Digital Commons Network^™

Biomass Budget And Energy Flow In Alluvial Meadow Ecosystem, Milena Rychnovska, Blanka Ulehlova, Jana Jakrlova, Marta Tesrova

IGC Proceedings (1977-2023)

Primary production, production processes, and decomposition have been studied in alluvial meadow ecosystems for 6 years. Water has been found to be the decisive factor in the energy flow and mineral elements turnover. The quality and quantity of production and decomposition processes depend on the oc­currence and duration o( floods. Permanent pool of underground biomass in Alopecurus pratensis stand makes 45.3 %, permanent pool of shoot biomass makes 54.7 % of the total biomass. 19.4 % of the total biomass is taken off as forage. 11. 7 % of shoot biomass is de­composed during the summer season, and 3 .1 …

Current Aspects Of Eco-Physiological Studies Of Meadow Plants, Momcilo Konic

IGC Proceedings (1977-2023)

Basic parameters applied in eco-physiological studies of meadow plants are: water balance (hydration, transpiration intensity, amounts and forms of water, water deficit, etc.), assim­ilation balance (CO2 balance, assimilation performance, compensation effect), matter pro­duction. Eco-physiological studies should be followed by microclimatic measurements and the anatomical analysis of the meadow plants under study. Eco-physiological studies of meadow plants, if performed in a complex and systematic way, constitute the safest basis for detennining the characters of the entire meadow plant com­munity under the concrete conditions of natural factors prevailing in terms of natural condi­tions and human influence.

Landscape Management Problems Of Grassland Utilization In Mountainous Regions Of The Gdr, Peter Hentschel

IGC Proceedings (1977-2023)

In the medium-altitude mountains of the GDR, many meadows cannot be utilized for intensive forage production. Because of their importance for recreation, game feeding and nature con­servation, general afforestation is not possible. A model is presented that allows for every meadow to choose between intensive utili­zation, afforestation, and reservation for other social needs. Management methods for mead­ows not suitable for intensive utilization, espe­cially the employment of herbicides, are dis­cussed.

Integrating Nutrition And Stress Into Life History Stages Of Wild Free-Ranging Female Pronghorn, Cole A. Bleke, Eric M. Gese, Juan J. Villalba, Shane B. Roberts, Susannah S. French

Wildland Resources Student Research

Studies addressing seasonal changes in diet quality and hormones are important for understanding the interactions between ecology and physiology. We collected fecal samples from free-ranging adult female pronghorn (Antilocapra americana) to examine the relationships between indicators of nutrition and glucocorticoid activity. This occurred during three population-level, life-history-correlated sampling periods across five subpopulations. We evaluated nutrition via fecal nitrogen, fecal 2,6-diaminopimelic acid (DAPA), and assessed glucocorticoid activity using fecal glucocorticoid metabolites (FGM). We found positive relationships between fecal nitrogen and DAPA, whereas DAPA and fecal nitrogen with FGM varied in influence and strength, depending upon life history stage. Generally, …

Avian Conservation And Translocations In The Mariana Archipelago, John V. Bender

Dissertations

Island birds are among the world’s most imperiled vertebrates, and conservation translocations are increasingly used to combat threats, but their success depends on understanding the mechanics of whether and how to conduct translocations effectively. In the Commonwealth of the Northern Mariana Islands, native forest birds persist across a chain of islands where habitat degradation and loss, invasive species, and extreme weather create persistent conservation challenges. For my dissertation, I investigated how avian conservation programs and translocations can be planned, implemented, and improved under biological, logistical, and social uncertainty. For Chapter 1 I analyzed 15 years of avian translocations across seven …

Oregon State Rank Assessment For Oregon Daisy (Erigeron Oreganus), Nora Dunkirk, Sue Vrilakas

Institute for Natural Resources Publications

Oregon state conservation status assessment for Oregon Daisy (Erigeron oreganus) using NatureServe methodology, 2026.

Oregon State Rank Assessment For Bensonia (Bensoniella Oregana), Nora Dunkirk, Sue Vrilakas, Gabriel Campbell

Institute for Natural Resources Publications

Oregon state conservation status assessment for Bensonia (Bensoniella oregana) using NatureServe methodology, 2026.

