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Impact Of Insulin Resistance On Behavioral And Neurochemical Deficits In Db/Db Mice, Ajaykumar Narayan Sharma

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There is a high comorbidity of type-2 diabetes and neuropsychiatric disorders. However, there is paucity of preclinical research to study this phenomenon. The validity of the db/db mouse as an animal model to study type-2 diabetes and related macrovascular and microvascular complications is well established. The first part of this dissertation was designed to investigate comprehensively the db/db mouse behavior as preclinical evidence of type-2 diabetes related major neurobehavioral complications. Juvenile (5-6 weeks) and adult (10-11 weeks) db/db mice were screened for behavioral depression in forced swim test (FST), psychosis-like symptoms using pre-pulse inhibition (PPI) test, anxiety behavior employing elevated …

3-D Model Characterization And Identification From Intrinsic Landmarks, John L. Camp

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A method to automatically characterize and identify 3-D range scans based on intrinsic landmarks is presented. Intrinsic landmarks represent locally unique, intrinsic properties of a scanned surface, regardless of scale or rotation. The number, location, and characteristics of landmarks are used to characterize the scanned models. This method contains a selection process to identify stable, intrinsic landmarks for range scans as well as the identification of those scans. The selection process requires no user interaction or surface assumptions. It uses the principal curvatures at the range points to select the landmarks. First, a large number of landmarks are generated by …

The Functionalization And Characterization Of Adherent Carbon Nanotubes With Silver Nanoparticles For Biological Applications, Adam A. Maleszewski

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The purpose of this project is to form silver nanoparticles (Ag-NP) attached to a hierarchical substrate for possible use in biological applications. The effectiveness of these Ag-NP-containing devices, including biofilters and biosensors, may be dramatically enhanced by the use of hierarchical structures such as carbon nanotubes (CNT), as they offer a high surface area surface suitable for cell-device interactions, while Ag-NP would be a suitable component in many such devices due to its plasmonic surface properties (e.g. in sensor and directed energy applications) and its anti-microbial properties (desirable for fluid filtration due to its low weight. Meaningful control over the …

Gaze Estimation Using Sclera And Iris Extraction, Prashanth Rao Periketi

University of Kentucky Master's Theses

Tracking gaze of an individual provides important information in understanding the behavior of that person. Gaze tracking has been widely used in a variety of applications from tracking consumers gaze fixation on advertisements, controlling human-computer devices, to understanding behaviors of patients with various types of visual and/or neurological disorders such as autism. Gaze pattern can be identified using different methods but most of them require the use of specialized equipments which can be prohibitively expensive for some applications. In this dissertation, we investigate the possibility of using sclera and iris regions captured in a webcam sequence to estimate gaze pattern. …

Reprogrammed Transcriptome In Rhesus-Bovine Interspecies Somatic Cell Nuclear Transfer Embryos, Kai Wang, Hasan H. Otu, Ying Chen, Young Lee, Keith Latham, Jose B. Cibelli

Department of Electrical and Computer Engineering: Faculty Publications

Background: Global activation of the embryonic genome (EGA), one of the most critical steps in early mammalian embryo development, is recognized as the time when interspecies somatic cell nuclear transfer (iSCNT) embryos fail to thrive.

Methodology/Principal Findings: In this study, we analyzed the EGA-related transcriptome of rhesus-bovine iSCNT 8- to 16- cell embryos and dissected the reprogramming process in terms of embryonic gene activation, somatic gene silencing, and maternal RNA degradation. Compared with fibroblast donor cells, two thousand and seven genes were activated in iSCNT embryos, one quarter of them reaching expression levels comparable to those found in in vitro …

Self-Encoded Spread Spectrum For Multirate Multimedia Communication In Multipath Channel, Liang Chi, Won Mee Jang, Lim Nguyen

Department of Electrical and Computer Engineering: Faculty Publications (to 2015)

In this paper, we propose the self-encoded spread spectrum (SESS) with multirate multimedia communication in multipath channel. In multirate multimedia SESS system, each application has their own transmission bit rate. The signal is transmitted through multipath channels each with different channel gain and time delay. We view the main path as the signal resource and other paths as interference. At the receiver side, decorrelation scheme is employed for the main path combined signal not only to reduce the crosstalk between different applications, but also to provide a better estimation for the despreading sequence in the main path. Interference cancellation(IC) in …

Comparative Analysis Of The Biaxial Mechanical Behavior Of Carotid Wall Tissue And Biological And Synthetic Materials Used For Carotid Patch Angioplasty, Alexey Kamenskiy, Iraklis I. Pipinos, Jason N. Mactaggart, Syed A. Jaffar Kazmi, Yuris A. Dzenis

