Digital Commons Network^™

Refining Aquatic Macroinvertebrate Community Metrics For The Assessment Of Headwater Streams In New York State, Brian T. Duffy

Legacy Theses & Dissertations (2009 - 2024)

The River Continuum Concept describes the structural and functional shift that occurs from sensitive headwater streams to the lowest reaches of large, non-wadeable rivers. New York State (NYS) maintains a long-established biological monitoring program using macroinvertebrate community assemblages for water quality assessment. However, headwater streams are rarely assessed, and no reference models are available, except those calibrated for lower-continuum wadeable streams and rivers. Current patterns of rural landuse change emphasize the need for more accurate assessment of previously neglected headwaters, in order to set natural reference standards for more accurate assessments of water quality. Ecoregion, drainage area (DA), elevation (elev.), …

Management Of The Sawmill Slough Preserve, University Of North Florida, Justin M. Lemmons, Charles Hubbuch, Anthony M. Rossi

Professional Presentations

Poster presented at the 2014 Ecological Society of America (ESA) 99th Annual Meeting: From Oceans to Mountains. Sacramento, California.

Climate Change And Mediterranean Seagrass Meadows: A Synopsis For Environmental Managers, G Pergent, H Bazairi, C N. Bianchi, C F. Boudouresque, M C. Buia, S Calvo, P Clabaut, M Harmelinvivien, M Angel Mateo, M Montefalcone, C Morri, S Orfanidis, C Pergentmartini, R Semroud, Oscar Serrano, T Thibaut, A Tomasello, M Verlaque

Research outputs 2014 to 2021

This synopsis focuses on the effects of climate change on Mediterranean seagrasses, and associated communities, and on the contribution of the main species, Posidonia oceanica, to the mitigation of climate change effects through sequestering carbon dioxide. Whilst the regression of seagrass meadows is well documented, generally linked to anthropogenic pressures, global warming could be a cause of new significant regression, notably linked to the introduction of exotic species, the rise of Sea-Surface Temperature (SST), and relative sea level. Seagrass communities could also be affected by climate change through the replacement of high structural complexity seagrass species by species of lower …

Setting Goals And Choosing Appropriate Reference Sites For Restoring Mine Pit Lakes As Aquatic Ecosystems: Case Study From South West Australia, Eddie J. Van Etten, C. D. Mccullough, Mark A. Lund

Research outputs 2014 to 2021

Pit lakes may form when open cut mining leaves a pit void behind that fills with ground and surface water. Often replacing terrestrial ecosystems that existed prior to mining, the pit lake may offer an alternative ecosystem with aquatic biodiversity values that can be realised through planned restoration. Restoration theory and mine closure regulatory requirements guides us toward restoring disturbed systems towards landscapes that are of regional value and relevance. However, how do we identify a restoration target for a novel aquatic habitat that did not exist prior to the new post-mining landscape? This paper presents a process of first …

What Do Elevated Background Contaminant Concentrations Mean For Amd Risk Assessment And Management In Western Australia?, C. D. Mccullough, J. J Pearce

Research outputs 2014 to 2021

Water quality contaminants include a range of naturally occurring chemicals that can cause degradation of aquatic ecosystem water values when concentration ranges exceed biological tolerances. Both acid and metalliferous drainage (AMD) and acid sulfate soil (ASS) can increase contaminant concentrations through reduced pH and increased solute concentrations especially of toxic metals and metalloids. Water quality guideline criteria are typically used to maintain existing end use value objectives when managing AMD/ASS-affected waters. However, surface and ground waters of catchments comprising mining resources often show elevated solute concentrations in baseline conditions due to their unique geologies. From an AMD and ASS risk …

The Effects That Liquid And Solid Cattle Manure Have On The Water Quality Of Drainage Ditches In Putnam County, Ohio, Janelle Horstman

Honors Projects

Lake Erie has experienced harmful algal blooms with increased frequency since the mid-1990s due to excess nutrients from Rivers, such as the Maumee River, and largely agricultural watersheds. Nonpoint source pollution from agriculture contributes to eutrophication, algal blooms, and the degradation of water quality. This creates stress on aquatic fauna, reduced aesthetic quality, odor, and limits of the water for usage of drinking, recreation, and industry. This research paper asks what the contributions of having access to manure application records, soil records, and information about antibiotics have on what is known about manure management and antibiotic resistance, which has been …

