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Articles 3271 - 3300 of 114079
Full-Text Articles in Entire DC Network
Aging In Mice Alters Regionally Enriched Striatal Astrocytes, Kay E Linker, Violeta Duran-Laforet, Matthias Ollivier, Xinzhu Yu, Dorothy P Schafer, Baljit S Khakh
Aging In Mice Alters Regionally Enriched Striatal Astrocytes, Kay E Linker, Violeta Duran-Laforet, Matthias Ollivier, Xinzhu Yu, Dorothy P Schafer, Baljit S Khakh
Faculty, Staff and Student Publications
Aging affects multiple organs and within the brain drives distinct molecular changes across different cell types. The striatum encodes motor behaviors that decline with age, but our understanding of how cells within the striatum change remains incomplete. Using single-cell RNA sequencing from young and aged mice we identify molecularly distinct astrocyte subtypes. We show that astrocytes change significantly with age, exhibiting downregulation of genes, reduced diversity, and a shift to more homogenous inflammatory transcriptomic profiles. By exploring where striatal astrocyte subtypes are located with single-cell resolution, we map astrocytes enriched in dorsal, medial, and ventral striatum. Age increases inflammatory marker …
Synthesis And Characterization Of Fe-Zn Bimetallic Nanoparticles Via Two-Step Laser Ablation And Their Antibacterial Activity, Hudhaifa M. Mohammed, Sahar Naji Rashid
Synthesis And Characterization Of Fe-Zn Bimetallic Nanoparticles Via Two-Step Laser Ablation And Their Antibacterial Activity, Hudhaifa M. Mohammed, Sahar Naji Rashid
Karbala International Journal of Modern Science
In this study, Nd: YAG laser at a wavelength of (1064 nm), energies of (300 and 400 mJ), and a pulse repetition rate of (3 Hz) was used to synthesize metallic nanoparticles from iron and zinc individually using a one-step pulsed laser ablation approach, followed by the two-step synthesis of bimetallic nanoparticles. The physical properties of the synthesized nanoparticles were then investigated using UV-visible (UV-Vis), X-ray diffraction (XRD), field-emission scanning electron microscopy (FESEM), and energy-dispersive X-ray (EDX) techniques. The results of characterization of the obtained NPs confirmed the formation of core-shell nanocomposites, as evidenced by the increased absorbance intensity of …
Er Stress Tolerance Is Regulated By Copper-Dependent Perk Kinase Activity., Sarah E. Bond Newton, Xinglong Shi, Noah R. Beratan, Julia Perhacs, Jitendra K. Arya, Margaret K. Bond, Tali Gidalevitz, Cagla Akay-Espinoza, Donita C. Brady, Kelly L. Jordan-Sciutto
Er Stress Tolerance Is Regulated By Copper-Dependent Perk Kinase Activity., Sarah E. Bond Newton, Xinglong Shi, Noah R. Beratan, Julia Perhacs, Jitendra K. Arya, Margaret K. Bond, Tali Gidalevitz, Cagla Akay-Espinoza, Donita C. Brady, Kelly L. Jordan-Sciutto
Farber Institute for Neuroscience Faculty Papers
Pancreatic/PKR-like endoplasmic reticulum (ER) kinase (PERK) is a kinase that, in response to ER stress, mediates dual homeostatic and pro-apoptotic signaling. Thus, intricate regulation is required for physiological function. Attempts to modulate PERK activity have shown that the determinants of adaptive vs. maladaptive signaling remain ambiguous. Here, with purified protein, we provide evidence that PERK binds copper, identifies residues required for interaction, and demonstrates that copper is necessary for kinase activity. Furthermore, cellular PERK activity can be modulated via copper availability, and this regulatory relationship can be manipulated to dictate ER stress tolerance. Critically, these phenomena translate to phenotypes in …
Sequence And Phylogenetic Analysis Of Citrus Maxima (Burm.) Merr. From Tomini Bay, Sulawesi Island, Based On The Maturase K Gene, Brenda Febrina Zusriadi, Novri Youla Kandowangko, Febriyanti Febriyanti
Sequence And Phylogenetic Analysis Of Citrus Maxima (Burm.) Merr. From Tomini Bay, Sulawesi Island, Based On The Maturase K Gene, Brenda Febrina Zusriadi, Novri Youla Kandowangko, Febriyanti Febriyanti
Makara Journal of Science
This study was conducted in the coastal area of Tomini Bay, Sulawesi Island, and it focused on Citrus maxima, a plant known for its unique fruit flesh colors, which range from yellow to pink, and its varying leaf stalk wings. The study aimed to analyze the variations in maturase K (matK) sequences, molecular characteristics, and phylogenetic relationships of two C. maxima samples from Tomini Bay compared to other C. maxima and Citrus species using data available in GenBank. The study utilized DNA barcoding with matK molecular markers, followed by phylogenetic tree construction using the maximum likelihood method …
