Digital Commons Network^™

Why The Recognition Of Sentience Is So Important For Animal Welfare, Mark Jones

Animal Sentience

Rowan et al. (2022) provide a useful summary of the history and development of the philosophical, public, and legal recognition of animal sentience and its importance in improving the welfare of animals. Here I argue for the incorporation of the precautionary principle in sentience recognition, and the wider significance of sentience recognition to the current climate, biodiversity and human health crises.

Wild Animal Welfare, Clare Palmer, Peter Sandøe

Animal Sentience

Rowan et al’s article provides an overview of developments in the science of animal sentience and its links to animal welfare policy, especially regarding farm animals. But changing ideas of animal sentience and welfare are also important for managing wild and other free-living animals. We ask how the welfare of these animals differs from that of farmed animals, especially how the ability to make autonomous choices may matter. We suggest that more research into wild animal welfare is needed to make informed policy decisions, for example, about using animals in rewilding projects and choosing between policies of culling and fertility …

Effects Of Sex And Reproductive Condition On Behavior Of Southern Red-Backed Salamanders: Activity, Agonistic Behavior And Escape Velocity, Megan N. Mosier

Graduate Theses/Dissertations

Producing and carrying eggs is energetically costly and therefore can affect behavior. Female Southern Red-backed Salamanders (Plethodon serratus) in the Ozarks reproduce biennially, and so during the reproductive season some females are gravid and some are non-gravid. In this study, we compared the exploratory and aggressive behaviors of gravid females, non-gravid females, and males, as well as the escape velocities of each sex class. In exploratory trials, sex did not affect distance travelled, but gravid females and males showed shorter latencies to move than non-gravid females during the winter. During the aggression trials, individuals were subjected to a …

Evaluating Exploitation Of White Crappie And Black Crappie In Three Southeast Kansas Reservoirs, Danci Lee Johnston

Graduate Theses/Dissertations

Populations of white crappie Pomoxis annularis and black crappie P. nigromaculatus were studied in three southeast Kansas reservoirs to assess exploitation and determine if current regulations were conducive for sustainable populations. Trap nets were used to sample crappie in Elk City Reservoir, Big Hill Reservoir, and Parsons City Lake. Crappie with length 210 mm and greater were tagged with FloyFD-94 tags that served as entries into a drawing for a US$300-valued reward to encourage tag reporting. Harvest and angler demographic information were collected when tags were reported. Postcard surveys and motion-sensed cameras were used in conjunction to estimate angler effort …

Maternal Drivers Of Reproductive Output In The Lizard Family Scincidae: A Phylogenetic Comparative Approach, William Zang

West Chester University Master’s Theses

Scincidae is one of the most diverse families of squamates, comprising over 1,300 species of lizards with a variety of life history and ecological traits. This diversity includes three reproductive modes, where some species reproduce via oviparity (egg-laying), viviparity (live birth) or use of a mixed strategy (females switch modes). In this study, it was sought whether reproductive output differs between scincid species using these reproductive modes. Reproductive output is defined as the average product of offspring abundance and size per reproductive event, representing the reproductive effort of an individual. Additionally, the importance of phylogeny (evolutionary relatedness) and a suite …

Foot Injuries In Michigan, Usa, Gray Wolves (Canis Lupus), 1992–2014, Daniel J. O'Brien, Dean E. Beyer Jr., Erin Largent, Julie R. Melotti, Caitlin N. Ott-Conn, Donald H. Lonsway, Thomas M. Cooley, Robert Atkinson, Michelle Clayson, Kelly A. Straka

United States Department of Agriculture Wildlife Services: Staff Publications

The range of gray wolves (Canis lupus) in the contiguous US is expanding. Research and monitoring to support population recovery and management often involves capture via foothold traps. A population-level epidemiologic assessment of the effect of trap injuries on wolf survival remains needed to inform management. We describe the baseline rate, type, and severity of foot injuries of wolves born 1992–2013 in Michigan’s Upper Peninsula, evaluate the reliability of field-scoring trap-related injuries, and the effect of injuries on wolf survival. We assessed foot injuries by physical and radiographic exam at postmortem and/or time of capture for 351 wolves using the …

