Digital Commons Network^™

Integrated Soil–Crop System Management For Food Security, Xin-Ping Chen, Zhen-Ling Cui, Peter M. Vitousek, Kenneth Cassman, Pamela A. Matson, Jin-Shun Bai, Qing-Feng Meng, Peng Hou, Shan-Chao Yue, Volker Römheld, Fu-Suo Zhang

Department of Agronomy and Horticulture: Faculty Publications

China and other rapidly developing economies face the dual challenge of substantially increasing yields of cereal grains while at the same time reducing the very substantial environmental impacts of intensive agriculture. We used a model-driven integrated soil–crop system management approach to develop a maize production system that achieved mean maize yields of 13.0 t ha−1 on 66 on-farm experimental plots—nearly twice the yield of current farmers’ practices—with no increase in N fertilizer use. Such integrated soil–crop system management systems represent a priority for agricultural research and implementation, especially in rapidly growing economies.

Oral Presentation: Plant Genes And Drought Tolerance, Norris Lam

Festival of Communities: UG Symposium (Posters)

Research has shown that a gene from C3 xerophyte Larrea tridentata (creosote bush), LtWRKY21, is involved in pathways governing creosote bush’s high tolerance to environmental stress. By understanding the way in which creosote bush adapts to drought, crop plants can be engineered to be more drought tolerant during times of imminent global climate change. To study the underlying mechanisms of creosote bush drought response, the LtWRKY21 gene was mobilized into the model organism Arabidopsis thaliana. Chlorophyll degradation, cellular electrolyte leakage, and water content in leaves will serve as indicators of drought tolerance in LtWRKY21-transgenic A. thaliana after treatment in chemically …

Does Thermal Stress Cause Females Of The Plant Bryum Argenteum To Manipulate The Sex Ratios Of Their Offspring?, Elisha Rhodes, Lloyd Stark

Festival of Communities: UG Symposium (Posters)

About half of all moss taxa exhibit female-biased sex ratios, and bryophyte male rarity remains largely unexplained. One possible explanation is differential stress tolerance of spores due to maternal sporophyte manipulation during stress. To test this hypothesis, sporophytes of the species Bryum argenteum were subjected to thermal stress and observed for growth abnormalities and sporophyte abortions. Data display a correlation between increased temperature and increased sporophyte abortions as well as increased time to complete meiosis, possibly indicating decreased fitness. Continued global warming may create more stressful environments for sporophytes resulting in the elimination of males from local populations.

Traversing Swanton Road, 5th Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …

Screening Synteny Blocks In Pairwise Genome Comparisons Through Integer Programming, Haibao Tang, Eric Lyons, Brent S. Pedersen, James C. Schnable, Andrew H. Paterson, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Background:

It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have repeatedly experienced whole genome duplication (WGD) events. To compare multiple “subgenomes” derived from genome duplications, we need to relax the traditional requirements of “one-to-one” syntenic matchings of genomic regions in order to reflect “one-to-many” or more generally “many-to-many” matchings. However this relaxation may result in the identification of synteny blocks that are derived from ancient shared WGDs that are not of interest. For many downstream analyses, we …

Arctic Mustard Flower Color Polymorphism Controlled By Petal-Specific Downregulation At The Threshold Of The Anthocyanin Biosynthetic Pathway, Cynthia A. Dick, Jason Buenrostro, Timothy Butler, Matthew L. Carlson, Daniel J. Kliebenstein, Justen B. Whittall

Biology

Intra- and interspecific variation in flower color is a hallmark of angiosperm diversity. The evolutionary forces underlying the variety of flower colors can be nearly as diverse as the colors themselves. In addition to pollinator preferences, non-pollinator agents of selection can have a major influence on the evolution of flower color polymorphisms, especially when the pigments in question are also expressed in vegetative tissues. In such cases, identifying the target(s) of selection starts with determining the biochemical and molecular basis for the flower color variation and examining any pleiotropic effects manifested in vegetative tissues. Herein, we describe a widespread purple-white …

Saturday In The Park With Franz And Joyce, Julie Trachman, William A. Casari, Nelson Nunez-Rodriguez, Flor Henderson, Yoel Rodriguez, Jason Libfeld

Touchstone

No abstract provided.

