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Defining The Physiochemical, Biological And Habitat Requirements For The Upper Extant Of Oncorhynchus Mykiss Distribution, Emily Powers

Journal of Earth and Life Science

The distribution of rainbow trout is strongly influenced by their habitat. As climatic conditions change, the distribution of rainbow trout populations will change along with them. The objective of this study was to identify the particular habitat parameters that rainbow trout select for in this lotic system and to specifically assess how this relates to the upper extant of their distribution. By assessing the distribution of the upper extant specifically, future research may be conducted to better assess climatic changes on a small and/or large scale basis. A 9,000 m section of the Clearwater River was used as the study …

The Effects Of Angling Pressure On Northern Pike Size Structure, Ryan Carrow

Journal of Earth and Life Science

A number of conditions within a lake system can affect northern pike (Esox lucius) size structure. Of these conditions, the amount of angling pressure may have the biggest effect on the size structure of northern pike in Minnesota lake systems. In this study, five private and five public lakes were chosen near Bemidji, Minnesota. Each lake was fished for twenty angling hours using live northern hog suckers (Hypentelium nigricans) or golden shiners (Notemigonus crysoleucas). Total length (mm) and weight (kg) were measured for each northern pike caught. The number of fish houses that were …

Distribution, Habitat Preference, And Status Of The Ditch Fencing Crayfish, Faxonella Clypeata (Hay) (Decapoda: Cambaridae), In Arkansas, H. W. Robison, C. T. Mcallister

Journal of the Arkansas Academy of Science

The ditch fencing crayfish, Faxonella clypeata (Hay), is a common and widespread crayfish that inhabits roadside ditches, intermittent first-order streams, shallow sloughs with heavy vegetation, and edges of swamps in Arkansas. Between 1997-2012, we made 55 collections of F. clypeata in 34 counties throughout eastern Arkansas, including 23 counties where F. clypeata had not been previously documented. At most of these locations within the West Gulf Coastal and Mississippi Alluvial Plain provinces, F. clypeata was found to be a locally abundant crayfish. With regard to conservation status, F. clypeata should be considered as “Currently Stable” due to its widespread distribution …

Urban Stream Syndrome In A Small Town: A Comparative Study Of Sager And Flint Creeks, T. S. Wakefield

Journal of the Arkansas Academy of Science

Utilizing rapid bioassessment procedures and aquatic physiochemical techniques, a three-year investigation of Sager and Flint creeks was completed. Bioassessment indices and physiochemical parameters of the 2 streams were compared and the effects of urbanization on both watersheds were assessed. Correlating data concerning land usage in both watersheds and alterations of both streams' geomorphology were also utilized to conclude that Sager Creek shows a higher degree of urban stream syndrome than Flint Creek.

Disturbed Waters – A Montana Chemist Searches For The Source Of A Persistent Poison, Kindra Mcquillan

Graduate Student Theses, Dissertations, & Professional Papers

In December 2008, when Montana's great Clark Fork River tested its historic banks for the first time in 100 years, a crowd of hundreds gathered to watch the removal of Milltown Dam at the confluence of the river with the Big Blackfoot. After a century of pollution from Butte's copper mines, the river was undergoing the nation's largest­yet restoration project, the Upper Clark Fork River Superfund Complex.

But in a windowless laboratory a mile away, University of Montana chemist Heiko Langner had troubling news. Toxic methylmercury flowed through the river at concentrations of concern, undetected and undermining the project. It …

Do Artificial Riffles Enhance Nutrient Retention In Restored Streams?, Adam Thomas Hughes

Masters Theses

Kickapoo Creek, a tributary of the Embarrass River in Central Illinois, has undergone a stream restoration that included the construction of two artificial riffles. These structures were designed to slow flood waters, increase channel and substrate stability, and increase habitat heterogeneity in a stream impacted by erosion and sediment deposition. They may also provide stable substrates that affect the algal community, leading to shifts in algal community composition, increases in the biomass of primary producers, and subsequent increases in nutrient retention. I explored the effects of the restoration on instream nutrient retention by measuring and comparing phosphate uptake lengths, velocities, …

Habitat Associations Of Larval And Juvenile Fishes In A Large Unimpounded River, Sharon V. Rayford

Masters Theses

Larval and juvenile life stages of fish are numerically the dominant component of fish populations. These early life stages experience high levels of mortality due, in part, to anthropogenic disturbances, but little is known about which habitats they utilize in large-rivers, as they are often difficult to sample and identify. My study examined the larval and juvenile fish assemblages in different habitats within the lower 322 km of the Wabash River. Fish were sampled with a conical-cylindrical ichthyoplankton net (larvae) and a DC-electrified mini-Missouri trawl (juveniles) between May and October 2013. Larval fish were collected every two weeks from mid-May …

