Digital Commons Network^™

Individualistic Response Of Piñon And Juniper Tree Species Distributions To Climate Change In North America's Arid Interior West, Jacob R. Gibson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Piñon and juniper tree species have species-specific climatic requirements, resulting in unique distributions and differential responses to climate change. Piñons and junipers co-dominate the arid woodlands of North America as groups with widespread hybridization. Two piñons, Pinus edulis; P. monophylla, and four junipers, Juniperus deppeana var. deppeana; J. monosperma; J. occidentalis; J. osteosperma, are endemic to the midlatitude interior west and form three groups of hybridizing sister species, P. edulis-P. monophylla; J. deppeana var. deppeana-J. monosperma; J. occidentalis-J. osteosperma. Recent droughts have caused widespread mortality among piñons, but have had less impact on …

Riparian Bird-Habitat Association Models: A Framework For Informing Management And Developing Restoration Guidelines In Utah, Hillary M. White

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Approximately 75% of the avian species in Utah use riparian habitats at some time during their life cycles and at least 80% of this habitat in Utah has been lost or altered since settlement; currently 0.6% of land cover in Utah is considered riparian. In 1992, with the support of Utah Partner's in Flight, the Utah Division of Wildlife Resources began a statewide neotropical migratory bird (NTMB) and habitat monitoring program to assess the status of bird populations at 31 sites. Additional sites (up to 52) were added in later years; bird and habitat assessments at 37 riparian sites have …

Behavioral Responses Of Willow Flycatchers, Empidonax Traillii, To A Heterogeneous Environment, Amanda V. Bakian

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Spatial heterogeneity impacts population and community-level dynamics including species-level dispersal patterns, the use and availability of refugia, predator/prey dynamics, and reproductive fitness. Understanding how wild animal populations respond to environmental heterogeneity is essential for their proper management and conservation. In this study, I examine the responses of Willow Flycatchers to spatial heterogeneity in the distribution of their food and habitat resources. Over the course of three breeding seasons, I radio- tracked Willow Flycatchers at Fish Creek in Manti-La Sal National Forest in Utah, recorded detailed behavior data at each radio location, and collected fecal, feather and insect samples. I formulated …

Habitat Characteristics And Occupancy Rates Of Lewis's Woodpecker In Aspen, Amy M. Vande Voort

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Lewis‘ woodpeckers (Melanerpes lewis) are generally associated with open ponderosa pine (Pinus ponderosa), open riparian, and burned pine habitats in the West; however, this species has recently been found to nest in aspen (Populus tremuloides) stands in Utah. This study describes the habitat characteristics of Lewis‘ woodpecker nest sites in aspen and investigates how well aspen stand characteristics predict Lewis‘ woodpecker occupancy. I surveyed for Lewis‘ woodpeckers at previously occupied nesting locations in aspen and took habitat measurements at nest sites. In addition, nest-centered Forest Inventory and Analysis (FIA)-type plots provided stand-level habitat characteristics. I used logistic regression to …

15n Tracer And Modeling Analyses Of Nutrient Transport Through Lakes In A Subalpine Watershed, David M. Epstein

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Lakes have historically been overlooked as important nutrient processors within their watersheds. In general ecologists have focused on streams as zones of uptake and transformation, while viewing lakes as simple nutrient traps. However, recent research has highlighted the large influence that lakes may have on water chemistry within their watersheds. Within the field of limnology, researchers have traditionally focused on the pelagic zone for in-lake production. Further research in shallow lakes has highlighted the role benthic production within the littoral zone plays in the lake ecosystem. The greater influence of lakes is highlighted when comparing watersheds containing lakes with watersheds …

The Decline And Conservation Status Of North American Bumble Bees, Jonathan Berenguer Koch

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Several reports of North American bumble bee (Bombus Latreille) decline have been documented across the continent, but no study has fully assessed the geographic scope of decline. In this study I discuss the importance of Natural History Collections (NHC) in estimating historic bumble bee distributions and abundances, as well as in informing current surveys. To estimate changes in distribution and relative abundance I compare historic data assembled from a >73,000 specimen database with a contemporary 3-year survey of North American bumble bees across 382 locations in the contiguous U.S.A. Based on my results, four historically abundant bumble bees, B. …

