Digital Commons Network^™

Greater Sage-Grouse Population Trends Across Wyoming, David R. Edmunds, Cameron L. Aldridge, Michael S. O'Donnell, Adrian P. Monroe

United States Geological Survey: Staff Publications

The scale at which analyses are performed can have an effect on model results and often one scale does not accurately describe the ecological phenomena of interest (e.g., population trends) for wide-ranging species: yet, most ecological studies are performed at a single, arbitrary scale. To best determine local and regional trends for greater sage-grouse (Centrocercus urophasianus) in Wyoming, USA, we modeled density-independent and -dependent population growth across multiple spatial scales relevant to management and conservation (Core Areas [habitat encompassing approximately 83% of the sage-grouse population on ~24% of surface area in Wyoming], local Working Groups [7 regional areas for …

Pteropus Voeltzkowi And The Understory: A Study Of The Behavioral Impacts Of The Pemba Flying Fox On The Vegetation And Soil Quality Of Pemba Island, Lea Davidson

Independent Study Project (ISP) Collection

This study examines the impact of Pteropus voeltzkowi , colloquially known as the Pemba Flying Fox, on biodiversity and health of the forest ground layer. Known to serve as reforesters, high concentrations of both fruit seeds and nutrient dense guano are introduced into specific environmental locations due to the bat's behavioral patterns. Working around two roost locations, one in Ngezi Forest and the other at the Kidike conservation site near Mjini Ole, diversity of juvenile vegetation was measured and quantified. In a laboratory setting, soil samples from both sites were analyzed for impacts of guano concentration on soil chemical properties. …

Balancing Stability And Flexibility In Adaptive Governance: An Analysis Of Tools Available In U.S. Environmental Law, Robin Kundis Craig, Ahjond S. Garmestani, Craig R. Allen, Craig Anthony (Tony) Arnold, Hannah E. Birge, Hannah Birge, Daniel A. Decaro, Alexander K. Fremier, Alexander K. Fremier, Hannah Gosnell, Edella C. Schlager

United States Geological Survey: Staff Publications

Adaptive governance must work “on the ground,” that is, it must operate through structures and procedures that the people it governs perceive to be legitimate and fair, as well as incorporating processes and substantive goals that are effective in allowing social-ecological systems (SESs) to adapt to climate change and other impacts. To address the continuing and accelerating alterations that climate change is bringing to SESs, adaptive governance generally will require more flexibility than prior governance institutions have often allowed. However, to function as good governance, adaptive governance must pay real attention to the problem of how to balance this increased …

Semi-Arid Grassland Bird Responses To Patch-Burn Grazing And Drought, Susan K. Skagen, David J. Augustine, Justin D. Derner

United States Geological Survey: Staff Publications

As grassland birds of central North America experience steep population declines with changes in land use, management of remaining tracts becomes increasingly important for population viability. The integrated use of fire and grazing may enhance vegetation heterogeneity and diversity in breeding birds, but the subsequent effects on reproduction are unknown. We examined the influence of patch-burn grazing management in shortgrass steppe in eastern Colorado on habitat use and reproductive success of 3 grassland bird species, horned lark (Eremophila alpestris), lark bunting (Calamospiza melanocorys), and McCown’s longspur (Rhynchophanes mccownii), at several spatial scales during 2011 …

The Feasibility Of Counting Songbirds Using Unmanned Aerial Vehicles, Andrew M. Wilson, Janine M. Barr, Megan E. Zagorski

Environmental Studies Faculty Publications

Obtaining unbiased survey data for vocal bird species is inherently challenging due to observer biases, habitat coverage biases, and logistical constraints. We propose that combining bioacoustic monitoring with unmanned aerial vehicle (UAV) technology could reduce some of these biases and allow bird surveys to be conducted in less accessible areas. We tested the feasibility of the UAV approach to songbird surveys using a low-cost quadcopter with a simple, lightweight recorder suspended 8 m below the vehicle. In a field experiment using playback of bird recordings, we found that small variations in UAV altitude (it hovered at 28, 48, and 68 …

