Digital Commons Network^™

Improving Communication Through Writing, Christopher N. Jacques

The Prairie Naturalist

Greetings GPNSS members! By the time you read this editorial, most of us will be enjoying the summer vacation and all that the Great Plains has to offer. Warmer temperatures, increasing day length, and time in the field are a welcomed change from the seemingly endless grip of “old man” winter (for those of us in the northern Great Plains). Of course, believing that anyone could truly enjoy the clouds of tormenting, biting insects and high humidity across the Great Plains is hard to imagine, in my opinion. There are plenty of summer activities for the outdoor enthusiasts among us, …

Bot Fly Infestation Of Thirteen-Lined Ground Squirrels In Colorado Shortgrass Steppe, Kim Conway, Paul Stapp

The Prairie Naturalist

We studied prevalence of bot fly infestation of thirteen-lined ground squirrels (Ictidomys tridecemlineatus) trapped during 13 years of population monitoring in shrub and grassland habitats in northern Colorado. We also investigated effects of prescribed burning, a common habitat management practice in grasslands, on bot fly prevalence. Infested squirrels were rarely located on shrub sites and during spring (May–Jun) trapping. Across all summers, mean prevalence in grasslands was 7.9% (range: 2.1–23.8%), with years of highest prevalence corresponding to years when the fewest hosts were captured in spring. Infested squirrels had from one to seven warbles, with 46.7% having only one warble. …

Habitat-Related Differences In Necroph- Ilous Species Composition: Implications For Resource Competition, Adrienne L. Conley, Elisabeth K. Jorde, Rachel E. Jorde, Lauren K. Yares, Kenzie K. Lee, Carrie L. Hall, Daniel R. Howard

The Prairie Naturalist

Competition for resources is one of the most important selective factors influencing the expression of life history traits in both plants and animals (Darwin 1859). In grasslands, competition for resources such as nutrients, water, and space often is constrained by stochastic processes (Axelrod 1985). Disturbance factors such as fire, grazing by large herbivores, and fluctuating climatic conditions tend to alter the structure and magnitude of competition for limited resources among grassland communities more frequently than in other ecosystems (Snaydon 1987, van der Maarel 1993). Vertebrate carrion is one important resource used by both plants and animals in grasslands, providing a …

Comparison Of Two Trap Net Designs For Sampling Muskellunge, Brian G. Blackwell, Todd M. Kaufman, Tyrel S. Moos, David O. Lucchesi

The Prairie Naturalist

Sampling adequate numbers of muskellunge (Esox masquinongy) is necessary to evaluate stocking success and to collect information on various population metrics (e.g., growth, condition, relative abundance). However, muskellunge are often difficult to sample with standard fish sampling gears. We collected muskellunge in trap nets of two different designs (large trap nets [1.5-m × 1.8-m frames, 1.5-m diameter hoops, double throated, single 1.5-m × 30.5-m lead and 19-mm knotless mesh] and small trap nets [0.9-m × 1.5-m frames, 0.9-m diameter hoops, single throat, single 0.9-m × 15.2-m lead and 19-mm knotted mesh]. We also estimated abundance of muskellunge (>600 mm …

Comparing Yield Monitors With Weigh Wagons For On-Farm Corn Hybrid Evaluation, Bjorn P. Nelson, Roger Wesley Elmore, Andrew W. Lenssen

Department of Agronomy and Horticulture: Faculty Publications

For many years, on-farm yield evaluations of corn (Zea mays L.) hybrids were done with weigh wagons, handheld moisture testers, and measuring wheels. Today, most combines have continuous flow yield and moisture sensors. Published research results comparing the accuracy of combine-mounted sensor systems with that of weigh wagons are limited for on-farm corn hybrid evaluation. This study examined the accuracy of combine-mounted yield sensors with traditional weigh wagon methodology in on-farm corn hybrid strip trials. Data from combine-mounted sensors for plot weight, moisture percentage, and yield were compared with weigh wagon weight, handheld moisture testers, and calculated yield …

