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Effect Of Eis In A 3d Printed Non-Planer Array Patterned Microfluidic Devices, Shanzida Kabir, Hector Zepeda Saenz, Nazmul Islam Feb 2024

Effect Of Eis In A 3d Printed Non-Planer Array Patterned Microfluidic Devices, Shanzida Kabir, Hector Zepeda Saenz, Nazmul Islam

Electrical and Computer Engineering Faculty Publications

In recent years 3D printing is becoming popular among researchers for its reliability, cost-effective materials, and ease of use without having costly clean rooms. In this work we report the process of fabrication of an array patterned microfluidic device with its effect in Electrochemical impedance spectroscopy (EIS) and particle manipulator. With the optimized design of channel geometry and electrode pattern, this device can use in different lab-on-a-chip applications. A 3D printed microfluidic channel fabrication process is presented here along with a CAD drawing with microstructural dimension analysis. EIS is an expeditiously developing method used in characterizing materials and interfaces. By …


Identifying Sick Cells From High-Resolution Solid-State Micropore Data, Abdul Hafeez, Azhar Ilyas, Ali R. Butt, Samir M. Iqbal Feb 2024

Identifying Sick Cells From High-Resolution Solid-State Micropore Data, Abdul Hafeez, Azhar Ilyas, Ali R. Butt, Samir M. Iqbal

Mechanical Engineering Faculty Publications

Early detection of diseases such as cancer can drastically improve prognosis and treatment. To this end, solid-state micropores can measure distinct mechanical properties of diseased cells from their translocation behavior — detected as pulses in the temporal data stream of ionic current — and help diagnose diseases at early stages. However, the obstacle in such approaches is that the accuracy of the sensor is affected by noise, making the pulse detection task too subjective. This is inefficient especially when the disease-relevant data is only a fraction of the total acquired data. Thus, it is important to intelligently automate the detection …


High-Yield And Rapid Isolation Of Extracellular Vesicles By Flocculation Via Orbital Acoustic Trapping: Float, Joseph Rufo, Peiran Zhang, Zeyu Wang, Yuyang Gu, Kaichun Yang, Joseph Rich, Chuyi Chen, Ruoyu Zhong, Ke Jin, Je He, Jianping Xia, Ke Li, Jiarong Wu, Yingshi Ouyang, Yoel Sadovsky, Luke P. Lee, Tony Jun Huang Feb 2024

High-Yield And Rapid Isolation Of Extracellular Vesicles By Flocculation Via Orbital Acoustic Trapping: Float, Joseph Rufo, Peiran Zhang, Zeyu Wang, Yuyang Gu, Kaichun Yang, Joseph Rich, Chuyi Chen, Ruoyu Zhong, Ke Jin, Je He, Jianping Xia, Ke Li, Jiarong Wu, Yingshi Ouyang, Yoel Sadovsky, Luke P. Lee, Tony Jun Huang

Faculty Publications

Extracellular vesicles (EVs) have been identified as promising biomarkers for the noninvasive diagnosis of various diseases. However, challenges in separating EVs from soluble proteins have resulted in variable EV recovery rates and low purities. Here, we report a high-yield ( > 90%) and rapid ( <  10 min) EV isolation method called FLocculation via Orbital Acoustic Trapping (FLOAT). The FLOAT approach utilizes an acoustofluidic droplet centrifuge to rotate and controllably heat liquid droplets. By adding a thermoresponsive polymer flocculant, nanoparticles as small as 20 nm can be rapidly and selectively concentrated at the center of the droplet. We demonstrate the ability of FLOAT to separate urinary EVs from the highly abundant Tamm-Horsfall protein, addressing a significant obstacle in the development of EV-based liquid biopsies. Due to its high-yield nature, FLOAT reduces biofluid starting volume requirements by a factor of 100 (from 20 mL to 200 µL), demonstrating its promising potential in point-of-care diagnostics.