Measuring Aquatic Organism Responses To Grassland Restoration: Does The Field Of Dreams Really Exist?, David A. Schumann

Electronic Theses and Dissertations

Landscape homogenization and the degradation of riparian areas has greatly impaired stream ecosystems throughout North America. Conservation programs may repair riparian ecosystems to indirectly improve water quality and instream habitat heterogeneity in hopes to elicit biological responses. However, focused manipulations on isolated stream fragments have rarely achieved biological goals. Prairie streams with restored riparian areas were appraised (chemical, physical, and biological variables) to quantify the indirect effects of prevalent grassland conservation practices on aquatic resources. Riparian rehabilitation, via passive methods, promoted bank-stabilizing vegetation along all conservation stream reaches. Riparian vegetation and function quickly recovered from previous agricultural disturbances at conservation …

The Influence Of Tree Height On Lidar’S Ability To Accurately Characterize Forest Structure And Spatial Pattern Across Reference Landscapes, Haley L. Wiggins

Graduate Student Theses, Dissertations, & Professional Papers

Successful restoration of degraded forest landscapes requires reference models that adequately capture structural heterogeneity at multiple spatial scales. Field-based methods for assessing variation in forest structure are costly and inherently suffer from limited replication and spatial coverage. LiDAR is a more cost-effective approach for generating landscape-scale data, but it has a limited ability to detect understory trees. Increased understanding of appropriate height cut-offs for trees to be reliably included in LiDAR-based analysis could improve applications of LiDAR to assessments of landscape-scale forest structure. Toward that end, I investigated the effect of varying tree-height criterion (minimum height cutoffs of 6, 9, …

Habitat Modeling And Vegetation Mapping Of Mammoth Cave National Park Using Lidar Data And Multispectral Imagery, Hongli Yang

Murray State Theses and Dissertations

An up-to-date and detailed vegetation map provides critical information for habitat management. In addition, a habitat model is necessary for Park’s Fire Management, for classification of fuel types, and for delineation of fire management units. Several attempts to map the vegetation at the Mammoth Cave National Park were conducted in 1934, 1975, 1997 and 2011. This essential goal of this study was to produce a new vegetation habitat model and update the vegetation map for the Park. Landsat-8 Operational Land Imager (OLI) imagery, LiDAR and bedrock dataset were used for habitat model configuration and vegetation mapping at Mammoth Cave National …

Balancing Stability And Flexibility In Adaptive Governance: An Analysis Of Tools Available In U.S. Environmental Law, Robin Kundis Craig, Ahjond S. Garmestani, Craig R. Allen, Craig Anthony (Tony) Arnold, Hannah E. Birge, Daniel A. Decaro, Alexander K. Fremier, Hannah Gosnell, Edella Schlager

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Adaptive governance must work “on the ground,” that is, it must operate through structures and procedures that the people it governs perceive to be legitimate and fair, as well as incorporating processes and substantive goals that are effective in allowing social-ecological systems (SESs) to adapt to climate change and other impacts. To address the continuing and accelerating alterations that climate change is bringing to SESs, adaptive governance generally will require more flexibility than prior governance institutions have often allowed. However, to function as good governance, adaptive governance must pay real attention to the problem of how to balance this increased …

A Bayesian Method For Assessing Multi-Scale Species-Habitat Relationships, Erica F. Stuber, Lutz F. Gruber, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Context Scientists face several theoretical and methodological challenges in appropriately describing fundamental wildlife-habitat relationships in models. The spatial scales of habitat relationships are often unknown, and are expected to follow a multi-scale hierarchy. Typical frequentist or information theoretic approaches often suffer under collinearity in multiscale studies, fail to converge when models are complex or represent an intractable computational burden when candidate model sets are large.

