Watkins 1969, Watkins 1972). Jones et al. (1967) suggested that adult males might not accompany females to at least some parts of the parturient range. As part of a larger study (Davis 2003) we surveyed bats on Fort Leavenworth Military Reservation (FLMR), Leavenworth County, Kansas in July 2002 …

Science-Based Organic Farming 2005: Toward Local And Secure Food Systems, Charles A. Francis, Twyla Hansen, Peter Skelton

Publications from the Center for Applied Rural Innovation (CARI)

Organic farming includes growing food and fiber — animals, agronomic crops, horticultural fruits and vegetables, related products — as one dynamic and rapidly evolving component of our complex U.S. food system. Even as more farmers are moving toward organic certification and participation in an environmentally sound and economically lucrative market, questions arise about the long-term social impacts and sustainability of a set of practices that has gone from a movement to an industry. Consolidations in the organic trade have brought multinational corporations to the table, as they have observed a grassroots activity that has grown by 20% per year for …

The Structure Of A T=169d Algal Virus, Pbcv-1, At 15Å Resolution, X. Yan, V. Bowman, N. H. Olson, James Gurnon, James L. Van Etten, Michael G. Rossmann, T. S. Baker

James Van Etten Publications

Paramecium bursaria chlorella virus 1 (PBCV-1) (genus Chlorovirus, family Phycodnaviridae), infects certain unicellular, exsymbiotic, chlorella-like green algae [1]. The PBCV-1 virion (~1x109 Da) has a linear dsDNA genome (330kbp) and contains at least 100 different proteins [1, unpublished data]. A published cryo-electron microscopy and three-dimensional (3D) image reconstruction of PBCV-1 (26Å resolution) revealed that the outer icosahedral glycoprotein capsid, with a maximum diameter of 1,900Å along the five-fold axis, consists of 1680 trimeric capsomers (trimer) and 12 pentameric capsomers (pentamer) [2]. These capsomers are arranged on a T=169d (h=7, k=8) quasi-equivalent lattice. The trimers and pentamers are organized into 20 …

Functional Implication Of The Trna Genes Encoded In The Chlorella Virus Pbcv-L Genome, Da Young Lee, Michael V. Graves, James L. Van Etten, Tae-Jin Choi

James Van Etten Publications

The prototype Chlorella virus PBCV-l encodes 11 tRNA genes and over 350 protein-encoding genes in its 330 kbp genome. Initial attempts to overexpress the recombinant A189/192R protein, a putative virus attachment protein, in E. coli strain BL21(DE3) SI were unsuccessful, and multiple protein bands were detected on Western blots. However, the full-length A189/192R recombinant protein or fragments derived from it were detected when they were expressed in E. coli BL21 CodonPlus (DE3) RIL, which contains extra tRNAs. Codon usage analysis of the a1891192r gene showed highly biased usage of the AGA and AUA codons compared to genes encoded by E. …

Variation In Isoprene Emission From Quercus Rubra: Sources, Causes, And Consequences For Estimating Fluxes, Jennifer L. Funk, Clive G. Jones, Dennis W. Gray, Heather L. Throop, Laura A. Hyatt, Manuel T. Lerdau

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Isoprene is the dominant volatile organic compound produced in many forest systems. Uncertainty in estimates of leaf level isoprene emission rate stems from an insufficient understanding of the patterns and processes controlling isoprene emission capacity in plant leaves. Previous studies suggest that variation in isoprene emission capacity is substantial; however, it is not known at what scale emission capacity is the most variable. Identifying the sources of variation in emission capacity has implications for conducting measurements and for model development, which will ultimately improve emission estimates and models of tropospheric chemistry. In addition, understanding the sources of variation will help …

Review Of "Photosynthesis - Regulation Under Varying Light Regimes", Jennifer L. Funk

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

This is a review of "Photosynthesis: Regulation Under Varying Light Regimes." By V S Rama Das. Enfield (New Hampshire): Science Publishers. $65.00. viii + 175 p; ill.; author and subject indexes. ISBN: 1-57808-343-5. 2004.