Modeling Saltmarsh Sparrow Distribution In Connecticut, Susan T. Meiman

Master's Theses

To develop a map that would predict where saltmarsh sparrows live and reproduce in Connecticut, I compared models to test a) whether field data or remote-sensing data most effectively characterized within-marsh conditions that relate to sparrow occurrence, and b) whether including landscape-level variables improved model fit.  The best sparrow presence model used a variable derived from raw spectral reflectance values associated with plots where sparrows did not occur, while the best nest presence model used a combination of vegetation structure descriptions.   A second nest model, built using high resolution remote sensing data that organized marsh characteristics into high and low …

Community Classification And Distribution Patterns Of Freshwater Mussels Of Strawberry River, Arkansas, Sujata Poudel, David E. Tenenbaum Ph.D, John L. Harris, Alan D. Christian Ph.D

Interdisciplinary Perspectives: a Graduate Student Research Showcase

The purpose of this study is to determine if there are distinct communities of freshwater mussels in the Strawberry River, Arkansas, and if environmental variables influenced these communities.  The Strawberry River watershed is located in the Ozark Mountains in northcentral Arkansas.  Based on previous studies of interior highland mussels, we expected distinct low, mid, and high order stream mussel communities. Mussels were surveyed from headwaters to mouth and resulted in 38 species from 57 sites.  Environmental variables of land cover, geology, soiltype, and drainage area were calculated at local and subwatershed scale using GIS. Mussel presence/absence and environmental variables were …

A Nebraska Bird-Finding Guide, Paul A. Johnsgard

Zea E-Books Collection

Nebraska lies in the transition zone between North American eastern and western avifaunas and is home to more than 200 breeding and 150 migrant species. This definitive guide to Nebraska birdwatching by the state’s preeminent ornithologist includes a county-by-county rundown of the best sites, a calendar of migrations, an annotated checklist of regularly occurring Nebraska birds, and recommendations for optical equipment, publications and reference materials, and contact information for conservation and ornithological groups. It features 48 maps as well as photographs and drawings by the author.

Paul Johnsgard, Foundation Professor Emeritus of Biological Sciences at the University of Nebraska–Lincoln, is …

The Aquarium Trade As An Invasion Pathway In The Pacific Northwest, Angela L. Strecker, Philip M. Campbell, Julian D. Olden

Environmental Science and Management Faculty Publications and Presentations

The aquarium trade moves thousands of species around the globe, and unwanted organisms may be released into freshwaters, with adverse ecological and economic effects. We report on the first investigation of the ornamental pet trade as an invasion pathway in the Pacific Northwest region of the United States, where a moderate climate and a large human population present ample opportunities for the introduction and establishment of aquarium trade species. Results from a regional survey of pet stores found that the number of fish (n=400) and plant (n=124) species currently in the aquarium trade is vast. Pet stores import thousands of …

Chimpanzee Vocal Signaling Points To A Multimodal Origin Of Human Language, Jared P. Taglialatela, Jamie L. Russell, Jennifer A. Schaeffer, William D. Hopkins

Faculty Articles

The evolutionary origin of human language and its neurobiological foundations has long been the object of intense scientific debate. Although a number of theories have been proposed, one particularly contentious model suggests that human language evolved from a manual gestural communication system in a common ape-human ancestor. Consistent with a gestural origins theory are data indicating that chimpanzees intentionally and referentially communicate via manual gestures, and the production of manual gestures, in conjunction with vocalizations, activates the chimpanzee Broca’s area homologue – a region in the human brain that is critical for the planning and execution of language. However, it …

Oral Presentation: Plant Genes And Drought Tolerance, Norris Lam

Festival of Communities: UG Symposium (Posters)