Objectives Our objective was to implement an automated, Bayesian method for inference on the spatial scales of habitat variables that best predict animal abundance.

Methods We introduce Bayesian latent indicator scale selection (BLISS), a Bayesian …

Effects Of Hydrologic Connectivity And Land Use On Floodplain Sediment Accumulation At The Savannah River Site, South Carolina, Jeremy E. Eddy

Theses and Dissertations--Earth and Environmental Sciences

Floodplains, and the sediment accumulating naturally on them, are important to maintain stream water quality and serve as sinks for organic and inorganic carbon. Newer theories contend that land use and hydrologic connectivity (water-mediated transport of matter, energy, and/or organisms within or between elements of the hydrologic cycle) play important roles in determining sediment accumulation on floodplains. This study hypothesizes that changes in hydrologic connectivity have a greater impact on floodplain sediment accumulation than changes in land use. Nine sediment cores from seven sub-basins were collected from the Savannah River Site (SRS), South Carolina, and processed for grain-size, radionuclide dating …

Dam Removal In The Usa: Effects On River Water Quality, Michael A. Kruge

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

Dam removal decisions should ideally be made after a thorough cost-benefit analysis. If dam obsolescence, structural safety, harm to fisheries, maintenance costs, and reservoir eutrophication are among the primary concerns, decommissioning would likely be favored. On the other hand, dams provide considerable benefits including water storage for agricultural and urban consumption, renewable electricity generation, support of navigational canal systems, flood control, and lakes for recreation. Because of these competing factors and interests, dam removal decision-making in the United States is often a slow process fraught with controversy, as in the case of the Klamath River.

Dams provided mechanical water power …

Imaging Bioturbation In Supratidal Carbonates: Non-Invasive Field Techniques Enhance Neoichnological And Zoogeomorphological Research, San Salvador, The Bahamas, Karen Kopcznski, Ilya Buynevich, H. Allen Curran, Jon Caris, Jonathan Nyquist

Geosciences: Faculty Publications

A case study in unconsolidated carbonates on San Salvador Island, The Bahamas, utilized high-frequency (800 MHz) georadar imaging to augment existing methodologies (burrow counts and measurements, casting) in brachyuran bioturbation research (Ocypode quadrata and Gecarcinus lateralis), and as part of a new dataset characterizing blue land crab (Cardisoma guanhumi) burrows. Non-invasive techniques such as ground-penetrating radar (GPR) can complement traditional field surveys aimed at quantifying mesoscale bioturbation in modern settings. These methods can establish diagnostic features for tracemaker identification and refine existing ichnofacies models. Drone-mounted aerial coverage provided the first high-resolution images of the micro-topography and …

Monitoring Reduction Efforts For Pm2.5 In Ellensburg,Wa Using Community-Based Social Marketing To Examine Behavioral Change, Kelsey Gibbs

All Master's Theses

In 2011, Ellensburg, Washington was labeled by the Washington Department of Ecology as being vulnerable for violating National Ambient Air Quality Standards for particulate pollution (PM_2.5­). In the Kittitas Basin, winter-time frequent air inversions and stagnant air events trap pollution near the ground, elevating pollutant concentrations during winter months. Wood smoke from household burning has been identified by mobile PM_2.5 monitoring completed in 2015 as the primary source of PM­_2.5. This research utilizes community-based social marketing techniques to encourage behavioral change for wood burning in a targeted neighborhood in Ellensburg. Residents of the target neighborhood …

Using Thermal Infrared Imagery To Estimate Soil Hydraulic Parameters: A Novel Approach, Matthew B. Thomas

Undergraduate Theses, Professional Papers, and Capstone Artifacts

In this study, skin temperature measured with a thermal infrared (TIR) camera was used to estimate soil hydraulic parameters. These physical properties that control how soils transport and retain water are notoriously difficult to measure in the field due to spatial variability. Laboratory experiments were set up to record surface skin temperature response in a clean soil column using a TIR camera after an artificial wetting event. An array of thermocouples, a net radiometer, heat flux sensor and weather station were used to constrain the TIR data and the energy budget during the experiment. The soil column surface was then …

