Digital Commons Network^™

Does Experimentally Quieting Traffic Noise Benefit People And Birds?, Mitchell J. Levenhagen, Christopher J.W. Mcclure, Jesse R. Barber

Biology Faculty Publications and Presentations

Protected natural areas are not free from noise, especially noise generated by traffic within park boundaries. Natural soundscapes are important for maintaining community structure, providing positive visitor experiences, and increasing visitor support for management actions that reduce impacts on natural resources. To test experimental quieting as a strategy to increase both wildlife habitat quality and visitor experience, we enforced decreased speed limits and presented educational signage to reduce sound levels along a road system in an alternating, on–off block design within Grand Teton National Park, Wyoming, USA. We continuously recorded background sound levels while conducting bird space use assessments and …

Describing The Gut Microbiome Of Amblema Plicata, Lauren Lawson

Electronic Theses and Dissertations

Freshwater mussels are important for nutrient cycling and ecosystem health, as they filter feed on their surrounding water column. This form of feeding makes these bivalves especially sensitive to conditions in their environment. Gut microbial communities (microbiomes) have been recognized as important to both host organism and ecosystem health; however, how microbiomes are organized and influenced is still unclear. In this study, the gut microbiomes of 58 individuals of the freshwater mussel Amblema plicata were compared across two river basins, five rivers, and nine sites in the southeastern USA. Planctomycetes, Firmicutes, and Cyanobacteria were the most common phyla within all …

Advancing Applied Research In Conservation Criminology Through The Evaluation Of Corruption Prevention, Enhancing Compliance, And Reducing Recidivism, Jessica S. Kahler, Joseph W. Rivera, Zachary T. Steele, Pilar Morales-Giner, Christian J. Rivera, Carol F. Ahossin, Ashpreet Kaur, Diane J. Episcopio-Sturgeon

Biological Sciences Faculty Publications

Concomitant with an increase in the global illegal wildlife trade has been a substantial increase in research within traditional conservation-based sciences and conservation and green criminology. While the integration of criminological theories and methods into the wildlife conservation context has advanced our understanding of and practical responses to illegal wildlife trade, there remain discrepancies between the number of empirical vs. conceptual studies and a disproportionate focus on a few select theories, geographical contexts, and taxonomic groups. We present three understudied or novel applications of criminology and criminal justice research within the fields of fisheries, forestry, and wildlife conservation. First, we …

Geometric Morphometric Analyses Define Riverine And Lacustrine Species Flocks Of Himalayan Snowtrout (Cyprinidae: Schizothorax) In Nepal, Binod Regmi, Marlis R. Douglas, David R. Edds, Michael E. Douglas

Biological Sciences Faculty Publications and Presentations

Freshwater fishes in the river and lake systems in the Himalayas and Tibetan Plateau are morphologically diverged but the evolutionary relationship of putative subspecies separated in these freshwater systems has not been explored. Snowtrout (Schizothorax spp.) are minnows (Cyprinidae) broadly distributed in Asia. Body shapes of 3 Lake Rara (northwest Nepal) endemics (S. macrophthalmus, S. nepalensis, S. raraensis) and 2 widely distributed riverine species (S. progastus, S. richardsonii) across 3 drainages in Nepal (i.e. Karnali, Gandaki, and Koshi Rivers) were studied using geometric morphometry. Data were derived from museum voucher specimens/tissues collected …

College Of Natural Sciences 2021 Year-End Publication, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Page 2 Welcome, Table of Contents
Page 3 Our Departments: Highlights From 2021
Page 4 Overview of the College
Page 5 Overview of Bold & Blue
Pages 6, 7 Announcing the First Endowed Professorship in the College of Natural Sciences
Page 8 Spooky Science, Astronomy Outreach, SDSU Chemistry Research Features on Journal Cover
Page 9 Students Win Business Plan Competition With Aims to Improve Shelf Life of Produce, Summer Researchers
Page 10 NIH Grant Helps Unravel Rare Inflammatory Genetic Disorders, International Excellence in South Dakota
Page 11 The Next Frontier of Science Education: Virtual Reality, SDSU Researchers Uncover how Cancer …

