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Artificial Intelligence Through Young Eyes: A Study Of Students’ Perspectives And Experiences With Artificial Intelligence In Education, Chad Preston Salyer May 2025

Artificial Intelligence Through Young Eyes: A Study Of Students’ Perspectives And Experiences With Artificial Intelligence In Education, Chad Preston Salyer

Ed.D. Dissertations

Artificial intelligence was an emergent and powerful new force in education. The public release of ChatGPT 3.0 in 2022 transformed learning for many students. This phenomenological qualitative study sought to record and analyze student’s perspectives on the influence of artificial intelligence on their learning routines. This study collected data through surveys and interviews with undergraduate students, analyzing patterns of artificial intelligence usage, perceived benefits, and challenges. The findings revealed that most students used artificial intelligence as a primary learning tool and that those students viewed artificial intelligence as beneficial for personalized learning and skill development. However, concerns about over-reliance on …


Assessment Of Lake Salvador Shoreline Dynamics To Support Restoration Of Submerged Aquatic Vegetation In Jean Lafitte National Historical Park And Preserve, Louisiana, Lydia V. Dipaola May 2025

Assessment Of Lake Salvador Shoreline Dynamics To Support Restoration Of Submerged Aquatic Vegetation In Jean Lafitte National Historical Park And Preserve, Louisiana, Lydia V. Dipaola

LSU New Orleans Theses and Dissertations

High wave energy degrades shoreline habitat between Lake Salvador and Jean Lafitte National Historical Park and Preserve (JELA), Louisiana. JELA constructed a northern breakwater in 2004, and a southern breakwater in 2024 to protect the shoreline and promote restoration of submerged aquatic vegetation (SAV). This study analyzes Sentinel-2 imagery to quantify coastal loss along the JELA-Lake Salvador using the Change Polygon Approach, assessing annual, cumulative and major storm event-associated shoreline changes for January 2017-2025. SAV cover, nekton diversity, wave energy, and turbidity were measured before-and-after southern breakwater construction to monitor ecological and environmental outcomes. The JELA-Lake Salvador shoreline has lost …


Toward Robust Semantic Segmentation In Levee Infrastructure Monitoring: Enhancing Accuracy With High-Fidelity Synthetic Data And Ensemble Learning, Padam Jung Thapa May 2025

Toward Robust Semantic Segmentation In Levee Infrastructure Monitoring: Enhancing Accuracy With High-Fidelity Synthetic Data And Ensemble Learning, Padam Jung Thapa

LSU New Orleans Theses and Dissertations

Abstract: Levees serve as critical flood protection structures, but failures due to inadequate maintenance and extreme water pressures have led to devastating events such as Hurricane Katrina. Manual inspections are slow, labor-intensive, and prone to human error, necessitating the development of automated solutions. This study proposes an AI-driven framework for levee inspection utilizing deep learning-based semantic segmentation to detect rutting and enhance the identification of sand boils. To address dataset limitations, high-fidelity synthetic images are generated using DreamBooth for fine-tuning, while ControlNet adds structural constraints to enhance realism and consistency. A semi-automatic convex hull annotation technique enhances labeling efficiency, and …


Controls On Nutrient And Sediment Export In A Non-Perennial Agricultural Stream, Kathleen Cutting May 2025

Controls On Nutrient And Sediment Export In A Non-Perennial Agricultural Stream, Kathleen Cutting

Graduate Theses and Dissertations

Climate change is expected to increase flow variability and intermittency in streams, changing the magnitude and timing nutrient and sediment delivery. This may exacerbate water quality issues in agricultural landscapes, where nutrient and sediment inputs are often elevated. Elevated nutrients can drive eutrophication in downstream waterways, and excess sediment loss can decrease primary productivity. Non-perennial headwater streams are particularly vulnerable to the impacts of climate change and agriculture as they serve as key sites for nutrient cycling at the terrestrial-aquatic interface. Despite their importance, the interactive effects of agriculture and stream intermittency, as well as unpaved roads in rural watersheds …


Atomic Level Characterization For The Transport Cycle Conformational Pathways Of Multidrug Resistance Protein 1 (Mrp1), Samuel Wamwere Mwatha May 2025

Atomic Level Characterization For The Transport Cycle Conformational Pathways Of Multidrug Resistance Protein 1 (Mrp1), Samuel Wamwere Mwatha

Graduate Theses and Dissertations

The multidrug resistance-associated protein 1 (MRP1/ABCC1) is an ATP-binding cassette (ABC) transporter that mediates the cellular efflux of endogenous and xenobiotic substrates, including therapeutic drugs. Its overexpression is a major contributor to multidrug resistance in cancer, which tends to result in negative clinical results. Even with considerable progress made in structural biology, the intricate details of how membrane lipid composition affects the conformational changes and functional switches of MRP1 still lack explanation.