Aspects Of The Trophic Ecology Of An Invertivorous Snake Community, Meagan Amanda Thomas

Masters Theses

Understanding the significance of trophic links has been of interest to ecologists for decades, likely because food web studies have the potential to reveal a considerable amount of information in the fields of ecosystem and community ecology. Despite the intrinsic benefits that come from elucidating food web structures, doing so is often problematic because of the complex and dynamic nature of ecological communities. The dietary ecology of small-bodied invertivorous snakes remains relatively understudied compared to other snake species. Many of these species are abundant throughout their range, making them ideal organisms for studying community-level questions. I employed a combination of …

Effects Of Dams On Fish And Macroinvertebrate Communities In The Vermilion River, Il, Ryan Patrick Hastings

Masters Theses

Dams are a main source of anthropogenic disturbances on river systems and can affect rivers in a variety of ways. Dams have the ability to change rivers from lotic to lentic habitats, affect sediment transportation, connectivity, water quality, linkages with wetlands and the quality of in-stream and riparian habitats. The Danville Dam was constructed in 1914 on the Vermilion River in Danville, Illinois and is becoming a safety hazard for human recreation on the Vermilion River, resulting in three deaths in the last 10 years. The Illinois Department of Natural Resources in conjunction with the city of Danville has proposed …

Aquatic Priming Effects In The York River Estuary And Implications For Dissolved Organic Carbon Mineralization, Thomas M. Dunlap

Theses and Dissertations

The priming effect (PE), characterized as the enhanced microbial processing of bio-recalcitrant organic matter with the addition of labile substrates, has been hypothesized to moderate carbon (C) cycling in aquatic systems. In this study, aquatic PEs were evaluated through bacterial respiration and dissolved organic C consumption in incubations of water collected from three locations along the York River estuary. Incubations from White’s Landing on the Pamunkey River, a tidal freshwater tributary of the York, and from Croaker Landing in the middle of the estuary, displayed positive PEs when amended with labile C. In contrast, amended incubations from Gloucester Point, near …

Belowground Advantages In Construction Cost Facilitate A Cryptic Plant Invasion, Joshua Caplan

Biology Faculty Research and Scholarship

The energetic cost of plant organ construction is a functional trait that is useful for understanding carbon investment during growth (e.g. the resource acquisition vs. tissue longevity tradeoff), as well as in response to global change factors like elevated CO2 and N. Despite the enormous importance of roots and rhizomes in acquiring soil re- sources and responding to global change, construction costs have been studied almost exclusively in leaves. We sought to determine how construction costs of aboveground and belowground organs differed between native and introduced lineages of a geographically widely dispersed wetland plant species (Phragmites australis) under varying levels …

The Movement Of Escherichia Coli And Enterococci Among Beach Sand, Lyngbya Wollei, And The Water Column: Implications For Human Health, Krystal Ann Bakkila

Wayne State University Theses

Occurrence of the filamentous cyanobacteria Lyngbya wollei has become an increasing concern in the Great Lakes region. Prior to the early 1900's, L. wollei had been occasionally documented in the Great Lakes region, but in the last decade it has been observed with increasing frequency. In the Great Lakes L. wollei has been proliferating, fragmenting, and accumulating ashore, where it decays forming thick detrital mats harboring potentially harmful bacteria such as Escherichia coli and enterococci. While the filamentous green algae species Cladophora glomerata has been well studied in this region, very little research has been done on the cyanobacteria L. …

The Effects Of Phragmites Australis Litter On Seed Emergence In The Erie-Huron Corridor, Michigan, Travis White

Wayne State University Theses

The invasive reed, Phragmites australis, is widespread within the Great Lakes region, and is often blamed for habitat degradation. Once established, it creates dense litter mats that may persist following remediation efforts of living stock removal. We investigated the effects of P. australis and Typha angustifolia, narrow-leaf cattail, litter on seedling emergence from the native seed bank by harvesting soils from five Great Lakes coastal marshes densely populated by either Phragmites or Typha and exposing them to Phramities or Typha litter in treatments of varying litter depths. Seedling emergences were quantified for six weeks. Soils from Phragmites dominated sites had …

Trait Evolution In Anseriformes: Is Evolution Of Body Mass, Diet, Locomotory Behavior, And Diel Activity Pattern Correlated?, Zoe M. Kao

Scripps Senior Theses

The morphologies and behaviors of animals evolve and diversify, filling ecological niches in their environments. In this study I examine how a morphological trait, body mass, and three ecological traits, namely diel activity patterns, diving/non-diving locomotion, and diet, evolve in the Anseriformes (waterfowl). Through ancestral state reconstructions using a maximum likelihood approach the evolution of these traits was compared to see if any patterns of trait coevolution emerged. Body mass was compared to each ecological trait using a phylogenetic ANOVA to test if there were body size differences between ecological groups. The pattern of male and female body mass evolution …