Left Ventricle Function And Post-Transcriptional Events With Exercise Training In Pigs, Stephanie L. Samani, Shayne C. Barlow, Lisa A. Freeburg, Traci L. Jones, Marlee Poole, Mark A. Sarzynski Ph.D., Faha, Facsm, Michael R. Zile, Tarek Shazly, Francis G. Spinale Feb 2024

Left Ventricle Function And Post-Transcriptional Events With Exercise Training In Pigs, Stephanie L. Samani, Shayne C. Barlow, Lisa A. Freeburg, Traci L. Jones, Marlee Poole, Mark A. Sarzynski Ph.D., Faha, Facsm, Michael R. Zile, Tarek Shazly, Francis G. Spinale

Faculty Publications

Background

Standardized exercise protocols have been shown to improve overall cardiovascular fitness, but direct effects on left ventricular (LV) function, particularly diastolic function and relation to post-transcriptional molecular pathways (microRNAs (miRs)) are poorly understood. This project tested the central hypothesis that adaptive LV remodeling resulting from a large animal exercise training protocol, would be directly associated with specific miRs responsible for regulating pathways relevant to LV myocardial stiffness and geometry.

Methods and results

Pigs (n = 9; 25 Kg) underwent a 4 week exercise training protocol (10 degrees elevation, 2.5 mph, 10 min, 5 days/week) whereby LV chamber stiffness (KC) …


Performance Analysis And Evaluation Of Image Processing Techniques, Dcnn And Bsn Model For Detection And Classification Of Diabetic Retinopathy, Sudha S Feb 2024

Performance Analysis And Evaluation Of Image Processing Techniques, Dcnn And Bsn Model For Detection And Classification Of Diabetic Retinopathy, Sudha S

Theses and Dissertations

Diabetes is a disorder that arises when blood sugar level increases. Insufficient secretion of insulin hormone is the ground for the evolution of diabetes, and it affects most of the critical organs in our body. Diabetes causes leakage of blood in the retinal blood vessels, inducing an eye disease, Diabetic Retinopathy (DR). The visual identification of micro features in fundus images makes the clinicians complex and challenging tasks. Therefore, timely diagnosis and proper treatment can prevent eye blindness. This research is proposed to identify and classify diabetic retinopathy using an Image Processing technique, Deep Convolutional Neural Network (DCNN), Biological Sensor …


Left Ventricle Function And Post-Transcriptional Events With Exercise Training In Pigs, Stephanie L. Samani, Shayne C. Barlow, Lisa A. Freeburg, Traci L. Jones, Marlee Poole, Mark A. Sarzynski Facsm, Michael R. Zile, Tarek Shazly, Francis G. Spinale Feb 2024

Left Ventricle Function And Post-Transcriptional Events With Exercise Training In Pigs, Stephanie L. Samani, Shayne C. Barlow, Lisa A. Freeburg, Traci L. Jones, Marlee Poole, Mark A. Sarzynski Facsm, Michael R. Zile, Tarek Shazly, Francis G. Spinale

Faculty Publications

Background

Standardized exercise protocols have been shown to improve overall cardiovascular fitness, but direct effects on left ventricular (LV) function, particularly diastolic function and relation to post-transcriptional molecular pathways (microRNAs (miRs)) are poorly understood. This project tested the central hypothesis that adaptive LV remodeling resulting from a large animal exercise training protocol, would be directly associated with specific miRs responsible for regulating pathways relevant to LV myocardial stiffness and geometry.

Methods and results

Pigs (n = 9; 25 Kg) underwent a 4 week exercise training protocol (10 degrees elevation, 2.5 mph, 10 min, 5 days/week) whereby LV chamber stiffness (KC) …


Analysis Of The Impact Of Water Treatment By Liming Sedimentation And Dredging On The Content Of Heavy Metals In Fish Intended For Consumption, Asfie Maidie, Ismail Fahmy Almadi, Muchlis Efendi, Rekha Yusdha Nilawardhani, Komsanah Sukarti, Henny Pagoray Feb 2024

Analysis Of The Impact Of Water Treatment By Liming Sedimentation And Dredging On The Content Of Heavy Metals In Fish Intended For Consumption, Asfie Maidie, Ismail Fahmy Almadi, Muchlis Efendi, Rekha Yusdha Nilawardhani, Komsanah Sukarti, Henny Pagoray

Journal of Sustainable Mining

The present study sought to determine the presence of metals and arsenic, a metalloid, among the fish of a coal mine reservoir, where the water was treated regularly through liming sedimentation combined with dredging, and the fish living in an adjoining river. The potential hazard of metals in fish as human food was analyzed. Except for selenium (an important metal to the human body), which was higher among the river fish than in the reservoir fish (P < 0.01), there were no particular patterns of other studied metals found in either habitat (P > 0.05), and apparently not related to the fish family that consumed by local people. Measurements of bioaccumulation factor (BAF) yielded scattered values from …