Defining Life: A Conversation, K. Kofman, C. Adami, F. Baluška, J. Bongard, D. Brash, P. Calvo, G. Dodig-Crnkovic, P. Das, C. Fields, T. Froese, P. L. Gentili, G. Y. Georgiev, Scott F. Gilbert, T. N. W. Jackson, S. Kauffman, N. Lane, P. Marshall, D. Mcshea, W. Miller, S. Newman, A. Nunn, T. P. Pavlic, M. Picard, W. Ratcliff, A. Reber, J. Shapiro, A. Sloman, R. Solé, C. Sonnenschein, S. Stepney, R. Watson, O. Witkowski, M. Levin

Biology Faculty Works

Life is one of the most fascinating features of the physical world. Despite centuries of scientific study, experts still disagree about the definition, and even the possibility or utility of a definition, of this field. In a recent paper, we used AI to analyze the conceptual space formed by definitions of life given by a select set of modern workers in the life sciences and related fields. However, some of the most interesting material emerged as real-time conversations among those polled. In order to ensure that these ideas are not lost to the peer-reviewed scientific record, we here provide a …

Online Decoding Of Rat Self-Paced Locomotion Speed From Eeg Using Recurrent Neural Networks, Alejandro De Miguel, Nelson Totah, Uri Maoz

Psychology Faculty Articles and Research

Objective. Accurate and reliable neural decoding of locomotion holds promise for advancing clinical applications such as rehabilitation and prosthetic control, as well as for understanding neural correlates of action. Recent studies have demonstrated successful decoding of locomotion kinematics across species in motorized treadmill settings. However, efforts to decode locomotion speed directly and continuously in more natural contexts—where pace is self-selected rather than externally imposed—are scarce, and those that exist generally achieve only modest accuracy and require intracranial implants. Here, we aim to decode self-paced locomotion speed non-invasively and continuously using cortex-wide electroencephalography (EEG) recordings from rats. Approach. We introduce an …

Advances In Gene Editing Strategies For Viral Disease Resistance In Pigs: Knock-Out, Knock-In, And Overexpression Approaches, Zhao Namula, Takeshige Otoi, Aya Nakai, Megumi Nagahara, Maki Hirata, Fuminori Tanihara

The Thai Journal of Veterinary Medicine

Highly contagious viral pathogens—such as porcine reproductive and respiratory syndrome, classical swine fever, and African swine fever—continue to pose serious threats to the swine industry and cause major global economic losses. Conventional disease control approaches, such as vaccination and biosecurity, are limited by viral heterogeneity and immune escape mechanisms. Gene editing technologies, most notably the CRISPR/Cas9 system, offer an innovative means of introducing innate viral disease resistance or resilience in pigs. The continuous improvement of these tools can provide a sustainable strategy to enhance animal welfare and global food security and reduce reliance on traditional control measures. This review provides …

Conservation Education And The Cultivation Of Environmental Responsibility: Case Studies From Sri Lanka, Jody Miller, Pasindu Dilshan Abegunawardhana

International Journal on Responsibility

Conservation education encompasses effective pedagogical practices that enhance knowledge of the environment and foster responsible environmental actions. In addition to building an informed citizenry, conservation education is shaped by theoretical stances about the components necessary to cultivate environmental responsibility among participants and their communities. Highlighting three of our own conservation education projects in Sri Lanka as case studies, we draw from research and debates about environmental responsibility to illustrate the incorporation of environmental engagement and responsibility into these efforts, and the difficulties that arise in doing so. Sri Lanka is one of eight global biodiversity hotspots prioritized for conservation intervention. …

Biophysical Insights Into A Cryptic Ligand Site In The Hydrophobic Core Of Human Pcna, Alexis N. Dispensa, Sharon N, Greenwood, Jason Yang, Daniel E. Logatto, James Fusco, E. Railey White, Roderic G. Eckenhoff, Zhiwei Liu, Brian P. Weiser