Section Abstracts: Botany

Virginia Journal of Science

Abstracts of the Botany Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011. University of Richmond, Richmond VA.

Growing South Dakota (Spring 2011), College Of Agriculture &. Biological Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

[Page] 2 Classroom to Careers: An Optimistic Outlook Awaits Ag & Biological Sciences Graduates
[Page] 5 New Opportunities: Intro Ag Courses To Be Offered in Rapid City
[Page] 6 Budget Reality: Funding Cuts Prompt Structure and Staff Changes
[Page] 7 Gearing Up for DakotaFest: Replicated SDSU Campus, Educational Forums and Fundraising Auction Planned
[Page] 8 Continuing a Legacy: &1 Million Livestock Judging Endowment Being Established
[Page] 10 4-H Fun: Unique 4-H Activities Spark Student Interest in Science
[Page] 12 Innovative Outreach: BBQ Boot Camp Connect Consumers to Meat Industry
[Page] 13 College News
[Page] 14 Relevant Research: New, More Efficient …

Tallgrass Prairie Center Newsletter, Spring 2011, University Of Northern Iowa. Tallgrass Prairie Center.

Tallgrass Prairie Center Newsletter

Inside This Issue:

-- Natural Landscaping at UNI
-- Map of the Mid-Continent Tallgrass Prairie
-- Iowa Prairie Conference
-- Reaching Out
-- Interested in planting a prairie? Or perhaps you're restoring a remant savanna prairie or wetland?
-- Another Roadside Attraction: AFIRM Winter Meeting & REAP Day at the Capitol (and Weed Sociology 101)
-- Student Employee Profiles

Forage News [2011-04], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• Kentucky Alfalfa Conference Wins Outstanding Extension Program Award
• April Grazing School
• Best Practices to Hasten Field Drying of Grasses and Alfalfa
• Maturity Determines Forage Quality
• UK Switchgrass for Biomass Project Online Learning Modules now Available on our Website
• Invasive Species' Abundance Similar at Native and Introduced Sites
• NAFA Descends on DC to Talk Alfalfa
• Beef Cow Numbers Decline During 2010

Review Of The Ecology And Management Of Prairies In The Central United States. By Chris Helzer., David J. Gibson

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

This relatively short book is an informative and easyto- read account of the author's philosophy and advice on how to manage prairies in the Central U.S., an area corresponding to the eastern portion of the Great Plains where tall- and mixed-grass prairie occurred. With fragmentation and huge losses of this region's natural prairie habitat, there is a growing appreciation for active management of remnants and prairie restoration. This book provides an excellent introduction to this topic.

Review Of Pieces Of The Plains: Memories And Predictions From The Heart Of America. By John Janovy, Jr., Mark Hammer

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

John Janovy, Jr., author, parasitologist, and Varner Professor of Biological Sciences at the University ofNebraska- Lincoln, describes his book as "sort of a memoir, but one in which experience is the main character, instead of the writer." Janovy divides this experience into three sections describing his past, his present, and humanity's future.

Janovy the teacher is never far from each chapter's storyline. Describing his central theme as "education in the broadest sense, a constant learning derived from exploration of things and places," he sets out in the book's pages to engage in a discussion of big ideas just as he …

Review Of The Tallgrass Prairie Center Guide To Prairie Restoration In The Upper Midwest. By Daryl Smith, Dave Williams, Greg Houseal, And Kirk Henderson., Gerry Steinauer