Computational Discovery Of Microstructured Composites With Optimal Stiffness-Toughness Trade-Offs, Beichen Li, Bolei Deng, Wan Shou, Tae-Hyun Oh, Yuanming Hu, Yiyue Luo, Liang Shi, Wojciech Matusik Feb 2024

Computational Discovery Of Microstructured Composites With Optimal Stiffness-Toughness Trade-Offs, Beichen Li, Bolei Deng, Wan Shou, Tae-Hyun Oh, Yuanming Hu, Yiyue Luo, Liang Shi, Wojciech Matusik

Mechanical Engineering Faculty Publications and Presentations

The conflict between stiffness and toughness is a fundamental problem in engineering materials design. However, the systematic discovery of microstructured composites with optimal stiffness-toughness trade-offs has never been demonstrated, hindered by the discrepancies between simulation and reality and the lack of data-efficient exploration of the entire Pareto front. We introduce a generalizable pipeline that integrates physical experiments, numerical simulations, and artificial neural networks to address both challenges. Without any prescribed expert knowledge of material design, our approach implements a nested-loop proposal-validation workflow to bridge the simulation-to-reality gap and find microstructured composites that are stiff and tough with high sample efficiency. …


Mathematical Model Of Oxygen, Nutrient, And Drug Transport In Tuberculosis Granulomas, Meenal Datta, Mccarthy Kennedy, Saeed Siri, Laura Via, James W. Baish, Lei Xu, Veronique Dartois, Clifton Barry, Rakesh Jain Feb 2024

Mathematical Model Of Oxygen, Nutrient, And Drug Transport In Tuberculosis Granulomas, Meenal Datta, Mccarthy Kennedy, Saeed Siri, Laura Via, James W. Baish, Lei Xu, Veronique Dartois, Clifton Barry, Rakesh Jain

Faculty Journal Articles

Physiological abnormalities in pulmonary granulomas–pathological hallmarks of tuberculosis (TB)–compromise the transport of oxygen, nutrients, and drugs. In prior studies, we demonstrated mathematically and experimentally that hypoxia and necrosis emerge in the granuloma microenvironment (GME) as a direct result of limited oxygen availability. Building on our initial model of avascular oxygen diffusion, here we explore additional aspects of oxy- gen transport, including the roles of granuloma vasculature, transcapillary transport, plasma dilution, and interstitial convection, followed by cellular metabolism. Approximate analytical solutions are provided for oxygen and glucose concentration, interstitial fluid velocity, interstitial fluid pressure, and the thickness of the convective zone. …


Interdependencies Between Wildfire-Induced Alterations In Soil Properties, Near-Surface Processes, And Geohazards, Farshid Vahedifard, Masood Abdollahi, Ben A. Leshchinsky, Timothy D. Stark, Mojtaba Sadegh, Amir Aghakouchak Feb 2024

Interdependencies Between Wildfire-Induced Alterations In Soil Properties, Near-Surface Processes, And Geohazards, Farshid Vahedifard, Masood Abdollahi, Ben A. Leshchinsky, Timothy D. Stark, Mojtaba Sadegh, Amir Aghakouchak

Civil Engineering Faculty Publications and Presentations

The frequency, severity, and spatial extent of destructive wildfires have increased in several regions globally over the past decades. While direct impacts from wildfires are devastating, the hazardous legacy of wildfires affects nearby communities long after the flames have been extinguished. Post-wildfire soil conditions control the persistence, severity, and timing of cascading geohazards in burned landscapes. The interplay and feedback between geohazards and wildfire-induced changes to soil properties, land cover conditions, and near-surface and surface processes are still poorly understood. Here, we synthesize wildfire-induced processes that can affect the critical attributes of burned soils and their conditioning of subsequent geohazards. …


Low Shear In Short-Term Impacts Endothelial Cell Traction And Alignment In Long-Term, Mohanish K. Chandurkar, Nikhil Mittal, Shaina P. Royer-Weeden, Steven D. Lehmann, Yeonwoo Rho, Sangyoon J. Han Feb 2024