Self-Imposed Length Limits In Recreational Fisheries, Christopher J. Chizinski, Dustin R. Martin, Keith L. Hurley, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

A primary motivating factor on the decision to harvest a fish among consumptive-orientated anglers is the size of the fish. There is likely a cost-benefit trade-off for harvest of individual fish that is size and species dependent, which should produce a logistic-type response of fish fate (release or harvest)as a function of fish size and species. We define the self-imposed length limit as the length at which a captured fish had a 50% probability of being harvested, which was selected because it marks the length of the fish where the probability of harvest becomes greater than the probability of release. …

Discontinuities, Cross-Scale Patterns, And The Organization Of Ecosystems, Kirsty L. Nash, Craig R. Allen, David G. Angeler, Chris Barichievy, Tarsha Eason, Ahjond S. Garmestani, Nicholas A. J. Graham, Dean Granholm, Melinda Knutson, R. John Nelson, Magnus Nyström, Craig A. Stow, Shana M. Sundstrom

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Ecological structures and processes occur at specific spatiotemporal scales, and interactions that occur across multiple scales mediate scale-specific (e.g., individual, community, local, or regional) responses to disturbance. Despite the importance of scale, explicitly incorporating a multi-scale perspective into research and management actions remains a challenge. The discontinuity hypothesis provides a fertile avenue for addressing this problem by linking measureable proxies to inherent scales of structure within ecosystems. Here we outline the conceptual framework underlying discontinuities and review the evidence supporting the discontinuity hypothesis in ecological systems. Next we explore the utility of this approach for understanding cross-scale patterns and the …

Predicted Avian Responses To Bioenergy Development Scenarios In An Intensive Agricultural Landscape, Daniel R. Uden, Craig R. Allen, Rob B. Mitchell, Tim D. Mccoy, Qingfeng Guan

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Conversion of native prairie to agriculture has increased food and bioenergy production but decreased wildlife habitat. However, enrollment of highly erodible cropland in conservation programs has compensated for some grassland loss. In the future, climate change and production of second-generation perennial biofuel crops could further transform agricultural landscapes and increase or decrease grassland area. Switchgrass (Panicum virgatum) is an alternative biofuel feedstock that may be economically and environmentally superior to maize (Zea mays) grain for ethanol production on marginally productive lands. Switchgrass could benefit farmers economically and increase grassland area, but there is uncertainty as to how conversions between rowcrops, …

Introduction: Social-Ecological Resilience And Law, Ahjond S. Garmestani, Craig R. Allen, Craig Anthony Arnold, Lance H. Gunderson

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Environmental law is intimately connected to ecological concepts and understanding. The legal instruments, institutions, and administration of law in the United States are predicated on assumptions that nature is globally stable and that the inherent variability in ecological systems is bounded. This current legal framework is based upon an understanding of ecological systems operating near an equilibrium, or if disturbed, moving back toward an equilibrium. Such assumptions make much current environmental law ill-suited for many pressing environmental issues (Ruhl 1999; Garmestani et al. 2009; Craig 2010; Verchick 2010; Benson and Garmestani 2011). Emerging environmental challenges, such as cross-boundary water governance …

Self-Confidence Of Anglers In Identification Of Freshwater Sport Fish, Christopher J . Chizinski, D. R. Martin, K. L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Although several studies have focused on how well anglers identify species using replicas and pictures, there has been no study assessing the confidence that can be placed in angler’s ability to identify recreationally important fish. Understanding factors associated with low self-confidence will be useful in tailoring education programmes to improve self-confidence in identifying common species. The purposes of this assessment were to quantify the confidence of recreational anglers to identify 13 commonly encountered warm water fish species and to relate self-confidence to species availability and angler experience. Significant variation was observed in anglers selfconfidence among species and levels of self-declared …

Toxicity Of Copper Sulfate And Rotenone To Chinese Mystery Snail (Bellamya Chinensis), Danielle M. Haak, Bruce J. Stephen, Robert A. Kill, Nicholas A. Smeenk, Craig R. Allen, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The Chinese mystery snail (Bellamya chinensis) is a freshwater snail native to Southeast Asia, Japan, and Russia and is currently classified as an invasive species in at least 27 states in the USA. The species tolerates a wide range of environmental conditions, making management of established populations difficult. We tested the efficacy of two traditional chemical treatments, rotenone and copper sulfate, on the elimination of adult Chinese mystery snails in laboratory experiments. All snails (N=50) survived 72-hour exposure to rotenone-treated lake water, and 96% (N=25) survived 72-hour exposure to pre-determined rotenone concentrations of 0.25, 2.5, and 25.0 mg/L. …