This thesis employs long-timescale, all-atom molecular dynamics (MD) simulations to study the influence of various lipids on MRP1 lipid bilayer environments. Both inward-facing and outward-facing conformations of MRP1 …


Privacy-Aware Ai-Based Agricultural Monitoring Using Internet Of Drones, Md Benozir Hossain May 2025

Privacy-Aware Ai-Based Agricultural Monitoring Using Internet Of Drones, Md Benozir Hossain

Honors Theses

Artificial Intelligence (AI) has become a vital tool for agricultural farming. AI-based image processing models utilizing different machine learning (ML) algorithms and deep learning (DL) offer advanced functionalities in disease detection, yield estimation, land use, etc. This thesis examines AI-driven techniques utilizing Convolutional Neural Networks (CNN) with the addition of Federated Learning (FL) to analyze satellite and drone images for agricultural insights, especially in detecting Cotton diseases. The AI models improve agricultural farming in many ways, such as using data to make critical decisions, reducing labor costs, pest infestations, etc. Moreover, these models allow farmers to minimize yield losses by …


Chemistry Education At The University Of Southern Mississippi Through Computation And Active Learning Methods, Sadie Pitre May 2025

Chemistry Education At The University Of Southern Mississippi Through Computation And Active Learning Methods, Sadie Pitre

Honors Theses

Education is one of the pillars of society. It evolves alongside scientific progress, shaping how students learn and engage with complex topics. The incorporation of new educational standards at The University of Southern Mississippi (USM) was implemented in two parts: through computational chemistry laboratory exercises for teaching laboratories and through the synthesis of organic molecules for research projects in an upper-level spectroscopy class. The goal of these projects is to improve learning of abstract and/or complex topics beyond the teaching methods traditionally utilized in the undergraduate laboratory and in the classroom.

Computational chemistry, which uses theoretical calculations to model molecular …


Synthetic Efforts Towards An Analog Of Ly426965, Macy Sproles May 2025

Synthetic Efforts Towards An Analog Of Ly426965, Macy Sproles

Honors Theses

The 5-hydroxytryptamine1A (5-HT1A) receptor is a key target in the treatment of various neuropsychiatric conditions, and the development of selective antagonists offers promising therapeutic potential.24 This study aimed to develop a synthetic analog of LY426965, a selective 5-HT1A receptor antagonist. The synthetic route was initiated from dimethyl-2-phenylmalonate, employing pig liver esterase (PLE) as an enantioselective biocatalyst to achieve regioselective hydrolysis of one ester moiety in the malonic diester intermediate.17 Through a series of stereochemically controlled transformations, a new intermediate was successfully synthesized. Although the target molecule was not obtained, a new compound was synthesized …


The Effect Of Non-Profit Organizations On The Passage Of Climate Change Legislation In Connecticut, John-Henry Burke May 2025

The Effect Of Non-Profit Organizations On The Passage Of Climate Change Legislation In Connecticut, John-Henry Burke

Honors Scholar Theses

Connecticut has a long history of climate action. In this study, I looked into the effect that non-governmental organizations have on the passage of climate change legislation in Connecticut. Eighteen different climate policy stakeholders, including legislatures, non-governmental organization (NGO) staff members, youth activists and state employees were interviewed to gain their perspective on how non-profits forward climate initiatives. I found that non-profit organizations do have a significant impact on the passage of climate change legislation in Connecticut by working as providers of information to legislators and mobilizers of constituents. This impact can be limited by various political factors.


Maggot Mass Effect On The Development And Survival Of Forensic Blow Flies, Akomavo Fabrice Gbenonsi May 2025

Maggot Mass Effect On The Development And Survival Of Forensic Blow Flies, Akomavo Fabrice Gbenonsi

School of Natural Resources: Dissertations, Theses, and Student Research

Forensic entomology scientists use blow flies' developing patterns to estimate the postmortem interval (PMI). However, larval aggregations produce metabolic heat, resulting in complex microclimates that may change growth timetables. This study investigates how larval density and associated temperature changes affect the development and survival of two forensically essential blow fly species, Lucilia sericata and Calliphora vicina.