Research has shown that a gene from C3 xerophyte Larrea tridentata (creosote bush), LtWRKY21, is involved in pathways governing creosote bush’s high tolerance to environmental stress. By understanding the way in which creosote bush adapts to drought, crop plants can be engineered to be more drought tolerant during times of imminent global climate change. To study the underlying mechanisms of creosote bush drought response, the LtWRKY21 gene was mobilized into the model organism Arabidopsis thaliana. Chlorophyll degradation, cellular electrolyte leakage, and water content in leaves will serve as indicators of drought tolerance in LtWRKY21-transgenic A. thaliana after treatment in chemically …

Has Recent Climate Change Caused A Genetic Bottleneck In A Sierra Nevada Population Of The Bushy-Tailed Woodrat?, Mitchell Gritts, Angela D. Hornsby, Majorie D. Matocq

Festival of Communities: UG Symposium (Posters)

Many montane species respond to climate change by shifting their range upslope as temperatures at lower elevations increase. An elevation range shift causes a range contraction that may result in a population bottleneck. Joseph Grinnell surveyed the fauna along the Yosemite transect from 1914 to 1920. In 2003 Craig Moritz and his colleagues began to resurvey the Yosemite transect to assess the faunal change during a century of climate change. The bushy-tailed woodrat suffered severe range contraction and population bottleneck between the two surveys. I will use evolutionary models to determine if the population has suffered a genetic bottleneck.

Does Thermal Stress Cause Females Of The Plant Bryum Argenteum To Manipulate The Sex Ratios Of Their Offspring?, Elisha Rhodes, Lloyd Stark

Festival of Communities: UG Symposium (Posters)

About half of all moss taxa exhibit female-biased sex ratios, and bryophyte male rarity remains largely unexplained. One possible explanation is differential stress tolerance of spores due to maternal sporophyte manipulation during stress. To test this hypothesis, sporophytes of the species Bryum argenteum were subjected to thermal stress and observed for growth abnormalities and sporophyte abortions. Data display a correlation between increased temperature and increased sporophyte abortions as well as increased time to complete meiosis, possibly indicating decreased fitness. Continued global warming may create more stressful environments for sporophytes resulting in the elimination of males from local populations.

Stationary Phase Mutagenesis In Bacillus Subtilisis Independent Of Genome Replication, Mark Upchurch, Holly Martin, Eduardo Robleto

Festival of Communities: UG Symposium (Posters)

Stationary phase mutagenesis is defined as cellular mechanisms that produce genetic diversity in cells experiencing conditions of stress. These processes are associated with many biological phenomena, including those that produce the formation of cancers in animal cells and other degenerative diseases. Also, these mechanisms are associated with the accumulation of beneficial mutations in bacteria, but follow stochastic processes and are controlled by genetic factors. The current models explaining the generation of stress-induced mutations are predicated on the formation of DNA replication intermediates that are formed during the repair of damaged DNA or during DNA replication and transcription encounters. Here we …

Wetland Management Guidelines For Nebraska's Wildlife Management Areas, Ted Lagrange, Randy Stutheit

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

Prior to Euro-American settlement, wetlands covered about 6% of the Nebraska landscape. Since settlement, the state’s wetlands have suffered serious decline. For example, approximately 90% of Rainwater Basin playa wetlands and 90% of the eastern saline wetlands have been destroyed or are highly degraded. Remaining wetlands are threatened by conversion to other uses (e.g. agriculture), invasive and aggressive vegetation, siltation, and lack of proper management. Only through sound management can the wetlands on our Wildlife Management Areas (WMA) be preserved for the citizens of Nebraska, as well as the native plants and wildlife dependent on them.

This section is directed …

Determining The Composition Of The Dwelling Tubes Of Antarctic Pterobranchs, Lukasz J. Sewera

Honors Projects

Pterobranchs are a group of marine invertebrates within the Hemichordata, which share characteristics with both chordates and echinoderms.  Pterobranchs live in colonies of secreted tubes, coenicia, which are composed of a gelatinous material of unknown composition.  Visually, the tubes appear similar to the tunic of tunicates, a group of invertebrates within the Chordata. The nonproteinaceous tunic of tunicates is composed of cellulose, which is unusual.  The goal of this study was to determine the composition of the pterobranch coenicium. Some aspects of pterobranch phylogeny are still unclear even after multiple molecular and morphological studies.  Identification of any new shared characteristics …

Literary Genesis, Stephanie Wood '11

Honor Scholar Theses

No abstract provided.

