Digital Commons Network^™

A World Of Cobenefits: Solving The Global Nitrogen Challenge, Benjamin Z. Houlton, Maya Almaraz, Viney Aneja, Amy T. Austin, Edith Bai, Kenneth G. Cassman, Jana E. Compton, Eric A. Davidson, Jan Willem Erisman, James N. Galloway, Baojing Gu, Guolin Yao, Luiz A. Martinelli, Kate Scow, William H. Schlesinger, Thomas P. Tomich, Chao Wang, Xin Zhang

Department of Agronomy and Horticulture: Faculty Publications

Nitrogen is a critical component of the economy, food security, and planetary health. Many of the world's sustainability targets hinge on global nitrogen solutions, which, in turn, contribute lasting benefits for (i) world hunger; (ii) soil, air, and water quality; (iii) climate change mitigation; and (iv) biodiversity conservation. Balancing the projected rise in agricultural nitrogen demands while achieving these 21st century ideals will require policies to coordinate solutions among technologies, consumer choice, and socioeconomic transformation.

The Mitochondrial Genome Of Eleusine Indica And Characterization Of Gene Content Within Poaceae, Nathan D. Hall, Hui Zhang, Jeffrey P. Mower, Joseph Scott Mcelroy, Leslie R. Goertzen

Department of Agronomy and Horticulture: Faculty Publications

Plant mitochondrial (mt) genome assembly provides baseline data on size, structure, and gene content, but resolving the sequence of these large and complex organelle genomes remains challenging due to fragmentation, frequent recombination, and transfers of DNA from neighboring plastids. Themt genome for Eleusine indica (Poaceae: goosegrass) is comprehensibly analyzed here, providing key reference data for an economically significant invasive species that is also the maternal parent of the allotetraploid crop Finger millet (Eleusine coracana). The assembled E. indica genome contains 33 protein coding genes, 6 rRNA subunits, 24 tRNA, 8 large repetitive regions 15 kb of transposable elements across a …

United States Midwest Soil And Weather Conditions Influence Anaerobic Potentially Mineralizable Nitrogen, Jason D. Clark, Kristen S. Veum, Fabian G. Fernandez, James J. Camberato, Paul R. Carter, Richard B. Ferguson, David W. Franzen, Daniel E. Kaiser, Newell R. Kitchen, Carrie A. M. Laboski, Emerson D. Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan

Department of Agronomy and Horticulture: Faculty Publications

Nitrogen provided to crops through mineralization is an important factor in N management guidelines. Understanding of the interactive effects of soil and weather conditions on N mineralization needs to be improved. Relationships between anaerobic potentially mineralizable N (PMN_an) and soil and weather conditions were evaluated under the contrasting climates of eight US Midwestern states. Soil was sampled (0–30 cm) for PMN_an analysis before pre-plant N application (PP_0N) and at the V5 development stage from the pre-plant 0 (V5_0N) and 180 kg N ha−1 (V5_180N) rates and incubated for 7, 14, and …

Forage Quality Of Cool Season Perennial Grass Horse Pastures In The Transition Zone, Annmarie Christine Riley

Theses and Dissertations--Plant and Soil Sciences

Cool season perennial grasses are the foundation of equine nutrition in the transition zone. The objective of this study was to evaluate forage quality using ADF, NDF, IVTDMD, CP, WSC, and ESC and changes in vegetative swards seasonally, diurnally, across species (Kentucky bluegrass, tall fescue, orchardgrass, and perennial ryegrass) and cultivar. This study was conducted in 2015 and 2017 and plots were maintained vegetatively with two to four week mowing. Morning and afternoon sample collection occurred monthly during the growing season. Samples were flash frozen; freeze dried, ground, and scanned using Near Infrared Reflectance Spectroscopy (NIRS) to predict forage quality. …

Breeding For Tomato Resistance To Spider Mite Tetranychus Urticae Koch (Acari: Tetranychidae), Ammar Sami Al-Bayati