Effects Of Extreme Hydrologic Events On Trout Populations And Fish Communities In A Catskill Mountain River, Scott Daniel George

Legacy Theses & Dissertations (2009 - 2024)

Extreme hydrologic events are becoming more common with changing climatic conditions. Although the impacts of winter and spring floods on lotic ecosystems have been well studied, the effects of summer floods on fish assemblages in mountain streams are less well known. This study took advantage of an extreme precipitation event during the course of an ongoing monitoring program, which allowed the opportunity to quantify the effects of a severe late summer flood on fish communities in a montane watershed. We also evaluated the effect of the flood on the density and age structure of two ecologically important populations of sport …

Sound Environment Programming The Post-1945 Moment : Charles Olson, Sun Ra, John Cage, And The Way Back In, Michael Peters

Legacy Theses & Dissertations (2009 - 2024)

On the eve of 1945, when the Manhattan Project's machinations to split the atom were almost in place, another physicist published a little book--What Is Life? Applying physics to biology, Erwin Schrödinger described how genetic "code-script" could create aperiodic (non-repeating) new life from periodic materials, revealing the "secret" of life. This dilemma of life or death defines the post-1945 moment. Fraught with Hamlet-like uncertainty, I argue this moment is the apex of a long-fomenting, eco-historical crisis where Western thinking had severed "Man" from "Nature." Sound Environment Programming is a term I invented to detail how Charles Olson, Sun Ra, and …

Angler Effort And Catch Within A Spatially Complex System Of Small Lakes, Christopher J. Chizinski, Dustin R. Martin, Kevin L. Pope, Tony J. Barada, Jeffrey J. Schuckman

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Spatial layout of waterbodies and waterbody size can affect a creel clerk’s ability to intercept anglers for interviews and to accurately count anglers, which will affect the accuracy and precision of estimates of effort and catch. This study aimed to quantify angling effort and catch across a spatially complex system of19 small (<100 ha) lakes, the Fremont lakes. Total (±SE) angling effort (hours) on individual lakes ranged from 0 (0) to 7,137 (305). Bank anglers utilized 18 of the 19 lakes, and their mean (±SE) trip lengths(hours) ranged from 0.80 (0.31) to 7.75 (6.75), depending on the waterbody. In contrast, boat anglers utilized 14 of the 19 lakes, and their trip lengths ranged from 1.39 (0.24) to 4.25 (0.71), depending on the waterbody. The most sought fishes, as indexed by number of lakes on which effort was exerted, were anything (17 of 19 lakes), largemouth bass Micropterus salmoides (15 of 19 lakes), and channel catfish Ictalurus punctatus (13 of 19 lakes). Bluegill Lepomis machrochirus, crappie Pomoxis spp., and largemouth bass were caught most frequently across the lakes, but catch rates varied considerably by lake. Of the1,138 parties interviewed, most parties (93%) visited …

Growth Of Bald Cypress Boles And Knees As Influenced By Precipitation And Inundation At Sardis Lake, Mississippi, Emily M. Stauss

Electronic Theses and Dissertations

The growth of bald cypress (Taxodium distichum) boles and knees in response to inundation and precipitation over small (< 4 m) elevation gradients was examined by measuring interannual growth increments of boles and knees at five sites at Sardis Lake, Mississippi. There was a significant (p=0.019) growth response to precipitation during November to April (the wet season), but there was not a significant growth response to inundation during the growing season (May to October). Because lake level at Sardis is controlled by the Army Corps of Engineers for flood control, the Sardis Lake shoreline area may be a habitat where growth response to precipitation and inundation differs from systems where precipitation and inundation are linked. The growth of knees from bald cypress roots was compared to growth of the boles in order to determine if knees and boles respond to the same environmental factors. It was found that the knees have high positive correlation coefficients when compared to the tree's bole if we assume that knee growth is initiated in response to a major flood event. If we assume knees grow in response to stress that limits bole growth, we would expect but do not find any discernable relationship between the initiation of knee growth and the timing of flood events.