Transdisciplinary Application Of Cross-Scale Resilience, Shana M. Sundstrom, David G. Angeler, Ahjond S. Garmestani, Jorge-H. Garcia, Craig R. Allen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The cross-scale resilience model was developed in ecology to explain the emergence of resilience from the distribution of ecological functions within and across scales, and as a tool to assess resilience. We propose that the model and the underlying discontinuity hypothesis are relevant to other complex adaptive systems, and can be used to identify and track changes in system parameters related to resilience. We explain the theory behind the cross-scale resilience model, review the cases where it has been applied to non-ecological systems, and discuss some examples of social-ecological, archaeological/ anthropological, and economic systems where a cross-scale resilience analysis could …

Status Of Native Stream Fishes Within Selected Protected Areas Of The Niobrara River In Western Nebraska, Jonathan J. Spurgeon, Richard H. Stasiak, George R. Cunningham, Kevin L. Pope, Mark A. Pegg

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Lotic systems within the Great Plains are characterized by highly fl uctuating conditions through both space and time. Fishes inhabiting these systems have adopted specifi c life- history strategies to survive in such environments; however, anthropogenic disturbance to prairie streams has resulted in declines and extirpation of many native stream fi shes. Terrestrial protected areas (i.e., parks and reserves) are designated to support native fl ora and fauna and, it is assumed, to provide protection to native fi shes. We assessed the presence and relative abundance of stream fi sh populations within protected areas along the Niobrara River in western …

Consuming Fire Ants Reduces Northern Bobwhite Survival And Weight Gain, P. Evans Myers, Craig R. Allen, Hannah E. Birge

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Northern bobwhite quail, Colinus virginianus (L.) (Galliformes: Odontophoridae), population declines are well documented, but pinpointing the reasons for these decreases has proven elusive. Bobwhite population declines are attributed primarily to loss of habitat and land use changes. This, however, does not entirely explain population declines in areas intensively managed for bobwhites. Although previous research demonstrates the negative impact of red imported fire ant (Solenopsis invicta Buren) (Hymenoptera: Formicidae) on northern bobwhites, the mechanisms underlying this effect are largely unknown. To meet the protein demands of early growth and development, bobwhite chicks predominantly consume small insects, of which ants are …

Quantifying Spatial Scaling Patterns And Their Local And Regional Correlates In Headwater Streams: Implications For Resilience, Emma Göthe, Leonard Sandin, Craig R. Allen, David G. Angeler

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The distribution of functional traits within and across spatiotemporal scales has been used to quantify and infer the relative resilience across ecosystems. We use explicit spatial modeling to evaluate within- and cross-scale redundancy in headwater streams, an ecosystem type with a hierarchical and dendritic network structure. We assessed the cross-scale distribution of functional feeding groups of benthic invertebrates in Swedish headwater streams during two seasons. We evaluated functional metrics, i.e., Shannon diversity, richness, and evenness, and the degree of redundancy within and across modeled spatial scales for individual feeding groups. We also estimated the correlates of environmental versus spatial factors …

2014 Nebraska Water Monitoring Programs Report, Marty Link, Ryan Chapman

Nebraska Department of Environmental Quality: Reports

The Nebraska Department of Environmental Quality (NDEQ) is charged with monitoring, assessing, and to the extent possible, managing the state’s water resources. The purpose of this work is to protect and maintain high quality water and encourage or execute activities to improve poor water quality. Monitoring is done on nearly 17,000 miles of flowing rivers and streams, more than 134,000 acres of surface water in lakes and reservoirs, as well as the vast storage of groundwater in Nebraska’s aquifers.