Theses and Dissertations--Plant and Soil Sciences

Cultivated tomato plants are extremely susceptible to the two-spotted spider mite Tetranychus urticae Koch. Selection for pest resistance is usually a crucial step required to achieve successful genetic resistance transfer from wild into cultivated tomato genotypes. S. habrochaites LA2329, a wild relative of tomato, is highly resistant to arthropods. Its resistance has been attributed to the presence of a high density of type IV and type VI trichomes and abundant production of 7-epi-zingiberene, a sesquiterpene hydrocarbon. The interspecific backcross hybrids used in this research were derived from the cross between the wild relative tomato, S. habrochaites LA2329, and the cultivated …

Foraging Preferences Of Barnacle Geese On Endophytic Tall And Red Fescues, Tuuli-Marjaana Koski, Kari Saikkonen, Tero Klemola, Marjo Helander

Human–Wildlife Interactions

Many grasses (Poaceae) have symbiotic fungal endophytes, which affect livestock by producing unpalatable or harmful secondary compounds. Less is known about the repelling effects of fungal endophytes on avian grazers despite potential wildlife management implications. Herbivorous goose (Branta spp.) species may become a nuisance in recreational use areas via fecal littering. Planting these areas with grasses that avian grazers avoid may help mitigate this damage. In 2016, we studied the foraging preference of the barnacle geese (B. leucopsis) with endophytic (E+) or endophyte-free (E-) red fescue (Festuca rubra) and/or tall fescue (Schedonorus phoenix) in …

Genetic Diversity And Agronomic Performance Of Slovenian Landraces Of Proso Millet (Panicum Miliaceum L.), Marko Flajsman, Natasa Stajner, Darja Kocjan Acko

Turkish Journal of Botany

Proso millet (Panicum miliaceum L.) has many favored nutritional and agronomic traits, which makes it appropriate for cultivation and consumption all around the world. Genomic resources for proso millet are still very limited but the set of genomic data is improving. In this study, we genotyped six Slovenian landraces of proso millet (P. miliaceum L.) along with one Slovene autochthonous cultivar, Son?ek. The chosen set of 11 SSR markers showed that there is low overall heterozygosity (0.561) among Slovenian landraces of proso millet. However, we were able to determine distinct groups on the dendrogram for different landraces and the cultivar …

Natural And Anthropic Forest Fragments Have Distinct Ecological Behavior Due To Their Different Origin And Landscape Context, Cleber Souza, Polyanne Coelho, Paola Ferreira Santos, Gisele Cristina De Oliveira Menino, Jean Morel, Aline Moreira, Rubens Manoel Dos Santos

Turkish Journal of Botany

We tested the hypothesis that plant populations in natural fragments have distinct ecological behavior in relation to anthropic fragments. We selected the species Myrcia splendens (SW.) DC. in 2 forest fragments located in southeastern Brazil that present different origins and landscape contexts. The natural fragment originates from landscape relief variations and is inserted in a native grassland matrix, while the anthropic fragment originates from fragmentation due to area conversion and is inserted in an agricultural matrix. We established transects covering an area from one border to the other in each fragment, and we established subunits of 400 m2 within them. …

Growing South Dakota (Winter 2019), College Of Agriculture, Food And Environmental Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

This is issue contains the South Dakota Agricultural Experiment Station 2018 Annual Report, and the SDSU Extension 2018 Annual Report.

[Page] 2 Setting Into role as Dean
[Page] 4 Raven Precision Ag Center Groundbreaking Ceremony
[Page] 10 Collaborating for Research-Based Solutions
[Page] 12 From the SDSU Extension Director
[Page] 14 Empowering South Dakotans Through Training and Certifications
[Page] 18 Mental Health and Opioid Education
[Page] 21 Science of Agriculture
[Page] 23 Community Gardens Bring Hope to Pine Ridge Indian Reservation
[Page] 26 Energize! Conference
[Page} 28 Disaster Preparedness Training
[Page] 30 Bush Foundation Change Network
[Page] 32 SDSU to Participate …

More Than "Push" And "Pull"? Plant-Soil Feedbacks Of Maize Companion Cropping Increase Chemical Plant Defenses Against Herbivores, Daniel M. Mutyambai, Ethan Bass, Tim Luttermoser, Katja Poveda, Charles A.O. Midega, Zeyaur R. Khan, André Kessler

