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Identification Of An L-Rhamnose Synthetic Pathway In Two Nucleocytoplasmic Large Dna Viruses, Madhu Parakkottil Chothi, Garry A. Duncan, Andrea Armirotti, Chantal Abergel, James R. Gurnon, James L. Van Etten, Cinzia Bernardi, Gianluca Damonte, Michela Tonetti

James Van Etten Publications

Nucleocytoplasmic large DNA viruses (NCLDVs) are characterized by large genomes that often encode proteins not commonly found in viruses. Two species in this group are Acanthocystis turfacea chlorella virus 1 (ATCV-1) (family Phycodnaviridae, genus Chlorovirus) and Acanthamoeba polyphaga mimivirus (family Mimiviridae), commonly known as mimivirus. ATCV-1 and other chlorovirus members encode enzymes involved in the synthesis and glycosylation of their structural proteins. In this study, we identified and characterized three enzymes responsible for the synthesis of the sugar L-rhamnose: two UDP-D-glucose 4,6-dehydratases (UGDs) encoded by ATCV-1 and mimivirus and a bifunctional UDP-4-keto-6-deoxy-D-glucose epimerase/reductase (UGER) from mimivirus. Phylogenetic …

Overall Growth Of Tomato (Lycopersicon Esculentum L. Cv. Glacier) Inoculated With Species Of Glomus And Trichoderma Growing Under Greenhouse Conditions, Brian J. Adkins

Horticulture and Crop Science

The overall plant growth of tomato (Lycopersicon esculentum L. cv. Glacier) cultivated in greenhouse conditions along with inoculation treatments of beneficial fungi species were observed. This study included 2 brand name products containing species of fungi which include: 1)Botanicare Guardian TR containing Trichoderma harzianum 10,000,000 CFU/g, T. hamatum 10,000,000 CFU/g, T. koningii 10,000,000 CFU/g; and 2)Botanicare Guardian MY containing Glomus intraradices 57 propagules/g;G. fasiculatum 57 propagules/g; G. etunicatum 57 propagules/g; G. clarum 57 propagules/g. Treatments include: Treatments: 1) 2g Botanicare Guardian TR; 2) 2g Botanicare Guardian MY; 3) 1g Botanicare Guardian TR + 1g Botanicare Guardian MY; and …

A Comparison Of Costs And Returns For Organic And Conventional Cabernet Sauvignon Grape Production In San Luis Obispo County, Amanda N. Johansen

Agribusiness

This study examined the differences in costs and profitability for established conventional and organic Cabernet Sauvignon vineyards in the Edna Valley region of San Luis Obispo County, California. The study used a partial budgeting approach to compare cost and profitability for established vineyards for 2009, and thus ignored transition costs. Data were obtained from UC Davis cost studies for organic and conventional grape production in other regions of California in previous years. Adjustments made to these costs to account for changes in input use, input costs and grape prices in San Luis Obispo County during the 2009 growing season.

The …

Greening The Green Revolution: Moving Beyond Chemicals To Sustainable Agricultural Practices, Elizabeth G. Crawley

Electronic Theses and Dissertations

Agriculture has dominated the economy of many developing countries for centuries, which has led to development policies that center on agricultural development. An obvious approach to improved production is to decrease agricultural losses in the fields and increase efficiency to markets. This study focuses on the developmental role of pesticides and chemical fertilizers on non-traditional agricultural export farming and the adoption of IPM techniques. With farmers in the Comayagua Valley of Honduras, an Asian vegetable production center for the country, as the study population, the costs and benefits of planting oriental vegetables was examined. Statistical analysis was used to examine …

Fragaria Species Grown In A Greenhouse Cropping System Chemigated By Phosfite® And Bacillus® In Subsidence Of Phytophthora Fragariae And Verticillium Dahliae, Russell L. Morgan