Low Shear In Short-Term Impacts Endothelial Cell Traction And Alignment In Long-Term, Mohanish K. Chandurkar, Nikhil Mittal, Shaina P. Royer-Weeden, Steven D. Lehmann, Yeonwoo Rho, Sangyoon J. Han

Michigan Tech Publications

Within the vascular system, endothelial cells (ECs) are exposed to fluid shear stress (FSS), a mechanical force exerted by blood flow that is critical for regulating cellular tension and maintaining vascular homeostasis. The way ECs react to FSS varies significantly; while high, laminar FSS supports vasodilation and suppresses inflammation, low or disturbed FSS can lead to endothelial dysfunction and increase the risk of cardiovascular diseases. Yet, the adaptation of ECs to dynamically varying FSS remains poorly understood. This study focuses on the dynamic responses of ECs to brief periods of low FSS, examining its impact on endothelial traction—a measure of …


In Vitro Assessment Of Protamine Toxicity With Neural Cells, Its Therapeutic Potential To Counter Chondroitin Sulfate Mediated Neuron Inhibition, And Its Effects On Reactive Astrocytes, Derek W. Nelson, Jessica L. Funnell, Conrad H. Cheung, Geraldine B. Quinones, Christina S. Mendoza, Marvin Bentley, Ryan J. Gilbert Feb 2024

In Vitro Assessment Of Protamine Toxicity With Neural Cells, Its Therapeutic Potential To Counter Chondroitin Sulfate Mediated Neuron Inhibition, And Its Effects On Reactive Astrocytes, Derek W. Nelson, Jessica L. Funnell, Conrad H. Cheung, Geraldine B. Quinones, Christina S. Mendoza, Marvin Bentley, Ryan J. Gilbert

Chemical and Biochemical Engineering Faculty Research & Creative Works

Multiple therapies have been studied to ameliorate the neuroinhibitory cues present after traumatic injury to the central nervous system. Two previous in vitro studies have demonstrated the efficacy of the Food and Drug Administration-approved cardiovascular therapeutic, protamine (PRM), to overcome neuroinhibitory cues presented by chondroitin sulfates; however, the effect of a wide range of PRM concentrations on neuronal and glial cells has not been evaluated. In this study, we investigate the therapeutic efficacy of PRM with primary cortical neurons, hippocampal neurons, mixed glial cultures, and astrocytes. The threshold for PRM toxicity is shown to be at or above 10 µg …


Containerization Of Seafarers In The International Shipping Industry: Contemporary Seamanship, Maritime Social Infrastructures, And Mobility Politics Of Global Logistics, Liang Wu Feb 2024

Containerization Of Seafarers In The International Shipping Industry: Contemporary Seamanship, Maritime Social Infrastructures, And Mobility Politics Of Global Logistics, Liang Wu

Dissertations, Theses, and Capstone Projects

This dissertation discusses the mobility politics of container shipping and argues that technological development, political-economic order, and social infrastructure co-produce one another. Containerization, the use of standardized containers to carry cargo across modes of transportation that is said to have revolutionized and globalized international trade since the late 1950s, has served to expand and extend the power of international coalitions of states and corporations to control the movements of commodities (shipments) and labor (seafarers). The advent and development of containerization was driven by a sociotechnical imaginary and international social contract of seamless shipping and cargo flows. In practice, this liberal, …


Rational Design Of Peptide-Based Materials Informed By Multiscale Molecular Dynamics Simulations, Dhwanit Rahul Dave Feb 2024

Rational Design Of Peptide-Based Materials Informed By Multiscale Molecular Dynamics Simulations, Dhwanit Rahul Dave

Dissertations, Theses, and Capstone Projects

The challenge of establishing a sustainable and circular economy for materials in medicine and technology necessitates bioinspired design. Nature's intricate machinery, forged through evolution, relies on a finite set of biomolecular building blocks with through-bond and through-space interactions. Repurposing these molecular building blocks requires a seamless integration of computational modeling, design, and experimental validation. The tools and concepts developed in this thesis pioneer new directions in peptide-materials design, grounded in fundamental principles of physical chemistry. We present a synergistic approach that integrates experimental designs and computational methods, specifically molecular dynamics simulations, to gain in-depth molecular insights crucial for advancing the …