This study examined how larval density and associated thermal profiles affect the development of both blow fly species. Using a split-plot design, we tested four larval densities at 25°C and 30°C, with temperature gradients measured via thermocouple at four mass positions three times …


Assessing Spatial And Temporal Variation In Photoprotective Responses Of Deciduous And Evergreen Tree Canopies With Leaf Spectroscopy, Alexander Piper May 2025

Assessing Spatial And Temporal Variation In Photoprotective Responses Of Deciduous And Evergreen Tree Canopies With Leaf Spectroscopy, Alexander Piper

School of Natural Resources: Dissertations, Theses, and Student Research

Environmental conditions frequently prevent carbon fixation by plants, leading to the absorption of excess light that can damage photosynthetic machinery if not dissipated. To do so, plants utilize several photoprotective mechanisms, some detectable remotely using Photochemical Reflectance Index (PRI). Two components of PRI correspond to the facultative engagement of the xanthophyll cycle (ΔPRI) and constitutive changes in xanthophyll pigment pool sizes (PRI0), representing distinct mechanisms regulating shorter and longer-term photoprotection, respectively. Our understanding of interspecific and intraspecific variation in these mechanisms is limited, primarily because PRI components are often not clearly distinguished. This study aimed to assess the variation in …


Assessment Of Sampling Gears For Bigheaded Carp In Mid-Order Prairie Rivers In Nebraska, Brett M. Anderson May 2025

Assessment Of Sampling Gears For Bigheaded Carp In Mid-Order Prairie Rivers In Nebraska, Brett M. Anderson

School of Natural Resources: Dissertations, Theses, and Student Research

Silver Carp Hypophthalmichthys molitrix and Bighead Carp H. nobilis (collectively bigheaded carp) have invaded tributaries to the Missouri River and Platte River in Nebraska, USA. Information pertaining to efficient sampling protocols for assessing bigheaded carp populations as well as benefiting removal efforts is needed. Herding is a method used to increase the capture efficiency and detection probability of adult bigheaded carp by simultaneously using active and passive sampling gears. During June-July 2023, four herding techniques were assessed regarding their ability to elicit directional movement past an enclosure gate. The combination of sound and electrofishing resulted in the highest mean …


Sustainable Fashion Identified: An Exploration And Education Of Sustainable Apparel, Michaela M. Lentsch May 2025

Sustainable Fashion Identified: An Exploration And Education Of Sustainable Apparel, Michaela M. Lentsch

Department of Textiles, Merchandising and Fashion Design: Dissertations, Theses, and Student Research

Consumers today are searching for and are loyal to companies who support their views and concerns about sustainability. The fashion industry is one of the biggest industries in the world, but one that has many environmental and sustainability concerns. Fortunately, there are many ways the fashion industry and consumers can take steps to make sustainable change and better the planet. Small fashion businesses and boutiques can make positive changes to operate and provide sustainable options and services for customers which can help the planet become more sustainable.

Through this manuscript, an assortment of sustainable methods and practices will be shared …


Understanding Automation From A Computer Science Perspective, Matthew Donsig May 2025

Understanding Automation From A Computer Science Perspective, Matthew Donsig

Honors Program: Senior Projects (Public)

This thesis looks into automation and analyzes its benefits and problems. It begins with an explanation of a capstone project, automating the UNL State Museum’s reservation system. Problems of automation are presented in unsuccessful attempts and some pitfalls of automation. Next this thesis turns to an examination of artificial intelligence in automation. Along with that, we look at bias in automation and how people can bias automated tools or be biased by them. Turning successful examples of automation and then automation in manufacturing shows its benefits. Automation creates new jobs or changes work as much as it eliminates positions. At …


Improved Snow Distribution Estimates Using A Rapid-Response Lidar And Photogrammetry System, Naheem Idowu Adebisi May 2025

Improved Snow Distribution Estimates Using A Rapid-Response Lidar And Photogrammetry System, Naheem Idowu Adebisi

Boise State University Theses and Dissertations

Snow plays a critical role in global hydrology, climate systems, and human activities, particularly in mountainous regions where it is a primary source of freshwater, influences the energy balance, and impacts mobility and commerce. Despite its importance, accurately mapping and predicting snow distribution remains a major challenge due to the complex spatial and temporal variability of snowpack and the lack of an ideal observation system. This dissertation aims to advance our monitoring capability, understanding, and prediction capacity of snow distribution using Light Detection and Ranging (LiDAR) and photogrammetry techniques.