Detection Method For Escherichia Coli Using Real-Time Polymerase Chain Reaction Targeting The Yhav Gene, Muktiningsih Nurjayadi, Anisa Fitriyanti, Royna Rahma Musie, Gusti Angieta Putri, Puan Aqila Azizah, Helzi Angelina, Grace Grace, Ananda Indah Putri Sihombing, Agus Setiawan, Jefferson Lynford Declan, Gladys Indira Putri, Dandy Akbar Juliansyah, Siti Fatimah, Ayu Berkahingrum, Irma Ratna Kartika, Fera Kurniadewi, Vira Saamia, Shyi-Tien Chen, Bassam Aboemolak, Hesham Ali El Enshasy
Detection Method For Escherichia Coli Using Real-Time Polymerase Chain Reaction Targeting The Yhav Gene, Muktiningsih Nurjayadi, Anisa Fitriyanti, Royna Rahma Musie, Gusti Angieta Putri, Puan Aqila Azizah, Helzi Angelina, Grace Grace, Ananda Indah Putri Sihombing, Agus Setiawan, Jefferson Lynford Declan, Gladys Indira Putri, Dandy Akbar Juliansyah, Siti Fatimah, Ayu Berkahingrum, Irma Ratna Kartika, Fera Kurniadewi, Vira Saamia, Shyi-Tien Chen, Bassam Aboemolak, Hesham Ali El Enshasy
Makara Journal of Science
Escherichia coli is a foodborne pathogenic bacterium that can cause diarrhea, while yhaV is a virulence-associated gene linked to the toxin–antitoxin system in E. coli. This study was aimed at evaluating the confirmation, specificity, and sensitivity of a yhaV gene primer using real-time polymerase chain reaction. The yhaV-targeting PCR successfully amplified a DNA fragment with an amplicon length of 207 bp (base pairs) under an annealing temperature optimized to a range of 54 °C to 62 °C via gradient PCR. The PCR using the primer pair produced a consistent Ct (cycle threshold) of 14.14 ± 0.05 and showed …
Employing Seca Recombinant Protein To Generate Polyclonal Antibodies For The Rapid Identification Of Phytoplasma, Arik Arubil Fatinah, Muhaimin Rifa'i, Estri Laras Arumingtyas, Sri Widyarti
Employing Seca Recombinant Protein To Generate Polyclonal Antibodies For The Rapid Identification Of Phytoplasma, Arik Arubil Fatinah, Muhaimin Rifa'i, Estri Laras Arumingtyas, Sri Widyarti
Makara Journal of Science
Phytoplasma, a plant pathogen that threatens plant health, can induce diseases such as yellow wilt, virescence, phyllody, and witches’ broom. Although early detection methods using polyclonal and monoclonal antibodies have been developed, synthetic peptides offer advantages such as higher titers, predictable antigenic characteristics and superior sensitivity and specificity. Epitope mapping plays a key role in designing peptide antigens and includes gene synthesis, transformation, expression assessment, large-scale production, and purification. A study using New Zealand male White rabbits was conducted to generate antibodies against phytoplasma. The SecA (395–470) sequence, obtained from the preprotein translocase meets the criteria of being non-homologous, nonallergic, …
Untangling The Roles Of Pulmonary Vagal Afferent Subsets With Inhaled Irritants, Teresa Darcey
Untangling The Roles Of Pulmonary Vagal Afferent Subsets With Inhaled Irritants, Teresa Darcey
USF Tampa Graduate Theses and Dissertations
The sensory nerves in the airways directly regulate critical defenses and indirectly regulate vital gas exchange. Airway function is largely controlled by the autonomic nervous system, and our understanding of its sensory regulation is directly connected to our ability to treat respiratory and cardiovascular pathologies. Airway sensory afferents are heterogeneous with respect to their electrophysiological properties, peptidergic capacity, and stimuli sensitivity, which at least in part dictate some of their various functions. There is evidence that embryological origin impacts reflex function: activation of the neural crest-derived population of sensory afferents has been shown to evoke the cough reflex whereas activation …
Tv Versus Video Games: Their Distinctive Effects On Adolescent Behavior And Academic Achievement, Faiaz Rahman, Kathy L. Schuh
Tv Versus Video Games: Their Distinctive Effects On Adolescent Behavior And Academic Achievement, Faiaz Rahman, Kathy L. Schuh
Mid-Western Educational Researcher
The current paper uses data collected from a publicly available, nationally representative data set to examine the effects of TV viewing and video gaming on adolescent behavioral problems and cognitive achievement. Results revealed that extended hours of TV viewing were associated with greater anxiety/depression and antisocial problems. On the other hand, extended hours of video gaming were associated with higher reading comprehension scores. Differing effects of TV viewing and gameplay by an individual’s sex was also found during the analysis. It is also important to note that the opposite effects that the two media has on outcomes, indicate that, although …
Chacahoula 2025, Volume 92, Alayna Pellegrin
Chacahoula 2025, Volume 92, Alayna Pellegrin
Chacahoula
The 2025 issue of Chacahoula includes December 2024 and May 2025 graduating classes, as well as stunning photography student life on the banks of Bayou Desiard. With features covering students, faculty, and staff, this year's time capsule preserves an academic year in the life of the University of Louisiana at Monroe.