Department of Mechanical and Materials Engineering: Faculty Publications

Patch angioplasty is the most common technique used for the performance of carotid endarterectomy. A large number of patching materials are available for use while new materials are being continuously developed. Surprisingly little is known about the mechanical properties of these materials and how these properties compare with those of the carotid artery wall. Mismatch of the mechanical properties can produce mechanical and hemodynamic effects that may compromise the long-term patency of the endarterectomized arterial segment. The aim of this paper was to systematically evaluate and compare the biaxial mechanical behavior of the most commonly used patching materials. We compared …

Comparison Of Subsurface And Surface Runoff Phosphorus Transport Rates In Alluvial Floodplains, Aaron R. Mittelstet, Derek M. Heeren, Garey A. Fox, Daniel E. Storm, Michael J. White, Ronald B. Miller

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Phosphorus (P) loading to streams can occur by both surface runoff and subsurface transport, with subsurface P transport often assumed negligible. Groundwater P concentrations in alluvial aquifers can be significant, especially in preferential flow paths (PFPs). The objectives of this research were to quantify subsurface P transport rates at two sites in northeastern Oklahoma and to compare them with surface runoff P transport rates derived from a hydrologic model, the Pasture Phosphorus Management Calculator (PPM Plus). Ozark ecoregion study sites were adjacent to the Barren Fork Creek and Honey Creek in northeastern OK, USA. Each site, instrumented with 24 observation …

In Vivo Magnetic Resonance Elastography Of Mesenchymally Derived Constructs, Shadi F. Othman, Evan T. Curtis, Huihui Xu

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The multidisciplinary field of tissue engineering (TE) aims to create biological substitutes to restore, maintain, or enhance the function of tissue or whole organs, in which the mechanical properties of replacements are critical to their structure and function. Several techniques have been investigated for measuring the mechanical properties of developing tissues and organs; however, current methods are destructive. The goal of this work is to apply high resolution Magnetic Resonance Elastography (μMRE) technique with 100 μm in-plane resolution to address a critical problem in TE: nondestructive monitoring and characterization of growing mesenchymal stem cells (MSCs)-based tissue engineered constructs. In this …

Biological Approaches For Addressing The Grand Challenge Of Providing Access To Clean Drinking Water, Mark R. Riley, Charles P. Gerba, Menachem Elimelech

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The U.S. National Academy of Engineering (NAE) recently published a document presenting “Grand Challenges for Engineering”. This list was proposed by leading engineers and scientists from around the world at the request of the U.S. National Science Foundation (NSF). Fourteen topics were selected for these grand challenges, and at least seven can be addressed using the tools and methods of biological engineering. Here we describe how biological engineers can address the challenge of providing access to clean drinking water. This issue must be addressed in part by removing or inactivating microbial and chemical contaminants in order to properly deliver water …

Development Of An Angular Scanning System For Sensing Vertical Profiles Of Soil Electrical Conductivity, Viacheslav Adamchuk, Ahmad S. Mat Su, Roger A. Eigenberg, Richard B. Ferguson

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Apparent soil electrical conductivity (EC_a) is typically mapped to define soil spatial variability within an agricultural field. Knowledge of the vertical variability of EC_a is desired to define the site‐specific behavior of the soil profile. A pneumatic angular scanning system (PASS) was developed to sense horizontal and vertical changes of EC_a on‐the‐go with an electromagnetic induction (EMI) instrument using an angular scanning method. This sensor system consists of a sled with a rotating mechanism, an EMI sensor, an inclinometer, and a pneumatic actuator. The system was evaluated at the University of Nebraska‐Lincoln Agricultural Research and Development …

Glypican-3 Targeting Of Liver Cancer Cells Using Multifunctional Nanoparticles, James O. Park, Zachary Stephen, Conory Sun, Omid Veiseh, Forrest M. Kievit, Chen Fang, Matthew Leung, Hyejung Mok, Miqin Zhang

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Imaging is essential in accurately detecting, staging, and treating primary liver cancer (hepatocellular carcinoma [HCC]), one of the most prevalent and lethal malignancies. We developed a novel multifunctional nanoparticle (NP) specifically targeting glypican-3 (GPC3), a proteoglycan implicated in promotion of cell growth that is overexpressed in most HCCs. Quantitative real-time polymerase chain reaction was performed to confirm the differential GPC3 expression in two human HCC cells, Hep G2 (high) and HLF (negligible). These cells were treated with biotin-conjugated GPC3 monoclonal antibody (aGPC3) and subsequently targeted using superparamagnetic iron oxide NPs conjugated to streptavidin and Alexa Fluor 647. Flow cytometry demonstrated …