Tick Ecdysteroid Hormone, Global Microbiota/Rickettsia Signaling In The Ovary Versus Carcass During Vitellogenesis In Part-Fed (Virgin) American Dog Ticks, Dermacentor Variabilis, Loganathan Ponnusamy, Haley Sutton, Robert D. Mitchell Iii, Daniel E. Sonenshine, Charles S. Apperson, Richard Michael Roe

Biological Sciences Faculty Publications

The transovarial transmission of tick-borne bacterial pathogens is an important mechanism for their maintenance in natural populations and transmission, causing disease in humans and animals. The mechanism for this transmission and the possible role of tick hormones facilitating this process have never been studied. Injections of physiological levels of the tick hormone, 20-hydroxyecdysone (20E), into part-fed (virgin) adult females of the American dog tick, Dermacentor variabilis, attached to the host caused a reduction in density of Rickettsia montanensis in the carcass and an increase in the ovaries compared to buffer-injected controls. This injection initiates yolk protein synthesis and uptake …

Patterns Of Genetic Divergence Across Geographically Variable Populations Of Xanthisma Gracile (Asteraceae), Lavanya Challagundla, Lisa E. Wallace

Biological Sciences Faculty Publications

Premise of research. Numerous biotic and abiotic factors can contribute to local selection and lead to geographic structure and genetic divergence between populations. The southwestern United States contains many distinctive plant communities, ranging from woodlands to desert scrub, that are shaped by species adapting to local variation in elevation, precipitation, seasonality, and soils. Given this variation, species occurring across diverse habitats are expected to harbor high genetic diversity and exhibit significant genetic differences associated with environmental variation.

Methodology. Here, we studied the genetic divergence of populations of Xanthisma gracile (Asteraceae) across Arizona using amplified fragment length polymorphisms and evaluated associations …

An Investigation Into Historical And Contemporary Breeding Occurrence Of The Ferruginous Hawk In Kansas, Erica Clark

Master's Theses or Doctor of Nursing Practice

The Ferruginous Hawk (Buteo regalis) is the largest Buteo species occurring in grasslands, nesting along bluffs, buttes and isolated trees. In Kansas, the Ferruginous Hawk is listed as a Species of Greatest Conservation Need, Tier II. A previous study on Ferruginous Hawks nesting in Kansas during the years of 1979 to 1987, with sporadic visits from the 1990s to 2000, revealed that the most productive nesting territories were inaccessible to predators, placed on rocky ledges and the surrounding landscape was over 50% rangeland. I revisited 82 of the 111 historic nest territories in the summers of 2019 and …

Diatoms Of The Northeastern Gulf Of Mexico: Light And Electron Microscope Observations Of Sulcatonitzschia, A New Genus Of Nitzschioid Diatoms (Bacillariales: Bacillariaceae) With A Transverse Sulcus, James A. Nienow, Akshinthala K. S. K. Prasad

Gulf and Caribbean Research

During a systematic investigation of phytoplankton assemblages in the northeastern Gulf of Mexico (GOM) in the aftermath of the Deepwater Horizon blowout we encountered a population of diatoms morphologically similar to Nitzschia ossiformis (Taylor) Simonsen located about 75 km offshore and concentrated at a depth of 60—120 meters. The density of individuals in the population was sufficient to make detailed observations using light and electron microscopy. Our specimens were frequently united into short ribbon—like colonies. This, plus features of the fine structure of valve (biseriate striae, raphe canal without pores and flush with the valve surface) suggest the GOM population …

Trends And Opportunities In Tick-Borne Disease Geography, Catherine A. Lippi, Sadie J. Ryan, Alexis L. White, Holly D. Gaff, Colin J. Carlson