Department of Anesthesiology Faculty Papers

Proteins contain small pockets that form due to imperfections in residue packing or the rotational and conformational movement of amino acids. In this work, we used the fluorescent probe 1-aminoanthracene (AMA) to detect a small ligand pocket in the hydrophobic core of human proliferating cell nuclear antigen (PCNA), which is a critical protein for DNA replication and repair. Fluorescence measurements of AMA reported that the core of PCNA had a dielectric constant (ε) of 4, which was very apolar and similar to cyclohexane (ε = 2). Protein mutagenesis, photoaffinity labeling, and molecular dynamics simulations localized the binding site for AMA …

Tree Layer Composition And Regeneration Status Of Quercus Floribunda Lindl. On Different Aspects Of Nainital Catchment In Kumaun Himalaya, Ambica Agnihotri, Ashish Tewari, Shahbaz Ali

Journal of Environmental Science and Sustainable Development

Oaks are climax-forming species found at various elevations in the Himalayas between 2100– 2700 masl. However, aspect-wise regeneration patterns of Quercus floribunda in the Nainital catchment remain poorly documented. While previous studies focused on oak forest structure, the present study provides new insight into aspect-wise variation in the regeneration stages of Q. floribunda in relation to microclimatic conditions. The present study aims to evaluate tree composition and the regeneration status of Q. floribunda forests across different slope aspects in the Nainital catchment area of the Kumaun Himalaya. Four sites representing different slope aspects were selected in the Nainital catchment. Soil …

Nanoscale Morphological Perturbations Of Lipid Membranes Induced By Membrane Active Peptides, Yasith Sandeepa Indigahawela Gamage

USF Tampa Graduate Theses and Dissertations

Membrane-active peptides (MAPs) are a diverse group of biologically relevant molecules that induce nanoscale modulations during their interactions with cell membranes. Understanding the precise mechanism by which these MAPs perturb or modulate the cell membranes is a cornerstone of membrane biophysics, as it facilitates rational design of useful therapeutics. That is, if we have the knowledge to determine what the peptide can do, how selective it is, or how toxic it might be, we can optimize them and design new peptide therapeutics such as for antimicrobial, anticancer, or drug-delivery applications. In general, MAPs can be categorized into two classes based …

Evaluating The Efficacy Of I-Fiber Pearl On Reducing Body Fat Accumulation In Obese Females: A Randomized, Double-Blind, And Placebo-Controlled Trial, Hung-Hsuan Kuo, Chia-Chun Chen, Ching-Chang Cho, Chun-Tse Tsai, Shiuan-Chih Chen, Chin-Lin Hsu

Journal of Food and Drug Analysis

Obesity is a growing public health challenge worldwide, strongly linked to metabolic syndrome, type 2 diabetes, and cardiovascular disease. Inulin, a soluble, fermentable fiber derived mainly from Jerusalem artichoke and chicory, has been reported to improve weight management and metabolic health. This randomized, double-blind, placebo-controlled trial evaluated the effects of inulin-enriched tapioca pearls (I-fiber pearl) on body composition and lipid parameters in obese women. Methods: Fifty women (BMI ≥ 27 or waist > 80 cm; age 20–50 years) were randomized to receive either I-fiber pearl or placebo (2 packs/day, 100 g/pack) for 12 weeks. Anthropometric indices, body composition, and blood biochemistry …

Spatial Distribution: Effect Of Oxygen Availability On Gut Microbiota Adhesion And Colonization, Ruixue Ding, Xiaotong Sun, Yinan Wang, Binbin Tu, Yue Liang, Qi Lin, Fuqiang Zhao

Journal of Food and Drug Analysis

The gut microbiota plays a crucial role in host digestion and immune regulation; however, most existing research relies on fecal sampling, leaving uncertainty regarding whether fecal microbiota can accurately reflect the symbiotic microbial components at distinct gut sites. To address this gap, this study employed 16S rRNA gene sequencing to systematically analyze the microbial composition of three spatial compartments in the rat colon: luminal contents, mucus layer, and epithelial tissue. The results revealed notable differences in microbial communities across the three compartments. The luminal contents, which were closely associated with the fecal microbiota, exhibited high microbial abundance, encompassing gram-positive bacteria, …