All Peer-Reviewed Publications

Plants can alter nutritional availability, structure, and chemistry of the soil they grow in. These soil changes can positively or negatively influence the growth and metabolism of other plants that co-occur or grow later in the conditioned soil. Plant-soil feedbacks could affect community interactions and dynamics but also be applied in sustainable agriculture to promote plant growth and resistance to pests. In this study, we use a maize companion cropping system, commonly known as "push-pull," as a model to investigate soil-mediated effects of functional biodiversity, on maize plant growth, and resistance against insect herbivores. We grew maize in soils collected …

Ectomycorrhizal Fungal Community Assembly On Seedlings Of A Neotropical Monodominant Tree, Carolyn Delevich

Cal Poly Humboldt theses and projects

Formation of ectomycorrhizae may facilitate early seedling survival of ectomycorrhizal tree species due to enhanced nutrient acquisition. This could be especially important in heavily shaded understories of tropical monodominant forests where host plant photosynthetic capacity is limited. Little information is available on ectomycorrhizal (ECM) fungal colonization or community development of monodominant seedling cohorts, which have high survival rates. Following a 2016 mast seeding event, we sequentially measured percent colonization and species composition of ECM fungi on live and recently dead seedlings of the tropical monodominant tree Dicymbe corymbosa. We also compared seedling ECM fungi to those of nearby adult …

Context Is Everything: An Investigation Of Spanish River Carbonatite And Its Effects On Soil-Plant-Microorganism Systems, James Mc Jones

Theses and Dissertations (Comprehensive)

With growing concerns about agricultural sustainability and food security, the use of rock fertilizers and agrominerals is receiving renewed interest. A wide variety of geological resources have been proposed as crop nutrient sources, with silicate rocks the predominant focus. Carbonatite rocks are known to weather more readily than silicate rocks; yet, they have received relatively little attention as it is thought their high Ca and Mg contents hinder effective nutrient release. However, there is strong evidence that the nutrients within carbonatite rocks are easily accessible to plants, and that these rocks have noticable effects on crop plant growth. Here I …

Evaluating The Potential Of Methyl Jasmonate Application As An Agricultural Practice On Phytochemicals In Brassica Vegetables: Sensory Quality, Cooking, And Cost-Benefit Analysis, Yu-Chun Chiu

Graduate Theses, Dissertations, and Problem Reports (ETD)

In the United States, Brassica vegetables, including broccoli (Brassica oleracea var. italica) and kale (Brassica oleracea var. acephala or Brassicae napus var. pabularia), are widely consumed and are easily accessible in farmer’s market or grocery stores with increasing interest of their health-promoting properties. For example, the consumption of broccoli has been associated with anti-cancer activity in in vitro and in vivo trails due to the high content of phytochemicals, minerals, vitamins, and fibers. Application of methyl jasmonate (MeJA) has been reported to enhance the potential health-promoting compounds in Brassica vegetables, glucosinolates (GS), especially indolyl GS neoglucobrassicin …

Genetic Regulation Of The Elicitation Of Glyceollin Biosynthesis In Soybean, Md. Asraful Jahan

Graduate Theses, Dissertations, and Problem Reports (ETD)

Glyceollin phytoalexins are the pathogen-elicited defense metabolites that belong to the isoflavonoid family of molecules of soybean (Glycine max L. Merr). Phytophthora root and stem rot of soybean caused by Phytophthora sojae is a destructive disease throughout the soybean-growing regions worldwide causing devastating economic damages (globally $1-2 billion and over $250 million in the USA) every year. Engineering soybean plants that produce higher levels of glyceollins could confer resistance against this pathogen. Glyceollins also show anticancer and neuroprotective activities in mammals, therefore they are important for agriculture and medical research. Firstly, we were interested in understanding how biotic and …

Investigation Of Mechanisms Involved In Germination Enhancement Of Wheat (Triticum Aestivum) By Cold Plasma: Effects On Seed Surface Chemistry And Characteristics, Agata Los, Dana Ziuzina, Daniela Boehm, Patrick J. Cullen, Paula Bourke

Articles

Recent reports indicate that atmospheric cold plasma (ACP) treatment of seeds can enhance their germination, however, the mechanisms of action are not yet entirely clear. In the present work, we report on the effects of plasma treatment on wheat seed germination and seedling growth. Additionally, changes in the surface chemistry and characteristics of the wheat seeds exposed to plasma were investigated. Treatments of 30–60 s significantly enhanced the germination rate and showed positive effects on seedling growth. ACP resulted in changes of seed surface and chemical characteristics including water uptake and contact angle values. Changes in seed pH and total …