Biological Sciences Faculty Publications

Tick-borne diseases are a growing problem in many parts of the world, and their surveillance and control touch on challenging issues in medical entomology, agricultural health, veterinary medicine, and biosecurity. Spatial approaches can be used to synthesize the data generated by integrative One Health surveillance systems, and help stakeholders, managers, and medical geographers understand the current and future distribution of risk. Here, we performed a systematic review of over 8,000 studies and identified a total of 303 scientific publications that map tick-borne diseases using data on vectors, pathogens, and hosts (including wildlife, livestock, and human cases). We find that the …

Scoping Review Of Distribution Models For Selected Amblyomma Ticks And Rickettsial Group Pathogens, Catherine A. Lippi, Holly D. Gaff, Alexis L. White, Sadie J. Ryan

Biological Sciences Faculty Publications

The rising prevalence of tick-borne diseases in humans in recent decades has called attention to the need for more information on geographic risk for public health planning. Species distribution models (SDMs) are an increasingly utilized method of constructing potential geographic ranges. There are many knowledge gaps in our understanding of risk of exposure to tick-borne pathogens, particularly for those in the rickettsial group. Here, we conducted a systematic scoping review of the SDM literature for rickettsial pathogens and tick vectors in the genus Amblyomma. Of the 174 reviewed articles, only 24 studies used SDMs to estimate the potential extent …

Phylogenetic Relationships Among Mexican Species Of The Genus Sechium (Cucurbitaceae), Luis Ángel Barrera Guzmán, Juan Porfirio Legaria Solano, Jorge Cadena Iñiguez, Jaime Sahagún Castellanos

Turkish Journal of Botany

The genus Sechium includes 11 species, which are highly related to the genus Sicyos. Sechium is native to Mesoamerica, but only S. edule and S. tacaco have been domesticated. Sechium edule is the most exploited species of the genus due to its broad phenotypic variability. A total of 68 samples from the species S. chinantlense, S. compositum, S.hintonii and S.edule were evaluated, as well as their respective varietal complexes (albus, nigrum and virens groups), thereby amplifying the loci of mitochondrial DNA (CoxIII), chloroplast DNA (rbcL) and the nuclear ribosomal ITS1-5.8S-ITS2 region. This was done with the aim of establishing phylogenetic …

Southeast Michigan Wastewater Treatment Plants As Potential Sources Of Microplastic Pollution In The Rouge River And Huron River, Jennifer Troost

Master's Theses and Doctoral Dissertations

Plastic pollution is a global issue affecting the health and stability of freshwater and marine environments. Microplastics can be introduced into waterways from a variety of sources, such as agricultural runoff, anthropogenic litter, and wastewater treatment plants (WWTPs). To determine whether WWTPs are a source of microplastics to the Lower Rouge and Huron Rivers, we measured microplastic load upstream and downstream of two Southeast Michigan wastewater treatment plants: the Ann Arbor Wastewater Treatment Plant and Ypsilanti Community Utilities Authority (YCUA). Results from this study indicated that YCUA, which discharges into a small stream with limited watershed inputs, is a significant …

Defining Plant Ecological Specialists And Generalists: Building A Framework For Identification And Classification, Alex N. Kirsch

All Graduate Theses, Dissertations, and Other Capstone Projects

This thesis is submitted in two chapters. The first chapter contains background research, literature review, relevant information, and justification for the primary study. The second chapter is written as a standalone paper for submission to Ecology and Evolution, that can be read and interpreted independently of the first chapter. Specialization is a widespread but highly ambiguous and context dependent ecological concept. Here, we construct a framework to assess specialization using an objective, metric-based approach, utilizing study system Quercus. To create Metric-Based Specialization rankings, metrics related to specialization were gathered for 141 Quercus species (Number of distinct inhabited ecoregions, extent of …

Procuring Produce In A Rural, Appalachian County: A Thematic Analysis Of Community Member Experiences, Caroline Blincoe