In chapter 2, I discussed the high-resolution LiDAR-derived datasets of multiple …


Resilience Webtool: Engaging Community Partners To Humanize Data For Use In Local Resilience Planning In Valley County, Idaho, Sabrina Akther May 2025

Resilience Webtool: Engaging Community Partners To Humanize Data For Use In Local Resilience Planning In Valley County, Idaho, Sabrina Akther

Boise State University Theses and Dissertations

Advancements in technology have made hazard data increasingly available. However, officials in rural communities with limited resources often face challenges in accessing, interpreting, and applying these data to assess vulnerabilities and plan future development. Furthermore, when hazard data is not paired with relevant population and infrastructure, data vulnerability assessments become increasingly difficult. To address this challenge, this project aims to co-create a web tool with decision makers in Valley County, Idaho following a user-centered design approach, consolidating hazards, social vulnerability, and infrastructure data to help local officials with risk management, decision-making, and resilience planning. The project started with listening sessions, …


Cybersecurity's Pr Problem: The Education Gap Fueling Mfa Aversion, Tyler M. Stafford, Catherine Dwyer May 2025

Cybersecurity's Pr Problem: The Education Gap Fueling Mfa Aversion, Tyler M. Stafford, Catherine Dwyer

Honors College Theses

Through surveying individuals with no professional experience in cybersecurity, this study examines the relationship between awareness and education surrounding security controls and end users’ willingness to adopt them. The findings reveal a strong link between understanding the effectiveness of these controls and user comfort, indicating that as end users’ understanding increases, so does their willingness to use the controls. Working in both identity and access management (IAM) and human risk management, I observed what appeared to be a connection between security education and positive attitudes toward security more broadly, but found limited research statistically linking the two. This study’s findings …


Bpa Adsorption On Microplastics In Different Chemical Conditions, Addison Zehren May 2025

Bpa Adsorption On Microplastics In Different Chemical Conditions, Addison Zehren

University Honors Program Senior Projects

Microplastics (plastic particles < 5 mm in size) are increasingly seen as a health and environmental issue, both for their direct effects when ingested by living organisms and for their ability to adsorb and concentrate other pollutants. Current water treatment processes do not adequately remove microplastics from municipal water supplies, so a thorough understanding of how microplastics affect water quality is needed. The objective of this study is to evaluate the effects of certain water quality parameters on the ability of polystyrene microplastics (PS MPs) to adsorb Bisphenol A (BPA). BPA is an endocrine disruptor (chemically like estrogen) used in plastics which can be released into the environment and act as a water pollutant. Water quality chemical parameters investigated were chloride, nitrate, phosphate, and copper ions. Concentrations of each solute were selected based upon Environmental Protection Agency (EPA) guidelines and previous results obtained from testing Chicago River water samples. A constant amount of PS MPs and BPA were added to each sample and the mixtures were shaken for 5 days to allow time for the BPA to adsorb. The samples were then filtered and the amount of BPA left in the water was determined by measuring its UV absorbance on a UV-vis spectrophotometer. BPA concentrations decreased in the water indicating that it had been adsorbed onto the microplastic surface, with the highest adsorption present with copper, which reduced BPA concentrations from 6.7 mg/L to 3.9 mg/L. Statistical analyses showed differences between copper, phosphate, nitrate, and chloride (df = 9, p = 0.002). Future work can apply these results to investigate the implications of pollutant transportation in urban waterways like the Chicago River.


Contrastive Representation Learning For Highly Imbalanced Multivariate Time Series With Extreme Instance Strategy, Onur Vural May 2025

Contrastive Representation Learning For Highly Imbalanced Multivariate Time Series With Extreme Instance Strategy, Onur Vural

All Graduate Theses and Dissertations, Fall 2023 to Present

Time series data refers to a sequence of data points collected or recorded at regular time intervals. In many fields including space weather, healthcare, and finance, predicting events from such data is crucial because these predictions can help protect infrastructures, improve healthcare outcomes, and forecast financial trends. However, one challenge in working with time series data is the presence of rare events, which are often underrepresented in the data. This imbalance makes it difficult for traditional prediction methods to provide accurate results, as they tend to focus more on the more frequent events and overlook the rare ones. To tackle …