Effect Of Cosmetic Whitening Ingredients’ Lipophilicity On Melanocyte Cytotoxicity: A Systematic Review, Lord Sam B. Liston, Zach Uriel Cabije, Enrico John Belleza, Catherine Ortega, Mark Niño Melgo, Vanbeth Camson, Sabrina Dahlizar, Pajaree Sakdiset, Gea Abigail Ecoy, Gerard Lee See, Florencio Jr. Arce

Journal of Food and Drug Analysis

Tyrosinase is an enzyme involved in the early stages of melanin synthesis. Melanin, which gives skin its pigment, is the most targeted molecule in the development of skin-whitening cosmetic products. Consequential risks of chemically induced skin diseases are associated with the usage of skin-whitening products that contain tyrosinase-inhibiting compounds. Currently, products containing tyrosinase inhibitors on the market lack collective analysis of their toxicity on melanocytes. Moreover, national regulatory agencies (e.g., FDA) place the burden of ensuring the safety of whitening products on manufacturers, risking bias and selective reporting. In fact, the ASEAN Cosmetic Directive does not include more than half …

The Evolution Of Desi-Msi: A Comprehensive Look At Preprocessing And Quantification Strategies For Metabolomics, Cheng-Hung Yang, Hung-Yao Ho, Chen-Yu Chang, Mei-Ling Cheng

Journal of Food and Drug Analysis

Mass spectrometry imaging (MSI) has become an indispensable tool in metabolomics for visualizing the spatial distribution of biomolecules within tissues. Due to its direct, ambient analysis capability, desorption electrospray ionization (DESI-MSI) has evolved from a rapid screening tool into a precise and reliable quantitative platform. We delve into its technical principles and particularly review the criticality of sample preprocessing, highlighting the paradigm shift from a "no-preprocessing" approach to one of "optimized preprocessing." The paper details how factors like sample preservation, choice of embedding agents, washing, drying, and on-tissue chemical derivatization all impact data quality. We also discuss how the addition …

Recent Advances In Sustainable Production Of Enriched Chicken Eggs: A Mini Review, Karim El-Sabrout, Ayman Abd El-Aziz

Jurnal Ilmu Ternak Universitas Padjadjaran

Enriched or “designer” chicken eggs have emerged as an important category of functional foods aimed at improving human nutrition through dietary manipulation of laying hens. This mini-review summarizes recent advances in egg enrichment strategies, focusing on omega-3 fatty acids, vitamins, minerals, and antioxidant compounds. Omega-3 enrichment remains the most widely adopted approach, achieved through supplementation with flaxseed, fish oil, or microalgae, resulting in significant increases in eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) in egg yolk. Multi-nutrient enrichment, including selenium, vitamin E, and carotenoids, has also gained attention due to its potential in enhancing antioxidant capacity and health of hens …

Effect Of Dietary Onion Peel Powder (Allium Cepa L.) As A Feed Additive On Production Performance In Broiler, Della Ariesba Putri Dulia, Edhy Sudjarwo, Osfar Sjofjan

Jurnal Ilmu Ternak Universitas Padjadjaran

This study aims to evaluate the use of onion peel powder (Allium cepa L) as a feed additive on feed intake, weight gain, Feed Conversion Ratio (FCR), Production Index, and Income Over Feed Cost (IOFC) in broilers. A total of 144 Lohmann strain broiler (unsexed) were treated from 1 to 35 days of age. There were 6 treatments with 4 replicates, consisting of 24 experimental cages, each filled 6 broilers. The experimental design used completely randomized design (CRD). The treatment groups were as follows: basal feed without antibiotics (P0-), basal feed + 0.1% antibiotics (zinc bacitracin) (P0+), basal feed + …

Effect Of Gowok (Syzygium Polycephalum) Fortification On The Physical Properties And Color Of Goat Milk Yogurt, Siti Rahmawati Zulaikhah, Triana Setyawardani, Juni Sumarmono