Organic Glycinate Trace Minerals Improve Hatchability, Bone And Eggshell Breaking Strength, And Mineral Uptake During Late Laying Cycle In Layer Breeders, Mujtaba Akram Jahangir, Muhammad Muneeb, Muhammad Farooq Iqbal, Syeda Maryam Hussain, Syed Sohail Habib, Sohail Ahmad, Kasim Sakran Abass, Nasir Mukhtar, Rashed A. Alhotan, Ali R. Al Sulaiman, Ala E. Abudabos
Organic Glycinate Trace Minerals Improve Hatchability, Bone And Eggshell Breaking Strength, And Mineral Uptake During Late Laying Cycle In Layer Breeders, Mujtaba Akram Jahangir, Muhammad Muneeb, Muhammad Farooq Iqbal, Syeda Maryam Hussain, Syed Sohail Habib, Sohail Ahmad, Kasim Sakran Abass, Nasir Mukhtar, Rashed A. Alhotan, Ali R. Al Sulaiman, Ala E. Abudabos
Food and Animal Sciences Faculty Research
This study evaluated the effects of replacing inorganic trace minerals with organic glycinate forms at two inclusion levels in layer breeders during the late laying cycle over 6 weeks (66 to 72 weeks of age). For this, a total of 180 layer breeders (162 hens and 18 males; Lohmann LSL Ultralite) were randomly divided into three treatment groups having six replicates of nine hens each and one male for each replicate following a completely randomized design (CRD). The dietary treatments included: (1) Basal diet + inorganic trace minerals at breed recommended levels (ITM100), (2) Basal diet + organic trace minerals …
Where The Buffalo Roam: Ungulate Influences On Quaking Aspen And Willow Communities In The Greater Yellowstone Ecosystem, J. Boone Kauffman, Dian L. Cummings, Robert L. Beschta, William J. Ripple
Where The Buffalo Roam: Ungulate Influences On Quaking Aspen And Willow Communities In The Greater Yellowstone Ecosystem, J. Boone Kauffman, Dian L. Cummings, Robert L. Beschta, William J. Ripple
Aspen Bibliography
Quaking aspen (Populus tremuloides) and willows (Salix spp.) are keystone species of montane and shrub-steppe landscapes of the Western United States. Intact communities dominated by these species provide a wide range of ecosystem services, harboring an exceptional proportion of landscape biodiversity. Land use, especially overgrazing by large ungulates, is among the greatest threats to these ecosystems. To examine the effects of wild ungulates and levels of grazing at Yellowstone National Park (YNP) and the adjacent Gallatin National Forest, we sampled plant community composition and vegetation structure of aspen and willow communities both inside and outside of exclosures. …
Evaluation Of Robotic Swabbing And Fluorescent Sensing To Monitor The Hygiene Of Food Contact Surfaces, Siavash Mahmoudi, Clark Griscom, Pouya Sohrabipour, Yang Tian, Chaitanya Palleria, Philip G. Crandall, Dongyi Wang
Evaluation Of Robotic Swabbing And Fluorescent Sensing To Monitor The Hygiene Of Food Contact Surfaces, Siavash Mahmoudi, Clark Griscom, Pouya Sohrabipour, Yang Tian, Chaitanya Palleria, Philip G. Crandall, Dongyi Wang
Biological and Agricultural Engineering Faculty Publications and Presentations
Effective environmental monitoring is critical for preventing microbial and allergenic cross-contamination. However, manual swabbing methods, commonly used to verify hygienic conditions, are prone to inconsistent results because of variability in pressure, coverage, and techniques. Two novel solutions will be explored to address these challenges: a robotic swabbing system with tactile sensing control, and a fluorescence/absorbance spectrometer for non-contact, protein-based residue detection. The robotic system was evaluated against trained and untrained humans, measuring water pickup, surface coverage, and pressure consistency. Concurrently, the fluorescence system analyzed model poultry protein soil to correlate spectral patterns with contamination levels. The robotic system demonstrated statistically …
An Updated Checklist Of The Mammals Of Türkiye, Mustafa Sözen, Faruk Çolak
An Updated Checklist Of The Mammals Of Türkiye, Mustafa Sözen, Faruk Çolak
Turkish Journal of Zoology
Between 1982 and 2025, the number of extant wild mammal species worldwide rose from 4170 to 6706. The Turkish mammal fauna also showed a similar trend, with the number of mammal species listed for Türkiye rising from 89 to 173 in just 33 years, from 1989 to 2021. A shift in species numbers like this calls for regular updates to Türkiye’s mammal species lists as well as the preparation of new checklists. Apart from changes in the number of species, numerous taxonomic changes and rearrangements also lead to changes in mammal lists. We arranged an updated mammal checklist by reviewing …