Quaternary Ammonia Compounds In Disinfectant Products: Evaluating The Potential For Promoting Antibiotic Resistance And Disrupting Wastewater Treatment Plant Performance, Zihao Lu, Anna K. Mahony, William A. Arnold, Christopher Marshall, Patrick J. Mcnamara Feb 2024

Quaternary Ammonia Compounds In Disinfectant Products: Evaluating The Potential For Promoting Antibiotic Resistance And Disrupting Wastewater Treatment Plant Performance, Zihao Lu, Anna K. Mahony, William A. Arnold, Christopher Marshall, Patrick J. Mcnamara

Civil and Environmental Engineering Faculty Research and Publications

Quaternary ammonium compounds (QACs) are a class of compounds that were widely used as disinfectants during the COVID-19 pandemic and continue to be used as disinfecting agents. After consumer usage, QAC concentrations are diluted in wastewater as they enter wastewater treatment plants. At sub-inhibitory concentrations, QACs may have unintended repercussions, including increased antibiotic resistance and inhibition of process performance in wastewater treatment plants. This review first summarizes how QACs inhibit bacteria and then highlights the mechanisms by which QACs can promote antibiotic resistance in general. Reported environmental concentrations of QACs are compared to concentrations that are suspected to impact antibiotic …


Life Cycle Assessment Of Hydrothermal Carbonization: A Review Of Product Valorization Pathways, Andrea Ogunleye, Joseph Flora, Nicole Berge Feb 2024

Life Cycle Assessment Of Hydrothermal Carbonization: A Review Of Product Valorization Pathways, Andrea Ogunleye, Joseph Flora, Nicole Berge

Faculty Publications

Hydrothermal carbonization (HTC) has the potential to be a sustainable and environmentally beneficial approach for organic waste treatment. It is likely that HTC product use will dictate the viability of large-scale HTC facilities; therefore, understanding the viability and environmental implications associated with HTC product valorization pathways is critical. The overall goal of this review is to gain an understanding of how HTC product valorization is currently being modeled in life cycle assessment studies, and to use such information to assess current research and/or data needs associated with product valorization. To accomplish this, a review of existing HTC literature was conducted …


Low Shear In Short-Term Impacts Endothelial Cell Traction And Alignment In Long-Term, Mohanish Chandurkar, Nikhil Mittal, Shaina P. Royer-Weeden, Steven D. Lehmann, Yeonwoo Rho, Sangyoon J. Han Feb 2024

Low Shear In Short-Term Impacts Endothelial Cell Traction And Alignment In Long-Term, Mohanish Chandurkar, Nikhil Mittal, Shaina P. Royer-Weeden, Steven D. Lehmann, Yeonwoo Rho, Sangyoon J. Han

Michigan Tech Publications

Within the vascular system, endothelial cells (ECs) are exposed to fluid shear stress (FSS), a mechanical force exerted by blood flow that is critical for regulating cellular tension and maintaining vascular homeostasis. The way ECs react to FSS varies significantly; while high, laminar FSS supports vasodilation and suppresses inflammation, low or disturbed FSS can lead to endothelial dysfunction and increase the risk of cardiovascular diseases. Yet, the adaptation of ECs to dynamically varying FSS remains poorly understood. This study focuses on the dynamic responses of ECs to brief periods of low FSS, examining its impact on endothelial traction-a measure of …


High Temperatures And Low Soil Moisture Synergistically Reduce Switchgrass Yields From Marginal Field Sites And Inhibit Fermentation, Sarvada Chipkar, Kevin Kahmark, Sven Bohm, Mir Zaman Hussain, Leela Joshi, Karleigh M. Krieg, Jacob Aguado, Jasmine Cassidy, Pablo Lozano, Kevin Garland, Andrea Senyk, Derek J. Debrauske, Elizabeth Whelan, Morgan Davies, Paul Urban, G. Philip Robertson, Trey K. Sato, Stephen K. Hamilton, Kurt D. Thelen, Rebecca Ong Feb 2024