Olfactory Lures In Predator Control Do Not Increase Predation Risk To Birds In Areas Of Conservation Concern, Page Klug, Amy A. Yackel Adams, Robert N. Reed

United States Department of Agriculture Wildlife Services: Staff Publications

Context. Lethal control of predators is often undertaken to protect species of conservation concern. Traps are frequently baited to increase capture efficacy, but baited traps can potentially increase predation risk by attracting predators to protected areas. This is especially important if targeted predators can escape capture due to low trap success. Snake traps using live mouse lures may be beneficial if traps effectively remove snakes in the presence of birds and do not attract additional snakes to the area.

Aims. The present study evaluated whether mouse-lure traps in areas occupied by birds (simulated by deploying birdlure traps) could influence predation …

Wild Pig Removal Reduces Pathogenic Bacteria In Low-Order Streams, Sara A. Bolds, B. Graeme Lockaby, Latif Kalin, Stephen S. Ditchkoff, Mark D. Smith, Kurt Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pig populations have undergone enormous increases in the United States and particularly across the southern U.S. in recent years. High fecundity rates and abilities to adapt quickly to varied habitats have enabled pig populations to become entrenched and difficult to eliminate. The pigs cause many negative impacts on ecosystems including degradation of water quality through infusion of fecal contamination and other non-point source pollutants. Our goal was to determine the effects of pig removal on water quality in streams that were known to be significantly polluted by pig activity Bolds (J Environ Qual 50: 441–453, 2021). We compared …

Table Of Contents, Taxonomic Report Of The International Lepidoptera Survey, October 1, 1998–December 20, 2022, International Lepidoptera Survey

The Taxonomic Report of the International Lepidoptera Survey

Table of contents for all issues of the Taxonomic Report of the International Lepidoptera Survey from October 1, 1998 (volume 1, issue 1) through December 20, 2022 (volume 10, issue 10).

Review Of Spiders Of North America, By Sarah Rose, Michael L. Draney

The Prairie Naturalist

A field guide to spiders, the dominant terrestrial predator group, has long been a desire for North American naturalists, biologists, and spider fans, but not surprisingly, the first “real” field guide has been a long time coming. The diversity of spiders, with over 50,000 known species globally (World Spider Catalog 2022) and around 4,000 in North America north of Mexico (Rose 2022), is well beyond the diversity of more traditional field guide targets such as birds (about 1,000 species north of Mexico; American Birding Association 2022) or butterflies (about 725 species north of Mexico; North American Butterfly Association 2022). Also, …

Review Of Methods For Ecological Research On Terrestrial Small Mammals, By Robert Mccleery, Lynda R. Lafond

The Prairie Naturalist

Small mammals are used in ecological studies throughout the world, yet the subject has lacked a clear reference that included upto- date methods pertaining to passive detection, molecular, and statistical approaches. In Methods for Ecological Research on Terrestrial Small Mammals, McCleery and his coauthors build on previous research references (Braun 2005, Sutherland 2006, Krebs 2014, Silvy 2020) and present methodologies specific to the study of small mammals that are applicable globally. Written as an asset for novice and experienced small mammal researchers alike, Methods for Ecological Research on Terrestrial Small Mammals is organized in a logical format, providing readers …

Second Twenty-Five Year Index: Volumes 26–50, 1994–2018, Jane E. Austin

The Prairie Naturalist

The first 50 years of the Prairie Naturalist reside on the shelves of libraries and personal collections. The articles and notes published over those years provide invaluable knowledge about Great Plains biota, communities, conservation, and landscape ecologies. Awareness of the wealth of information in those 50 print volumes has been limited, relying on references from other published papers or the limited number of articles that have been made available online by authors. This index serves as resource for individuals to digitally tap into the information published since 1994. This index, together with the first 25-year index, serves to complement the …

Digging For Information: Investigating The Efficacy Of Tracking And Augmenting Lacunicambarus Nebrascensis For Endangered Dragonfly Conservation, Danielle Elaine Tesar