Swift Foxes In Southwestern South Dakota: Assessing The Current Status Of A Reintroduced Population, Sarah Ann Nevison

Electronic Theses and Dissertations

Swift foxes (Vulpes velox) were reintroduced into Badlands National Park between 2003 and 2006 after being nearly extirpated from South Dakota in the early 1900’s. Genetic analysis provided strong evidence that the reintroduction was successful, but viability analysis indicated the population may be in jeopardy with a high probability of extinction. Recently, the population has declined due to various biotic and abiotic factors (e.g., recent weather patterns, effects of plague [Yersinia pestis], and increased coyote [Canis latrans] numbers). No information on the status of swift foxes has been collected since 2009. Between 2014 and 2016, the objectives of this study …

Key Differences Between Lakes And Reservoirs Modify Climate Signals: A Case For A New Conceptual Model, Nicole M. Hayes, Bridget R. Deemer, Jessica R. Corman, N. Roxanna Razavi, Kristin E. Strock

United States Geological Survey: Staff Publications

Lakes and reservoirs are recognized as important sentinels of climate change, integrating catchment and atmospheric climate change drivers. Climate change conceptual models generally consider lakes and reservoirs together despite the possibility that these systems respond differently to climate-related drivers. Here, we synthesize differences between lake and reservoir characteristics that are likely important for predicting waterbody response to climate change. To better articulate these differences, we revised the energy mass flux framework, a conceptual model for the effects of climate change on lentic ecosystems, to explicitly consider the differential responses of lake versus reservoir ecosystems. The model predicts that catchment and …

Using A Mixed-Methods Approach To Understand Urban Children's Nature Conceptions, Ecological Worldviews And Environmental Perceptions And Preferences Before And After Attending An Environmental Education Program, Alejandra Maria Bozzolasco

Theses, Dissertations and Culminating Projects

The main objective of this dissertation is to utilize multiple instruments to measure urban children’s nature conceptions, ecological worldviews, and environmental perceptions and preferences, and to determine whether they are impacted by an environmental education (EE) intervention. This information is critical today in light of growing urbanization that is considered a contributor to nature deficit disorder (NDD) in which children, particularly urban children, are growing up distanced from the natural world, thereby impacting children’s development, public health, and the environment. Urban children from northern New Jersey who attended the New Jersey School of Conservation’s (NJSOC) EE program participated in this …

Effects Of Dredging-Related Pressures On Critical Ecological Processes For Organisms Other Than Fish Or Coral. Report Of Theme 9 - Project 9.1 Prepared For The Dredging Science Node, Jessie Short, Matthew Fraser, Dianne Mclean, Gary Kendrick, Maria Byrne, Julian Caley, Doug Clarke, Andy Davis, Paul Ertemeijer, Stuart Field, Sam Gustin-Craig, John Huisman, John Keesing, Mick Keough, Paul Lavery, Ray Mansini, Kathryn Mcmahon, Kerrie Mergersen, Michael Rasheed, John Statton, Jim Stoddart, Paul Wu

Research outputs 2014 to 2021

This study reviewed environmental windows for organisms other than corals and fish such as sessile invertebrates, macroalgae and seagrasses. Environmental windows are periods of critical importance to the life history of a marine species, like reproduction and recruitment.