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

Tallgrass prairie restoration in the Upper Midwest is the focus of this guide. Its geographic area of coverage includes the eastern fifth of South Dakota and Nebraska and northeast Kansas, a region some ascribe to the eastern Great Plains. Two types of prairie restoration are dealt with: prairie reconstruction, which the authors define as creating prairie from scratch on sites where prairie plants no longer exist; and prairie remnant restoration, defined as upgrading degraded existing prairies. The book comprises five sections: "Reconstruction Planning," "Implementing Reconstruction," "Prairie Restoration and Management," "Special Cases," and "Native Seed Production." There are 16 chapters, each …

Review Of 620 Wild Plants Of North America: Fully Illustrated. By Tom Reaume., Mark J. Leoschke

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

Beautifully and profusely illustrated with the author's black-and-white drawings, the 12-year project that became this book shows his love for plants. Tom Reaume focuses on a representative selection of primarily native vascular plants of the Great Plains of Canada and the northern United States found in forests, lakes, prairies, rivers, and wetlands. The book appears to be designed as a supplement for an introductory course in plant taxonomy.

This book is a useful reference for those interested in the flora of the northern Great Plains and adjacent regions. I highly recommend it for college and university libraries where botany and …

Review Of The Tallgrass Prairie Center Guide To Seed And Seedling Identification In The Upper Midwest. By Dave Williams., H. L. Hillhouse

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

This book will please both practitioners of prairie restoration and more general prairie enthusiasts. It includes 72 grass and forb species, and the focus is clearly on species often found in tallgrass prairie plantings in the upper Midwest. The grasses and forbs are presented separately here, and for each group a morphological key is provided to divide the species into "Key Characteristic Groups." Because these groups are based on morphological similarity, species within a group are often-but not always-closely related.

Short and highly portable, the book covers the most common species in plantings. The only thing that would have delighted …

Do Invasive Riparian Woody Plants Affect Hydrology And Ecosystem Processes?, Julie Huddle, Tala Awada, Derrel Martin, Xinhua Zhou, Sue Ellen Pegg, Scott Josiah

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

© 2011 Copyright by the Center for Greot Plains Studies, University of Nebraska-Lincoln

Vegetation Classification And Mapping Of Homestead National Monument Of America, Project Report, Kelly Kindscher, Hayley Kilroy, Jennifer Delisle, Quinn Long, Hillary Loring, Kevin Dobbs, Jim Drake

United States National Park Service: Publications

Executive Summary

Homestead National Monument (HOME) was created at the to celebrate the significance of the Homestead Act of 1862 which granted 160 acres of free land to claimants and was one of the most significant and enduring events in the westward expansion of the United States. The National Monument encompasses 184 acres in Gage County, west of Beatrice, Nebraska. This unique site also hosts the oldest prairie restoration in the National Park system, and the second-oldest tallgrass prairie restoration known. This park unit also has a small remnant of native tallgrass prairie and remnants of bur-oak forest.

A three-year …

Characterizing The Chemoprevention Potential Of Amenity Grass Phenolic Extracts In Vitro And The Corresponding Nutraceutical Targets Within Hepg2 Carcinoma Cells, Casey J. Wegner

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

This research has revealed significant chemopreventive potential belonging to the planet’s most renewable and abundant plant source: amenity grasses.  The characterization results from Chapter 1 demonstrated the potential chemoprevention attributes of supina bluegrass and bermudagrass crude extracts linked to the extensive phenolic acid profiles of these amenity grasses.  In contrast to cereals, amenity grass phenolic extracts (AGPE) offer appreciable amounts of unbound/free ferulic acid that would be available for rapid in vivo absorption.  The literature has shown ferulic acid to be a highly available and health benefitting phenolic compound.  Chapter 1 in vitro studies demonstrated AGPE-induced antiproliferation and apoptotic induction …

Mojave Applied Ecology Notes Spring 2011, Scott R. Abella, Ross Guida, S. D. Smith, Christopher L. Roberts, Haroon Stephen, William J. Smith, Zhongwei Liu, James S. Holland, Aurore Giguet