Energy And Climate Implications For Agricultural Nutrient Use Efficiency, Adam J. Liska, Richard K. Perrin

Adam Liska Papers

Energy and climate change are beginning to dominate the global political agenda and will drive policy formation that will shape the future of agriculture. Energy issues threaten national security and economic stability, as well as access to low-cost nutrient inputs for agriculture. Climate change has the potential to cause serious disruption to agricultural productivity. Paradoxically, nutrient use in agriculture to increase crop yields has the potential to negatively impact climate. This chapter will discuss recent and future energy and climate trends, the relationships between agricultural nutrient use efficiency and biofuels, and how global land limitations will shape agriculture in the …

Effect Of Distillers Grains Moisture And Inclusion Level In Livestock Diets On Greenhouse Gas Emissions In The Corn-Ethanol-Livestock Life Cycle, Virgil R. Bremer, Andrea K. Watson, Adam J. Liska, Galen Erickson, Kenneth Cassman, Kathryn J. Hanford, Terry Klopfenstein

Adam Liska Papers

A model was previously developed (Biofuel Energy Systems Simulator; www. bess.unl.edu) to predict greenhouse gas (GHG) emissions and net energy yield when ethanol is produced from corn. The model also predicts feedlot cattle, dairy cattle, and swine performance and feed replacement value of ethanol coproducts. Updated equations that predict performance of feedlot cattle fed 0 to 40% of dietary DM as corn wet (WDGS), modified (MDGS), or dry (DDGS) distillers grains plus solubles replacing dry-rolled and high-moisture corn were developed and incorporated into the model. Equations were derived from pen-level performance for 20 finishing studies evaluating WDGS, 4 evaluating MDGS, …

Fus Transgenic Rats Develop The Phenotypes Of Amyotrophic Lateral Sclerosis And Frontotemporal Lobar Degeneration, Cao Huang, Hongxia Zhou, Jianbin Tong, Han Chen, Yong-Jian Liu, Dian Wang, Xiaotao Wei, Xugang Xia

Nebraska Center for Biotechnology: Faculty and Staff Publications

Fused in Sarcoma (FUS) proteinopathy is a feature of frontotemporal lobar dementia (FTLD), and mutation of the fus gene segregates with FTLD and amyotrophic lateral sclerosis (ALS). To study the consequences of mutation in the fus gene, we created transgenic rats expressing the human fus gene with or without mutation. Overexpression of a mutant (R521C substitution), but not normal, human FUS induced progressive paralysis resembling ALS. Mutant FUS transgenic rats developed progressive paralysis secondary to degeneration of motor axons and displayed a substantial loss of neurons in the cortex and hippocampus. This neuronal loss was accompanied by ubiquitin aggregation and …

Comparative Manufacture And Cell-Based Delivery Of Antiretroviral Nanoformulations, Shantanu Balkundi, Ari S. Nowacek, Ram S. Veerubhotla, Han Chen, Andrea Martinez-Skinner, Upal Roy, R. Lee Mosley, Georgette Kanmogne, Xinming Liu, Alexander V. Kabanov, Tatiana Bronich, Joellyn Mcmillan, Howard E. Gendelman

Nebraska Center for Biotechnology: Faculty and Staff Publications

Nanoformulations of crystalline indinavir, ritonavir, atazanavir, and efavirenz were manufactured by wet milling, homogenization or sonication with a variety of excipients. The chemical, biological, immune, virological, and toxicological properties of these formulations were compared using an established monocyte-derived macrophage scoring indicator system. Measurements of drug uptake, retention, release, and antiretroviral activity demonstrated differences amongst preparation methods. Interestingly, for drug cell targeting and antiretroviral responses the most significant difference among the particles was the drug itself. We posit that the choice of drug and formulation composition may ultimately affect clinical utility.

