Digital Commons Network^™

Uav-Assisted Data Dissemination Based On Network Coding In Vehicular Networks, Shidong Huang, Chuanhe Huang, Yabo Yin, Dongfang Wu, M. Wasim Abbas Ashraf, Bin Fu

Computer Science Faculty Publications

Efficient and emergency data dissemination service in vehicular networks (VN) is very important in some situations, such as earthquakes, maritime rescue, and serious traffic accidents. Data loss frequently occurs in the data transition due to the unreliability of the wireless channel and there are no enough available UAVs providing data dissemination service for the large disaster areas. UAV with an adjustable active antenna can be used in light of the situation. However, data dissemination assisted by UAV with the adjustable active antenna needs corresponding effective data dissemination framework. A UAV-assisted data dissemination method based on network coding is proposed. First, …

A Proposed Framework For The Development And Qualitative Evaluation Of West Nile Virus Models And Their Application To Local Public Health Decision-Making, Alexander C. Keyel, Morgan E. Gorris, Ilia Rochlin, Johnny A. Uelmen, Luis F. Chaves, Gabriel L. Hamer, Imelda K. Moise, Marta Shocket, A Marm Kilpatrick, Nicholas B. Defelice, Justin K. Davis, Eliza Little, Patrick Irwin, Andrew J. Tyre, Kelly Helm Smith, Chris L. Fredregill, Oliver Elison Timm, Karen M. Holcomb, Michael C. Wimberly, Matthew J. Ward, Christopher M. Barker, Charlotte G. Rhodes, Rebecca L. Smith

School of Natural Resources: Faculty Publications

West Nile virus(WNV) is a globally distributed mosquito-borne virus of great public health concern. The number of WNV human cases and mosquito infection patterns vary in space and time. Many statistical models have been developed to understand and predict WNV geographic and temporal dynamics. However, these modeling efforts have been disjointed with little model comparison and inconsistent validation. In this paper, we describe a framework to unify and standardize WNV modeling efforts nationwide. WNV risk, detection, or warning models for this review were solicited from active research groups working in different regions of the United States. A total of 13 …

Comprehensive Characterization Of Covid-19 Patients With Repeatedly Positive Sars-Cov-2 Tests Using A Large Us Electronic Health Record Database, Xiao Dong, Yujia Zhou, Xiao-Ou Shu, Elmer V Bernstam, Rebecca Stern, David M Aronoff, Hua Xu, Loren Lipworth

Faculty, Staff and Student Publications

In the absence of genome sequencing, two positive molecular tests for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) separated by negative tests, prolonged time, and symptom resolution remain the best surrogate measure of possible reinfection. Using a large electronic health record database, we characterized clinical and testing data for 23 patients with repeatedly positive SARS-CoV-2 PCR test results ≥60 days apart, separated by ≥2 consecutive negative test results. The prevalence of chronic medical conditions, symptoms, and severe outcomes related to coronavirus disease 19 (COVID-19) illness were ascertained. The median age of patients was 64.5 years, 40% were Black, and 39% …

Scaup Depredation On Arkansas Baitfish And Sportfish Aquaculture, Stephen A. Clements, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Lesser scaup (Aythya affinis) and greater scaup (A. marila), hereafter scaup, consume a variety of aquatic invertebrates, plants, and occasionally small fish. Scaup have foraged on commercial aquaculture farms in the southern United States for decades. However, the types, abundance, and rate of fish exploitation by scaup on baitfish and sportfish farms are not well documented. Thus, information is needed to understand how fish and other foods influence scaup use of aquatic resources, and any potential economic effects of depredation of fish. From November–March in winters 2016–2017 and 2017–2018, we conducted 1,458 pond surveys to …

Estimation Of Conditional Power For Cluster-Randomized Trials With Interval-Censored Endpoints, Kaitlyn Cook, Rui Wang