Aims

• To review the scientific literature on the timing and spatial extent of critical ecological processes relevant to tropical WA for marine primary producers and invertebrates (i.e. organisms other than coral and finfish) and the state of knowledge regarding potential effects of dredging on these key ecological processes. The review also had a particular focus on ecological processes in marine primary producers …

Historical Reconstructions Of Water Quality In The Kimberley Using Sediment Records. Report Of 2.2.9 Prepared For The Kimberley Marine Research Program, John Keesing, Dongyan Liu, Zineng Yuan, Yajun Peng, Yujue Wang, Pierre Richard, Pere Masque, Yingjun Chen, Yin Fang

Research outputs 2014 to 2021

This project made use of a suite of palaeoecological approaches to reconstruct a chronology of change in coastal water quality over the last approximately 100 years. The biogeochemical proxies addressed phytoplankton composition and biomass, temperature and terrestrial influences. Where possible these were matched to historical land/water use, meteorological or hydrological observational records.

The project examined sediment cores from three coastal locations in the Kimberley region, Koolama Bay (King George River), Cygnet Bay and Roebuck Bay. Each sampling location provided a contrast with which to evaluate changes over either a spatial or temporal gradient of human or natural influences.

Aims

- …

Condition Of Birds In Amazonian Rainforest Fragments And Second-Growth Forests, Angelica Maria Hernandez Palma

LSU Doctoral Dissertations

Deforestation modifies otherwise intact expanses of forest into small, isolated fragments. In addition to fragmentation, deforestation also creates abrupt forest edges and large areas of regenerating vegetation where land is abandoned after clearing. Understanding how changes in the landscape affect the physical condition of birds is crucial for managing populations in human-modified landscapes. Here I use the biomarkers feather growth rate and feather quality (ptilochronology), fluctuating asymmetry (FA), and stress hormones from feathers (CORT), to estimate the physical condition of Amazonian understory birds living in forest fragments, second-growth forests, and continuous forests. Feather CORT revealed how fragmentation disrupts interspecific interactions; …

Human Gut Microbiota And Obesity: How Is Gut Microbiota Associated With Obesity Improvement Induced By Bariatric Surgeries Or Low-Calorie Diet Treatment?, Rui Zhang

LSU Doctoral Dissertations

An increasing number of studies suggest that the complex microbial community of the human gut may have an important role in human health and disease conditions such as obesity and diabetes. However, the causal relationship among gut microbiota, obesity, weight loss, and the influence of bariatric surgery remains largely unknown. This study investigated the correlation between human gut microbiota and obesity via determining how gut microbiota is associated with obesity improvement induced by bariatric surgeries (BRS) and low-calorie diet (LCD) treatment. Specifically, we investigated the effects of various bariatric surgery (BRS) procedures and a low-calorie diet (LCD) treatment on the …

Weighted Distance Based Discriminant Analysis: The R Package Wedibadis, Itziar Irigoien, Francesc Mestres, Concepcion Arenas

The R Journal

The WeDiBaDis package provides a user friendly environment to perform discriminant analysis (supervised classification). WeDiBaDis is an easy to use package addressed to the biological and medical communities, and in general, to researchers interested in applied studies. It can be suitable when the user is interested in the problem of constructing a discriminant rule on the basis of distances between a relatively small number of instances or units of known unbalanced-class membership measured on many (possibly thousands) features of any type. This is a current situation when analyzing genetic biomedical data. This discriminant rule can then be used both, as …

Micompr: An R Package For Multivariate Independent Comparison Of Observations, Nuno Fachada, João Rodrigues, Vitor V. Lopes, Rui C. Martins, Agostinho C. Rosa

The R Journal

The R package micompr implements a procedure for assessing if two or more multivariate samples are drawn from the same distribution. The procedure uses principal component analysis to convert multivariate observations into a set of linearly uncorrelated statistical measures, which are then compared using a number of statistical methods. This technique is independent of the distributional properties of samples and automatically selects features that best explain their differences. The procedure is appropriate for comparing samples of time series, images, spectrometric measures or similar high-dimension multivariate observations

Eicompare: Comparing Ecological Inference Estimates Across Ei And Ei:Rc, Loren Collingwood, Kassra Oskooii, Sergio Garcia-Rios, Matt Barreto