Detection And Quantification Of Poliovirus Infection Using Ftir Spectroscopy And Cell Culture, Felipe T. Lee-Montiel, Kelly A. Reynolds, Mark R. Riley

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Background: In a globalized word, prevention of infectious diseases is a major challenge. Rapid detection of viable virus particles in water and other environmental samples is essential to public health risk assessment, homeland security and environmental protection. Current virus detection methods, especially assessing viral infectivity, are complex and time-consuming, making point-of-care detection a challenge. Faster, more sensitive, highly specific methods are needed to quantify potentially hazardous viral pathogens and to determine if suspected materials contain viable viral particles. Fourier transform infrared (FTIR) spectroscopy combined with cellular-based sensing, may offer a precise way to detect specific viruses. This approach utilizes infrared …

Bone Tissue Quality Determination Of Mice Through A Novel Reference Point Indentation Technique, Matin Lendhey

Dissertations and Theses

"Bone strength deteriorates with age; which increases the susceptibility to fracture. Current clinical techniques for the estimation of bone strength are largely Bone Mineral Density (BMD) based. However, toughness, which is the ability to resist crack growth, plays a critical role in bones‟ fracture resistance. Traditionally, toughness measurements involve large samples, obviating their use clinically. Recent data suggest that a reference point indentation approach provides a novel, localized measure of toughness from whole bones. In the current research, we evaluated the sensitivity of this method to discriminate small known differences in fracture toughness that exist between inbred mouse strains with …

Development Of An Approach To Increase Drug Uptake To Bone Tumors Using Non-Invasive Mechanical Loading, Paolo E. Palacio

Dissertations and Theses

This thesis develops an approach to enhance drug delivery to bone tumors by implementing a non-invasive mechanical loading technique. An imaging protocol that characterizes the load-enhanced drug uptake is also presented. The long-term goal of this work is to develop a clinical protocol that enhances the delivery of therapeutic agents to bone tumors by utilizing load-bearing activity. This easy-to-implement approach could help increase drug uptake into the tumor interstitial fluid space as well as into tumor cells, thereby enhancing a drug's clinical effect while decreasing systemic drug dosage and unwanted side effects. This thesis details the process used to grow …

Effects Of Estrogen Loss On The Vascular Porosity In Rat Cortical Bone, Jessica D Levy

Dissertations and Theses

"Osteoporosis is a skeletal disease that currently affects 10 million Americans, and is characterized by low bone mass and increased skeletal fragility (National Osteoporosis Foundation, 2011). Estrogen loss, which begins during menopause, is the leading cause of osteoporosis in women. Recent research has focused on changes in cortical bone microporosity due to estrogen loss, which is important for bone health; load-induced interstitial fluid flow within the lacunar-canalicular porosity surrounding osteocytes is thought to play an important role in bone maintenance, while the vascular porosity provides a pressure relaxation mechanism for the fluid flow in the lacunar-canalicular porosity. Recent high-resolution micro-CT …

Transport Of Antibodies And Nanoparticles Across An In Vitro Blood-Brain Barrier, Lin Zhang

Dissertations and Theses

"The blood-brain barrier (BBB) is a dynamic interface between the blood circulation and the central nervous system (CNS). While it serves as a selective barrier to water and solutes to prevent the blood-borne toxins from entering into the brain tissue, it hinders the drug delivery to the CNS for the treatment of brain diseases. Recently therapeutic antibodies and a variety of drug-loaded nanoparticles (NPs) have been widely used to treat CNS disorders such as brain tumors, Alzheimer's disease and Parkinson's disease. To improve brain delivery efficacy of antibodies and NPs, it is necessary to quantify their transport parameters across the …

Evaluation Of A Novel Self-Assembled Nanocoating In Promoting Bone On-Growth And Apposition On Metal, Hani Ghazi

Dissertations and Theses

"Loosening of metal is the leading cause of clinical failures of orthopedic surgeries. A novel coating of self-assembled monolayer of phosphonate molecules (SAMP) that chemically enhances metallic surfaces by covalently bonding to their naturally occurring oxidized surfaces has been developed.1 The SAMP coating is chemically stable, and its in-vitro results showed that it promotes cell proliferation, osteoblast adhesion and enhances biological attachment to metal surfaces.1 The purpose of this study is to establish the efficacy of this novel chemical surface treatment in improving the fixation of metallic implants in both cortical and cancellous bone over a conventional untreated implant. We …

Modeling Incident And Emergency Management From A Regional Perspective, Ozge Cavusoglu

All ETDs from UAB

Traffic incidents and natural or man-made disasters can impose significant safety risks and disruptions on traffic flows, often resulting in non-recurring congestion. Congestion, in turn, may impede the ability of EMS (Emergency Medical Services) to provide timely response to those in need of medical attention. Thus, it is important to understand the potential impacts of incidents and emergencies on traffic network operations and develop response strategies with a potential of minimizing such impacts on traffic operations, emergency response and the safety of the traveling public. The objective of the dissertation was twofold: a. Study incident management options and benefits from …

Ionic Mechanism Of Post-Shock Arrhythmias: Role Of Intracellular Calcium, Brittany Sowell