Dissertations and Theses

Restoration and preservation of habitat for threatened and endangered species can proceed in many ways. Augmentation strategies can be used to supplement threatened and endangered populations or the species and resources on which those imperiled species depend. Comprehensive knowledge of species movement and home range is necessary to formulate effective augmentation plans. For freshwater burrowing crayfish, this type of information is generally lacking. The studies reported here were designed to acquire detailed information that is essential for augmentation of the plains devil crayfish, Lacunicambarus nebrascensis (formerly, Cambarus diogenes). Although L. nebrascensis populations are not considered threatened, this crayfish provides vital …

An Optimal Lysis Time Maximizes Bacteriophage Fitness In Quasi-Continuous Culture, Sherin Kannoly, Abhyudai Singh, John J. Dennehy

Publications and Research

Optimality models have a checkered history in evolutionary biology. While optimality models have been successful in providing valuable insight into the evolution of a wide variety of biological traits, a common objection is that optimality models are overly simplistic and ignore organismal genetics. We revisit evolutionary optimization in the context of a major bacteriophage life history trait, lysis time. Lysis time refers to the period spanning phage infection of a host cell and its lysis, whereupon phage progenies are released. Lysis time, therefore, directly determines phage fecundity assuming progeny assembly does not exhaust host resources prior to lysis. Noting that …

Blue Mussel Hybrid Complex Shifts In The Gulf Of Maine Towards A Dominance Of Mytilus Edulis, Daniel Woods

Honors Program Theses

The Gulf of Maine (GOM) in the United States is the fastest warming body of water in the world. Due to a complex history of glaciation, the GOM has restricted circulation that causes it to function more akin to an enclosed sea. As climate change has disrupted the stable flow of the Gulf Stream, more warm-water currents are entering the GOM at higher frequency. This warming has had a profound impact on the distribution of the blue mussel, Mytilus spp., which inhabits the rocky intertidal habitat within the GOM as the main prey species to a keystone predator. Two sister …

Dataset For: Mapping Fire History And Quantifying Burned Area Through 35 Years Of Prescribed Fire History At An Illinois Tallgrass Prairie Restoration Site Using Gis, Erin G. Rowland-Schaefer, Elizabeth M. Bach, Bill P. Kleiman, Holly P. Jones

Research Datasets

Fire was important to pre-colonization prairies. In today’s remnant and reconstructed prairies, managers frequently employ prescribed fire, a historical management practice that limits woody encroachment, suppresses non-native species, and promotes nutrient cycling. However, few long-term prescribed fire spatial datasets are available for study. We used archived images of prescribed fire maps and hand-drawn fire records to generate a geospatial record of the prescribed fire history at Nachusa Grasslands, a combination remnant and restored preserve in northern Illinois. This record contains maps of the prescribed fire history of the preserve across the entirety of its 35-year history. We used the maps …

Plague Risk In The Western United States Over Seven Decades Of Environmental Change, Colin J. Carlson, Sarah N. Bevins, Boris V. Schmid

United States Department of Agriculture Wildlife Services: Staff Publications

After several pandemics over the last two millennia, the wildlife reservoirs of plague (Yersinia pestis) now persist around the world, including in the western United States. Routine surveillance in this region has generated comprehensive records of human cases and animal seroprevalence, creating a unique opportunity to test how plague reservoirs are responding to environmental change. Here, we test whether animal and human data suggest that plague reservoirs and spillover risk have shifted since 1950. To do so, we develop a new method for detecting the impact of climate change on infectious disease distributions, capable of disentangling long-term trends (signal) and …

Analysis Of Hematocrit Levels In Walleye Sander Vitreus From Similar Waterbodies, Alyssa Hauser

Journal of Earth and Life Science

Walleye Sander vitreus are a popular fish among anglers and hold a prominent place in Minnesotan’s identity as their state fish. Because of this, multiple management practices are used to ensure the continued health of their populations within Minnesota waters. In this study, the process of analyzing hematocrit levels was used to determine if the analysis of hematological parameters could be a useful tool in detecting differences in population health. To evaluate this, blood samples were acquired from age-0 and age-1 fish from two similar lakes and run through a hematocrit centrifuge to separate platelets from plasma to read the …

The Effects Of Diet On Yellow Perch Morphology Throughout Lake Bemidji, Quiana L. Radaich

