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Androthrips Ramachandrai (Thysanoptera: Phlaeothripidae): An Introduced Thrips In The United States, David W. Boyd, Jr., David W. Held

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Androthrips ramachandrai Karny is an exotic thrips, assumed to be predacious, and is associated with gall-inducing thrips. It was first reported in the U.S. from FL, and intercepted in CA from Thailand in 2002. We surveyed Ficus spp. with Gynaikothrips-induced galls in AL, CA, FL, HI, LA, MS, and TX, and document that A. ramachandrai is now established in CA, FL, HI, and TX. It probably has been spread by the ornamental horticulture industry. We outline its biology and compare it to a congener A. flavipes, a documented thrips predator. Androthrips ramachandrai has the potential to be a …

Survey Of Phytophagous Insects And Foliar Pathogens In China For A Biocontrol Perspective On Kudzu, Pueraria Montana Var. Lobata (Willd.) Maesen And S. Almeida (Fabaceae), Jiang-Hua Sun, Zhu-Dong Liu, Kerry O. Britton, Ping Cai, David Orr, Judith Hough-Goldstein

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

A three-year survey of kudzu foliage, seed, stems, and roots for associated phytophagous insects was conducted to establish basic information about the insect communities that kudzu harbors in China and to assess the abundance, diversity and damage caused by these insects. Diseases of kudzu were also surveyed in southern China. A total of 116 phytophagous insect species in 31 families and 5 orders were collected from kudzu in China, in six feeding guilds: foliage, sap, stem, terminal, seed and root feeders. The impact of foliage feeders varied from site to site and year to year, and over the course of …

Cultivation Of Methanogens From Shallow Marine Sediments At Hydrate Ridge, Orego, Melissa Kendall, David R. Boone

Biology Faculty Publications and Presentations

Little is known about the methanogenic degradation of acetate, the fate of molecular hydrogen and formate or the ability of methanogens to grow and produce methane in cold, anoxic marine sediments. The microbes that produce methane were examined in permanently cold, anoxic marine sediments at Hydrate Ridge (44°35' N, 125°10' W, depth 800 m). Sediment samples (15 to 35 cm deep) were collected from areas of active methane ebullition or areas where methane hydrates occurred. The samples were diluted into enrichment medium with formate, acetate or trimethylamine as catabolic substrate. After 2 years of incubation at 4 °C to 15 …

Assessment Of Anti-Poaching Effort In Ruaha National Park, Tanzania, C. L. Nahonyo

Tanzania Journal of Science

Anti-poaching effort in Ruaha National Park for the period between January 1996 to June 1999 was evaluated in terms of strength, frequency and duration of patrols, area covered and success of patrols. It was found that the park spent 72.4 US$ km-2 year-1 on law enforcement. There were 72 rangers each required to patrol on the average 143 km2. A total of 1,255 patrols were conducted; patrols ranged from 14 to 43 trips per month and each lasted between 1 to 25 days and most were foot and vehicle patrols. Patrol units had 2 to 11 rangers while the average …

Distribution Of Foraging Shearwaters Relative To Inner Front Of Se Bering Sea, J. Jahncke, K. O. Coyle, Stephan I. Zeeman, N. B. Kachel, G. L. Hunt Jr.

Marine Sciences Faculty Publications

We examined the hypothesis that short-tailed shearwaters Puffinus tenuirostris aggregate to forage at the inner front of the SE Bering Sea because of enhanced production there. We tested this hypothesis by comparing primary production, the distribution of euphausiids and the distribution of shearwaters relative to the front during late spring and late summer/early fall of 1997, 1998 and 1999. We found enhanced primary production at the front and offshore of the front during summer but not during spring. Primary production varied between seasons and years. Major differences were related to anomalous conditions in 1997 and 1998. The density of euphausiids …

A Method For Testing The Host Specificity Of Ectoparasites: Give Them The Opportunity To Choose, Carlos El Esbérard, Fernanda Martins-Hatano, Emerson B. Bittencourt, David Ep Bossi, Angélica Fontes, Marcela Lareschi, Vanderlaine Menezes, Helena G. Bergallo, Donald Gettinger

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Host-choice experiments were carried out with rodent and bat ectoparasites on Ilha Grande, state of Rio de Janeiro, Brazil. We constructed experimental chambers that enclosed three different rodent or bat host species, and then introduced a selected set of ectoparasitic arthropods. When given the opportunity to choose among host species, the ectoparasites showed a strong tendency to select their primary hosts, and reject novel host species. These kinds of simple experiments can be valuable tools for assessing the ability of ectoparasites to locate and discern differences between host species, and make choices about which hosts to infest, and which hosts …