Earth and Soil Sciences

Strawberry yields depend directly on infestation of Phytophthora fragariae and Verticillium dahliae in correspondance to the use of Phosfite and Bacillus. The objective is to find understanding of newly administered techniques in prevention of Phytophthora fragariae and Verticillium dahliae and prohibiting the use of Methyl Bromide. Application of Phosfite and Bacillus on patented Fragariae species to identify utilization of P and ZN forms and their aid in prevention of Phytophthora and Verticillium species. In the Plots on the western bench the developmental symptoms of PRR disease were absent within all infested soil containers containing the FHS-1 crop. In the plots …

The Use Of Horticulture And Gardening As A Special Education Tool At The High School Level, Krysta Marie Johnson

Horticulture and Crop Science

THIS REPORT CONTAINS PLANNING METHODS AND INSTALLATION PROCEDURE FOR A RAISED VEGETABLE GARDEN FOR WILSONVILLE HIGH SCHOOL, IN WILSONVILLE, OREGON. THE PRIMARY PURPOSE OF THE GARDEN WAS TO USE IT AS A LEARNING TOOL FOR THE SPECIAL EDUCATION DEPARTMENT AT WILSONVILLE HIGH SCHOOL. UPON DOING MORE RESEARCH IT BECAME EVIDENT THAT THE GARDEN CAN ALSO BE USED AS A HEALING TOOL FOR STUDENTS WHO SUFFER FROM ATTENTION DISORDERS AND WHO HAVE EMOTIONAL AND LEARNING DISABILITIES. THE STUDENTS HAVE BECOME INVESTED IN THE GARDEN PROJECT AND LOOK FORWARD TO DOING MORE PROJECTS WITH THEIR CLASS.

Seed Production And Maturation Of The Western Prairie Fringed Orchid, Bonnie Warner Alexander, Donald Kirby, Mario Biondini, Edward Dekeyser

The Prairie Naturalist

A population of threatened western prairie fringed orchid (Platanthera praeclara) was selected in 2004 on the Sheyenne National Grassland in southeastern North Dakota to study seed production and maturation for future use in population viability modeling. We randomly collected 30 seed capsules from the population under a permit from the U.S. Fish and Wildlife Service to: 1) identify capsule parameters that might be correlated with seed number and viability, 2) estimate an appropriate sample size to obtain accurate seed production estimates, 3) quantify seed production and viability per seed capsule, and 4) document temporal patterns in seed embryo …

Cattle Grazing Reduces Survival And Reproduction Of The Western Prairie Fringed Orchid, Bonnie Warner Alexander, Donald Kirby, Mario Biondini, Edward Dekeyser

The Prairie Naturalist

QuantifYing impacts of livestock grazing and prairie management strategies on the threatened western prairie' fringed orchid (Platanthera praeclara) is difficult due to the erratic appearance of the orchid above-ground. We monitored above-ground survival of orchids from flowering to mature seed capsule production, comparing plant height, flower numbers, and seed capsule numbers from 2002-2004 in rotationally grazed pastures and non-grazed sites. Orchid survival differed significantly between grazed and non-grazed pastures, with the proportion of plants surviving from flower to capsule production consistently lower in grazed pastures. Mean orchid survival in grazed and non-grazed areas was 40% and 87%, respectively. …

The Prairie Naturalist, Volume 42, No. 1/2 June 2010, The Great Plains Natural Science Society

The Prairie Naturalist

CHANNEL CATFISH DIETS INCLUDE SUBSTANTIAL VEGETATION IN A MISSOURI RIVER RESERVOIR • J. D. Dagel, M. R. Wuellner, and D. W. Willis

USE OF LATE SEASON STANDING CORN BY FEMALE WHITE-TAILED DEER IN THE NORTHERN GREAT PLAINS DURING A MILD WINTER • T. W. Grovenburg, C. N. Jacques, C. C. Swanson, R. W. Klaver, and J. A. Jenks

COMPARISON OF TWO ZOOPLANKTON SAMPLING GEARS IN SHALLOW, HOMOGENOUS LAKES • M. E. Livings, C. W. Schoenebeck, and M. L. Brown