Jurnal Ilmu Ternak Universitas Padjadjaran

This study aimed to determine the effect of adding parts of gowok fruit (Syzygium polycephalum) on the physical properties of goat’s milk yogurt. A completely randomized design was applied with treatments consisting of fruit parts (rind, flesh of fruit, and whole seedless fruit) and addition levels (1, 2, and 3%) with three replications. Data were analyzed using analysis of variance followed by Duncan’s multiple range test (DMRT). The results showed that gowok addition had a significant effect (P<0.05) on viscosity, syneresis, and color parameters, but no significant effect (P>0.05) on firmness and work of penetration. Yogurt viscosity ranged from 349.33 to 825 mPa·s and decreased with increasing gowok levels, while …

Physicochemical, Emulsion Stability, And Microbiological Changes Of Light Mayonnaise Containing Soy Protein During Storage, Rifka Anindita Putri, Herly Evanuarini, Premy Puspitawati Rahayu, Khothibul Umam Al Awwaly, Veronica Margareta Ani Nugiartiningsih

Jurnal Ilmu Ternak Universitas Padjadjaran

Light mayonnaise is a low-fat emulsion product that is susceptible to changes in viscosity, emulsion instability, and chemical quality degradation during storage. The addition of functional additives such as soy protein is commonly applied to support product quality. This study aimed to evaluate the physicochemical properties, emulsion stability, and microbiological quality of light mayonnaise containing 1.5% soy protein during storage for 0, 5, 10, and 15 days. The parameters analyzed included viscosity, pH value, emulsion stability, peroxide value, emulsion droplets, and total plate count (TPC). The study was conducted using four storage treatments with five replicates, applying a completely randomized …

Physicochemical, Organoleptic, And Antioxidant Functional Characteristics Of Dangke Whey Protein Ice Cream Fortified With Butterfly Pea Flower Extract, Muh. Achyar Ardat, Raden Hilman Wirayudha, Ekajayanti Kining, Zakiah Wulandari, Irma Isnafia Arief

Jurnal Ilmu Ternak Universitas Padjadjaran

This study aims to develop a functional ice cream based on dangke whey pro‐ tein with the addition of butterfly pea flower extract. Four formulations were pre‐ pared by varying milk and whey proportions: P1 (100% milk), P2 (60% milk + 40% whey), P3 (40% milk + 60% whey), and P4 (100% whey), with 5% butterfly pea ex‐ tract added to each treatment. The results showed that higher whey substitution decreased pH and overrun values but prolonged the melting resistance of ice cream. Moisture content increased with whey proportion, whereas ash content remained relatively constant across treatments. Protein and fat …

Gendered Analysis Of Fish Feed Ingredients And Sourcing Practices In Western Kenya’S Aquaculture, Kristie Drucza, Sujata Ganguly, Rodrigue Yossa, Chrysantus Tanga

All Peer-Reviewed Publications

Introduction – Fish feed management plays a central role in aquaculture productivity, but it is rarely analysed through a gender lens. This study examines how women and men differ in their use and sourcing of fish feed ingredients in smallholder aquaculture systems in Western Kenya. Drawing on feminist economics, it explores how everyday roles, access to resources, and mobility shape feed practices. Methods – The analysis uses survey data from 213 fish farmers, including 112 women and 101 men, across six counties in Western Kenya. A binary logit model was used to assess factors associated with the use of selected …

Mental Health Self-Perceptions And Resource Utilization In Undergraduate Students At Binghamton University, Nicole J. Dreznin, Sarah Marcus

Binghamton University Undergraduate Journal

Undergraduate students face increasing rates of mental health challenges, however discrepancies in mental health literacy and utilization of resources may exist across student populations. This study examined the perceptions of mental health in undergraduate students at Binghamton University and if they differed among STEM vs non-STEM, man vs. women, and first-generation vs. continuing generation undergraduate students. A 20-question survey, containing 5 demographic questions and 15 mental health related questions was distributed through Qualtrics to 9 undergraduate classes. The available response choices were based on the Likert scale. A total of 1266 students participated.  Chi square tests of independence were done …