The Role Of Fire In Aspen Ecology And Restoration, Douglas J. Shinneman, Kevin D. Krasnow, Susan K. Mcilroy

Aspen Bibliography

Quaking aspen is generally considered to be a fire-adapted species because it regenerates prolifically after fire, and it can be replaced by more shade-tolerant tree species in the absence of fire. As early-successional aspen stands transition to greater conifer-dominance, they become increasingly fire prone, until fire returns, and aspen again temporarily dominate. While this disturbance-succession cycle is critical to the persistence of aspen on many landscapes, some aspen stands persist on the landscape without fire. The complex role of fire is an important consideration for developing conservation and restoration strategies intended to sustain aspen.

Anthropogenic Nitrogen Deposition Predicts Local Grassland Primary Production Worldwide, Carly J. Stevens, Eric M. Lind, Yann Hautier, W. Stanley Harpole, Elizabeth T. Borer, Eric W. Seabloom, Laura Ladwig, Jonathan D. Bakker, Chengjin Chu, Scott Collins, Kendi F. Davies, Jennifer Firn, Helmut Hillebrand, Kimberly J. La Pierre, Andrew Macdougall, Brett Melbourne, Rebecca L. Mcculley, John Morgan, John L. Orrock, Suzanne M. Prober, Anita C. Risch, Martin Schuetz, Peter D. Wragg

Plant and Soil Sciences Faculty Publications

Humans dominate many important Earth system processes including the nitrogen (N) cycle. Atmospheric N deposition affects fundamental processes such as carbon cycling, climate regulation, and biodiversity, and could result in changes to fundamental Earth system processes such as primary production. Both modelling and experimentation have suggested a role for anthropogenically altered N deposition in increasing productivity, nevertheless, current understanding of the relative strength of N deposition with respect to other controls on production such as edaphic conditions and climate is limited. Here we use an international multiscale data set to show that atmospheric N deposition is positively correlated to aboveground …

Genetic Engineering Online Lessons Improve Teaching And Increase Knowledge And Accepting Attitudes Among Students, Grace Troupe

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Genetic engineering has been used in the production of food in the U.S. for nearly three decades, however, science literacy in genetic engineering among consumers is still low. To address this problem, an online resource called The Journey of a Gene (passel.unl.edu/ge) was created to help incorporate genetic engineering education in high school and college curriculums. Here we report two studies conducted to evaluate the effectiveness of The Journey of a Gene in 1) improving student knowledge and attitudes about genetic engineering and 2) helping teachers increase their knowledge as well as quantity and quality of genetic engineering instruction. In …

The Amaranth (Amaranthus Hypochondriacus) Genome: Genome, Transcriptome And Physical Map Assembly, Jared William Clouse

Theses and Dissertations

Amaranthus hypochondriacus is an emerging pseudo-cereal native to the New World which has garnered increased attention in recent years due to its nutritional quality, in particular its seed protein, and more specifically its high levels of the essential amino acid lysine. It belongs to the Amaranthaceae family, is an ancient paleotetraploid that shows amphidiploid inheritance (2n=32), and has an estimated genome size of 466 Mb. Here we present a high-quality draft genome sequence of the grain amaranth A. hypochondriacus. The genome assembly consisted of 377 Mb in 3,518 scaffolds with an N50 of 371 kb. Repetitive element analysis predicted that …

The Biological Consequences Of Kaolin Geophagia, Deloris Alexander, Desire Richardson, Lakisha Odom, Kara Cromwell, Dejuana Grant, Micoya Myers, Eddy Cadet, Hamid Mahama, Vijaya Rangari, Ralphenia Pace, Ramble Ankumah, Kokoasse Kpomblekou-A, Curtis Fluker

Professional Agricultural Workers Journal

Abstract

Kaolin geophagia is associated with the relief of gastrointestinal distress, but it may also cause adverse health effects on the body. This study was designed to: assess kaolin composition; test if 129SvEv mice would consume kaolin and determine the consequences of consumption; and assess rotational stress modulation of consumption. Thirteen kaolin samples were purchased from Alabama and Georgia stores. Chemical and physical properties were characterized for each sample using a Munsell chart, pH meter, Energy Dispersive Spectroscopy, Transmission Electron Microscopy, Visible Near-InfraRed Spectra, and Inductively Coupled Plasma-Optical Emission Spectrometry. Kaolin was then given to mice as food supplements and …