The Optimal Discovery Procedure: A New Approach To Simultaneous Significance Testing, John D. Storey

UW Biostatistics Working Paper Series

Significance testing is one of the main objectives of statistics. The Neyman-Pearson lemma provides a simple rule for optimally testing a single hypothesis when the null and alternative distributions are known. This result has played a major role in the development of significance testing strategies that are used in practice. Most of the work extending single testing strategies to multiple tests has focused on formulating and estimating new types of significance measures, such as the false discovery rate. These methods tend to be based on p-values that are calculated from each test individually, ignoring information from the other tests. As …

The Optimal Discovery Procedure For Large-Scale Significance Testing, With Applications To Comparative Microarray Experiments, John D. Storey, James Y. Dai, Jeffrey T. Leek

UW Biostatistics Working Paper Series

As much of the focus of genetics and molecular biology has shifted toward the systems level, it has become increasingly important to accurately extract biologically relevant signal from thousands of related measurements. The common property among these high-dimensional biological studies is that the measured features have a rich and largely unknown underlying structure. One example of much recent interest is identifying differentially expressed genes in comparative microarray experiments. We propose a new approach aimed at optimally performing many hypothesis tests in a high-dimensional study. This approach estimates the Optimal Discovery Procedure (ODP), which has recently been introduced and theoretically shown …

Application Of A Multiple Testing Procedure Controlling The Proportion Of False Positives To Protein And Bacterial Data, Merrill D. Birkner, Alan E. Hubbard, Mark J. Van Der Laan

U.C. Berkeley Division of Biostatistics Working Paper Series

Simultaneously testing multiple hypotheses is important in high-dimensional biological studies. In these situations, one is often interested in controlling the Type-I error rate, such as the proportion of false positives to total rejections (TPPFP) at a specific level, alpha. This article will present an application of the E-Bayes/Bootstrap TPPFP procedure, presented in van der Laan et al. (2005), which controls the tail probability of the proportion of false positives (TPPFP), on two biological datasets. The two data applications include firstly, the application to a mass-spectrometry dataset of two leukemia subtypes, AML and ALL. The protein data measurements include intensity and …

American Society Of Parasitologists Newsletter, V. 27, No. 2, Summer 2005, Scott Lyell Gardner

American Society of Parasitologists: Newsletter

An issue of the American Society of Parasitologists' quarterly newsletter, also called the Journal of Parasitology Newsletter.

Development Of Nicarbazin As A Reproductive Inhibitor For Resident Canada Geese, Kimberly S. Bynum, Christi A. Yonder, John D. Eisemann, John J. Johnston, Lowell A. Miller

Wildlife Damage Management Conference

Expanding populations of resident Canada geese that remain in suburban and urban areas year-round often result in increased conflicts with humans. Non-lethal and humane means are needed for managing the size of Canada goose flocks residing near or on airports, golf courses, industrial parks, government sites, and city parks. A side effect of nicarbazin, a veterinary drug used to control coccidiosis in chickens, is decreased egg production and hatching. Exploiting this side effect, studies of nicarbazin for reducing the hatchability of eggs from Canada geese were conducted. An initial study in Cotumix quail verified reduction in hatchability in a species …

Cell Wall Functions Required For Mating In Saccharomyces Cerevisiae, Stephen Dougherty

Renée Crown University Honors Thesis Projects - All

In order for two haploid yeast cells to undergo normal fusion during mating, adhesive contacts are formed by a general class of fungal proteins termed “adhesins”. Within this family there is a subgroup of cell wall proteins termed “agglutinins” which are known to mediate aggregation, thereby increasing mating efficiency in liquid medium (Aga1p, Aga2p, Aga1p). In the absence of sufficient mating adhesive contacts we observed that cells undergo defective morphogenesis, apparently continuing to grow at their tips after fusing at the expense of laterally expanding their conjugation bridge. Based on these qualitative observations, I utilized differential interference microscopy to capture …

The Biology Of Canadian Weeds. 131. Polygonum Aviculare L., Mihai Costea, François J. Tardif

Biology Faculty Publications

A review and assessment of biological information as well as personal data are provided for Polygonum aviculare in Canada. The species has been revised taxonomically and the six subspecies that occur in Canada are presented. Three of the subspecies, P. aviculare subsp. aviculare, P. aviculare subsp. neglectum and P. aviculare subsp. depressum are weeds introduced to Canada from Europe. A fourth subspecies, P. aviculare subsp. buxiforme is apparently native to North America. The geographical distribution of the latter four subspecies is very wide. Plants exhibit a high phenotypic plasticity and genetic variability, and they easily adapt to a multitude …

The Underwater Life Off The Coast Of Southern California, Kathie Lyn Purkey

Theses Digitization Project

This project reviews the basic chemical and geographical features of the ocean, biological classification of marine life, background of the ocean's flora and fauna, and the ocean's environment. These facts are presented through an underwater documentary filmed at various sites along Southern California's coast and complemented with lesson plans designed for grades K - 4.