Journal of Earth and Life Science

Morphology is very important as it looks at the arrangement of an organism’s parts to determine their functionality, development, and how they could have changed through evolution. It is also important for the identification of species as it can show how closely species are related. This study examines if the morphology of yellow perch changes throughout Lake Bemidji. Along with examining a subset of five stomachs for each group (A-F) of yellow perch collected to determine if diet was a driving force behind morphological changes. The data collected in this study suggested that morphology does change throughout Lake Bemidji and …

Bottom-Up Effects Of Degradation Outweighs Stabilizing Potential Of Omnivores, Hannah Marie Moore

Murray State Theses and Dissertations

Anthropogenic activities have led to degradation in streams throughout much of Western North America. In particular, cattle grazing has led to a loss of riparian vegetation resulting in higher water temperatures and an increase in nutrient runoff. The effects of degradation on food quality and quantity for aquatic consumers could have large implications for stream communities. Since omnivores feed at multiple trophic levels, they may be resilient to altered food webs, which may allow them to stabilize communities in degraded environments where resources have been reduced. To test the hypothesis that omnivores positively impact community stability in degraded conditions, I …

Fish Communities Respond To Hydrology And Elevation In Restored Western Kentucky Wetlands, Lucas Zuklic

Murray State Theses and Dissertations

The Wetlands Reserve Program (WRP) is designed to restore wetland ecological function and wildlife benefits; however, these projects rarely monitor biological responses. The objectives of our study were to (1) identify environmental factors that were the most important in determining wetland fish community composition, (2) examine the influence of the environment on specific groups of fish (large-river fishes and Kentucky Species of Greatest Conservation Need (KY-SGCN) wetland fishes), and (3) compare fish community composition and diversity in wetlands of different condition (e.g., degraded, restored, and reference). From April 2019 to August 2020, monthly electrofishing surveys were performed in degraded …

Fibropapillomatosis And Chelonid Herpesvirus 5 Dynamics In Juvenile Green Turtles Of The Indian River Lagoon, Florida, Usa, Jake Kelley

Electronic Theses and Dissertations, 2020-2023

Fibropapillomatosis (FP) is a tumor-forming sea turtle disease that mainly affects juvenile green turtles (Chelonia mydas) in coastal foraging sites. The cause of FP is unclear, but likely involves the putative pathogen chelonid herpesvirus 5 (ChHV5). The overall dynamics of this disease are poorly understood, in part due to the difficulty of inferring disease and infection statuses of turtles without evidence of FP. In this study, I investigated the FP disease system in juvenile green turtles of the Indian River Lagoon (IRL), Florida, USA, to better understand disease and pathogen dynamics. First, I developed a hierarchical model for predicting FP …

Forecasting The Outcomes Of Managing A Rare Endemic Plant At Its Elevational Limit Under Climate Change Scenarios, Ethan Reibsome

Cal Poly Humboldt theses and projects

Lupinus constancei (Lassics lupine) is an exceptionally rare forb with a population that in 2020 consisted of 1,300 individuals located on two adjacent mountaintops in northwestern California, USA. Past work has demonstrated the species is threatened by high levels of seed predation by small mammals, which is likely the result of fire exclusion and the subsequent vegetation encroachment that both increases small mammal habitat and directly reduces suitable habitat for the species. Because of this, active management through caging of reproductive individuals to reduce seed consumption has been conducted every year since 2003. In addition, growing season temperatures have increased …

Degradation And Nitrogen Cycling In The Context Of Biodiversity-Ecosystem Function Relationships In The Inquiline Bacterial Community Of Darlingtonia Californica, Megan Teigen

Cal Poly Humboldt theses and projects

Biodiversity-ecosystem function (BEF) research aims to explain how species and their environments interact with each other. Microbial communities engage in vital biogeochemical pathways in a variety of natural ecosystems, and yet there are large knowledge gaps about the specific metabolic pathways in which they are involved. Degradation specifically contributes to nitrogen cycling globally through the breakdown of large organic nitrogen compounds into small inorganic nitrogen that is necessary for the survival of many other organisms. In this study, I focused on the degradative function of the inquiline microbial communities found within the carnivorous pitcher plant, Darlingtonia californica. Darlingtonia grows in …

Final Report Floating Upwelling System Harvest Road Oceans, Robert Michael, Scott Bennett

Fisheries Occasional Publications

A Floating Upwelling System or FLUPSY is a mechanical system for the culture of seed stock during the nursery stage of commercial bivalve production.