The Amaranth (Amaranthus Hypochondriacus) Genome: Genome, Transcriptome And Physical Map Assembly, Jared William Clouse

Student Works

Amaranthus hypochondriacus is an emerging pseudo-cereal native to the New World which has garnered increased attention in recent years due to its nutritional quality, in particular its seed protein, and more specifically its high levels of the essential amino acid lysine. It belongs to the Amaranthaceae family, is an ancient paleotetraploid that shows amphidiploid inheritance (2n=32), and has an estimated genome size of 466 Mb. Here we present a high-quality draft genome sequence of the grain amaranth A. hypochondriacus. The genome assembly consisted of 377 Mb in 3,518 scaffolds with an N50 of 371 kb. Repetitive element analysis predicted that …

Notes: Are Land-Use Changes Reflected In Diets Of Mourning Doves (Zenaida Macroura) In Eastern South Dakota, Joshua B. Smith, Troy W. Grovenburg, Matthew A. Perrion, Jason M. Augspurger, Trevor W. Bultje, Anna M. Robinson, Brandi L. Crider, Datta Shubham, Jonathan A. Jenks

The Prairie Naturalist

Food habits of the mourning dove (Zenaida macroura) have been extensively studied in the southern United States (McClure 1943, Korschgen 1958, Carpenter 1971) and consist primarily of vegetable matter throughout their range (Beckwith 1959). Diet studies in several states have indicated agricultural crops, specifically corn and wheat, were the most readily consumed plant seeds (Korshgen 1958, Carpenter 1971). Similarities observed in diets of doves were dependent on the agricultural crops available within the area. For example, in Missouri, some seasonal variability was documented suggesting doves forage based on food availability as much as by food preference (Korschgen 1958). However, in …

Inter- And Intra-Specific Interactions In Germination And Seedling Establishment Of Cheatgrass And Russian Wildrye, Erin K. Espeland

The Prairie Naturalist

Cheatgrass (Bromus tectorum) is an invasive species in the arid and semi-arid west of the USA, and is weedy in disturbed prairie landscapes. Perennial Russian wildrye (Psathyrostachys juncea) limits population growth of cheatgrass, but the mechanism is unclear. I conducted glasshouse and greenhouse experiments to test if intra- and interspecific competitive interactions of seeds and seedlings of cheatgrass and Russian wildrye were different across a geographic soil gradient with different cultivation legacies in eastern Montana, USA. Seed-seed interactions occurred in both species. Cheatgrass and Russian wildrye inhibited one another’s emergence in one edaphic condition in one experiment. Cheatgrass growth was …

West Nile Virus And Ferruginous Hawks (Buteo Regalis) In The Northern Great Plains, Shubham Datta, Jonathan A. Jenks, David E. Knudsen, Kent C. Jensen, Will M. Inselman, Christopher C. Swanson, Troy W. Grovenburg

The Prairie Naturalist

Emerging infectious diseases (EID) present significant threats to the conservation of global biodiversity (Daszak et al. 2000). Evaluating impacts (spatial, temporal and demographic) of EIDs on sensitive and declining wildlife populations is challenging because quantitative information is usually dependent on estimates rather than counts (Wobeser 2007) and mortality rates are seldom quantified with conventional monitoring (Naugle et al. 2005).