Antifungal Activity Of Camptothecin, Trifolin, And Hyperoside Isolated From Camptotheca Acuminata, Shiyou Li, Zhizhen Zhang, Abigail Cain, Bo Wang, Melissa Long, Josephine Taylor

Faculty Publications

Leaf spots and root rots are major fungal diseases in Camptotheca acuminata that limit cultivation of the plant for camptothecin (CPT), a promising anticancer and antiviral alkaloid. Bioassays showed that pure CPT and flavonoids (trifolin and hyperoside) isolated from Camptotheca effectively control fungal pathogens in vitro, including Alternaria alternata, Epicoccum nigrum, Pestalotia guepinii, Drechslera sp., and Fusarium avenaceum, although antifungal activity of these compounds in the plant is limited. CPT inhibited mycelial growth by approximately 50% (EC₅₀) at 10−30 μg/mL and fully inhibited growth at 75−125 μg/mL. The flavonoids were less effective than CPT …

Targeted Expression Of A Dominant-Negative Fibroblast Growth Factor (Fgf) Receptor In Gonadotropin-Releasing Hormone (Gnrh) Neurons Reduces Fgf Responsiveness And The Size Of Gnrh Neuronal Population, Pei-San Tsai, Suzanne M. Moenter, Hector R. Postigo, Mohammed El Majdoubi, Toni R. Pak, John C. Gill, Sreenivasan Paruthiyil, Sabine Werner, Richard I. Weiner

Collected Faculty Scholarship

Increasing evidence suggests that fibroblast growth factors (FGFs) are neurotrophic in GnRH neurons. However, the extent to which FGFs are involved in establishing a functional GnRH system in the whole organism has not been investigated. In this study, transgenic mice with the expression of a dominant-negative FGF receptor mutant (FGFRm) targeted to GnRH neurons were generated to examine the consequence of disrupted FGF signaling on the formation of the GnRH system. To first test the effectiveness of this strategy, GT1 cells, a GnRH neuronal cell line, were stably transfected with FGFRm. The transfected cells showed attenuated neurite outgrowth, diminished FGF-2 …

Threatened By Industry, Saved By Science: Mussel Propagation At The Fairport Biological Laboratory, James Pritchard

Journal of the Iowa Academy of Science: JIAS

During the 1890s, people on the Mississippi River exploited mussel populations to support a thriving button industry. Within a brief time, they noticed significant declines in mussel populations, and called on the U.S. Bureau of Fisheries to save the resource. This paper discusses mussel propagation studies, techniques, and activities carried on in association with the Fairport Biological Laboratory (Iowa) from about 1908 to 1932. While scientists developed sophisticated techniques and had success in mussel propagation, changing habitat conditions in the river (caused mainly by pollution and dam construction) meant limited success in rescuing mussel stocks, while the introduction of plastic …

Ecology Of The Rock Shrimp Sicyonia Dorsalis Kingsley, 1878 (Crustacea: Sicyoniidae) In A Subtropical Region Of Brazil, Rogerio Caetano Da Costa, Adilson Fransozo, Maria Lucia Negreiros-Fransozo

Gulf and Caribbean Research

The present study analyzes the abundance and distribution of the rock shrimp Sicyonia dorsalis, in relation to water temperature, salinity, depth, organic matter content, and sediment texture in Mar Virado (MV), Ubatuba (UBA) and Ubatumirim (UBM), 3 distinct bays along the northern coast of São Paulo State (23°S, 45°W), Brazil. Six transects were taken in each bay, 4 being parallel to the coastline and 2 next to the rocky shores. Monthly samples were taken over a 2-year period (1998 and 1999) with a shrimp fishing boat equipped with double-rig nets. A total of 2,498 specimens was obtained with 804 …

Interspecific Competition For Pollination Lowers Seed Production And Outcrossing In Mimulus Ringens, John M. Bell, Jeffrey D. Karron, Randall J. Mitchell