Modeling Jadera Haematoloma’S Phenotypic Variation In The Context Of Its Developmental Plasticity, Michael C. Yorsz

Honors Theses

Phenotypic plasticity is the ability of an organism to integrate information from environmental cues to inform the development of its phenotype and remains understudied in biology. Models of plasticity are needed because evolution in the presence of plasticity is poorly understood. Jadera haematoloma, a hemimetabolous true bug, is an excellent animal model of plasticity, exhibiting a non-linear plastic response to juvenile nutrition that biases adult development into groups with differences in flight capability, wing shape, and fecundity. However, there is a lack of literature consensus regarding the range of developmental outcomes in the species. Some publications report the presence …

Editorial: Advances In Understanding Lateral Blue Carbon Export From Coastal Ecosystems, Kai Xiao, Nengwang Chen, Zhaohui Aleck Wang, Joseph James Tamborski, Damien Troy Maher, Xuan Yu

OES Faculty Publications

No abstract provided.

A Subsurface Eddy Associated With A Submarine Canyon Increases Availability And Delivery Of Simulated Antarctic Krill To Penguin Foraging Regions, K. Hudson, M. J. Oliver, J. Kohut, Michael S. Dinniman, John M. Klinck, M. A. Cimino, K. S. Bernard, H. Statscewich, W. Fraser

OES Faculty Publications

The distribution of marine zooplankton depends on both ocean currents and swimming behavior. Many zooplankton perform diel vertical migration (DVM) between the surface and subsurface, which can have different current regimes. If concentration mechanisms, such as fronts or eddies, are present in the subsurface, they may impact zooplankton near-surface distributions when they migrate to near-surface waters. A subsurface, retentive eddy within Palmer Deep Canyon (PDC), a submarine canyon along the West Antarctic Peninsula (WAP), retains diurnal vertically migrating zooplankton in previous model simulations. Here, we tested the hypothesis that the presence of the PDC and its associated subsurface eddy increases …

Bio-Go-Ship: The Time Is Right To Establish Global Repeat Sections Of Ocean Biology, Sophie Clayton, Harriet Alexander, Jason R. Graff, Nicole J. Poulton, Luke R. Thompson, Heather Benway, Emmanuel Boss, Adam Martiny

OES Faculty Publications

In this article, we present Bio-GO-SHIP, a new ocean observing program that will incorporate sustained and consistent global biological ocean observations into the Global Ocean Ship-based Hydrographic Investigations Program (GO-SHIP). The goal of Bio-GO-SHIP is to produce systematic and consistent biological observations during global ocean repeat hydrographic surveys, with a particular focus on the planktonic ecosystem. Ocean plankton are an essential component of the earth climate system, form the base of the oceanic food web and thereby play an important role in influencing food security and contributing to the Blue Economy. Despite its importance, ocean biology is largely under-sampled in …

Temporal Stability Of Seagrass Extent, Leaf Area, And Carbon Storage In St. Joseph Bay, Florida: A Semi-Automated Remote Sensing Analysis, Marie Cindy Lebrasse, Blake A. Schaeffer, Megan M. Coffer, Peter J. Whitman, Richard C. Zimmerman, Victoria J. Hill, Kazi A. Islam, Jiang Li, Christopher L. Osburn

OES Faculty Publications

Seagrasses are globally recognized for their contribution to blue carbon sequestration. However, accurate quantification of their carbon storage capacity remains uncertain due, in part, to an incomplete inventory of global seagrass extent and assessment of its temporal variability. Furthermore, seagrasses are undergoing significant decline globally, which highlights the urgent need to develop change detection techniques applicable to both the scale of loss and the spatial complexity of coastal environments. This study applied a deep learning algorithm to a 30-year time series of Landsat 5 through 8 imagery to quantify seagrass extent, leaf area index (LAI), and belowground organic carbon (BGC) …