VEGETATION TRENDS ON A WASTE ROCK REPOSITORY CAP IN THE NORTHERN BLACK HILLS • A. C. Korth, G. E. Larson, L. …

Channel Catfish Diets Include Substantial Vegetation In A Missouri River Reservoir, Jonah D. Dagel, Melissa R. Wuellner, David W. Willis

The Prairie Naturalist

Channel catfish (Ictalurus punctatus) are native to Lake Sharpe, a Missouri River mainstem reservoir, and are common in angler catches. Channel catfish growth has declined since the formation of the reservoir in 1963. Mean lengths at time of capture for channel catfish ages 9, 10, II, and 12 have decreased by 69, 55, 115, and 21S mm, respectively, since impoundment. The objective of this study was to document monthly food habits of channel catfish throughout the growing season (May-August) in Lake Sharpe to assess potential effects of diet on growth. Although channel catfish consumed both macro invertebrates and …

Observations Of Little Blue Herons Nesting In North Dakota, And An Instance Of Probable Natural Hybridization Between A Little Blue Heron And A Cattle Egret, Alisa J. Bartos, Lawrence Igl, Marsha A. Sovada

The Prairie Naturalist

The little blue heron (Egretta caerulea) is native to North America and most commonly breeds along the coast of the southeastern United States and the Gulf of Mexico through Central America and into South America (Rodgers and Smith 1995). In North America, little blue herons rarely nest outside their coastal range. However, nesting has been documented at several locations in the northern plains including Brown, Kingsbury, and Charles Mix counties, South Dakota (Naugle et al. 1996, Tallman et al. 2002); Pope County, Minnesota (Green and Janssen 1975); and possibly in southeastern Saskatchewan (Nero and Lein 1971, Smith et al. 1996). …

Bat Survey Along The Missouri River In Central South Dakota, Alyssa M. Kiesow, Joshua A. Kiesow

The Prairie Naturalist

ats are efficient predators of night-flying insects (Whitaker 1993), particularly in urban, agricultural, and forested areas in South Dakota (Kiesow 2004). In South Dakota, 6 bat species are considered rare and presently monitored by the South Dakota Natural Heritage Program (SDNHP; South Dakota Natural Heritage Program 2002). Because bats serve a vital ecosystem function there is an increased need to conserve bats and their habitats. Hence, the objectives of this project were to determine bat species richness along the Missouri River in central South Dakota. We conducted surveys of bats using mist-nets and acoustic detection from early May to early …

Use Of Late Season Standing Corn By Female White-Tailed Deer In The Northern Great Plains During A Mild Winter, Troy W. Grovenburg, Christopher N. Jacques, Christopher C. Swanson, Robert W. Klaver, Jonathan Jenks

The Prairie Naturalist

Winter habitat and resource use of white-tailed deer (Odocoileus virginianus) have been studied extensively throughout their northern range. However, limited information exists on deer use of late season standing corn. We evaluated standing corn use by female white-tailed deer on winter range in north-central South Dakota during winter 2005-2006. Results indicate that cover type selection occurred at the population (P < 0.001) and home range (P < 0.001) levels. PopUlation level analysis indicated selection for standing corn (vi> = 4.31) and Conservation Reserve Program (CRP) grasslands (vi> = 2.81). Similarly, at the home range level, deer selected for standing corn (vi> = 1.35) and CRP grasslands (vi> = 1.44). Deer disproportionately increased use of standing corn and CRP …

Potential Importance Of Competition, Predation, And Prey On Yellow Perch Growth From Two Dissimilar Population Types, Casey W. Schoenebeck, Michael L. Brown