Functional Data Analysis Of Weekly Confirmed Covid-19 Cases Per Million In Relation To Unemployment Rates And Emergency Declaration Responses, Elaina Kay Mcgovern May 2025

Functional Data Analysis Of Weekly Confirmed Covid-19 Cases Per Million In Relation To Unemployment Rates And Emergency Declaration Responses, Elaina Kay Mcgovern

Boise State University Theses and Dissertations

At the onset of the COVID-19 pandemic, U.S. states implemented policies that attempted to mitigate the spread and effects of the disease, such as a state of emergency declaration. This study explores the application of functional data analysis (FDA) as a means to investigate the impact of U.S. state-level emergency declarations on weekly confirmed COVID-19 cases per million during the first year of the pandemic. We focus on the duration and extent to which proactive states showed significantly different patterns of COVID-19 spread than those that implemented policies reactively. Additionally, we examine patterns in monthly state-level unemployment rates over the …


2022 Annual Operations And Maintenance Report, Butte Silver Bow May 2025

2022 Annual Operations And Maintenance Report, Butte Silver Bow

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.


2023 Annual Operations And Maintenance Report, Butte-Silver Bow Department Of Reclamation And Environmental Services May 2025

2023 Annual Operations And Maintenance Report, Butte-Silver Bow Department Of Reclamation And Environmental Services

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.


A Comparative Analysis Of Nf-Κb1 Gene Regulatory Sequence Methylation In Normotensive And Hypertensive Kenyans, Aaryan Barlas Piracha May 2025

A Comparative Analysis Of Nf-Κb1 Gene Regulatory Sequence Methylation In Normotensive And Hypertensive Kenyans, Aaryan Barlas Piracha

Honors Theses

Accounting for the majority of deaths worldwide, non-communicable diseases (NCDs) present the greatest health challenge of the twenty-first century. Specifically, cardiovascular diseases (CVDs) exceed all other NCDs in annual deaths and especially affect low- and middle-income countries (LMICs). Hypertension, being the primary risk factor for CVD, affects over 75% of adults in LMICs due to inadequate health care and preventative measures. Additionally, epigenetic modifications of DNA are important mechanisms that regulate gene expression; DNA methylation, in particular, affects cytosine residues in cytosine-phosphate-guanine (CpG) islands on regulatory sequences. Previous research in our laboratory analyzed percent methylation at 8 different CpG islands …


Composition And Rich/Lean Loading-Dependent Density Measurements Of A Series Of Aqueous Ionic Amines For Co2 Capture, Claudia Nguyen May 2025

Composition And Rich/Lean Loading-Dependent Density Measurements Of A Series Of Aqueous Ionic Amines For Co2 Capture, Claudia Nguyen

Honors Theses

As climate change worsens worldwide, there is a drive to develop more efficient and sustainable methods to mitigate its impact through carbon capture methods like carbon dioxide scrubbing. Carbon scrubbing directly captures carbon dioxide (CO2) emissions from industries or power plants before they are released into the environment. The CO2 captured can be utilized for various applications or can be stored underground. However, this method faces numerous challenges, such as the degradation of the solvent or corrosion of equipment. As a result, research has expanded to find a better medium to overcome these issues. In particular, aqueous ionic amines (AIA) …


Comparative Analysis Of Classical And Machine Learning Pathfinding Approaches, Miguel Gapud May 2025

Comparative Analysis Of Classical And Machine Learning Pathfinding Approaches, Miguel Gapud

Honors Theses

Pathfinding is an essential task for any autonomous robot. Graph-based classical pathfinding algorithms and machine learning approaches have both been used for this end, but they are often not compared against each other. An implementation of end-to-end (E2E) pathfinding using Proximal Policy Optimization (PPO) and an Alexnet architecture is compared against an implementation of Hybrid A*. A digital twin in Unity3D is used as the testing environment with the Clearpath Dingo as the pathfinding robot. In machine learning, the robot is controlled using PPO through ROS-Noetic with a camera as its sensor. Hybrid A* and its controls are implemented directly …


Toxicity And Biodegradability Of Novel Boronium Vs Conventional Ammonium-Based Antimicrobial Compounds In Wastewater Treatment Systems, Noor Shalan May 2025

Toxicity And Biodegradability Of Novel Boronium Vs Conventional Ammonium-Based Antimicrobial Compounds In Wastewater Treatment Systems, Noor Shalan