Real-Time Image Denoising And Reconstruction Using Generative Adversarial Networks (Gans), Roa'a M. Al-Airaji, Haider Th. Salim Alrikabi, Rula Kamil, Svyd Iryna

Karbala International Journal of Modern Science

This paper presents a real-time image denoising and reconstruction system based on a compact Generative Adversarial Network (GAN) designed for embedded systems and edge computing. The proposed model employs a [ generator and a PatchGAN discriminator, trained using hybrid loss function that combines L1, perceptual, and adversarial terms to balance pixel and perceptual realism. Evaluations were conducted on multiple datasets, including DIV2K, BSD68, SIDD, DND, RENOIR, and PolyU at noise levels (σ = 15, 25, 50). Quantitatively, the proposed model achieves an average PSNR of 32.8 dB and an SSIM of 0.88, which is higher by more than 3 dB …

The Double Attraction Paradox, Rem Jaen D. Krafft

Publications and Research

The Double Attraction Paradox is a podcast series that teaches adolescents how to navigate attraction through body language, limerence, and mirroring while understanding the psychology behind emotional connection. It is a manuscript that combines personal experience, observations, and research, inspired by Rem Jaen D. Krafft's high school crush. Not only does it provide a guide for teenagers and young adults, but it also encourages readers to better understand attraction, communication, and emotional development. The final chapter examines how peer pressure, traditional high school cliques, fear of rejection, and fear of intimacy may influence societal norms, emotional contagion, and relationship formation …

Influence Of Peristalsis On The Hemodynamic Analysis Of Magnetohydrodynamic Jeffrey Fluid In A Two-Layered Narrow Channel, N. Lavanya, G. Ravi Kiran, M. Varun Kumar, K. Rajyalakshmi

Mansoura Engineering Journal

In this paper, an analytical study of MHD-influenced hemodynamic of Jeffrey fluid during peristaltic transport in a two layered narrow channel is presented, a phenomenon that has substantial ramifications for microcirculatory dynamics in the cardiovascular system. The model assumes a Jeffery fluid in the core area to encapsulate microstructural phenomena, including viscosity fluctuations, whereas the periphery area is treated as a Newtonian fluid. The governing equations for both regions are simplified and analytically solved under the long wavelength approximation. Using MATHEMATICA, a numerical investigation is carried out to examine the influence of various parameters, such as the magnetic parameters, amplitude, …

Utilization Of Egyptian Flax For Industrial Applications: Sustainable Composite Tubes From Egyptian Flax Cord, Rania El Deeb, Alaa Arafa Badr, Shaimaa Youssef El-Tarfawy, Ahmed H. Hassanin, Ashraf Elnahrawy, Abdelhamid R. Aboalasaad

Mansoura Engineering Journal

The growing demand for eco-friendly products has increased interest in natural fibers such as flax for composite materials, yet high costs limit industrial adoption. This research aims to utilize less expensive Egyptian flax secondary fibers and multifunctional characterization of locally produced flax cords to develop high-performance composite tubes via filament winding. An additional objective is to treat these fibers for technical applications, offering a sustainable alternative to synthetic materials.

Egyptian flax cords were processed using a filament winding technique to fabricate composite tubes. The study investigated the effects of varying the number of layers (e.g., 80/14 and 40/14/40 configurations), the …

Survey Increases Understanding Of United States Sweetpotato Producer Clean Seed Needs, Lorin Harvey, Mark Shankle, Rachael Carter, Kelsey Harvey

Journal of Extension

A needs assessment of sweetpotato producers across the United States was conducted as part of a strategic planning process to enhance the applicability of research and education. A national survey and a 2-day grant-planning workshop were also used to engage stakeholders to develop a USDA–NIFA Specialty Crop Research Initiative Proposal to improve and promote clean seed programs. Ninety-five U.S. sweetpotato producers completed the survey, representing more than 73,000 acres of production. Therefore, the survey respondents are estimated to account for nearly half of U.S. sweetpotato production, underscoring the importance and relevance of the results.