The Prairie Naturalist

Our objective was to describe the influence of population dynamics, inter- and intra-specific competition, predation, prey abundance, and prey size structure on yellow perch (Perca flavescens) growth for two perch population types (high-quality and low-quality) commonly found in South Dakota glacial lakes. We selected Lake Cochrane as a low quality yellow perch population and Lake Madison as a high quality perch population. Sunfish (Lepomis spp.) relative abundance was greater (P < 0.05) in Lake Cochrane than Lake Madison, suggesting interspecific competition may have a large influence on yellow perch growth. Indices of available sizes and densities of zooplankton were lower (P < 0.05) in Lake Cochrane than Lake Madison, suggesting that increased competition for large zooplankton may have reduced zooplankton size structure and density. Zooplankton may be a limiting resource in South Dakota glacial lakes when both yellow perch and sunfish are feeding primarily on zooplankton which may explain differences in perch growth rates between population types .

Climatological Factors Influencing Yellow Perch Production In Semi-Permanent Wetlands, Christopher M. Longhenry, Michael L. Brown, Todd R. St. Sauver

The Prairie Naturalist

Climatological factors such as temperature, wind, and precipitation have been reported to affect fish reproduction and recruitment in large lakes; however, little is known about these relationships in shallow, semi-permanent wetlands. We utilized age-O yellow perch (Perca flavescens) aquacultural harvest data to model climate effects on variability of juvenile yellow perch year class strength in semi-permanent wetlands. Overall, March through May precipitation, April air temperature, and a wetland parameter (i.e., intrinsic characteristics) provided the best-supported model. These results potentially indicate that spring weather patterns have an influence on yellow perch year class strength in semi-permanent wetlands.

Comparison Of Two Zooplankton Sampling Gears In Shallow, Homogeneous Lakes, Maude E. Livings, Casey W. Schoenebeck, Michael L. Brown

The Prairie Naturalist

We compared two zooplankton collection gears, Wisconsin nets and column samplers, to evaluate the effectiveness of each gear in quantifying inshore and offshore zooplankton density and size structure in shallow, homogeneous lakes. Zooplankton densities (within gear) did not differ (P > 0.05) between inshore and offshore sites in either study lake, with the exception of Wisconsin-netted Cyclops sp. in Lake Goldsmith. Wisconsin net samples produced a higher mean zooplankton density than column samplers for Bosmina sp., Cyclops sp., and Daphnia sp. in East Oakwood Lake and for Cyclops sp. (inshore), Daphnia sp., and Diaptomus sp. in Lake Goldsmith. Zooplankton densities had …

Evaluating The Impacts Of Black-Tailed Prairie Dogs On Vegetation In Traditional And Non-Traditional Habitats, Erin M. Lehmer, Laurel Hartley, Jesse Lanci, Charlie Kolb

The Prairie Naturalist

The wildland-urban interface (WUI), defined as areas where human development meets undeveloped wildland (Radeloff et al. 2005), is a focal area for humanwildlife interactions in many communities of the western United States, particularly in those areas that have experienced rapid and expansive human population growth. Since 1960, conversion of rural to urban land has more than doubled in the United States (Theobald 2001). The eastern front range of the Rocky Mountains has experienced one of the most rapid urban expansions in the country, with approximately 110,000 hectares of undeveloped rural land being converted to human-developed land every year between 1992 …

Forage News [2010-06], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• KFGC Update
• U.S. Supreme Court Reviews Ban on Roundup Ready® Alfalfa
• Increase Pasture Profits Using Cross Fences
• Plant Growth Regulator to Increase Pasture Growth
• Alfalfa Cutting Height to Maximize Forage Yield and Quality
• Traditional Ecosystem Services of Forage and Grazing Lands
• Performance and Profitability of Stocker Cattle Grazing KY 31, Jesup MaxQ & Winter Annual Pastures
• Forage Quality of Jesup MaxQ Tall Fescue

Taxonomy, Biogeography And Pest Status Of Marmara Sp. In Northern Mexico And California Citrus Production, Paul Semet

Master's Theses

A novel lepidopteran sex pheromone lure which was thought to be species-specific to the citrus pest Marmara gulosa (Lepidoptera: Gracillariidae) Guillén (McElfresh et al. 2009) has attracted male moths exhibiting two distinct morphologies. The morphological features examined were the sclerotized parts that make up the male genitalia; which include the valvular lobes, costal lobes, cucullar lobes, and the aedeagus. The sclerotized parts were methodically dissected and mounted on microscope slides. Digital images captured of the slide-mounted specimens proved to be inconsistent with the illustrations provided in the original Marmara gulosa species description (Guillén et al. 2001).