The R Journal

Social scientists and statisticians often use aggregate data to predict individual-level behavior because the latter are not always available. Various statistical techniques have been developed to make inferences from one level (e.g., precinct) to another level (e.g., individual voter) that minimize errors associated with ecological inference. While ecological inference has been shown to be highly problematic in a wide array of scientific fields, many political scientists and analysis employ the techniques when studying voting patterns. Indeed, federal voting rights lawsuits now require such an analysis, yet expert reports are not consistent in which type of ecological inference is used. This …

Temporal Co2 Variations And The Influence Of Bat Colonies In Speleogenesis: Continuous Co2 Monitoring In War Eagle Cavern, Arkansas, Ginny Sue Holcomb

Graduate Theses and Dissertations

Dissolved concentrations of CO2 in a karst aquifer are a major control on calcite dissolutional processes, as CO2 combines chemically with water to form carbonic acid. As increasing amounts of CO2 are added to the system, greater resultant water aggressivity generates greater rates of dissolution. Spatial and temporal variations in carbon flux through the system may occur over a range of time scales, and high-resolution data collection is needed to truly understand and characterize such variability. Continuous CO2 monitoring in War Eagle Cavern, Arkansas, will suggest a number of influential parameters with varying degrees of importance throughout an annual cycle. …

Complex Vegetation Dynamics At The Fire–Grazing–Drought Nexus, Christine H. Bielski

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The discipline of ecology long ago moved away from viewing systems as static entities where disturbance processes, environmental stochasticity, and spatiotemporal variability play minor roles in determining ecosystem structure and function. Ecological theory continue to develop frameworks and statistical techniques capable of describing the inherent complexity in natural systems. However, in dealing with the complexity in nature, many applied disciplines have yet to adopt such frameworks or statistical techniques. The objective of this study was bridge the gap between ecological theory and application by using complex systems theory to describe grassland vegetation dynamics at the fire-grazing-drought nexus. Chapters 2 and …

Temporal Foraging Patterns Of Nonnative Frogs (Eleutherodactylus Coqui) In Hawaii, Arthur C. Wallis, Robyn L. Smith, Karen H. Beard

Wildland Resources Faculty Publications

The Puerto Rican Coqui Frog (Eleutherodactylus coqui) is a nocturnal, invasive species that was introduced into Hawaii in the 1980s. Because they reach extremely high densities (up to 90,000 frogs/ha), they have the potential to affect invertebrate prey communities. Previously, researchers used frogs collected only at night to characterize their prey. Because Coquis use retreat sites near the forest floor during the day and understory perch sites at night, frogs collected at night might show different amounts and types of prey than would frogs collected in the morning. We analyzed stomach contents of 435 frogs collected in the morning (0300–0600 …

Simple Soil Quality Tests And Organic Management Practices For Orchards In The Intermountain West, Esther Oline Thomsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Soil health is often overlooked as a long-term management strategy as growers face an increasing number of short-term management challenges in the Intermountain West. The costs of inputs are rising and water resources are becoming more limited. Soil with poor health typically requires more amendments and fertlizers to meet crop needs. Soil health tests can help reveal management practices that reduce soil health, as well as those that improve soil health. Practices known to improve soil health are reduced to no tillage, cover crop use- especially legumes, and addition of mulch and other organic materials. Soil health testing is not …

Evaluation Of Search And Rescue Planning Tools On The West Florida Shelf, Benjamin O'Loughlin

USF Tampa Graduate Theses and Dissertations

The Coast Guard conducts over 20,000 search and rescue cases a year with approximately 5% of them occurring within the coastal waters of the West Florida Shelf (WFS). Each search effort is planned using the Coast Guard’s Search and Rescue Optimal Planning System (SAROPS) which uses model inputs to create composite probability distributions based on the results of Monte Carlo projections of thousands of particle trajectories. However, SAROPS is limited by the quality of model inputs and their associated errors. This study utilizes observations from three surface drifter deployments on the WFS to evaluate the effectiveness of available surface current …