Mojave Applied Ecology Notes

Red brome distribution in the eastern Mojave Desert, A look at the UNLV xeric gardens and Marjorie Barrick museum, Summary of recent science synthesis efforts

Argonaute10 And Argonaute1 Regulate The Termination Of Floral Stem Cells Through Two Micrornas In Arabidopsis, Lijuan Ji, Xigang Liu, Jun Yan, Wenming Wang, Rae Eden Yumul, Yun Ju Kim, Thanh Theresa Dinh, Jun Liu, Xia Cui, Binglian Zheng, Manu Agarwal, Chunyan Liu, Xiaofeng Cao, Guiliang Tang, Xuemei Chen

Plant and Soil Sciences Faculty Publications

Stem cells are crucial in morphogenesis in plants and animals. Much is known about the mechanisms that maintain stem cell fates or trigger their terminal differentiation. However, little is known about how developmental time impacts stem cell fates. Using Arabidopsis floral stem cells as a model, we show that stem cells can undergo precise temporal regulation governed by mechanisms that are distinct from, but integrated with, those that specify cell fates. We show that two microRNAs, miR172 and miR165/166, through targeting APETALA2 and type III homeodomain-leucine zipper (HD-Zip) genes, respectively, regulate the temporal program of floral stem cells. In particular, …

A First Insight Into Population Structure And Linkage Disequilibrium In The U.S. Peanut Minicore Collection, Vikas Belamkar, Michael Gomez Selvaraj, Jamie L. Ayers, Paxton R. Payton, Naveen Puppala, Mark D. Burow

Department of Agronomy and Horticulture: Faculty Publications

Knowledge of genetic diversity, population structure, and degree of linkage disequilibrium (LD) in target association mapping populations is of great importance and is a prerequisite for LD-based mapping. In the present study, 96 genotypes comprising 92 accessions of the US peanut minicore collection, a component line of the tetraploid variety Florunner, diploid progenitors A. duranensis (AA) and A. ipaënsis (BB), and synthetic amphidiploid accession TxAG-6 were investigated with 392 simple sequence repeat (SSR) marker bands amplified using 32 highly-polymorphic SSR primer pairs. Both distance- and model-based (Bayesian) cluster analysis revealed the presence of structured diversity. In general, the wild-species accessions …

Prunus Domestica Pathogenesis-Related Protein-5 Activates The Defense Response Pathway And Enhances The Resistance To Fungal Infection, Ashraf El-Kereamy, Islam El-Sharkawy, Rengasamy Ramamoorthy, Ali Taheri, Deena Errampalli, Prakash Kumar, Subramanian Jayasankar

Agricultural and Environmental Sciences Faculty Research

Pathogenesis-related protein-5 (PR-5) has been implicated in plant disease resistance and its antifungal activity has been demonstrated in some fruit species. However, their roles, especially their interactions with the other defense responses in plant cells, are still not fully understood. In this study, we have cloned and characterized a new PR-5 cDNA named PdPR5-1 from the European plum (Prunus domestica). Expression of PdPR5-1 was studied in different cultivars varying in resistance to the brown rot disease caused by the necrotrophic fungus Monilinia fructicola. In addition transgenic Arabidopsis, ectopically expressing PdPR5-1 was used to study its role in other plant defense …

Leaf Number Indicates Salt Tolerance Of Young Seedling Families Of European Aspen (Populus Tremula L.) Growing In Different Soils, Lu-Min Vaario, Kim Yrjälä, Matti Rousi, Timo Sipila, Pertti Pulkkinen

Aspen Bibliography

Soil salinity limits plant productivity and quality. We evaluated the response of 12 aspen (Populus tremula) families to salt stress in two different soils irrigated for 4-weeks with 0, 80 or 160 mM saline solution. Easily measurable characteristics such as shoot height, leaf number, dry mass as well as the distribution of sodium (Na+) ions were measured in 5-month-old aspen seedlings raised in controlled greenhouse conditions on two different soils. Growth among families varied significantly, and the interaction between family and soil type was significant. From 2–5 months, leaf number correlated with that of the first month and salin-ity tolerance. …