The morphologies of all …

Isoschaftoside, A C-Glycosylflavonoid From Desmodium Uncinatum Root Exudate, Is An Allelochemical Against The Development Of Striga, Antony M. Hooper, Muniru K. Tsanuo, Keith Chamberlain, Kay Tittcomb, Julie Scholes, Ahmed Hassanali, Zeyaur R. Khan, John A. Pickett

All Peer-Reviewed Publications

In East African small-holder farming of maize, the cattle forage legume, Desmodium uncinatum is used as an intercrop due to its allelopathic inhibition of parasitism by Striga hermonthica, an obligate parasitic weed that can devastate the maize crop. Bioassay-guided fractionation of the root extract of D. uncinatum revealed isoschaftoside to be the main compound in the most potent fraction inhibiting growth of germinated S. hermonthica radicles. Bioassays repeated with isoschaftoside isolated from a different plant source, Passiflora incarnata, proved it to be a biologically active component. Analysis of the root exudates produced by hydroponically grown D. uncinatum showed isoschaftoside to …

Environmental Variables Influencing The Severity Of Pierce's Disease In California Grapevines, Christopher James Boisseranc

Master's Theses

This project was designed to correlate environmental variables with the development of Pierce’s Disease (PD), an infection caused by the gram negative bacterium Xylella fastidiosa (Xf), in grapes (Hopkins et al. 2002). PD is one of the most difficult crop pathogens to manage because it is vectored by insects and its continued presence in the vine is usually fatal. PD is influenced by the interaction of host, disease and vector, and probably many other environmental variables. The general objective was to study and identify the most important variables involved in the expression of Pierce’s Disease.

Over a two year period, …

Vittatidera Zeaphila (Nematoda: Heteroderidae), A New Genus And Species Of Cyst Nematode Parasitic On Corn (Zea Mays), Ernest C. Bernard, Zafar A. Handoo, Thomas O. Powers, Patricia A. Donald, Robert D. Heinz

Department of Plant Pathology: Faculty Publications

A new genus and species of cyst nematode, Vittatidera zeaphila, is described from Tennessee. The new genus is superficially similar to Cactodera but is distinguished from other cyst-forming taxa in having a persistent lateral field in females and cysts, persistent vulval lips covering a circumfenestrate vulva, and subventral gland nuclei of the female contained in a separate small lobe. Infective juveniles (J2) are distinguished from all previously described Cactodera spp. by the short stylet in the second-stage juvenile (14-17 mm); J2 of Cactodera spp. have stylets at least 18 mm long. The new species also is unusual in that …

Botanical Report Of Tierra Redonda Mountain Blm Area Of Critical Environmental Concern, San Luis Obispo County, California (W120˚59’41”; N35˚45’59”)., Anthony Baniaga, Andrew Theo Fitanides

Biological Sciences

The purpose of this document is to report the results of a botanical survey of a portion of the Tierra Redonda Mountain Area of Critical Environmental Concern. The survey was conducted for the Bureau of Land Management, and executed between October 2009 and June 2010. Tierra Redonda Mountain is the type locality for the Tierra Redonda formation, and has weathered to form steep slopes of exposed chaparral and protected woodlands. Four general community types were found; foothill woodland, chaparral, southern coastal scrub and dune scrub. Alliances determined by The Manual of California Vegetation (2nd ed.) were: Quercus douglasii Woodland, Quercus …

Fire: Ecology & Prevention, Justin R. Frey

Social Sciences

No abstract provided.