High Temperatures And Low Soil Moisture Synergistically Reduce Switchgrass Yields From Marginal Field Sites And Inhibit Fermentation, Sarvada Chipkar, Kevin Kahmark, Sven Bohm, Mir Zaman Hussain, Leela Joshi, Karleigh M. Krieg, Jacob Aguado, Jasmine Cassidy, Pablo Lozano, Kevin Garland, Andrea Senyk, Derek J. Debrauske, Elizabeth Whelan, Morgan Davies, Paul Urban, G. Philip Robertson, Trey K. Sato, Stephen K. Hamilton, Kurt D. Thelen, Rebecca Ong

Michigan Tech Publications

‘Marginal lands’ are low productivity sites abandoned from agriculture for reasons such as low or high soil water content, challenging topography, or nutrient deficiency. To avoid competition with crop production, cellulosic bioenergy crops have been proposed for cultivation on marginal lands, however on these sites they may be more strongly affected by environmental stresses such as low soil water content. In this study we used rainout shelters to induce low soil moisture on marginal lands and determine the effect of soil water stress on switchgrass growth and the subsequent production of bioethanol. Five marginal land sites that span a latitudinal …


Biomolecular Crystals As Functional Materials, Fahmeed Khan Sheehan Feb 2024

Biomolecular Crystals As Functional Materials, Fahmeed Khan Sheehan

Dissertations, Theses, and Capstone Projects

The field of supramolecular chemistry has undergone significant evolution over the last few decades, progressing from fundamental studies of self-assembling systems to the rational design of functional materials with exceptional properties. Among these materials, short peptides have emerged as a chemically simple yet highly versatile class of biomimetic compounds. Initially, short peptides were used as model systems to understand larger protein interactions. As the field progressed, short peptides were found to have exceptional functionality, and are now explored as functional nanomaterials for diverse applications. In many cases, short peptide materials have displayed properties not found in biology, in some cases …


Nanoparticles For Applications In Specific Diagnostics And Precision Medicine, Naxhije Berisha Feb 2024

Nanoparticles For Applications In Specific Diagnostics And Precision Medicine, Naxhije Berisha

Dissertations, Theses, and Capstone Projects

Heterogeneity is common in the expression of cancer and treatment response. Precision medicine enables healthcare providers to tailor medical care to an individual's distinct genetic and environmental makeup. This customization has the potential to result in more efficient treatments while minimizing side effects. We believe that by studying the interface of nanotechnology and cancer medicine we can elucidate innovative solutions that address the challenges of disease heterogeneity. This includes advancements in drug delivery, formulations development, and diagnostic sensing. We highlight three studies that use nanotechnology for applications in precision medicine. In Chapter 2, we highlight design optimization of drug formulations …


Vaccine Immunogenicity Versus Gastrointestinal Microbiome Status: Implications For Poultry Production, Chrysta N. Beck, Jiangchao Zhao, Gisela F. Erf Feb 2024

Vaccine Immunogenicity Versus Gastrointestinal Microbiome Status: Implications For Poultry Production, Chrysta N. Beck, Jiangchao Zhao, Gisela F. Erf

Poultry Science Faculty Publications and Presentations

At the turn of the 21st century, the importance of maintaining a balanced microbiome was brought to the forefront of the microbiology, immunology, and physiology research fields. Exploring the complex interactions between vaccine administration, mucosal microbiome, oral tolerance, and enteric inflammation in health and disease is challenging since environmental factors (such as diet and sanitation) have major influences on gut microbiota composition. High enteric pathogen load has been shown to contribute to dampened cell-mediated and humoral immune responses to vaccines in human case studies, either through elevated enteric inflammation or increased tolerance to environmental microbes. Although antibiotic and probiotic interventions …


Reliable Outdoor Ai-Based Autonomous Uav Localization And Trajectory Tracking Using Cellular Networks, Ghada Afifi Jan 2024

Reliable Outdoor Ai-Based Autonomous Uav Localization And Trajectory Tracking Using Cellular Networks, Ghada Afifi

Theses and Dissertations

Unmanned aerial vehicles (UAVs) are becoming an integral part of numerous commercial and military applications. In many of these applications, the UAV is required to self-navigate in highly dynamic urban environments. Existing localization and trajectory planning techniques, which rely mainly on the Global Positioning System (GPS), do not provide an effective real-time solution for self-localization and path planning, particularly in dense urban environments. The purpose of this thesis is to study the localization and trajectory planning of UAVs independent of GPS systems or other detectable mobile signals. We propose to utilize the broadcast signals from existing cellular networks to localize …