Proximate Composition And Anti-Nutritional Factors Of Fava-Bean (Vicia Faba), Green-Pea And Yellow-Pea (Pisum Sativum) Flour, Kim A. Millar, Eimear Gallagher, Roisin Burke, Sinead Mccarthy, Catherine Barry-Ryan

Articles

Pulse grains were identified as a key resource for food innovation during the International Year of the Pulse (IYP), 2016. Pulse flour offers a sustainable source of plant protein for innovation in protein enriched cereal based foods. Fava-bean (Vicia faba), green- and yellow-pea (Pisum sativum) flour were analysed for proximate composition, minerals, amino acids, phenolic content, phytic acid and trypsin inhibitory activity. Fava-bean flour had the highest protein content (28 g/100 g), while green-pea flour had the highest total dietary fibre content (15 g/100 g). All three flours contained essential amino acids in adequate quantity, highlighting them as a source …

Three Sister Crops: Understanding American Indian Agricultural Practices Of Corn, Beans And Squash, Sara Colombe, Madhav P. Nepal, Larry B. Browning, Matthew L. Miller, P. Troy White

iLEARN Teaching Resources

American Indians have practiced an inter-planting system to produce corn, beans, and squash, for generations. These crops are known as the “Three Sisters”. In this lesson developed for secondary agriscience curriculum, students will understand the past, current and future production practices of the three important crops. Students will also apply their knowledge to understand the crop selection process and relate to the changing environment.

Understory Community Assembly Following Wildfire In Boreal Forests: Shift From Stochasticity To Competitive Exclusion And Environmental Filtering, Bo Liu, Han Y. H. Chen, Jian Yang

Forestry and Natural Resources Faculty Publications

Understory vegetation accounts for the majority of plant species diversity and serves as a driver of overstory succession and nutrient cycling in boreal forest ecosystems. However, investigations of the underlying assembly processes of understory vegetation associated with stand development following a wildfire disturbance are rare, particularly in Eurasian boreal forests. In this study, we measured the phylogenetic and functional diversity and trait dispersions of understory communities and tested how these patterns changed with stand age in the Great Xing'an Mountains of Northeastern China. Contrary to our expectation, we found that understory functional traits were phylogenetically convergent. We found that random …

Analisis Kandungan Logam Berat Aluminium (Al), Dan Timbal (Pb) Pada Buah Jambu Biji Varietas Kristal (Psidium Guajava L.) Dan Tanah Di Desa Bumiaji, Kota Batu, Hidayati Karamina, Ariani Trisna Murti, Tri Mudjoko

Jurnal Kultivasi

Bumiaji merupakan kawasan wisata yang terletak di Kota Batu. Dengan suhu mencapai 20oC menyebabkan Bumiaji menjadi tempat pengembangan kawasan yang cocok untuk penanaman tanaman hortikultura contohnya jambu biji varietas kristal. Budidaya jambu biji varietas kristal tidak lepas dengan pemeliharaan tanaman dengan cara pengaplikasian pupuk organik maupun anorganik dan pestisida dalam jumlah banyak dan dalam jangka waktu yang panjang. Usaha-usaha peningkatan hasil produksi di atas ternyata dapat memberikan dampak kurang baik bagi lingkungan sekitar khususnya tanah. Adapun tujuan dari penelitian ini adalah mengetahui seberapa besar jumlah logam berat yang berada pada tanah dan buah jambu biji varietas kristal. Penelitian ini menggunakan …

Rhizosphere Microbial Communities Of Spartina Alternifloa And Juncus Roemerianus From Restored And Natural Tidal Marshes On Deer Island, Mississippi, Olga Mavrodi, Carina M. Jung, Jed O. Eberly, Samuel Hendry, Sanchirmaa Namijilsuren, Patrick D. Biber, Karl J. Indest, Dmitri V. Mavrodi