Biology Faculty Research

Sympatric plant species with similar flowering phenologies and floral morphologies may compete for pollination, and as a consequence potentially influence each other's reproductive success and mating system. Two likely competitors are Mimulus ringens and Lobelia siphilitica, which co-occur in wet meadows of central and eastern North America, produce blue zygomorphic flowers, and share several species of bumble bee pollinators. To test for effects of competition for pollination, we planted experimental arrays of Mimulus ringens, each consisting of genets with unique combinations of homozygous marker genotypes. In two arrays we planted mixtures of Mimulus and Lobelia. and in two additional arrays …

Filarial Genomics, Steven A. Williams

Biological Sciences: Faculty Publications

No abstract provided.

The Yeast Rrna Biosynthesis Factor Ebp2p Is Also Required For Efficient Nuclear Division, Costin N. Ionescu, Sofia Origanti, Michael A. Mcalear

Biological Sciences Faculty Research and Publications

Molecular genetic analysis of the yeast Ebp2 protein has revealed that it is an essential, nucleolar protein that functions in the rRNA biosynthesis pathway. Temperature-sensitive ebp2-1 mutants are defective in the processing of the 27 SA precursor rRNA, and the point substitutions that disrupt this activity cluster towards the central, more highly conserved region of the Ebp2 protein. We report here that other ebp2 mutants exhibit deficiencies associated with defects in chromosome segregation. Yeast cells bearing a 50 amino acid C-terminal truncation allele (ebp2ΔC50) display a slow-growth phenotype and exhibit an increased percentage of cells with …

Feasibility Of Mapping Benthic Biotopes In The Hudson River, Nicole P. Maher, Robert M. Cerrato

School of Marine & Atmospheric Sciences Faculty Publications

Successful management of aquatic resources requires comprehensive maps that identify the spatial distribution and extent of potentially vulnerable habitats and their resident biota (e.g., essential fish habitat). We illustrate a technique that describes submerged landscapes not only in terms of geophysical properties, but also in terms of the resident biotic communities. Biological community distribution was highly correlated with the geophysical provinces initially identified by Bell et al. (2000). However, fewer groups of stations (created mainly by combining provinces) explained almost as much of the variation in benthic community structure and was a better description of the major biotopes in this …

Bioconductor: Open Software Development For Computational Biology And Bioinformatics, Robert C. Gentleman, Vincent J. Carey, Douglas J. Bates, Benjamin M. Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Guenther Sawitzki, Colin Smith, Gordon K. Smyth, Luke Tierney, Yee Hwa Yang, Jianhua Zhang

Bioconductor Project Working Papers

The Bioconductor project is an initiative for the collaborative creation of extensible software for computational biology and bioinformatics. We detail some of the design decisions, software paradigms and operational strategies that have allowed a small number of researchers to provide a wide variety of innovative, extensible, software solutions in a relatively short time. The use of an object oriented programming paradigm, the adoption and development of a software package system, designing by contract, distributed development and collaboration with other projects are elements of this project's success. Individually, each of these concepts are useful and important but when combined they have …

Seeding The Universe With Life: Securing Our Cosmological Future, Michael Noah Mautner

Chemistry Publications

Life is unique in Nature, and for us, it is precious. Life is unique in its complex patterns, and in its purposeful self-continuation. We belong to life and share its drive for self-propagation. Belonging to life then implies a human purpose to secure, expand and propagate our family of gene/protein life.

This purpose is best achieved in space, where life has an immense future. We can start now to secure this future, by seeding with life new solar systems. New species can develop there into intelligent beings who will further expand life in the galaxy. Filling the universe with life …

An Inventory And Condition Survey Of The Pilbara Region, Western Australia, A M E Van Vreeswyk, K A. Leighton, A L. Payne, P Hennig

Technical Bulletins

The inventory and condition survey of the Pilbara region, undertaken by the Department of Agriculture, Western Australia between 1995 and 1999, describes and maps the natural resources of the region’s pastoral leasehold land. This survey report provides a baseline record of the existence and condition of the natural area’s resources, to assist with the planning and implementation of land management practices. The report identified and described the condition of soils, landforms, vegetation, habitat, ecosystems, and declared plants and animals. It also assessed the impact of pastoralism and made land management recommendations. The area surveyed covers about 181 723 km². Seven …

Rice-Feeding Insects And Selected Natural Enemies In West Africa: Biology, Ecology, Identification, E. A. Heinrichs, Alberto T. Barrion