All ETDs from UAB

Background: Defibrillation shocks are commonly used to interrupt life-threatening cardiac arrhythmias, but these strong electrical shocks may cause post-shock arrhythmias, the ionic mechanism of which is not well known. Strong shocks cause electroporation and diastolic Cai2+ increase, which may possibly lead to focal arrhythmias via spontaneous Cai2+ rise (SCR), activation of inward Na+-Ca2+ exchange current (INCX), and rise in membrane potential (Vm). The objective of this study was to examine the role of intracellular calcium and the Cai2+-dependent ionic mechanism in post-shock arrhythmias. Methods: Experiments were performed in patterned cultures of neonatal rat myocytes. Fluorescent dyes and two 16x16 photodiode …

Parallel Confocal Recording Of Localized Retinal Photoreceptor Responses, Qiuxiang Zhang

All ETDs from UAB

The primary purpose of my thesis research is to validate parallel confocal recording of intrinsic optical signals (IOSs) correlated with localized retinal photoreceptor responses. IOS imaging promises a noninvasive method for retinal disease detection and treatment evaluation. However, IOS identification of localized retinal dysfunction is still challenging due to the complexity of retinal structure. Stimulus-evoked IOSs have been observed in both photoreceptors and inner retinal neurons. IOS pattern of retinal photoreceptor layer may contain cross-talk noise from inner retinal layers. In order to detect localized retinal photoreceptors response without significant contamination from other retinal volumes, we designed a rapid functional …

Characterization Of The Nonlinear Refractive Index Of Carbon Disulfide Over An Extended Spectral And Temporal Range, Marcus Seidel

Electronic Theses and Dissertations

The intensity dependent refractive index change of a medium is frequently described in terms of the product n₂ · I where n₂ is the nonlinear refractive index and I the light intensity. The nonlinear refractive index is often treated as constant which is a reasonable assumption if the light interacts only with bound electrons. In the case of carbon disulfide (CS₂) however, nuclear motions contribute to n₂. These motions occur on the sub picosecond time scale and thus become especially relevant for ultrashort laser pulses. The neat liquid CS₂ is studied because it exhibits a large nonlinear refractive index in …

Towards Calibration Of Optical Flow Of Crowd Videos Using Observed Trajectories, Iman K. Elbadramany

Electronic Theses and Dissertations

The need exists for finding a quantitative method for validating crowd simulations. One approach is to use optical flow of videos of real crowds to obtain velocities that can be used for comparison to simulations. Optical flow, in turn, needs to be calibrated to be useful. It is essential to show that optical flow velocities obtained from crowd videos can be mapped into the spatially averaged velocities of the observed trajectories of crowd members, and to quantify the extent of the correlation of the results. This research investigates methods to uncover the best conditions for a good correlation between optical …

Estimation Of Dariy Particulate Matter Emission Rates By Lidar And Inverse Modeling, C. C. Marchant, Kori D. Moore, Michael D. Wojcik, Randy S. Martin, R L. Pfeiffer, K H. Prueger, J L. Hatfield

Civil and Environmental Engineering Faculty Publications

Particulate matter (PM) emissions from agricultural operations are an important issue for air quality and human health and a topic of interest to government regulators. PM emission rates from a dairy in the San Joaquin Valley of California were investigated during June 2008. The facility had 1,885 total animals, including 950 milking cows housed in free-stall pens with an open-lot exercise area, and 935 dry cows, steers, bulls, and heifers housed in open lots. Point sensors, including filter-based aerodynamic mass samplers and optical particle counters (OPC), were deployed at select points around the facility to measure optical and aerodynamic particulate …

Incorporating Environmental Engineering And Science Topics Into Elementary Education , Jessica G. Billings

Dissertations, Master's Theses and Master's Reports - Open

No abstract provided.

Imitation Of Basic Hand Preshapes By Fluid Based Method: Fluidics Formation Control, Umut Ti̇lki̇, İsmet Erkmen, Aydan Müşerref Erkmen

Turkish Journal of Electrical Engineering and Computer Sciences

In this paper, a new approach is developed, avoiding the correspondence problem caused by the difference in embodiment between imitator and demonstrator in imitation learning. In our work, the imitator is a fluidic system of dynamics totally different than the imitatee, which is a human performing hand gestures. The fluidic system is composed of fluid particles, which are used for the discretization of the problem domain. In this work, we demonstrate the fluidics formation control so as to imitate by observation basic hand preshaping features. Our fluidic formation control is based on setting suitable parameters of Smoothed Particle Hydrodynamics (SPH), …