Honors Theses

Quaternary ammonium compounds (QACs) are highly effective as disinfectants, herbicides, and pesticides; thus, overuse causes elevated levels of residual toxicity in domestic and industrial wastewater. QACs can be toxic to essential bacteria breaking down pollutants in wastewater treatment plants (WWTPs) and can remain untreated in effluent, harming the environment, and contributing to antibiotic resistance, posing risks to human health. Novel boronium-based antimicrobial compounds have demonstrated efficacy in eliminating bacteria, fungi, and viruses. If the boronium compounds exhibit lower residual toxicity, they could offer a promising alternative to QACs. Because these compounds are still in development, their potential toxicity to the …


Ghosts In Glass: Ghost Crabs As Judges Of Glass Sand For Coastal Restoration, Emily Parrish May 2025

Ghosts In Glass: Ghost Crabs As Judges Of Glass Sand For Coastal Restoration, Emily Parrish

Honors Theses

Over 60% of the Gulf of Mexico coastline is actively eroding, which has resulted in thousands of miles of lost coastline over the last 100 years. This drastic loss of coastal land highlights the dire need for coastal restoration across the entirety of the Gulf Coast. A vital aspect of restoring these eroded areas is replenishing eroded substrate, traditionally conducted through offshore dredging of substrates which comes with high economic and ecological costs. Recycled glass sand may be able to fill this role and reduce our reliance on dredging while lowering the amount of glass waste entering landfills each year. …


A Hierarchical Soft Computational Model For Optimizing Agricultural Uavs: Recruiting Neutrosophic Theory And Tree Soft Sets, Mona Mohamed, Nurhan Alaa, Bilal Arain, Karam M. Sallam May 2025

A Hierarchical Soft Computational Model For Optimizing Agricultural Uavs: Recruiting Neutrosophic Theory And Tree Soft Sets, Mona Mohamed, Nurhan Alaa, Bilal Arain, Karam M. Sallam

Neutrosophic Systems with Applications

Precision agriculture is being transformed by Unmanned Aerial Vehicles (UAVs), which make it possible for yield optimization, targeted spraying, and sophisticated crop monitoring. With an emphasis on their operational capabilities, economic feasibility, and environmental implications, this research explores the revolutionary potential of UAV technology in contemporary farming systems. Practically speaking, the procedure of opting UAVs for agricultural applications is complicated by several competing aspects, inherent uncertainties, and differing stakeholder agendas. This paper suggests a new hybrid decision framework that combines Tree Soft Sets (TrSS), Neutrosophic theory, and Multi-Criteria Decision-Making (MCDM) to methodically handle these issues. Hence, the robust hybrid model …


What References Are Chatgpt, Gemini, Copilot, And Perplexity Providing For Consumer Health Questions?, Scott Johnson, Catherine Johnson, Ivan Portillo May 2025

What References Are Chatgpt, Gemini, Copilot, And Perplexity Providing For Consumer Health Questions?, Scott Johnson, Catherine Johnson, Ivan Portillo

Library Presentations, Posters, and Audiovisual Materials

Background

With the growing popularity of generative artificial intelligence (AI) models such as ChatGPT, consumers may turn to these tools to easily seek health information. To our knowledge, no study has analyzed the references provided by multiple models for consumer health questions.

Objective

We aimed to analyze the references provided by ChatGPT, Gemini, Copilot, and Perplexity for consumer health questions in order to determine the most frequently appearing references.

Methods

AI generative models ChatGPT 4.0, Google Gemini, Microsoft Copilot, and Perplexity were each asked 30 consumer health questions and prompted to provide the corresponding references. The references were recorded.

The …


Application Of Ordinal Regression Models To Acquired Stress Resistance In Wild Strains Of Saccharomyces Cerevisiae, Carson Stacy May 2025

Application Of Ordinal Regression Models To Acquired Stress Resistance In Wild Strains Of Saccharomyces Cerevisiae, Carson Stacy

Graduate Theses and Dissertations

This thesis explores the application of ordinal regression to the analysis of semi-quantitative growth assays often used when comparing fitness for different strains of the model yeast Saccharomyces cerevisiae. For stress survival assays, yeast stress resistance is measured using an ordered survival score that ranges from 0 (no growth) to 4 (confluent growth). Traditional approaches to analyze this type of data either treats data as a nominal categorical variable or as a continuous numerical variable. These approaches risk loss of information or violation of testing assumptions. In contrast, cumulative logit ordinal regression uses the information contained in the order …