Faculty Publications

The U. S. Gulf of Mexico is experiencing a dramatic increase in tidal marsh restoration actions, which involves planting coastal areas with smooth cordgrass (Spartina alterniflora) and black needlerush (Juncus roemerianus) for erosion control and to provide habitat for fish and wildlife. It can take decades for sedimentary cycles in restored marshes to approach reference conditions, and the contribution of the sediment microbial communities to these processes is poorly elucidated. In this study, we addressed this gap by comparing rhizosphere microbiomes of S. alterniflora and J. roemerianus from two restored marshes and a natural reference marsh located at Deer Island, …

Peningkatan Produktivitas Tanaman Kedelai Kultivar Anjasmoro Asal Benih Terdeteriorasi Dengan Kompos Trichoderma Dan Bokashi, Sumadi, Denny Sobardini Sobarna, Pujawati Suryatmana, Meddy Rachmadi, Erni Suminar

Jurnal Kultivasi

Trichoderma spp merupakan golongan fungi yang bersifat antipatogen, khususnya layu kecambah, sedangkan bokashi merupakan kompos yang diperkaya dengan beberapa mikroba yang bermanfaat bagi pertumbuhan tanaman.Tulisan ini merupakan rangkuman penelitian pot menggunakan kompos Trichoderma spp sebagai pelapis benih terdeteriorasi disertai bokashi kotoran hewan yang dilakukan pada tanah lahan kering dan tanah sawah pada tahun 2014 dan 2017. Percobaan pertama membandingkan efektivitas beberapa agen hayati sebagai pelapis benih pengaruhnya terhadap vigor benih dan hasil tanaman. Hasil percobaan menunjukkan penggunaan kompos Trichoderma hasilnya lebih baik dibandingkan agen hayati lainnya. Hasil percobaan selanjutnya menunjukkan bahwa pelapisan benih dengan 1 sampai 3 g kompos Trichoderma …

Biochemical, Physiological And Phenological Genetic Analysis In Common Bean (Phaseolus Vulgaris L.) Under Salt Stress, Yacine Torche, Matthew Blair, Chougui Saida

Agricultural and Environmental Sciences Faculty Research

Salinity is one of the most important abiotic stresses affecting agricultural productivity. The present study investigated combining abilities, heterosis and heritability estimates of common bean under salinity conditions for biochemical, physiological and phenological traits using a half-diallel cross. The salinity stress treatments were applied during all the vegetative cycle. Genetic analysis revealed highly significant genotypic variations between the four parents and their six hybrids, indicating a genetic variability and possibility of genetic improvement using such genetic material of common bean for salinity tolerance. Both general (GCA) and specific (SCA) combining abilities were highly significant for all the studied traits under …

Defining The Genetic Regulation Of Appressorium Formation In Cercospora Zeae-Maydis, Hazel Apiyo Buyu

Graduate Theses and Dissertations

Cercospora zeae-maydis is one of the primary pathogens associated with gray leaf spot, one of the most damaging foliar diseases of maize in the world. Gray leaf spot can be managed to some extent by cultural practices and fungicide applications. To infect maize, C. zeae-maydis grows towards stomata and forms infectious structures, termed appressoria, over stomatal pores. Prior research on the pathogen revealed that appressorium formation is crucial for foliar infection. Although several genes involved in pathogenesis have been identified in C. zeae-maydis, the molecular regulation of appressorium formation in this pathogen is poorly understood. Specifically, how the fungus senses …

Responses Of Ornamental Grass And Grass-Like Plants To Saline Water Irrigation, Youping Sun, Alyssa Lanae Palmer

Plants, Soils, and Climate Faculty Publications

Ornamental grasses are popular in urban landscapes in Utah and the Intermountain West United States, one of the driest and fastest growing regions in the United States. This experiment evaluated the responses of five ornamental grass species [blue grama (Bouteloua gracilis), indian sea oats (Chasmanthium latifolium), ‘Blue Dune’ sand ryegrass (Leymus arenarius), pink muhly grass (Muhlenbergia capillaris), ‘Foxtrot’ fountain grass (Pennisetum alopecuroides)] and two ornamental grasslike species [fox sedge (Carex vulpinoidea), common rush (Juncus effusus)] to saline irrigation water in a greenhouse. Plants were irrigated weekly …

Effects Of Calcium Fertilization On Growth, Yield, And Nutrient Content Of Hydroponically Grown Radish Microgreens, Cady C. Goble