West Nile virus (WNv), a mosquito-borne Flavivirus (family Flaviviridae; Komar 2001), was discovered in northwest Uganda in 1937 (Smithburn et al. 1940). First encountered in the western hemisphere in New York in 1999 (Nash et al. 2001), WNv has become enzootic …

Using Otolith Microchemistry To Classify Yellow Perch As Stocked Or Naturally Produced, Andrew K. Carlson, Matthew J. Ward, Brian D.S Graeb

The Prairie Naturalist

Fisheries managers routinely use stocking to supplement fish populations (Schramm and Piper 1995, Fisher 1996). Stocking eyed-eggs offers substantial cost savings compared to stocking fry and fingerlings (PFBC 2011); however, traditional stocking evaluation using oxytetracycline (OTC) marking of otoliths is ineffective for eyed-eggs of some species (e.g., yellow perch, [Perca fla- vescens]). Thus, there is a need for additional approaches to be able to classify fish as stocked or naturally produced. Fish otoliths are paired calcified structures in the inner ear that permanently deposit trace elements in proportion to water column concentrations (Campana 1999, Campana et al. 2000). Coupled with …

Mala Lā’Au Lapa’Au: Preserving The Hawaiian ‘Āina And Mo’Omehue, Sandra Fogg

Senior Honors Projects

The study of medicinal plants in the western world tends to focus on the isolation and elucidation of natural products that have bioactive characteristics and potential for pharmaceutical formulation. However, the utilization of medicinal plants in cultures that still practice ancient medicine, such as Hawai’i and other Pacific Island nations, involves the use of whole plant parts in conjunction with spiritual rituals to heal illnesses and ailments. In order to gather a different perspective of the use of plants in medicine, a diverse investigation of “Lā’au Lapa’au,” or the Hawaiian art of healing through the use of plants and spiritual …

Photosynthetic Performance And Anti-Oxidative Response Of Cornus Controversa Seedlings Under Cadmium And Lead Stress, Xinyu Huang, Yonglei Jiang, Xiaomao Cheng, Lilan Deng, Xuncheng Liu

Faculty Publications

The photosynthetic efficiency of Cornus controversa leaves was decreased significantly under Cd treatment while it was not affected by Pb exposure. Cd decreased while Pb treatment increased the chlorophyll contents of Cornus controversa leaves. Furthermore, the peroxidase (GPX) activities were decreased after Cd treatment while elevated by Pb exposure in Cornus controvera seedlings. In addition, both Cd and Pb exposures increased the malondialdehyde (MDA) and proline contents and elevated the superoxide dismutase (SOD) activities of Cornus controvera seedlings. Collectively, these results indicated that Cornus controversa may be more tolerant to Pb than Cd toxicity. This finding will contribute to the …

Comparative Analysis Of Pesticide Effects On Natural Enemies In Western Orchards: A Synthesis Of Laboratory Bioassay Data, Nicholas J. Mills, Elizabeth H. Beers, Peter W. Shearer, Thomas R. Unruh, Kaushalya G. Amarasekare

Agricultural and Environmental Sciences Faculty Research

Pesticides are commonly used for pest management in apple, pear and walnut orchards in the western U.S. and may disrupt biological control of secondary pests in these crops. A comparative analysis was made of results obtained from a series of laboratory bioassays of acute mortality and life table response experiments to estimate lethal and sublethal effects of eight pesticides on seven natural enemy species through use of stage-structured population models. Even though a number of the pesticides tested were reduced-risk products, all of them with the exception of copper plus mancozeb and chlorantraniliprole, caused more than 80% acute mortality of …

Predictive Modeling Of Oxygen Transmission Through Micro-Perforations For Packaging Applications, Ayman Abdellatief, Bruce A. Welt, Jason Butler, Eric Mclamore, Arthur Teixeira, Sanjay Shukla

Journal of Applied Packaging Research

Methods for creating precise perforations in respiring produce packaging are being increasingly adopted. Knowledge of oxygen transfer through perforated packaging and oxygen distribution in packages is necessary for successful packaging design of fresh produce. An approach to modeling perforated packaging performance was developed using a cylindrical chamber with precision perforations using Fick’s second law. The model was simulated using two techniques including Finite Element Method (FEM) using commercially available software and Finite Volume Method (FVM) through programming. Perforations were approximated as a source term in the second method. Both simulation techniques showed trends similar to experimental data.