Statistical and Data Sciences: Faculty Publications

Cluster-randomized trials (CRTs) of infectious disease preventions often yield correlated, interval-censored data: dependencies may exist between observations from the same cluster, and event occurrence may be assessed only at intermittent study visits. This data structure must be accounted for when conducting interim monitoring and futility assessment for CRTs. In this article, we propose a flexible framework for conditional power estimation when outcomes are correlated and interval-censored. Under the assumption that the survival times follow a shared frailty model, we first characterize the correspondence between the marginal and cluster-conditional survival functions, and then use this relationship to semiparametrically estimate the cluster-specific …

Control Strategies To Contain Sars-Cov-2 In A Data-Driven Sir Model For The State Of Michigan, Norma Ortiz-Robinson, Cyrus Foster-Bey

Open Access Publishing Support Funded Articles

In this paper we use a data driven SIR model to capture the dynamics of the spread of the SARS-CoV-2 pandemic in the state of Michigan. The model is then used to formulate an optimal control problem in which we perform sensitivity analysis involving vaccine efficacy and capacity, and vaccination willingness by the public. We obtain numerical approximations for best strategies for vaccination, treatment, and social distancing measures and their effect on the spread of the virus.

Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay

United States Department of Agriculture Wildlife Services: Staff Publications

In recent years, small unmanned aircraft systems (sUAS) have been used widely to monitor animals because of their customizability, ease of operating, ability to access difficult to navigate places, and potential to minimize disturbance to animals. Automatic identification and classification of animals through images acquired using a sUAS may solve critical problems such as monitoring large areas with high vehicle traffic for animals to prevent collisions, such as animal-aircraft collisions on airports. In this research we demonstrate automated identification of four animal species using deep learning animal classification models trained on sUAS collected images. We used a sUAS mounted with …

Spatial Variation In Direct And Indirect Contact Rates At The Wildlife-Livestock Interface For Informing Disease Management, Anni Yang, Raoul K. Boughton, Ryan S. Miller, Bethany Wight, Wesley M. Anderson, James C. Beasley, Kurt C. Vercauteren, Kim M. Pepin, George Wittemyer

United States Department of Agriculture Wildlife Services: Staff Publications

Little is known about disease transmission relevant contact rates at the wildlife-livestock interface and the factors shaping them. Indirect contact via shared resources is thought to be important but remains unquantified in most systems, making it challenging to evaluate the impact of livestock management practices on contact networks. Free-ranging wild pigs (Sus scrofa) in North America are an invasive, socially-structured species with an expanding distribution that pose a threat to livestock health given their potential to transmit numerous livestock diseases, such as pseudorabies, brucellosis, trichinellosis, and echinococcosis, among many others. Our objective in this study was to quantify …

Plague Exposure In Mammalian Wildlife Across The Western United States, Sarah N. Bevins, Jeffrey C. Chandler, Nicole Barrett, Brandon S. Schmit, Gerald W. Wiscomb, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Plague is caused by a bacterial pathogen (Yersinia pestis) that can infect a wide range of mammal species, but its presence in wildlife is often underappreciated. Using a large-scale data set (n = 44,857) that details the extent of Y. pestis exposure in wildlife, we document exposure in 18 wildlife species, including coyotes (Canis latrans), bobcats (Lynx rufus), and black bears (Ursus americanus). Evidence of plague activity is widespread, with seropositive animals detected in every western state in the contiguous United States. Pathogen monitoring systems in wildlife that are both large scale …

Data-Driven Management—A Dynamic Occupancy Approach To Enhanced Rabies Surveillance Prioritization, Amy J. Davis, Jordana D. Kirby, Richard B. Chipman, Kathleen M. Nelson, Amy T. Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