A Comparison Between Phalangeal Skeletochronology And Cephalic Parietal Rings In Lizards, Marco A.L. Zuffi, Roberto Sacchi, Marcello Mezzasalma, Maria José Amaral, Miguel Angel Carretero, Fabio Maria Guarino
A Comparison Between Phalangeal Skeletochronology And Cephalic Parietal Rings In Lizards, Marco A.L. Zuffi, Roberto Sacchi, Marcello Mezzasalma, Maria José Amaral, Miguel Angel Carretero, Fabio Maria Guarino
Turkish Journal of Zoology
The well-defined, layered organization of the cephalic scales in many lacertilians could offer a noninvasive alternative for estimating the individual age of these vertebrates. This study aimed to validate the method of age determination based upon the cephalic scale rings in the genus Podarcis, comparing it to phalangeal skeletochronology, a widely used and highly reliable indirect method for estimating the age of ectotherm vertebrates. We analyzed individuals of P. bocagei (n = 48), P. muralis (n = 16) and P. siculus (n = 8). For each individual, we compared the number of cephalic layers with the number of lines of …
Nontarget Effects Of Abamectin On Cysts And Three Larval Stages Of Marine Microcrustacean Artemia Franciscana, Hashem Khandan Barani, Sahel Pakzad Toochaei, Narjes Sanchooli
Nontarget Effects Of Abamectin On Cysts And Three Larval Stages Of Marine Microcrustacean Artemia Franciscana, Hashem Khandan Barani, Sahel Pakzad Toochaei, Narjes Sanchooli
Turkish Journal of Zoology
Abamectin (ABM) is a widely used pesticide in agriculture and aquaculture worldwide. However, limited information is available on the toxic impacts of ABM on nontarget marine organisms, necessitating further research to investigate the toxic impacts of ABM on marine life. Hence, this study examined the acute (0.5–2.5 μg/L for 24 and 48 h) and chronic (0.125–0.5 μg/L for 7 days) toxicity of ABM on the marine microcrustacean Artemia franciscana under different incubation conditions and at different stages of development. To simulate a more realistic environmental scenario, some of the exposure tests were conducted in the presence of food or with …
Environmental Controls On Planktonic Community Variability And Ecosystem Responses In The Romanian Black Sea, Cristina Tabarcea, Elena Bișinicu, George-Emanuel Harcotă, Aurelia Țoțoiu, Oana Vlas, Elena Pantea, Luminita Lazar
Environmental Controls On Planktonic Community Variability And Ecosystem Responses In The Romanian Black Sea, Cristina Tabarcea, Elena Bișinicu, George-Emanuel Harcotă, Aurelia Țoțoiu, Oana Vlas, Elena Pantea, Luminita Lazar
Turkish Journal of Zoology
This study examines the structure, distribution, and environmental influences on planktonic communities in the Romanian Black Sea, based on data collected from Black Sea national monitoring stations in June 2023. We assessed the qualitative and quantitative composition of phytoplankton, microzooplankton, mesozooplankton, macrozooplankton, and ichthyoplankton, alongside key environmental factors such as temperature, salinity, dissolved oxygen, and nutrient concentrations (nitrite, nitrate, ammonium, phosphate, and silicate). The results highlight the dominance of dinoflagellates within the phytoplankton community, while copepods constitute the most abundant mesozooplankton group. Species from the Codonellidae family mainly represent microzooplankton diversity, while macrozooplankton is largely dominated by the scyphozoan Aurelia …
Cytotoxic And Genotoxic Effects Of Minor Temperature Changes And Zinc Oxide Nanoparticles Synthesized Using Plantago Major On Oncorhynchus Mykiss Gonadal Cells, Semra Çi̇çek, Sevda Işik
Cytotoxic And Genotoxic Effects Of Minor Temperature Changes And Zinc Oxide Nanoparticles Synthesized Using Plantago Major On Oncorhynchus Mykiss Gonadal Cells, Semra Çi̇çek, Sevda Işik
Turkish Journal of Zoology
Temperature changes and nanoparticle exposure have emerged as critical environmental stressors with potential cytotoxic and genotoxic effects on aquatic species. This study investigates the impact of zinc oxide nanoparticles (ZnO NPs), synthesized using Plantago major leaves, on Oncorhynchus mykiss gonadal (RTG-2) cells under different temperature conditions (23 °C, 24 °C, and 25 °C). RTG-2 cells were exposed to hexagonal ZnO NPs (≤100 nm) at concentrations of 6.25, 12.5, 25, 50, 75, and 100 μg/mL for 24 and 48 h. Cytotoxicity was assessed using the sulforhodamine B assay, and genotoxicity was evaluated via the comet assay. Results demonstrated that both temperature …