Theses and Dissertations--Nutrition and Food Systems

Rates of obesity and other health disparities are exceptionally high in rural Appalachian counties compared to the nation as a whole. One causal factor of these health disparities in Appalachian counties is the inequitable allocation of healthy food. Food insecurity and the local food environment are large drivers for obesity experienced by Martin County, Kentucky residents. Successful socioecological model (SEM) and policy, systems, and environmental (PSE) interventions have shown promising results in reducing obesity and enhancing food security in this population. Through the transcription of semi-structured focus group interviews, thematic analysis aimed to obtain perspectives on the local food system. …

The Carbon Price Equivalent: A Metric For Comparing Climate Change Mitigation Efforts Across Jurisdictions, Gabriel Weil

Dickinson Law Review (2017-Present)

Climate change presents a global commons problem: Emissions reductions on the scale needed to meet global targets do not pass a domestic cost-benefit test in most countries. To give national governments ample incentive to pursue deep decarbonization, mutual interstate coercion will be necessary. Many proposed tools of coercive climate diplomacy would require a onedimensional metric for comparing the stringency of climate change mitigation policy packages across jurisdictions. This article proposes and defends such a metric: the carbon price equivalent. There is substantial variation in the set of climate change mitigation policy instruments implemented by different countries. Nonetheless, the consequences of …

School Gardening In America And A Survey Of South Dakota Schools, Aminah Hassoun

Electronic Theses and Dissertations

School gardening has a longstanding history in American education, dating as far back as the mid-1800s. Despite fluctuations in popularity throughout the twentieth century, school gardens have grown into an established method for hands-on teaching. This paper builds upon a historical framework of school gardening in American public education with particular focus on the connections between school gardens and agricultural education. This study offers a descriptive portrait of contemporary K-12 school gardens in South Dakota. Schools across the state were surveyed about their gardens to gain a better understanding of garden-based teaching in practice both in general education and agricultural …

Lower Socioeconomic Status Neighborhoods In Puerto Rico Have More Diverse Mosquito Communities And Higher Aedes Aegypti Abundance, Nicole A. Scavo, Roberto Barrera, Limarie J. Reyes-Torres, Donald A. Yee

Faculty Publications

Mosquito community dynamics in urban areas are influenced by an array of both social and ecological factors. Human socioeconomic factors (SEF) can be related to mosquito abundance and diversity as urban mosquito development sites are modified by varying human activity, e.g., level of abandoned structures or amount of accumulated trash. The goal of this study was to investigate the relationships among mosquito diversity, populations of Aedes aegypti, and SEF in a tropical urban setting. Mosquitoes were collected using BG Sentinel 2 traps and CDC light traps during three periods between late 2018 and early 2019 in San Juan, Puerto …

Using A Supermatrix Approach To Explore Phylogenetic Relationships, Divergence Times,And Historical Biogeography Of Saxifragales, Cara Tarullo, Jeffrey Rose, Kenneth Sytsma, Bryan T. Drew

Turkish Journal of Botany

The Saxifragales is a morphologically and ecologically diverse clade of flowering plants with a cosmopolitan distribution. Although families and genera within the order exhibit classic biogeographical disjunctions, no studies to date have rigorously examined and described its historical biogeography. Here, we analyze the historical biogeography of Saxifragales by first generating a new chronogram for the order using a supermatrix approach, based on 61 loci from 251 representative members of Saxifragales. Our results suggest that Saxifragales originated in the early Albian approximately 107 Ma and diversified rapidly in the next 15 Ma, with all stem lineages of extant families present by …

Alfred Russel Wallace Notes 15. Wallace's Many "Hats": What Should We Call Him?, Charles H. Smith

Faculty/Staff Personal Papers

Alfred Russel Wallace (1823−1913) has been referred to by name through the aid of a variety of labels – some thirty or more, in fact – that link him to his emphases of attention. How many of these labels are/were justifiable? The assessment here is that he is probably best remembered as a ‘naturalist,’ ‘geographer,’ ‘evolutionist,’ and ‘social critic.’