Rabies lyssavirus (RABV) is enzootic in raccoons across the eastern United States. Intensive management of RABV by oral rabies vaccination (ORV) has prevented its spread westward and shown evidence of local elimination in raccoon populations of the northeastern US. The USDA, Wildlife Services, National Rabies Management Program (NRMP) collaborates with other agencies to implement broad-scale ORV and conducts extensive monitoring to measure the effectiveness of the management. Enhanced Rabies Surveillance (ERS) was initiated during 2005 and updated in 2016 to direct surveillance efforts toward higher-value specimens by assigning points to different methods of encountering specimens for collection (strange-acting, roadkill, surveillance-trapped, …

Prevalence, Awareness, And Control Of Hypertension Among Bangladeshi Adults: An Analysis Of Demographic And Health Survey 2017-18, Gulam Muhammed Al Kibria, Rajat Das Gupta Ph.D., Jannatun Nayeem

Faculty Publications

Background

The prevalence of hypertension is increasing in Bangladesh, however, few recent studies investigated the proportion of people and factors associated with prevalence, awareness, and control of this condition in this country. This study investigated these among Bangladeshi adults.

Methods

Using Bangladesh Demographic and Health Survey 2017–18 data, a cross-sectional study was conducted. Multilevel logistic regression analysis was employed after descriptive analysis and prevalence estimation.

Results

Among 12,926 persons (mean age: 40 years, 57% women), the prevalence of hypertension was 27.4% (n = 3551), it was 28.4 and 26.2% among females and males, respectively. Among hypertensive people, about 42.4% …

Editorial Board

Karbala International Journal of Modern Science

No abstract provided.

Spatial Modelling For Cholera Incidence Rates In Morogoro Municipality, Tanzania, Caroline Ngereza, Rosalia S. Katapa, Ali R. Mniachi

Tanzania Journal of Science

Spatial modelling was conducted to examine community factors associated with cholera incidence rates in Morogoro Municipality. The study employed both secondary (cholera cases) and primary (geographic coordinates of community risk factors) data. Spatial lag model was applied in examining association between the variables. All wards of Morogoro Municipality were considered in the study to capture their variations because cholera cases have a tendency to be clustered. Results indicated that market density, distance to the market and distance to the dumpster are significant factors associated with cholera incidence rates in the wards (p < 0.05). Geographically weighted Poisson model was used to show the variations of those factors between the wards in Municipality. A statistically significant positive association of cholera incidence rates; and market density was only found in Mazimbu ward (p < 0.05) and distance from the community to the dumpster was found in Kihonda, Kingolwira, Bigwa, Kichangani, Kilakala and Boma wards (p < 0.001) and some wards at the centre of the municipality which are Mji Mkuu and Kingo (p < 0.05). A statistically significant negative association of cholera incidence rates and distance from the centre of the community to the market was found in Kihonda, Kingolwira and Kichangani (p < 0.001) and Bigwa wards (p < 0.05). Therefore, measures taken to control and prevent cholera disease should base on the variations of the risk factors found in the Municipal wards.  Keywords:    Cholera incidence rate, Spatial lag regression model, Community risk factor, Geographically weighted Poisson model

University Sustainability Initiatives Impact On The Surrounding Areas Economy, Sara Kathleen Saucedo

Student Theses and Dissertations

The preservation of the environment depends on sustainability initiatives. Universities influence policy through their impact on their surrounding communities. Universities should, therefore, place a higher priority on campus sustainability efforts. This study examines how universities’ sustainability initiatives impact local area economy. Using data reported by various governmental agencies, I construct a sustainability index based on university initiatives in energy, green buildings, food waste, permaculture, water use, recycling, sustainability council, and AASHE. I model the impact of universities on the local economy using this index and other institutional characteristics. I define the local area economy as effects on poverty rates, unemployment, …

Digitalization In The Port Industry From The Perspectives Of Bibliometric Analysis, Xuyuan Sun

World Maritime University Dissertations

No abstract provided.

Chagas Disease In Hiv-Infected Patients: It’S Time To Consider The Diagnosis, Melissa Nolan Ph.D., Mph, Natasha S. Hochberg

Faculty Publications

No abstract provided.