Green Synthesis Of Copper And Silver Nanostructured Particles From Eremurus Plant Extract And Comparison Of Their Optical Properties And Antibacterial Activities, Doaa Ayad Kamil, Ali F. Al-Rawaf, Mohammed Yarub Hani, H.H. Obeed, Tabarek Falah Deindee, Mohammed Ridha Shaeed
Green Synthesis Of Copper And Silver Nanostructured Particles From Eremurus Plant Extract And Comparison Of Their Optical Properties And Antibacterial Activities, Doaa Ayad Kamil, Ali F. Al-Rawaf, Mohammed Yarub Hani, H.H. Obeed, Tabarek Falah Deindee, Mohammed Ridha Shaeed
Karbala International Journal of Modern Science
In the present investigation, silver (Ag) and copper (Cu) nanostructured particles were synthesized from Eremurus plant by means of an environmentally benign methodology in which plant extracts served as both reducing and stabilizing agents. The resultant nanostructured particles were subjected to characterization techniques, including X-ray diffraction (XRD), Fourier-transform infrared spectroscopy (FTIR), field-emission scanning electron microscopy (FESEM), and energy-dispersive X-ray spectroscopy (EDXS). XRD analysis confirmed development of Ag nanostructured particles with face-centered cubic (fcc) structure and also Cu nanostructured particles with cubic form. Moreover, the average crystallite dimensions obtained for Ag and Cu were 18.3 nm and 65.7 nm, …
Fabrication And Characterization Of Epoxy Resin Co-Doped With 2,5-Diphenyloxazole And Cerium Fluoride Nanoparticles For Radiation Detection, Akapong Phunpueok, Jaruwan Seangrit, Sarawut Jaiyen, Krittiya Sreebunpeng, Wuttichai Chaiphaksa, Kewalee Nilgumhang, Voranuch Thongpool
Fabrication And Characterization Of Epoxy Resin Co-Doped With 2,5-Diphenyloxazole And Cerium Fluoride Nanoparticles For Radiation Detection, Akapong Phunpueok, Jaruwan Seangrit, Sarawut Jaiyen, Krittiya Sreebunpeng, Wuttichai Chaiphaksa, Kewalee Nilgumhang, Voranuch Thongpool
Karbala International Journal of Modern Science
This paper presents the fabrication and characterization of a plastic scintillator prepared from epoxy resin doped with 2,5-diphenyloxazole (PPO) and cerium fluoride nanoparticles (CeF3 NPs) for radiation detection. The CeF3 NPs were prepared by a chemical process and examined by X-ray diffraction (XRD) and scanning electron microscopy (SEM); it was found that the prepared particles were true CeF3 NPs with an average particle size of approximately 17 nm. The CeF3 NPs were co-doped with PPO into epoxy resin and formed into a plastic scintillator of 3 cm in diameter and 2 cm in length. Analysis of …
Fish Oil And Vernonia Amygdalina Leaves-Supplemented Biscuits Increased Insulin Secretion And Suppressed Pro-Inflammatory Cytokines In Type 2 Diabetic Wistar Rats, Omolola Soji-Omoniwa, Uthman Olanrewaju Abdulazeez, Christfavour Oluwaseyi Oloba, Samuel Olajuwon Kolawole, Johnson Opeyemi Olayinka, Emmanuel Olorunleke Oludipe, Anuoluwapo Faith Ajediti, Habib Tajudeen Yusuf
Fish Oil And Vernonia Amygdalina Leaves-Supplemented Biscuits Increased Insulin Secretion And Suppressed Pro-Inflammatory Cytokines In Type 2 Diabetic Wistar Rats, Omolola Soji-Omoniwa, Uthman Olanrewaju Abdulazeez, Christfavour Oluwaseyi Oloba, Samuel Olajuwon Kolawole, Johnson Opeyemi Olayinka, Emmanuel Olorunleke Oludipe, Anuoluwapo Faith Ajediti, Habib Tajudeen Yusuf
Al-Bahir
This research determined the effect of fish oil and Vernonia amygdalina-enriched biscuits (FVSB) on insulin sensitivity and inflammatory cytokines in type 2 diabetic rats. Forty-nine male rats were grouped into seven, i.e. A-G. Type 2 diabetes (T2DM) was induced in groups B-G by administering 230 mg/kg body weight [BW] NAD (ip) and 65 mg/kg BW streptozotocin (ip). Group A represented the control (Non-diabetic + unsupplemented biscuit), B (untreated diabetic), C (diabetic + 120 mg/kg BW metformin), D-F (diabetic + FVSB at 1g, 2g and 3g leaf inclusion respectively), and G (diabetic + conventional biscuit). The experiment lasted 35 days, …
Next-Gen Tools In Cancer Neuroscience, Vera Thiel, Debpali Sur, Caroline C Picoli, Tamara Mcerlain, Katalina Couto, David J Simon, Yuan Pan, Karen Olivia Dixon, Rajan P Kulkarni, Sebastien Talbot, Alexander Birbrair
Next-Gen Tools In Cancer Neuroscience, Vera Thiel, Debpali Sur, Caroline C Picoli, Tamara Mcerlain, Katalina Couto, David J Simon, Yuan Pan, Karen Olivia Dixon, Rajan P Kulkarni, Sebastien Talbot, Alexander Birbrair
Faculty, Staff and Student Publications