Genes Identified By Visible Mutant Phenotypes Show Increased Bias Toward One Of Two Subgenomes Of Maize, James C. Schnable, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Not all genes are created equal. Despite being supported by sequence conservation and expression data, knockout homozygotes of many genes show no visible effects, at least under laboratory conditions. We have identified a set of maize (Zea mays L.) genes which have been the subject of a disproportionate share of publications recorded at MaizeGDB. We manually anchored these ‘‘classical’’ maize genes to gene models in the B73 reference genome, and identified syntenic orthologs in other grass genomes. In addition to proofing the most recent version 2 maize gene models, we show that a subset of these genes, those that …

Dose–Sensitivity, Conserved Non-Coding Sequences, And Duplicate Gene Retention Through Multiple Tetraploidies In The Grasses, James C. Schnable, Brent S. Pedersen, Sabarinath Subramaniam, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Whole genome duplications, or tetraploidies, are an important source of increased gene content. Following whole genome duplication, duplicate copies of many genes are lost from the genome. This loss of genes is biased both in the classes of genes deleted and the subgenome from which they are lost. Many or all classes are genes preferentially retained as duplicate copies are engaged in dose sensitive protein–protein interactions, such that deletion of any one duplicate upsets the status quo of subunit concentrations, and presumably lowers fitness as a result. Transcription factors are also preferentially retained following every whole genome duplications studied. This …

Phylogenetic Evaluation Of Series Delimitations In Section Palmata (Acer, Aceroideae, Sapindaceae) Based On Sequences Of Nuclear And Chloroplast Genes, Jianhua Li

Aliso: A Journal of Systematic and Floristic Botany

Acer section Palmata (Japanese maples) is the largest section within the genus; however, series delimitations within section Palmata have not been evaluated in a phylogenetic context. Both maximum parsimony and maximum likelihood analyses of DNA sequence data of nuclear rDNA ITS and chloroplast genes (ndhF, trnL-trnF, and psbA-trnH) from 23 species of Acer section Palmata show that traditional series do not form individual clades. Results from this study support the most recent taxonomic treatment of Acer that does not recognize any series in section Palmata. Nuclear and chloroplast phylogenies are significantly …

Wood Anatomy Of Family Salvadoraceae From The Indian Subcontinent With Special Reference To The Ultrastructure Of The Vessel Wall, Vishakha Saxena, Sangeeta Gupta

Aliso: A Journal of Systematic and Floristic Botany

The present study describes the wood microstructure of Azima tetracantha, Salvadora oleoides, and S. persica, the members of family Salvadoraceae represented in the Indian Subcontinent. An identification key based on wood anatomical features has been developed for the separation of the species. SEM studies revealed the presence of vesturing in intervessel pits of Salvadora.

Cover Page

Aliso: A Journal of Systematic and Floristic Botany

No abstract provided.

Sinker Structure Of Phoradendron Californicum (Viscaceae) Confounds Its Presumed Close Relationship To Other Acataphyllous Species, Rudolf Schmid, Clyde L. Calvin, Carol A. Wilson

Aliso: A Journal of Systematic and Floristic Botany

Phoradendron is the largest genus of New World mistletoes, with about 250 species in two subgenera, Boreales and Aequatoriales, corresponding, respectively, to northern acataphyllous and southern cataphyllous groups. The typically acataphyllous P. californicum of western North America is controversial because recent phylogenetic work has nested it in the southern cataphyllous clade. Seedling establishment, stem anatomy, and endophytic system structure of this species were studied. Seedling haustorial holdfasts have gland cavities, structures considered absent in the Viscaceae clade of Santalales. The stem epidermis has a thick cuticle, deeply sunken stomata, and branched multicellular trichomes. The stem has an outer cortex …