Biological Control Of Agrilus Liragus Through Entomopathogenic Fungi, John Watkins

Journal of Undergraduate Research

This project was funded with the intent that possible biological controls could be found to control the population explosions of bark boring beetles. We hypothesized that due to the prevalence of beetle outbreaks in the West, we would find enough Agrilus liragus specimens to culture native entomopathogenic fungi. We hoped to sequence that fungi and hypothesized that there would be new species of pathogenic fungi that is specific to Agrilus liragus. Through our fieldwork we were not able to find sufficient numbers of Agrilus liragus to accomplish these goals. What we did find were high levels of the tree …

Biological Control Of Agrilus Liragus Through Entomopathogenic Fungi, John Watkins

Journal of Undergraduate Research

This project was funded with the intent that possible biological controls could be found to control the population explosions of bark boring beetles. We hypothesized that due to the prevalence of beetle outbreaks in the West, we would find enough Agrilus liragus specimens to culture native entomopathogenic fungi. We hoped to sequence that fungi and hypothesized that there would be new species of pathogenic fungi that is specific to Agrilus liragus. Through our fieldwork we were not able to find sufficient numbers of Agrilus liragus to accomplish these goals. What we did find were high levels of the tree …

Silencing Of The Oshp Gene For Increasing Abiotic Stress Tolerance In Rice, Virginia Ann Boyett

Theses and Dissertations

This thesis project involves increasing the tolerance to abiotic stresses in rice through silencing the OsHP gene, a homolog of Arabidopsis AtClb, which has been identified as a negative regulator of response to abiotic stresses. A fragment of the OsHP gene was cloned into a Gateway entry vector pENTR/D-TOPO, and a silencing construct was created with the Gateway destination vector pANDA through an LR clonase reaction. Embryogenic callus tissue was generated from seed of the rice cultivars `Nipponbare' and `LaGrue'. Biolistic and Agrobacterium-mediated transformation procedures were used to transfer the pANDA_OsHP silencing construct into the rice callus tissue. Transformed calli …

Background Paper On Systematics, Invasive Species Advisory Committee

National Invasive Species Council

The Invasive Species Advisory Committee (ISAC) makes recommendations to the Federal government agencies that have an invasive species portfolio. This systematics recommendation strives to motivate action in the agencies that have been identified in the Situation Report as the agencies with systematics capabilities in the Federal government.

The USDA Agricultural Research Service (ARS) and the Smithsonian Institution are repositories of a large amount of the systematics collections and human capabilities for systematics essential work on invasive species. Conducting the Survey of their systematics capabilities and needs is urgent. The Survey will describe actions in research, specimen-based collections, a biodiversity informatics …

Expressing And Characterizing Mechanosensitive Channels In Xenopus Oocytes, Grigory Maksaev, Elizabeth S. Haswell

Biology Faculty Research

The oocytes of the African clawed frog (Xenopus laevis) comprise one of the most widely used membrane protein expression systems. While frequently used for studies of transporters and ion channels, the application of this system to the study of mechanosensitive ion channels has been overlooked, perhaps due to a relative abundance of native expression systems. Recent advances, however, have illustrated the advantages of the oocyte system for studying plant and bacterial mechanosensitive channels. Here we describe in detail the methods used for heterologous expression and characterization of bacterial and plant mechanosensitive channels in Xenopus oocytes.

Restoring Semi-Arid Thornscrub Forests: Seeding Growth And Survival In Response To Shelter Tubes, Grass-Specific Herbicide, And Herbivore Exclosures, Krysten Noelle Dick

Theses and Dissertations - UTB/UTPA

This thesis is a compilation of two studies, which I have called ‘chapters.’ The first chapter, “Restoring Semi-Arid Thornscrub Forests: Seedling Growth and Survival in Response to Shelter Tubes, Grass-Specific Herbicide, and Herbivore Exclosures,” was a large study involving multiple techniques used to improve revegetation success, and the second chapter, “Shelter Tube Effects on Microclimate and Seedling Growth in Semi-arid Thornscrub Forests,” focused on the use of shelter tubes in semi-arid forest revegetation. These studies were concurrent evaluations of restoration efforts in thornscrub forests of South Texas. Revegetation is a common effort used to restore forest ecosystems that have been …