The emerging field of cancer neuroscience is rapidly evolving, driven by novel technologies and tools. These include advances in single-cell and spatial transcriptomics; genetic mouse models paired with automated high-throughput; and innovative optical electrophysiological approaches, optogenetics, chemogenetics, engineered viruses, and new methods for visualizing neuronal activity. Collectively, these technologies are revolutionizing how we investigate, manipulate, and characterize distinct components that contribute to the nervous system-cancer interface. In the present review, we discuss the key technologies that are closing the gap between oncology and neuroscience, highlighting the innovations that are propelling the cancer neuroscience field forward.
Rna/Dna-Binding Protein Tdp43 Regulates Dna Mismatch Repair Genes With Implications For Genome Stability, Vincent E Provasek, Albino Bacolla, Suganya Rangaswamy, Manohar Kodavati, Joy Mitra, Issa O Yusuf, Vikas H Malojirao, Velmarini Vasquez, Gavin W Britz, Guo-Min Li, Zuoshang Xu, Sankar Mitra, Ralph M Garruto, John A Tainer, Muralidhar L Hegde
Rna/Dna-Binding Protein Tdp43 Regulates Dna Mismatch Repair Genes With Implications For Genome Stability, Vincent E Provasek, Albino Bacolla, Suganya Rangaswamy, Manohar Kodavati, Joy Mitra, Issa O Yusuf, Vikas H Malojirao, Velmarini Vasquez, Gavin W Britz, Guo-Min Li, Zuoshang Xu, Sankar Mitra, Ralph M Garruto, John A Tainer, Muralidhar L Hegde
Faculty, Staff and Student Publications
TDP43 is an RNA/DNA-binding protein increasingly recognized for its role in neurodegenerative conditions, including amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). As characterized by its aberrant nuclear export and cytoplasmic aggregation, TDP43 proteinopathy is a hallmark feature in over 95% of ALS/FTD cases, leading to detrimental cytosolic aggregates and a reduction in nuclear functionality in neurons. Building on our prior work linking TDP43 proteinopathy to the accumulation of DNA double-strand breaks (DSBs) in neurons, the present investigation uncovers a novel regulatory relationship between TDP43 and DNA mismatch repair (MMR) gene expression. Here, we show that TDP43 depletion or overexpression …
Species Delineation, Phylogeography And Conservation Of Temperate Perches (Actinopterygii: Percichthyidae) From An Endemism And Climate Change Hotspot, Michael P. Hammer, David L. Morgan, Stephen J. Beatty, Mark G. Allen, Peter J. Unmack, Sean J. Buckley, Luciano B. Beheregaray, Jon Murphy, Mark Adams
Species Delineation, Phylogeography And Conservation Of Temperate Perches (Actinopterygii: Percichthyidae) From An Endemism And Climate Change Hotspot, Michael P. Hammer, David L. Morgan, Stephen J. Beatty, Mark G. Allen, Peter J. Unmack, Sean J. Buckley, Luciano B. Beheregaray, Jon Murphy, Mark Adams
Research outputs 2022 to 2026
Context: The south-western corner of Australia is a biodiversity hotspot that includes a freshwater fauna with a high proportion of endemic species. The temperate perches comprise nearly half of the obligate freshwater fishes of the region, representing important components of local ecosystems and are of significant conservation concern. Aims: Provide a spatially comprehensive molecular genetic assessment of species boundaries and major substructure for all local members of the family to better understand the interplay of ecology and environment across a common landscape. Methods: Nuclear markers (allozymes) and matrilineal (cytb) datasets were generated to infer genetic groupings and any instances of …
Essential Role Of Protein Kinase R In The Pathogenesis Of Pulmonary Veno-Occlusive Disease, Amit Prabhakar, Rahul Kumar, Meetu Wadhwa, Abhilash Barpanda, Joseph Lyons, Asavari Gowda, Simren Gupta, Ananyaa Arvind, Prajakta Ghatpande, Arun P. Wiita, Brian B. Graham, Giorgio Lagna, Akiko Hata
Essential Role Of Protein Kinase R In The Pathogenesis Of Pulmonary Veno-Occlusive Disease, Amit Prabhakar, Rahul Kumar, Meetu Wadhwa, Abhilash Barpanda, Joseph Lyons, Asavari Gowda, Simren Gupta, Ananyaa Arvind, Prajakta Ghatpande, Arun P. Wiita, Brian B. Graham, Giorgio Lagna, Akiko Hata
Biology