Graduate Theses/Dissertations

Radish microgreens were grown in a hydroponic wicking system and subjected to a range of calcium chloride (Ca) solutions to evaluate growth, yield, and mineral content. A solution range of 0 to 160 mM Ca was applied to determine upper limits of Ca fertilization. Solutions above 20 mM Ca showed toxic effects to germination and growth, while 5 and 10 mM Ca resulted in the greatest percent of shoots that grew to a desired size for harvest (%H), as well as greater average hypocotyl length per plant (HL) and cotyledon surface area per plant (CSA). For subsequent experiments, Ca solution …

Effects Of Irrigation On Forage Growth Rates On Rotational Grazing Dairies, Zachary Davis

Graduate Theses/Dissertations

The amount and timing of rainfall in Missouri can be very irregular. This causes issues for producers of agronomic products in the state who rely on forages for income. The most sensible approach to the problem is the use of irrigation. But there is little useful information to reference when implementing this management decision. By studying three different styles of irrigation (center pivot, spider, and k-line) on 4 species of forages native to Missouri (alfalfa, crabgrass, perennial ryegrass, and tall fescue/clover), this study provides valuable insight as to the cost and benefit of irrigation. The main goal is to produce …

Weed Control And Management For Vegetable Soybeans In Arkansas, Seth Bernard Abugho

Graduate Theses and Dissertations

Vegetable soybean [Glycine max (L.) Merr.], known as edamame, needs weed management tools. Releasing locally adapted edamame soybean varieties and registering herbicides are necessary for successful production and expanding the edamame industry. This research aimed to 1) identify herbicides labeled for grain soybean for potential use on edamame; 2) evaluate differential tolerance of edamame soybean varieties to selected grain soybean herbicides; and 3) identify a feasible edamame-based crop rotation system. For objective 1, 26 herbicide treatments were tested on AVS-4002 edamame including preplant (PPL), preemergence (PRE) and postemergence (POST) herbicides labeled for grain soybean. Preplant herbicides caused 9 to 28% …

Linkage Mapping For Soybean (Glycine Max) Flood Tolerance, Wade Stiles Hummer

Graduate Theses and Dissertations

Flood tolerance in soybean (Glycine max) is not a well-characterized trait, yet flooding damage is second only to drought stress in terms of yield reduction. The objectives of this study were to determine genetic variation for flooding tolerance in two populations of soybean recombinant inbred lines (RILs) and to identify and confirm flood tolerant QTL. Population A (WHA) consisted of 111 RILs derived from the cross 5002T by 91210-350 and Population B (WHB) consisted of 79 RILs from the cross RA-452 by Osage. Experiments were conducted at the Rice Research and Extension Center (RREC) near Stuttgart, AR in 2015 and …

Evaluation Of Soybean Maturity Group And Planting Date In A Soybean-Rice Rotation On Overall Crop Productivity, Carrie Ortel

Graduate Theses and Dissertations

Little is known about the effects of soybean (Glycine max L.) management techniques on soil-nitrogen (N) credit development and its impact on the subsequent rice (Oryza sativa L.) crop’s success. This study was conducted to determine how soybean maturity group (MG) and planting date effect overall soybean productivity and its influence on the following rice crop. Various soybean planting dates (optimum and late) and MGs (3.5, 4.7, 5.4, and 5.6) were grown and followed in rotation with a rice crop. Six rates of pre-flood fertilizer-N (0, 44, 89, 134, 179, 224 kg N ha-1) were applied to the rice crop. …

Grazing Strategy Effects On Utilization, Animal Performance, Aboveground Production, Species Composition, And Soil Properties On Nebraska Sandhills Meadow, Aaron Shropshire

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Ultrahigh stocking density (a.k.a., mob grazing) is proposed as a management tool that results in greater harvest efficiency, animal performance, aboveground plant production, species richness, and soil carbon content. The study objective was to determine grazing treatment, haying, or non-defoliated control effects on forage utilization, aboveground production, animal performance, and soil properties. In 2010, 25 ha of Sandhills meadow were divided into 2 replications of 3 grazing, a hay, and control treatment. Grazing treatments were a 120-pasture rotation with one grazing cycle (mob), a 4-pasture rotation with one cycle (4PR1), and a 4-pasture rotation with two cycles (4PR2) at stocking …