Assortative Mating In Fallow Deer Reduces The Strength Of Sexual Selection, Mary E. Farrell, Elodie Briefer, Alan G. Mcelligott

Veterinary Science and Medicine Collection

Background: Assortative mating can help explain how genetic variation for male quality is maintained even in highly polygynous species. Here, we present a longitudinal study examining how female and male ages, as well as male social dominance, affect assortative mating in fallow deer (Dama dama) over 10 years. Assortative mating could help explain the substantial proportion of females that do not mate with prime-aged, high ranking males, despite very high mating skew. We investigated the temporal pattern of female and male matings, and the relationship between female age and the age and dominance of their mates.

Results: The peak of …

The Genus Butheoloides Hirst, 1925 (Scorpiones, Buthidae) In Morocco, With A Description Of А New Species, Wilson R. Lourenço, Oulaid Touloun, Ali Ali Boumezzough

Euscorpius

A new species belonging to the genus Butheoloides Hirst, 1925 (subgenus Butheoloides Hirst, 1925) (Scorpiones, Buthidae) is described from two localities in Morocco: north of Sidi Ifni in the southern coast and Sidi Moussa west of Tiznit. With the description of Butheoloides (Butheoloides) littoralis sp. n., the total number of species of this genus known from Morocco is raised to five. This makes Morocco the region in Africa with the highest diversity for Butheoloides species.

Episodic Radiations In The Fly Tree Of Life, Brian M. Wiegmann, Michelle D. Trautwein, Isaac S. Winkler, Norman B. Barr, Jung-Wook Kim, Christine Lambkin, Matthew Bertone, Brian Cassel, Keith Bayless, Alysha Heimberg

Dartmouth Scholarship

Flies are one of four superradiations of insects (along with beetles, wasps, and moths) that account for the majority of animal life on Earth. Diptera includes species known for their ubiquity (Musca domestica house fly), their role as pests (Anopheles gambiae malaria mosquito), and their value as model organisms across the biological sciences (Drosophila melanogaster). A resolved phylogeny for flies provides a framework for genomic, developmental, and evolutionary studies by facilitating comparisons across model organisms, yet recent research has suggested that fly relationships have been obscured by multiple episodes of rapid diversification. We provide a phylogenomic …

The Future Of Blue-Winged And Golden-Winged Warblers In Connecticut, Robert A. Askins

Biology Faculty Publications

No abstract provided.

Predators Of Enashiva: A Survey Of Occurrence & Distribution, Adrienne Fisk Bowles

Independent Study Project (ISP) Collection

This study was conducted during a period of 16 days (April 10 to April 26, 2011) at the Enashiva Nature Refuge in Northern Tanzania. It was a modified repeat study, using the same methodologies of a mammal survey conducted in November 2009, however this study only focused on occurrence and distribution of predators in the highest trophic level and accounted for reptile and birds, in addition to mammals. Based upon the findings of the November 2009 study, it was hypothesized that the woodland would have the highest predator species richness. This hypothesis was supported by the data; the woodland habitat …

A Current Bibliographic Resource For The Red-Cockaded Woodpecker, Federal Wildlife Service

Faculty Publications

No abstract provided.