Pulmonary veno-occlusive disease (PVOD) is a rare and severe subtype of pulmonary arterial hypertension, characterized by progressive remodeling of small pulmonary arteries and veins with no therapies. Using a mitomycin C–induced (MMC-induced) rat model, we previously demonstrated that protein kinase R–mediated (PKR-mediated) integrated stress response (ISR) drives endothelial dysfunction and vascular remodeling. To determine whether PKR is the primary mediator of ISR and the pathogenesis, we treated control (Ctrl) and PKR-knockout (KO) mice with the same dose of MMC. Consistent with rat data, Ctrl mice displayed ISR activation, vascular remodeling, and pulmonary hypertension after MMC treatment, while KO mice showed …
Interleukin-6 (Il-6) Mediated Pathways In Nonalcoholic Fatty Liver Disease (Nafld) And Its Implications On Magnesium And Zinc Mineral Deficiencies: A Scoping Review, Marianne Koleng, Leann Nguyen
Interleukin-6 (Il-6) Mediated Pathways In Nonalcoholic Fatty Liver Disease (Nafld) And Its Implications On Magnesium And Zinc Mineral Deficiencies: A Scoping Review, Marianne Koleng, Leann Nguyen
Department of Nutrition Student Projects
The prevalence and incidence of Non-Alcoholic Fatty Liver Disease (NAFLD) is rising. In the United States alone, the prevalence of NAFLD is currently 38% and there has been a 50% increase over the last three decades. The present study investigated the role of ultratrace mineral deficiencies, specifically magnesium (Mg) and zinc (Zn), and if so, what nutritional interventions could be made to ameliorate or protect against the development of NAFLD. The role of trace and ultratrace minerals in pro-inflammatory cytokine pathways contributing to NAFLD, specifically Interleukin-6 (IL-6), were investigated. IL-6 is produced by hepatocytes and plays a crucial role in …
Investigating Potential Alzheimer's Disease Therapies Through An Agent-Based Model Of Impaired Microglia Metabolismmodeling Impaired Microglia Metabolism, Cheyenne Ty, Abigail Penland, John Gerving, Martin Mendoza-Ceja, Megan Pratt, Kamila Larripa
Investigating Potential Alzheimer's Disease Therapies Through An Agent-Based Model Of Impaired Microglia Metabolismmodeling Impaired Microglia Metabolism, Cheyenne Ty, Abigail Penland, John Gerving, Martin Mendoza-Ceja, Megan Pratt, Kamila Larripa
Spora: A Journal of Biomathematics
Alzheimer’s disease is the leading cause of dementia globally and is marked by amyloid-β plaque accumulation, decreased brain pH, disrupted metabolism, and increased permeability of the blood-brain barrier. Microglia, the resident immune cells of the central nervous system, are essential for maintaining brain homeostasis and are critically involved in the progression of AD. While microglia can initiate protective immune responses to injury and disease, dysregulated microglial metabolism may contribute to the exacerbation of Alzheimer's pathology. To investigate potential therapeutic strategies, we developed an agent-based model simulating the effects of exercise and metabolic enhancement on dysfunctional microglia. Our findings suggest that …
Comparison Of Pcr-Based Methods For The Detection Of Canned Tuna Species, Chloe P. Castanon, Denise Hernandez, Akshay N. Khetrapal, Rosalee S. Hellberg
Comparison Of Pcr-Based Methods For The Detection Of Canned Tuna Species, Chloe P. Castanon, Denise Hernandez, Akshay N. Khetrapal, Rosalee S. Hellberg
Food Science Faculty Articles and Research
Canned tuna is susceptible to mislabeling due to its high consumer demand, complex global supply chains, and range of prices. DNA barcoding of a short fragment of the mitochondrial control region (CR), termed the CR mini-barcode, has been established as an effective method for tuna species identification. However, the high level of DNA degradation in canned tuna products reduces the effectiveness of this method. Therefore, this study aimed to compare CR mini-barcoding to targeted (i.e., real-time or multiplex) PCR-based methods to determine the most effective approach for canned tuna species identification. DNA was extracted in duplicate from 24 canned tuna …
Erratum To “Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance [Turkish Journal Of Botany 49 (4) 2025 325-348 ] ”, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep
Erratum To “Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance [Turkish Journal Of Botany 49 (4) 2025 325-348 ] ”, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep
Turkish Journal of Botany
This erratum addresses an error concerning Figure 5 in the original published version of this article. During the typesetting process, Figure 5 was partially omitted, resulting in an incomplete figure being published.To correct this oversight and ensure the accuracy of the scholarly record, the complete Figure 5 is provided below for reference.