Nebraska Water Center Annual Report 2014, Nebraska Water Center

Nebraska Water Center: Administrative Materials

Letter from the Director

I am pleased to present this annual report on the activities, finances and many accomplishments of the Nebraska Water Center (NWC) during 2013 and 2014, a time when the NWC is celebrating its Golden Anniversary. More than being a simple look back at where we’ve been and what we have accomplished over the past year, this report looks forward to the complex challenges and exciting opportunities that lie ahead of us. We are now an integral part of the Robert B. Daugherty Water for Food Institute (DWFI), a growing global institute focused on one of the …

Mangroves Facing Climate Change: Landward Migration Potential In Response To Projected Scenarios Of Sea Level Rise, D. Di Nitto, G. Neukermans, N. Koedam, H. Defever, F. Pattyn, J. G. Kairo, F. Dahdouh-Guebas

East Africa

Mangrove forests prominently occupy an intertidal boundary position where the effects of sea level rise will be fast and well visible. This study in East Africa (Gazi Bay, Kenya) addresses the question of whether mangroves can be resilient to a rise in sea level by focusing on their potential to migrate towards landward areas. The combinatory analysis between remote sensing, DGPS-based ground truth and digital terrain models (DTM) unveils how real vegetation assemblages can shift under different projected (minimum (+9 cm), relative (+20 cm), average (+48 cm) and maximum (+88 cm)) scenarios of sea level rise (SLR). Under SLR scenarios …

Moving To A New Paradigm: A Reflection On Ethics, Sara Bajor '15

Richard T. Schellhase Essay Prize in Ethics

No abstract provided.

Monitoring Ship Noise To Assess The Impact Of Coastal Developments On Marine Mammals, Nathan D. Merchant, Enrico Pirotta, Tim R. Barton, Paul M. Thompson

Biology - All Scholarship

The potential impacts of underwater noise on marine mammals are widely recognised, but uncertainty over variability in baseline noise levels often constrains efforts to manage these impacts. This paper characterises natural and anthropogenic contributors to underwater noise at two sites in the Moray Firth Special Area of Conservation, an important marine mammal habitat that may be exposed to increased shipping activity from proposed offshore energy developments. We aimed to establish a pre-develop- ment baseline, and to develop ship noise monitoring methods using Automatic Identification System (AIS) and time-lapse video to record trends in noise levels and shipping activity. Our results …

Changing The Climate Narrative: How A Long-Term Climate Change Might Save Our Lives, Natalie P. Harreld

CMC Senior Theses

The goal of this paper is to offer new insights into the climate change debate by shifting away from the heated anthropologic arguments that dominate politics, media, and popular science. Instead, I choose to rely on the long-term impacts of a changing climate on our planet. The paper begins with a break down of key processes involved in short-term and long-term climate change, using the latest research. After a foundational understanding of climate sciences is established, we will discuss the failure of the climate change debate in educating the general public about the facts of a changing climate. Finally, the …

Characterizing Wetland Hydrology, Chemistry, And Soils For An Endemic Crayfish, The Piedmont Blue Burrower, Jess H. Gilmer Ii

Theses and Dissertations

Anthropogenic alteration of Earth's ecosystems has pushed global biodiversity into a state of crisis. Freshwater species have been particularly vulnerable, with crayfish ranking as the second most imperiled taxonomic group in North America. Primary burrowers represent only 15% of crayfish species in North America; however, they constitute 32% of imperiled crayfish. Despite their conservation importance, little is known about the ecology of burrowing crayfish. To advance our knowledge about the habitat characteristics of burrowing crayfish, groundwater hydrology, water chemistry, and soil properties were assessed to determine their importance for the state-listed endangered, primary burrower Cambarns harti. Groundwater hydrology and …

The Potential Release Of Phosphorus In Floodplains, Maria S. Rossetti, Nicole K. Ownby, Erin Scott, Brian E. Haggard

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

In the Illinois River Watershed, there has been growing concern over elevated phosphorus concentrations in the water column. This study evaluated how much phosphorus is contributed from floodplain soils into surface waters, examining the relationship between the flux of phosphorus released and the amount of phosphorus stored in the soil. This was investigated by artificially inundating soil cores from four sites and determining the soluble reactive phosphorus concentrations of the overlying water and the levels of Water and Mehlich-3 extractable phosphorus in the soil. The flux of phosphorus to the overlying water ranged from 0.43 to 6.61 mg m-2 hr-1 …

Reducing Water Extractable Phosphorus In Poultry Litter Using Chitosan Treatment, Zachary Simpson, Brina Smith, David A. Zaharoff, Brian E. Haggard