Historic And Contemporary Trends Of The Conservation Reserve Program And Ring-Necked Pheasants In South Dakota, Christopher R. Laingen

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

Over the past century, the interactions between agricultural land use and government cropland retirement programs have affected pheasant population change. Two government land retirement programs that returned croplands to grasslands, Soil Bank in the 1960s and the current Conservation Reserve Program (CRP), help to illustrate these connections. From 2007 to 2010, South Dakota lost 41% of its CRP lands and experienced an 18% decline in pheasants per mile. However, because of where CRP expirations have occurred and where pheasant populations are found, some regional variability is seen. Western South Dakota (Region 1) had an 80% increase in pheasants per mile …

Review Of Nature's Ghosts: Confronting Extinction From The Age Of Jefferson To The Age Of Ecology. By Mark V. Barrow, Jr., Peter A. Bednekoff

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

The saving of bison occupies a central place in Nature's Ghosts, but Mark Barrow's chronicle extends over a century both before and after. The story starts with Thomas Jefferson and fossils that came to be recognized as mastodons, mammoths, and giant ground sloths. "Jefferson and most of his contemporaries were certain that the natural world was orderly, static, and new." In such a worldview, extinction was unthinkable. Fossil evidence plus the historical extinctions of dodos, moas, and great auks forced reconsideration.

This book ranges across centuries and continents, and only a few parts of it are explicitly about the Great …

Review Of The Ecology And Management Of Prairies In The Central United States. By Chris Helzer., David J. Gibson

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

This relatively short book is an informative and easyto- read account of the author's philosophy and advice on how to manage prairies in the Central U.S., an area corresponding to the eastern portion of the Great Plains where tall- and mixed-grass prairie occurred. With fragmentation and huge losses of this region's natural prairie habitat, there is a growing appreciation for active management of remnants and prairie restoration. This book provides an excellent introduction to this topic.

Health And Fertility Implications Related To Seasonal Changes In Kidney Fat Index Of White-Tailed Jackrabbits In South Dakota, Dustin Schaible, Charles D. Dieter

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

White-tailed jackrabbit (Lepus townsendii) populations in the Northern Plains have been in a general decline for the past decade or longer. A suggested reason for this population decline was reduced body condition of individual jackrabbits due to habitat changes. In order to evaluate body condition, we determined the kidney fat index of 314 white-tailed jackrabbits harvested in 44 counties throughout South Dakota. We removed and weighed kidneys and all perirenal fat associated with the kidneys from collected jackrabbits. We measured kidney weight to determine times of high metabolic activity as indicated by an increase in mass. Body condition was …

Governance Of The Western Rock Lobster Fishery And Marine Stewardship Council Principle 3 Effective Management, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Draft Genome Of The Red Harvester Ant Pogonomyrmex Barbatus, Chris R. Smith, Christopher D. Smith, Hugh M. Robertson, Martin Helmkampf, Aleksey Zimin, Mark Yandall, Carson Holt, Hao Hu, Ehab Abouheif, Richard Benton, Elizabeth Cash, Vincent Croset, Cameron R. Currie, Eran Elhaik, Christine G. Elsik, Marie-Julie Favé, Vilaiwan Fernandes, Joshua D. Gibson, Dan Graur, Wulfila Gronenberg, Kirk J. Grubbs, Darren E. Hagen, Ana Sofia Ibarraran Viniegra, Brian R. Johnson, Reed M. Johnson, Abderrahman Khila, Jay W. Kim, Kaitlyn A, Mathis, Monica C. Munoz-Torres, Marguerite C. Murphy, Julie A. Mustard, Rin Nakamura, Oliver Niehuis, Surabhi Nigam, Rick P. Overson, Jennifer E. Placek, Rajendhran Rajakumar, Justin T. Reese, Garret Suen, Shu Tao, Candice W. Torres, Neil D. Tsutsui, Lumi Viljakainen, Florian Wolschin, Jürgen Gadau

Department of Entomology: Faculty Publications

We report the draft genome sequence of the red harvester ant, Pogonomyrmex barbatus. The genome was sequenced using 454 pyrosequencing, and the current assembly and annotation were completed in less than 1 y. Analyses of conserved gene groups (more than 1,200 manually annotated genes to date) suggest a high-quality assembly and annotation comparable to recently sequenced insect genomes using Sanger sequencing. The red harvester ant is a model for studying reproductive division of labor, phenotypic plasticity, and sociogenomics. Although the genome of P. barbatus is similar to other sequenced hymenopterans (Apis mellifera and Nasonia vitripennis) in …