Seasonal Acceptance Of Fourwing Saltbush By Sheep When Crested Wheatgrass Is The Alternative, Christine W. Royer, R. D. Horrocks, Val J. Anderson, Stephen B. Monsen

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Many sagebrush-grass ranges have been seeded to crested wheatgrass [Agropyron desertorum (Fischer ex Link) Shultes]. These ranges are generally nutritionally inadequate for sheep (Ovis aries L.), except for short grazing periods in the spring and fall. To increase production and diversity, particularly crude protein for late-season grazing, fourwing saltbush [Atriplex canescens (Pursch.) Nutt.] was planted in an existing stand of crested wheatgrass. Quantification of sheep forage preferences on these improved ranges aids in determining the length of the grazing season and the extent to which shrubs provide the supplemental nutrition required. This seasonal grazing study was conducted …

Herbivory Alters Resource Allocation And Compensation In The Invasive Tree Melaleuca Quinquenervia, P. D. Pratt, M. B. Rayamajhi, T. K. Van, T. D. Center, P. W. Tipping

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The Australian native Melaleuca quinquenervia is highly invasive in the Florida Everglades, U.S.A., where it experiences limited competition or herbivory from native species, making it a likely candidate for compensation. The introduced biological control agent Oxyops vitiosa feeds exclusively on the seasonal flushes of developing foliage at branch apices, which represents ~ 15% of the total foliar biomass.

Plant Functional Group Diversity As A Mechanism For Invasion Resistance, Monica L. Pokorny, Roger L. Sheley, Catherine A. Zabinski, Richard E. Engel, Tony J. Svejcar, John J. Borkowski

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

A commonly cited mechanism for invasion resistance is more complete resource use by diverse plant assemblages with maximum niche complementarity. We investigated the invasion resistance of several plant functional groups against the nonindigenous forb Spotted knapweed (Centaurea maculosa). The study consisted of a factorial combination of seven functional group removals (groups singularly or in combination) and two C. maculosa treatments (addition vs. no addition) applied in a randomized complete block design replicated four times at each of two sites.

Phosphorus Dynamics In Broiler Litter-Amended Soils, A. Adeli, K. R. Sistani, M. F. Bal'a, D. E. Rowe

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Because land application of broiler litter is commonly made in the spring before cropping season and in the fall, it is essential to understand how environmental variations, such as temperature, affect the phosphorus (P) dynamics. A laboratory incubation study was conducted at Waste Management and Forage Research Unit, USDAARS with the objective of determining the effects of temperature and soil properties on water-soluble P (WSP), Mehlich 3 P, and P fractions in broiler litter-amended soils. Broiler litter was mixed with three soils (Leeper silty clay, Grenada silt loam, and Ruston sandy loam) at the rate of 10 Mg ha^{-1 …}

Molecular Evolution Of Herbicide Resistance To Phytoene Desaturase Inhibitors In Hydrilla Verticillata And Its Potential Use To Generate Herbicide-Resistant Crops, R. S. Arias, Michael D. Netherland, Brian E. Scheffler, Atul Puri, Franck E. Dayan

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Hydrilla [Hydrilla verticillata (Lf) Royle] is one of the most serious invasive aquatic weed problems in the USA. This plant possesses numerous mechanisms of vegetative reproduction that enable it to spread very rapidly. Management of this weed has been achieved by the systemic treatment of water bodies with the herbicide fluridone. At least three dioecious fluridone-resistant biotypes of hydrilla with two- to fivefold higher resistance to the herbicide than the wild-type have been identified. Resistance is the result of one of three independent somatic mutations at the arginine 304 codon of the gene encoding phytoene desaturase, the molecular target …

Effect Of Oxygen Management On Culture Performance Of Channel Catfish In Earthen Ponds, Eugene L. Torrans

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aeration allows for higher feeding rates and increased production of channel catfish Ictalurus punctatus in intensive and semi-intensive aquaculture systems. However, the effect of specific dissolved oxygen (DO) concentrations on various production parameters remains unknown. The purpose of this 2-year study was to determine the effect of daily minimum DO concentration on channel catfish production. Six 0.1-ha ponds were each equipped with three 0.37-kW (0.5-hp) aerators and one 0.37-kW circulator. Dissolved oxygen concentrations were monitored and recorded with a commercial oxygen monitor that also controlled aeration. During both years, aeration in the high-oxygen treatment was initiated when the DO concentration …