Inhibition Of Aminoglycoside 6’-N-Acetyltransferase Type Ib [Aac(6′)-Ib]: Structure-Activity Relationship Of Substituted Pyrrolidine Pentamine Derivatives As Inhibitors, Kenneth Rocha, Jesus Magallon, Craig Reeves, Kimberly Phan, Peter Vu, Crista L. Oakley-Havens, Stella Kwan, Maria S. Ramirez, Travis Lavoi, Haley Donow, Prem Chapagain, Radleigh Santos, Clemencia Pinilla, Marc A. Giulianotti, Marcelo E. Tolmasky

Mathematics Faculty Articles

The aminoglycoside 6′-N-acetyltransferase type Ib [AAC(6′)-Ib] is a common cause of resistance to amikacin and other aminoglycosides in Gram-negatives. Utilization of mixture-based combinatorial libraries and application of the positional scanning strategy identified an inhibitor of AAC(6′)-Ib. This inhibitor’s chemical structure consists of a pyrrolidine pentamine scaffold substituted at four locations (R1, R3, R4, and R5). The substituents are two S-phenyl (R1 and R4), an S-hydroxymethyl (R3), and a 3-phenylbutyl (R5) groups. Another location, R2, does not have a substitution, but it is named because its stereochemistry was modified in some compounds utilized in this study. Structure-activity …

Invader Removal Triggers Competitive Release In A Threatened Avian Predator, J. David Wiens, Katie M. Dugger, J. Mark Higley, Damon B. Lesmeister, Alan B. Franklin, Keith A. Hamm, Gary C. White, Krista E. Dilione, David C. Simon, Robin R. Bown, Peter C. Carlson, Charles B. Yackulic, James D. Nichols, James E. Hines, Raymond J. Davis, David W. Lamphear, Christopher Mccafferty, Trent L. Mcdonald, Stan G. Sovern

United States Department of Agriculture Wildlife Services: Staff Publications

Changes in the distribution and abundance of invasive species can have far-reaching ecological consequences. Programs to control invaders are common but gauging the effectiveness of such programs using carefully controlled, large-scale field experiments is rare, especially at higher trophic levels. Experimental manipulations coupled with long-term demographic monitoring can reveal the mechanistic underpinnings of interspecific competition among apex predators and suggest mitigation options for invasive species. We used a large-scale before-after control-impact removal experiment to investigate the effects of an invasive competitor, the barred owl (Strix varia), on the population dynamics of an iconic old-forest native species, the northern spotted owl …

Diminishing Opportunities For Sustainability Of Coastal Cities In The Anthropocene: A Review, John W. Day, Joel D. Gunn, Joseph Robert Burger

Biology Faculty Publications

The world is urbanizing most rapidly in tropical to sub-temperate areas and in coastal zones. Climate change along with other global change forcings will diminish the opportunities for sustainability of cities, especially in coastal areas in low-income countries. Climate forcings include global temperature and heatwave increases that are expanding the equatorial tropical belt, sea-level rise, an increase in the frequency of the most intense tropical cyclones, both increases and decreases in freshwater inputs to coastal zones, and increasingly severe extreme precipitation events, droughts, freshwater shortages, heat waves, and wildfires. Current climate impacts are already strongly influencing natural and human systems. …

Synthesis And Biological Evaluation Of Pyrazolo[1,5-A]Pyrimidines And (4-Hydroxy-6-Trifluoromethylpyrimidin-2-Yl) Guanidines, Justin Dave Singleton

Theses and Dissertations

A microwave reactor was used to synthesize a series of novel 3,6-disubstituted or 3-substituted pyrazolo[1,5-a]pyrimidines in a total of 1 hour reaction time over 3 steps. The products were obtained in good to excellent yields (34-92%, ave = 52%) using a straightforward synthesis starting with the reaction of dimethylformamide-dimethylacetal with commercially available aryl acetonitriles (120C, 20 min). This was followed by treatment with H2NNH2 • HBr (120C, 20 min), and then reacted with either 1,1,3,3-tetramethoxypropane or a 2-aryl-substituted malondialdehydes (120C, 20 min). The resulting product was either collected on a sintered glass funnel or purified via column chromatography. The compounds …