Entomology Papers from Other Sources

FOREWORD • ACKNOWLEDGMENTS • INTRODUCTION • RICE IN AFRICA • RICE-FEEDING INSECTS • CLIMATIC ZONES AND RICE ECOSYSTEMS AS HABITATS • CONSTRAINTS TO RICE PRODUCTION • SPECIES IN WEST AFRICA • DIRECT DAMAGE • ROLE IN DISEASE TRANSMISSION

BIOLOGY AND ECOLOGY OF RICE-FEEDING INSECTS

ROOT FEEDERS : Mole crickets, Gryllotalpa africana Palisot de Beauvois; Orthoptera: Gryllotalpidae • Root aphids, Tetraneura nigriabdominalis (Sasaki); Hemiptera (suborder Homoptera): Aphididae • Termites, Macrotermes, Microtermes, and Trinervitermes spp.; Isoptera: Termitidae • Black beetles, Heteronychus mosambicus Peringuey (= H. oryzae Britton); Coleoptera: Scarabaeidae: Dynastinae • Rice water weevils, Afroryzophilus djibai Lyal; Coleoptera: Curculionidae • …

Supercooling Differences In The Eastern Subterranean Termite (Isoptera: Rhinotermitidae), Brian J. Cabrera, Shripat T. Kamble

Department of Entomology: Faculty Publications

Supercooling points were determined for untreated field-collected and untreated laboratory-maintained Reticulitermes flavipes (Kollar) workers and soldiers. Workers treated with antibiotics or had their hindgut-protozoa removed by exposing them to oxygen under pressure to determine the effects of absence of the hindgut fauna on supercooling. Supercooling points were compared be-tween live and freshly killed workers to determine whether supercooling in this species might be simply due to the biochemical properties of body fluids. Laboratory-maintained workers were also subjected to desiccation, starvation, or atmospheric pressure to determine their effects on supercool-ing. Supercooling points were lowest for laboratory workers treated with antibiotics and …

Reproductive Structures And Early Life History Of The Gulf Toadfish, Opsanus Beta, In The Tecolutla Estuary, Veracruz, Mexico, Alfredo Gallardo-Torres, Jose Antonio Martinez-Perez, Brian J. Lezina

Gulf and Caribbean Research

Although the Gulf toadfish, Opsanus beta, is an abundant member of the nearshore Gulf of Mexico ichthyofaunal assemblage, little information exists regarding the ecology of the species, especially for southern Gulf of Mexico populations. We added to the existing knowledge of this species by describing the reproductive structures and examining the early life history of this species in the Tecolutla estuary, Mexico. Macro- and microscopic examination of 7 males showed spermatogenesis to be similar to other teleost species except for the occurrence of biflagellate spermatozoa. Histological examination of the male accessory gland showed 3 tissue layers, but their functions …

Seasonal Occurrence Of Phyllophaga Species And Biological Studies Of Phyllophage Ephilida (Say) On Sweet Potato, Ipomoea Batatas (L) Lam, In Louisiana, Aboubacar Diagne

LSU Doctoral Dissertations

The biology of Phyllophaga ephilida (Say) was studied in Louisiana with both laboratory and field experiments from 1998 through 2003. The seasonal occurrence of common adult Phyllophaga species in sweet potato growing areas was surveyed with blacklight traps. P. ephilida and P. crinita (Burmeister) were the most common species at all locations. The attractiveness of seven methyl esters of L-isoleucine and L-valine blends to P. ephilida males was evaluated in sweet potato fields in 1999 and 2000. The 100% methyl ester of L-isoleucine was significantly more attractive than all other blend ratios that were tested. The life cycle of P. …

Evaluation Of Injury And Management Strategies For Stink Bugs (Heteroptera: Pentatomidae) On Cotton, Gossypium Hirsutum L., Melissa Marie Willrich

LSU Doctoral Dissertations

The effects of brown stink bug, Euschistus servus (Say), and southern green stink bug, Nezara viridula (L.), feeding on pre-flowering, flowering, and senescing cotton, Gossypium hirsutum L., plants were evaluated in field studies. Vegetative stage seedlings and flower buds (squares) were not significantly injured by adults or nymphs of either species in no-choice studies. Brown stink bug adults induced boll abscission, and reduced seedcotton yield and seed germination in bolls accumulating „T 350, „T 550, and 101 to „T 600 heat units beyond anthesis, respectively. In free-choice tests, boll preference was evaluated during each of the initial five weeks of …