Link to the original article: https://doi.org/10.55730/1300-008X.2866
Floral Trait Diversity Supports Multiple Pollination Systems Across Urban Habitats In One Of The World's Greenest Cities, Ana Paula Sales De Araujo Franco, Maxwell Da Rosa Oliveira, Evaldo Benedito De Souza, Ingrid Lohani Degering Brand, Marcus Paulo Goncalves Rosa, Bruno Henrique Dos Santos Ferreira, Maria Rosângela Sigrist
Floral Trait Diversity Supports Multiple Pollination Systems Across Urban Habitats In One Of The World's Greenest Cities, Ana Paula Sales De Araujo Franco, Maxwell Da Rosa Oliveira, Evaldo Benedito De Souza, Ingrid Lohani Degering Brand, Marcus Paulo Goncalves Rosa, Bruno Henrique Dos Santos Ferreira, Maria Rosângela Sigrist
Turkish Journal of Botany
Green cities comprise a variety of habitats subject to different levels of anthropogenic pressure, ranging from completely unvegetated areas to vast green spaces such as linear parks. In this scenario, cities can support different ecological processes and ecosystem functions, which vary qualitatively and quantitatively between different habitat types along the urbanization gradient. Specifically, green spaces and ruderal plants can support pollination services in urban ecosystems, providing food resources (e.g., nectar, pollen, oil), reproduction supports (copulation sites), and nesting sites for pollinators. As a result, plant species and their floral resources are important for pollinator diversity and the maintenance of the …
Cells Stably Expressing Shrna Against Myo10 Display Altered Cell Motility, Joanna A. Mas, Chase E. Cristella, Vu Hao M. N. Phan, Lillian S. Wendt, Charlotte A. Rose, Abigail Ali, David F. Carpio, Christine Cole, Paige Embley, Jack E. Hoskins-Harris, Delia Johnson, Noelle Ledoux, Hannah W. Lwin, Sarah Salah, Erin Weisbart, Stacey J. Criswell, Omar A. Quintero-Carmona
Cells Stably Expressing Shrna Against Myo10 Display Altered Cell Motility, Joanna A. Mas, Chase E. Cristella, Vu Hao M. N. Phan, Lillian S. Wendt, Charlotte A. Rose, Abigail Ali, David F. Carpio, Christine Cole, Paige Embley, Jack E. Hoskins-Harris, Delia Johnson, Noelle Ledoux, Hannah W. Lwin, Sarah Salah, Erin Weisbart, Stacey J. Criswell, Omar A. Quintero-Carmona
Biology Faculty Publications
Myosin-X (MYO10) is an actin-based motor protein involved in cytoskeletal dynamics, membrane interactions, and integrin-mediated adhesion. To investigate MYO10's cellular roles, we generated MYO10 knockdown (MYO10KD) HeLa and COS7 cell lines using lentiviral shRNA. Compared to wild-type cells, both MYO10KD lines showed reduced proliferation and impaired cell migration in wound assays. Additionally, there were fewer edge filopodia in HeLa cells. Furthermore, MYO10KD cells demonstrated increased spreading on laminin-coated substrates, suggesting altered integrin activation and cytoskeletal linkage. Our results reinforce MYO10’s importance in cell proliferation, adhesion, and migration. These MYO10KD lines provide an accessible cell culture model for future study of …