Investigation Into Bacterial Impairment Of Greene And Polk County Water Systems, John C. Kincaid

Graduate Theses/Dissertations

Bacterial impairment of water systems is a major issue facing mankind. Bacteria that are introduced into a system have the potential to cause harmful diseases to wildlife and humans. In Greene and Polk counties, many water systems have become bacterially impaired over the years. Despite this, little is known about the contamination of known harmful bacteria in this region. To address this issue, I investigated the presence of known human pathogens across water systems in these two counties, many of which have displayed high levels of E. coli and fecal indicator microorganisms over many years. I used a high-throughput sequencing …

Innovative Computational Methods For Pharmaceutical Problem Solving A Review Part Ii: Serious Gaming, Heather R. Campbell, Robert A. Lodder

Pharmaceutical Sciences Faculty Publications

Serious gaming has begun to take a foothold in pharmaceutical problem-solving. Companies such as Akili's Interactive are seeing success in the form of positive clinical trial results and FDA approval of digital therapeutics. Academic researchers have begun exploring novel uses for serious gaming in the way of protein design and more with promising results. This paper provides a review of such topics in addition to topics of game repurposing- repurposing a game originally intended for entertainment into a serious game-such as Minecraft and America's Army. Reviewing these topics this paper shows the utility of serious gaming as a tool for …

Nicarbazin As An Oral Contraceptive In Eared Doves, Lourdes Olivera, Silvia Pereyra, Georgget Banchero, Guillermo Tellechea, Jorge Sawchik, Michael L. Avery, Ethel Rodríguez

United States Department of Agriculture Wildlife Services: Staff Publications

Eared doves (Zenaida auriculata) are responsible for substantial losses in cereal and oil crops as well as in dairy and feedlot production in the southern cone of South America. Various strategies have been shown to be effective in reducing damage at the farm scale, but in some scenarios, it is necessary to also incorporate population control methods due to excessive bird population size. An alternative approach to reduce pest bird populations is the use of contraceptive methods, minimizing the impact on the environment and non-target populations. Nicarbazin is registered in the United States as a contraceptive for Branta …

Empirical Bayes Estimates For The Reproduction Number Of Epidemics, Elijah Lee Hight

Theses and Dissertations

Epidemic outbreaks can be modelled as a branching process in which the total progeny or outbreak size, follows a Borel-Tanner (BT) distribution. Following a procedure described by Liang (2009), we construct empirical Bayes estimates for when the initial number of infected is a specified value r. Following the construction, we then simulate data and perform a numerical study, assuming BT distribution for the parameter θ, the reproduction number, with an initial outbreak size of three. Simulation results indicate that the empirical estimator suffers from “jumpiness.” We then proceed to monotonize the empirical estimate via a method outlined by Houwelingen (1979). …

Avian Influenza A Virus Susceptibility, Infection, Transmission, And Antibody Kinetics In European Starlings, Jeremy W. Ellis, J. Jeffrey Root, Loredana M. Mccurdy, Kevin T. Bentler, Nicole L. Barrett, Kaci K. Vandalen, Katherine L. Dirsmith, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAVs) pose risks to public, agricultural, and wildlife health. Bridge hosts are spillover hosts that share habitat with both maintenance hosts (e.g., mallards) and target hosts (e.g., poultry). We conducted a comprehensive assessment of European starlings (Sturnus vulgaris), a common visitor to both urban and agricultural environments, to assess whether this species might act as a potential maintenance or bridge host for IAVs. First, we experimentally inoculated starlings with a wild bird IAV to investigate susceptibility and replication kinetics. Next, we evaluated whether IAV might spill over to starlings from sharing resources with a …