Cardiac Active Tension Modeling Via Genetic Algorithm-Optimized Fractional Order Systems, Afnan Khaled Elhamshari Jan 2024

Cardiac Active Tension Modeling Via Genetic Algorithm-Optimized Fractional Order Systems, Afnan Khaled Elhamshari

Theses and Dissertations

Developing a computational model to model cardiac activity has been increasingly important in recent decades. Accurate cell-level active tension modeling for cardiomyocytes is critical to understanding cardiac functionality on a patient-specific basis and developing an effective in-silico cardiac model. However, cell-level models in the literature fail to account for viscoelasticity and inter-patient variations in active tension. This research proposes a genetic algorithm-optimized, fractional order system to model cell-level active tension by extending Land’s state-of-the-art model of cardiac contraction. The model features the (left) Caputo derivative of six state variables that identify the mechanistic origins of viscoelasticity in a myocardial cell …


Miniaturized Fluorescence Ph Sensor With Assembly Free Ball Lens On A Tapered Multimode Optical Fiber, Bohong Zhang, Farhan Mumtaz, Muhammad Roman, Dinesh Reddy Alla, Rex E. Gerald, Jie Huang Jan 2024

Miniaturized Fluorescence Ph Sensor With Assembly Free Ball Lens On A Tapered Multimode Optical Fiber, Bohong Zhang, Farhan Mumtaz, Muhammad Roman, Dinesh Reddy Alla, Rex E. Gerald, Jie Huang

Electrical and Computer Engineering Faculty Research & Creative Works

In biochemistry, the absence of a compact, assembly-free pH sensor with high sensitivity and signal-to-noise ratio has been a persistent hurdle in achieving accurate pH measurements in real time, particularly in complex liquid environments. This manuscript introduces what we believe to be a novel solution in the form of a miniaturized pH sensor utilizing an assembly-free ball lens on a tapered multimode optical fiber (TMMF), offering the potential to revolutionize pH sensing in biochemical applications. A multimode optical fiber (MMF) was subjected to tapering processes, leading to the creation of an ultra-thin needle-like structure with a cross-sectional diameter of about …


High Crystalline Quality Homoepitaxial Si-Doped Β-Ga2O3(010) Layers With Reduced Structural Anisotropy Grown By Hot-Wall Mocvd, D. Gogova, D. Q. Tran, V. Jokubavicius, L. Vines, M. Schubert, R. Yakimova, P. P. Paskov, V. Darakchieva Jan 2024

High Crystalline Quality Homoepitaxial Si-Doped Β-Ga2O3(010) Layers With Reduced Structural Anisotropy Grown By Hot-Wall Mocvd, D. Gogova, D. Q. Tran, V. Jokubavicius, L. Vines, M. Schubert, R. Yakimova, P. P. Paskov, V. Darakchieva

Department of Electrical and Computer Engineering: Faculty Publications

A new growth approach, based on the hot-wall metalorganic chemical vapor deposition concept, is developed for high-quality homoepitaxial growth of Si-doped single-crystalline β-Ga2O3 layers on (010)-oriented native substrates. Substrate annealing in argon atmosphere for 1 min at temperatures below 600 oC is proposed for the formation of epi-ready surfaces as a cost-effective alternative to the traditionally employed annealing process in oxygen-containing atmosphere with a time duration of 1 h at about 1000 oC. It is shown that the on-axis rocking curve widths exhibit anisotropic dependence on the azimuth angle with minima for in-plane direction …


Virtual Test Beds For Image-Based Control Simulations Using Blender, Akkarakaran Francis Leonard, Govanni Gjonaj, Minhazur Rahman, Helen E. Durand Jan 2024

Virtual Test Beds For Image-Based Control Simulations Using Blender, Akkarakaran Francis Leonard, Govanni Gjonaj, Minhazur Rahman, Helen E. Durand

Chemical Engineering and Materials Science Faculty Research Publications

Process systems engineering research often utilizes virtual testbeds consisting of physics- based process models. As machine learning and image processing become more relevant sensing frameworks for control, it becomes important to address how process systems engineers can research the development of control and analysis frameworks that utilize images of physical processes. One method for achieving this is to develop experimental systems; another is to use software that integrates the visualization of systems, as well as modeling of the physics, such as three-dimensional graphics software. The prior work in our group analyzed image-based control for the small-scale example of level in …