An Evaluation Of Antiparasitics Used To Treat The Sea Louse, Caligus Rogercresseyi, In Chilean Salmonid Farming, Dayla Woller

Scripps Senior Theses

Sea lice pose a global threat to open-net salmonid farming. As Chile is the second largest Atlantic salmon producer, they have a vested interest in mitigating infestations and increasing production. However, this will not be possible without 1) increased research on the underlying mechanisms behind sea lice infestations that will inform 2) governmental regulation of salmon farming. This increase in research and governmental regulation will only be possible through transparency on pesticide practices and sea louse monitoring data from companies operating in Chile. Taking these steps would bring Chile closer to being the largest producer of Atlantic salmon and an …

Gut Microbiota Profiles Of Young South Indian Children: Child Sex-Specific Relations With Growth, Nirupama Shivakumar, Ambily Sivadas, Sarita Devi, Farook Jahoor, John Mclaughlin, Craig P Smith, Anura V Kurpad, Arpita Mukhopadhyay

Children’s Nutrition Research Center Staff Publications

Gut microbiota has been implicated as a modifier of childhood growth. Here, 16S rRNA sequencing-based fecal microbiota profiles of 18-24 month old Indian children were evaluated (n = 41), in relation to their anthropometric parameters, intestinal permeability, body composition and total energy expenditure. Pathway analyses were conducted to assess microbial functions related to stunting, underweight and wasting. The fecal microbiota was enriched in Prevotella 9, Bifidobacterium and Escherichia-Shigella. Weight, weight-for-age Z-scores (WAZ) and weight-for-length Z-scores (WLZ), along with age, acted as covariates of microbiota variation specifically in boys (n = 23). Bifidobacterium longum subsp longum abundance was positively associated with …

The Potential Of Göktürk 2 Satellite Images For Mapping Burnt Forest Areas, Murat Kuruca, Di̇lek Küçük Matci, Uğur Avdan

Turkish Journal of Agriculture and Forestry

Using remotely sensed data to identify burnt forest areas produces fast, economical, and highly accurate results. Accordingly, in this study we investigate the capabilities of Göktürk-2, Turkey's national satellite, for mapping burnt forest areas. We compare our results with those obtained from Landsat-8 and Worldview-2 satellite images, which are frequently used for mapping burnt areas. The capabilities of the satellites are compared, in terms of detecting burnt forest areas, using support vector machine (SVM) and rotation forest (RF) classification, which are advanced methods. According to the results of the accuracy analysis, SVM classification gives similar kappa statistics and overall accuracy …

Environmental Controls On The Terrestrial Water Cycle In Forested Mountain Ecosystems., Luis Andrés Guillén

Graduate Theses, Dissertations, and Problem Reports (ETD)

Water is a key resource to natural ecosystems and human societies alike, and the water cycle is fundamentally linked to the climate and the characteristics of catchments. However, the challenges posed by environmental change makes it imperative to understand how the water cycle is affected by biotic and abiotic factors, in particular, in areas that are crucial sources of water like forested headwater catchments. Therefore, this doctoral dissertation aims to advance the knowledge on the dynamics between climate, vegetation and landscape that determine the water balance of forested mountain ecosystems. This document presents five chapters, an introductory chapter, three standalone …

Three Essays On “Energy , Environment, And Developmental Economics”, Bolarinwa Ajanaku

Graduate Theses, Dissertations, and Problem Reports (ETD)

This dissertation examines topics related to renewable energy development and investment planning, energy markets, environment degradation and economic development. The substantial ecological costs of deforestation are well known and considered globally important due to biodiversity loss, land degradation, soil erosion, and contributions to climate change. The first essay focuses upon understanding the tradeoff between development and deforestation in Africa. In the second essay, spatial analysis and Geographic Information System (GIS) are applied to determine potential locations for wind farms development in the state of West Virginia. Lastly, the third essay examines the role of wind power penetration on wholesale electricity …

A Snapshot Of Ancient Microbial Life: Microorganisms And Organic Compounds In Primary Fluid Inclusions In Bedded Halite, Neoproterozoic Browne Formation Of Central Australia, Sara I. Schreder-Gomes

Graduate Theses, Dissertations, and Problem Reports (ETD)

Modern shallow brine environments contain an abundance of microorganisms. Microorganisms, mineral crystals, and air bubbles can be trapped with those brines in primary fluid inclusions in bedded halite as it grows in shallow saline surface waters. Primary fluid inclusions and their contents can be preserved, unaltered, for millions of years.