Mesopredator Frugivory Has No Effect On Seed Viability And Emergence Under Experimental Conditions, John P. Draper, Trisha B. Atwood, Noelle G. Beckman, Karin M. Kettenring, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Members of the order Carnivora are a unique and important seed disperser who consume and deposit undamaged seeds while providing regular long-distance seed dispersal opportunities. Some members of Carnivora, such as coyotes (Canis latrans), are undergoing range expansions which may help the plant species they consume colonize new locations or replace dispersal services provided by recently extirpated species. In this study, we evaluated aspects of the seed dispersal effectiveness of coyotes and gut passage time to determine the potential dispersal distances for three commonly consumed and commonly occurring plant species (Amelanchier alnifolia, Celtis ehrenbergiana, and Juniperus osteosperma). We also investigated …

On A Stochastic Model Of Epidemics, Rachel Prather

Master's Theses

This thesis examines a stochastic model of epidemics initially proposed and studied by Norman T.J. Bailey [1]. We discuss some issues with Bailey's stochastic model and argue that it may not be a viable theoretical platform for a more general epidemic model. A possible alternative approach to the solution of Bailey's stochastic model and stochastic modeling is proposed as well. Regrettably, any further study on those proposals will have to be discussed elsewhere due to a time constraint.

Computational Techniques For Elucidating Plant-Pathogen Interactions: A Case Study On Citrus-Hlb Interactome, Cristian D. Loaiza

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Citrus fruit industry in the United States has been affected during the last two decades because of the outbreak of the citrus greening disease, also known as Huanglongbing (HLB). Many people and organizations are working in therapeutics to help mitigate the impact of this disease, unfortunately there is not a cure yet. There are many mechanisms that needs to be understood about this disease, especially at the molecular level. Not only HLB, but many other infectious diseases are controlled by the interaction of proteins from the host (Citrus in this case) and from the pathogen that causes the disease. …

Nanoscale Assembly Of Dectin-1 And Its Glucan Ligand In Immunocyte Membranes And Pathogen Cell Walls, Akram Etemadi Amin

Physics & Astronomy ETDs

Candida spp. pathogens continue to be a significant health care burden with high mortality and exceeding enormous healthcare costs. Candida infection range varies from dermatological infection to more severe bloodstream infection in debilitated patients. Due to this, research dedicated to understanding biophysical interactions between Candida species and the host’s immune cells is essential. The C-type lectin’s (CtLs) are known to bind to Candida cell walls and play a crucial role in downstream immune signaling. It is known that β-glucans, the highly immunogenic polysaccharide in Candida’s cell wall, are mostly masked underneath a layer of mannosylated proteins. The amount of …

A Multidimensional Welfare Status Of Leprosy Patients Living In A Suburban Area, Yunia Irawati, Sri Linuwih Sw Menaldi, Melinda Harini, Luh Karunia Wahyuni, Wanarani Alwin, Astari Dwiranti, Adhityawarman Menaldi, Sonny Tirta Luzanil, Qaishum Matsurah, Dadun ., Rico Kurniawan, Ida Ruwaida, Gunawan Wicaksono, Muhammad Hidayat Sahid, Febrina Rahmayanti, Florentina Priscilia, Anis Fitriana, Tri Rahayu, Made Susiyanti, Gitalisa Andayani, Anna Puspitasari Bani, Hisar Daniel, Yeni Dwi Lestari

ASEAN Journal of Community Engagement

Leprosy has a high incidence of physical complications that will impact directly the physiological, economic, and social status of patients. Indonesia has a high burden of the disease, and several leprosy settlements are still spread in the country. Neglasari Village, Sitanala, Tangerang serves as one of the places of residence of people who have had leprosy. A health service initiative known as Identifikasi Tanda-Tanda Mata, Ekstremitas, dan Kulit pada Kusta (KATAMATAKU) was launched as a collaboration of health services among multi-departments (ophthalmology, dermatovenereology, and medical rehabilitation). Sitanala has a relatively high incidence of people who have had leprosy with disabilities …