Poisonous Rangeland Plants In San Luis Obispo County, Sara Litten, Amanda Ou

Animal Science

Poisonous Rangeland Plants in San Luis Obispo County is a comprehensive educational guide to rangeland plants that are toxic to domestic livestock. This guide begins with an exploration of how the biological systems are affected by the poisonous plant toxins. The biochemistry behind these toxins is included in the discussion. Next, reference material for fourteen plants that inhabit San Luis Obispo County is provided. This information includes specific toxins found in poisonous plants, affected animals, symptoms of poisoning, stages of growth, lethal dose, and distribution of the plant in California. This section of the guide is filled with helpful photos …

Good Agricultural Practices For Food Safety Of Fresh Produce, Laurie Hodges

Department of Agronomy and Horticulture: Faculty Publications

What are the guiding principles of food safety for fresh produce?

• Once contaminated, removing or killing pathogens on produce is very difficult.

• Preventing microbial contamination at all steps, from production to distribution, is strongly favored over treatments to eliminate contamination that may have occurred.

• Document the implementation of prevention programs, and educate workers at all levels of the agricultural and packing environments on food safety.

Key Signatures of a Credible Food Safety Program

The following is a condensed checklist of practices and conditions that reduce the potential for fresh produce to be exposed to pathogenic microbes. Review …

In Situ Development Of Western Prairie Fringed Orchid Seeds, Protocorms, And Seedlings In Grazed And Non-Grazed Prairie Habitat, Bonnie Warner Alexander, Donald Kirby, Mario Biondini, Edward Dekeyser

The Prairie Naturalist

In 1989, the U.S. Fish and Wildlife Service listed the western prairie fringed orchid (Platanthera praeclara) as threatened. Although this orchid has been monitored for years, there is little scientific documentation of its biology, ecology, and phenology, nor the impacts of management activities on its populations. Our objectives were to document seed germination and seedling production rates after one year in situ, and compare seed germination in grazed and non-grazed prairie habitat in the Sheyenne National Grassland (SNG) in southeastern North Dakota. Of 18,717 planted seeds, we recovered 1,561 swollen embryos, 94 protocorms, and 51 seedlings. We documented no difference …

Ring-Necked Pheasant Nest Parasitism Of Sharp-Tailed Grouse Nests In Southwest North Dakota, Benjamin A. Geaumont, Kevin K. Sedivec, Christopher S. Schauer

The Prairie Naturalist

Numerous investigators have reported observations of ring-necked pheasant (RNP; Phasianus colchicus) eggs in nests of other gamebirds and waterfowl species (Errington and Hamerstrom 1938, Westemeier et al. 1998, Hagen et al. 2002, Krakauer and Kimball 2009). Previously recorded hosts include wild turkey (Meleagris gallopavo; Schmutz 1988), northern bobwhite (Colinus virginianus; Westemeier et al. 1989), greater prairie-chickens (Tyrnpanuchus cupido; Westemeier et al. 1998), and lesser prairie-chickens (T. pallidicinctus; Hagen et al. 2002). The reported occurrence of nest parasitism during these studies has generally been low with the highest reported occurrences found in …

Early Winter Feeding On Elm Bark By Eastern Fox Squirrels Near The Western Range Terminus, Dessa K. Montgomery, Raymond S. Matlack

The Prairie Naturalist

Fox squirrels (Sciurus niger) feed on >30 different types of food across their extensive range ~Korschgen 1981) including tree buds, flowers, fruits, seeds, and, on occasion, bark. For a large portion of the year, fox squirrels rely heavily on tree seeds (Koprowski 1991). For three consecutive years (2007-2009), we observed fox squirrels feeding on bark of elm trees ( Ulmus sp.) on the campus of West Texas A&M University, Canyon, Texas. Squirrels began feeding on bark in late November shortly after leaves had fallen off the trees and continued almost daily throughout the winter. In late February, when …

Cover Crops For Utah Gardens, Michael Johnson, Maggie Wolf, Rich Keonig

All Current Publications

No abstract provided.