Variation In Trembling Aspen And White Spruce Wood Quality Grown In Mixed And Single Species Stands In The Boreal Mixedwood Forest, Francis De Araujo, James F. Hart, Shawn D. Mansfield

Aspen Bibliography

The Canadian boreal forest is largely represented by mixed wood forests of white spruce (Picea glauca (Moench) Voss) and trembling aspen (Populus tremuloides Michx). In this study, a total of 300 trees originating from three sites composed of trembling aspen and white spruce with varying compositions were investigated for wood quality traits: one site was composed mainly of aspen, one mainly of spruce and a third was a mixed site. Four wood quality traits were examined: wood density, microfibril angle (MFA), fibre characteristics, and cell wall chemistry. Social classes were also determined for each site in an attempt …

Anaerobic Detoxification Of Acetic Acid In A Thermophilic Ethanologen, A Joe Shaw, Bethany B. Miller, Stephen R. Rogers, William Robert Kenealy, Alex Meola, Ashwini Bhandiwad, W Ryan Sillers, Indraneel Shikhare, David Hogsett, Christopher Herring

Dartmouth Scholarship

The liberation of acetate from hemicellulose negatively impacts fermentations of cellulosic biomass, limiting the concentrations of substrate that can be effectively processed. Solvent-producing bacteria have the capacity to convert acetate to the less toxic product acetone, but to the best of our knowledge, this trait has not been transferred to an organism that produces ethanol at high yield. We have engineered a five-step metabolic pathway to convert acetic acid to acetone in the thermophilic anaerobe Thermoanaerobacterium saccharolyticum.

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Fishing For A Sustainable Future: Aquaponics As A Method Of Food Production, Richard Ramsundar

Student Theses 2015-Present

This thesis compares and explains the advantages aquaponics farming has over modern industrial intensive farming. Through a comparison natural capital usage, conservation, recycling and cost, the thesis advocates for the expansion of aquaponics usage in urban settings. The thesis also explains the history of intensive farming and aquaponics in America, the science of how aquaponics operates, the economic and environmental costs of modern intensive farming versus aquaponics farming, and the social implications of aquaponics. Lastly, I propose a policy that reallocates farm subsidies by modifying the Farm Bill. Then I propose policies that support creating a new standard of farm …

E151 (Sym15), A Pleiotropic Mutant Of Pea (Pisum Sativum L.), Displays Low Nodule Number, Enhanced Mycorrhizae, Delayed Lateral Root Emergence, And High Root Cytokinin Levels, James M.C. Jones, Lindsey Clairmont, Emily S. Macdonald, Catherine A. Weiner, R.J. Neil Emery, Frédérique C. Guinel

Biology Faculty Publications

In legumes, the formation of rhizobial and mycorrhizal root symbioses is a highly regulated process which requires close communication between plant and microorganism. Plant mutants that have difficulties establishing symbioses are valuable tools for unravelling the mechanisms by which these symbioses are formed and regulated. Here E151, a mutant of Pisum sativum cv. Sparkle, was examined to characterize its root growth and symbiotic defects. The symbioses in terms of colonization intensity, functionality of micro-symbionts, and organ dominance were compared between the mutant and wild type. The endogenous cytokinin (CK) and abscisic acid (ABA) levels and the effect of the exogenous …

Size-Fractionated Relationships Between Phytoplankton Production And Biomass, Luke Auman Bassett

Senior Theses

Phytoplankton are the autotrophic foundation of almost all marine ecosystems.

The flow of energy through an ecosystem is largely dependent how productivity moves through organisms of various sizes. For this reason, numerous studies have set out to quantify the respective contributions of these size-fractions to biomass and rates of primary production. This is done through field measurements of production or through mathematic models that infer production contributions from the easier field measured contributions to biomass. However, the accuracy of this method has been called into question. Can contributions to biomass really be used to accurately interpret contributions to production?

The …