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Phosphorus (P) is an important factor in the eutrophication of freshwater, and watershed sources include effluent discharges and the landscape. Poultry litter applied to the landscape can be a potential source of P, which is dependent on rainfall, runoff and dissolution. Chitosan, the deacetylated form of the biopolymer chitin, has been shown to have an effect on reducing water extractable phosphorus (WEP) in poultry litter when applied as a powder. The intent of this study was to measure the effect that poultry litter treatment (PLT), acetic acid and incubation time have on chitosan’s ability to reduce WEP in poultry litter. …

A Quantitative Analysis Of White-Tailed Deer Harvest Across States And Counties, Rebecca Lynne Cain

Theses and Dissertations

White-tailed deer (Odocoileus virginianus) have gone from locally extirpated to overabundant in many areas in the United States since the early 1900s. Ecosystems with chronically overabundant populations experience many disastrous effects resulting from the selective browsing behavior of deer. White-tailed deer are managed at the state level resulting in different management strategies, harvest data collection, and deer management goals between states. However recreational hunting is the primary tool used by wildlife agencies to control population growth. As such, it is beneficial to understand the influence each regulatory variable has on white-tailed deer harvest.

For this research, I compiled historical harvest …

Concordance Between Phylogeographic And Biogeographic Boundaries In The Coral Triangle: Conservation Implications Based On Comparative Analyses Of Multiple Giant Clam Species, Timery S. Deboer, Maria Rio Abdon Naguit, Mark V. Erdmann, Maria Carmen A. Ablan-Lagman, Ambariyanto, Kent E. Carpenter, Abdul Hamid A. Toha, Paul H. Barber

Biological Sciences Faculty Publications

Marine habitats are in decline worldwide, precipitating a strong interest in marine conservation. The use of biogeographic data to designate ecoregions has had significant impacts on terrestrial conservation efforts. However, classification of marine environments into ecoregions has only become available in the last several years, based on biogeographic data supplemented by geomorphology, ocean currents, and water temperatures. Here we use a comparative phylogeographic approach to test for concordant phylogeographic patterns in three closely related species of Tridacna giant clams across the Coral Triangle, the most biodiverse marine region in the world and one of the most threatened. Data from a …

From Climate Action To Coalition: Ypsilanti And Emu As Models For Sustainability, Erica Mooney

Senior Honors Theses and Projects

Inspired by leading EMU's engagement with Ypsilanti's climate Action Plan in 2011, a journey began to discovering ways to cultivate healthy relationships through sustainability. How have other universities addressed climate change? How have other municipalities work with schools addressing sustainability? I explored national programs as well as a thorough review of Michigan's other public universitites. This thesis is a mix of best practices research and a proposal to both city and school administrators and stakeholders. Reviewing what other campuses and towns have done to address environmental and social justice, and the complex realms of economic and community development, a coalition …

Investigation Of Angiogenic Effects Of Bioactive Borate Glass Microfibers And Beads In A Rodent Model, Richard Jeffrey Watters

Masters Theses

"The primary objective of this research project was to evaluate the effects of three different compositions of bioactive glass microfibers (45S5, 13-93B3, and 13-93B3Cu) and bioactive glass beads (13-93, 13-93B3, and 13-93B3Cu) on angiogenesis in subcutaneous tissue in the SKH1 'hairless' mouse. Microvascular responses to the bioactive glass implants were investigated via three experimental approaches: noninvasive vital imaging of microvasculature in dorsal skin windows; quantitative histomorphometry of microvascular densities; and quantitative PCR measurements of mRNA expression of pro-angiogenic cytokines VEGF and FGF-2. The live imaging of dorsal skin window preparations in the hairless SKH1 showed the formation of a halo-like …

Ecology Of A Declining Great Plains Fish, Fundulus Sciadicus, In The Missouri Ozarks, Gregory Travis Thompson

Masters Theses

"Anthropogenic habitat disturbances are of growing concern due to their impacts on native biota, especially in freshwater ecosystems. Damming, channelization, urbanization, wetland draining, and non-native fish introductions all play large roles in habitat homogeneity, fragmentation, and species competition. This has negative effects on native fish and invertebrate species. In the Midwestern United States, the plains topminnow (Fundulus sciadicus) has been declining across its range, to the point of becoming a species of special concern in Missouri. This is possibly due to a combination of the above anthropogenic habitat disturbances. To better understand the ecology of the plains topminnow …