The ~830 million-year-old Browne Formation of central Australia contains intervals of bedded halite with unaltered primary fluid inclusions. Intervals of bedded halite were sampled in the Empress 1A core from ~1480 m – 1520 m depths. Here, I used petrography to describe suspect microorganisms and organic compounds that were trapped …

Applying A Novel Systems Approach To Address Systemic Environmental Injustices: Constructing Soil For Limiting The Legacy Of Lead (Pb), Sara Perl Egendorf, Peter M. Groffman, Zhongqi Cheng, Michael Menser, Jan Mun, Howard Mielke

Advanced Science Research Center

The knowledge of unsustainable human and Earth system interactions is widespread, especially in light of systemic environmental injustices. Systems science has enabled complex and rigorous understandings of human and Earth system dynamics, particularly relating to pollution of Earth’s land, water, air, and organisms. Given that many of these systems are not functioning sustainably or optimally, how might this field enable both rigorous understanding of the issues and experiments aimed at alternative outcomes? Here, we put forth a novel, multiscale systems science approach with three steps: (1) understanding the systemic issues at hand, (2) identifying systemic interventions, and (3) applying experiments …

Impact Of Covid-19 On Ohio's National Parks Visitation, Ryan Grzeschik

Williams Honors College, Honors Research Projects

The COVID-19 pandemic has fundamentally changed the way in which society operates in order to get the novel disease under control. Businesses throughout the United States have had to close or reduce provided services, stay at home orders have secluded many people, and social distancing limits contact between others so many are turning to the parks system to cope with these changes. This study aims to find how the visitation of national parks in Ohio have been affected through the first six months of the pandemic. Visitation statistics were compared from March to August of 2020 to those same months …

Comparative Biogeography And The Evolution Of Population Structure For Bottlenose And Common Dolphins In The Indian Ocean, Howard W.I. Gray, Ing Chen, André E. Moura, Ada Natoli, Shin Nishida, Shinsuke Tanabe, Gianna Minton, Louisa S. Ponnampalam, Muhammad S. Kiani, Ross Culloch, Mauvis Gore, Anna Särnblad, Omar Amir, Per Berggren, Tim Collins, Andrew J. Willson, Robert Baldwin, A. Rus Hoelzel

All Works

Aim: In the marine environment, where there are few physical boundaries to gene flow, there is often nevertheless intraspecific diversity with consequences for effective conservation and management. Here, we compare two closely related dolphin species with a shared distribution in the Indian Ocean (IO) to better understand the biogeographic drivers of their population structure. Location: Global oceans and seas with a focus on the Indian Ocean. Taxon: Tursiops sp. and Delphinus sp. Methods: Bayesian, ordination, assignment, statistical and phylogenetic analyses to assess phylogeography, connectivity and population structure using microsatellite and mitochondrial DNA genetic markers. Results: Both Tursiops sp. and Delphinus …

The Social Behavior Of Pine Sawflies In The Genus Neodiprion, John W. Terbot Ii

Theses and Dissertations--Biology

Group living is found across the animal kingdom ranging from temporary mating aggregations to complex, eusocial lifestyles. A particularly common form of group living found among insects are larval or nymphal herds. This lifestyle consists of immature insects living together and results in several proposed costs and benefits. Benefits of this lifestyle include improved ability to regulate a group’s microenvironment, more efficient use of their host, and the ability to engage in collective predator defenses. Offsetting these benefits are costs resulting from living in close proximity to conspecifics which include increased competition, greater visibility to predators, and heightened disease risks. …