Aerodynamic Investigation Of Naca 0020 Airfoil With Extended And Serrated Trailing Edge At Various Turbulent Intensities, Livya E Jan 2024

Aerodynamic Investigation Of Naca 0020 Airfoil With Extended And Serrated Trailing Edge At Various Turbulent Intensities, Livya E

Theses and Dissertations

Lift (upward force) is a significant aerodynamic component that directly relates to the aerodynamic efficiency (lift-to-drag ratio) of the airfoil. Enhancement of airfoil lift is important for industries like wind turbines, aircraft, and turbo machinery. The present study investigates the NACA series airfoil by modifying the trailing edge in the form of extension and serration. The angle of attack was changed from 0° to 35° instep of 5°, and the airflow Reynolds number was fixed as 2.14 × 105. To figure out the flow behavior, surface pressure has been collected from the 50 pressure ports provided over the airfoil surface. …


Accelerating Elastic Property Prediction In Fe-C Alloys Through Coupling Of Molecular Dynamics And Machine Learning, Sandesh Risal, Navdeep Singh, Yan Yao, Li Sun, Samprash Risal, Weihang Zhu Jan 2024

Accelerating Elastic Property Prediction In Fe-C Alloys Through Coupling Of Molecular Dynamics And Machine Learning, Sandesh Risal, Navdeep Singh, Yan Yao, Li Sun, Samprash Risal, Weihang Zhu

Pacific Faculty Work

The scarcity of high-quality data presents a major challenge to the prediction of material properties using machine learning (ML) models. Obtaining material property data from experiments is economically cost-prohibitive, if not impossible. In this work, we address this challenge by generating an extensive material property dataset comprising thousands of data points pertaining to the elastic properties of Fe-C alloys. The data were generated using molecular dynamic (MD) calculations utilizing reference-free Modified embedded atom method (RF-MEAM) interatomic potential. This potential was developed by fitting atomic structure-dependent energies, forces, and stress tensors evaluated at ground state and finite temperatures using ab-initio. Various …


Investigation Of Machine Learning Driven Adaptive Control Strategy For Heat Exchanger Under Varying Fouling Conditions, Reshma Madhu Pk Jan 2024

Investigation Of Machine Learning Driven Adaptive Control Strategy For Heat Exchanger Under Varying Fouling Conditions, Reshma Madhu Pk

Theses and Dissertations

Fouling is an undesirable and inevitable phenomenon that affects Heat Exchanger (HE) dynamics, increases maintenance cost (>50%), and loss of production. Conventional fouling prediction and control techniques demand an in-depth understanding of the HE-specific fouling dynamics. Hence, machine learning emerges as an ideal tool for learning the fouling process from the available measurement dataset.

The proposed work aims to design a machine learning-driven adaptive control technique for an industrial HE, subjected to varying fouling conditions. Naphtha cooler, an industrial HE utilized in petroleum refineries, employs cooling water to lower Naphtha temperature, but the high impurities in the recycled cooling …


Surface Modification Of Poly(4,4'-Oxydiphenilene Pyromellitimide) With Low-Pressure Plasma Treatment, Cihan Aktas Jan 2024

Surface Modification Of Poly(4,4'-Oxydiphenilene Pyromellitimide) With Low-Pressure Plasma Treatment, Cihan Aktas

USF Tampa Graduate Theses and Dissertations

This study explores the change of the wetting characteristics of commercially availablepolyimide (PI), Kapton® HN, films a type of poly(4,4′-oxydiphenylene-pyromellitimide), following treatment with low-pressure plasmas of carbon tetrafluoride (CF4), air, hydrogen (H2), carbon-dioxide (CO2) and oxygen (O2) gases as well as the surface texturing via laser-exposure procedure. The water contact angle (CA) and surface free energy (SFE) of untreated PI films were determined as 82.4°±0.8 and 45.0±0.3 mN/m, respectively. After CF4 plasma gas treatment, the CA value of PI films increased to 110.2°±1.0, while it decreased to 9.3°±2.3 after O2 plasma gas treatment. The surface free energy (SFE) of PI …