Temporal Patterns Of Aquatic Macroinvertebrate Communities And Organic Matter Standing Stock Availability In A Coastal Floodplain (Altamaha River, Georgia), Erica L. Johnson

College of Graduate Studies: Theses & Dissertations

River floodplain habitats of the Southeastern United States are sites of high biological productivity that rely on a predictable flooding event as a keystone process. This study took place in a river-floodplain area of the Altamaha River, an unimpounded large-order river in the Coastal Plains region of the US. This study aims to investigate how aquatic macroinvertebrate communities changed over the course of the annual flood pulse. I predicted that the communities would be different and that the differences would be driven by hydrology at the main stem and organic matter standing stock availability. I took quantitative samples of benthic …

Approaches To Improving Detection Of Invasive Fish Species In Western Lake Erie Through Analysis Of Monitoring Efficiencies And Metrics Of Community Distribution, Joshua Alan Southern

Wayne State University Theses

Efficient monitoring programs are essential for the early detection of invasive species. The Ohio Department of Natural Resources (ODNR) monitoring program encompassing 21 years of fish survey data from western Lake Erie was evaluated using Chao biodiversity analysis to determine the efficiency and precision of collection strategies of trawl and gillnet sampling, at detecting rare or non-native species. Overall, ODNR sampling annually accounted for ~80% of extant fish species, leaving gaps in coverage where rare and invasive species may be overlooked and proliferate.Obtaining 90% efficiency would require an estimated doubling of previous sampling effort. Computer simulations calculating different proportions of …

Rates And Modes Of Sequence Evolution In Various Lineages Within Chenopodiaceae, James Andrew Naeger

Wayne State University Theses

Sexual dimorphism in domesticated spinach, Spinacia oleracea, is thought to be determined by differential expression of floral organ identity genes. We examined the floral organ morphologies of seven species in the Chenopodiaceae, including two wild species of spinach, in order to gain insight into the evolution of floral reproductive strategy in this clade. The species within the Anserineae demonstrate extensive evolution in floral morphology and reproductive strategy, and Spinacia is unique for having been domesticated rather recently and for being dioecious. We found C. album to be hermaphroditic, C. foliosum and M. nuttalliana to be gynomonoecious, while C. bonus-henricus …

Assessing Grazing Impacts On A Tropical Dry Forest System In Madagascar Through Vegetation, Satellite Image, Lemur Occupancy, And Acoustic Analysis, Lyndsay Lee Rankin

Theses, Dissertations and Capstones

The ability to assess the quality or ecological value of a landscape is a useful tool in effective conservation and natural resource management. Ecosystem biodiversity and functionality are reduced when human activities cause habitat alteration and/or fragmentation. Compromised habitats are unlikely to support naturally occurring communities or healthy ecosystem functions. Conservation scientists have historically concentrated their efforts on large, intact habitats with little human disturbance; the conservation value of small and/or disturbed areas has been comparatively overlooked. One limitation may be a lack of tools to identify disturbed areas with conservation value. Techniques that allow researchers to assess the habitat …

Monitoring Ship Noise To Assess The Impact Of Coastal Developments On Marine Mammals, Nathan D. Merchant, Enrico Pirotta, Tim R. Barton, Paul M. Thompson

Biology - All Scholarship

The potential impacts of underwater noise on marine mammals are widely recognised, but uncertainty over variability in baseline noise levels often constrains efforts to manage these impacts. This paper characterises natural and anthropogenic contributors to underwater noise at two sites in the Moray Firth Special Area of Conservation, an important marine mammal habitat that may be exposed to increased shipping activity from proposed offshore energy developments. We aimed to establish a pre-develop- ment baseline, and to develop ship noise monitoring methods using Automatic Identification System (AIS) and time-lapse video to record trends in noise levels and shipping activity. Our results …

Evolution, Snakes, And God: A Brief Argument For Agreement, Jessica Stanze

A with Honors Projects

Comparing the evolution and religious connotations of the snake, this short essay suggests that evolutionists and creationists might reach common ground if they attempted to collaborate.

The Distribution Of Fitness Effects Of Spontaneous Mutations In Vibrio Fischeri, Chelsea K. Jones

Honors Theses and Capstones

Mutations are the ultimate source of the biological diversity on which natural selection acts, but the vast majority of these mutations are harmful. As such, mutations lead to disease states like cancer, extinction of small populations, and can drive pathogen evolution. Unfortunately, because mutations are rare and past studies have been subject to detection biases, very little is known about the distribution of fitness effects from naturally occurring mutations. In this study, we used mutation accumulation and full genome sequencing to capture naturally occurring mutations before they were exposed to the sieve of natural selection in Vibrio fischeri. We …

Wild Bees Preferentially Visit Rudbeckia Flower Heads With Exaggerated Ultraviolet Absorbing Floral Guides, Lisa Horth, Laura Campbell, Rebecca Bray

Biological Sciences Faculty Publications

Here, we report on the results of an experimental study that assessed the visitation frequency of wild bees to conspecific flowers with different sized floral guides. UV absorbent floral guides are ubiquitous in Angiosperms, yet surprisingly little is known about conspecific variation in these guides and very few studies have evaluated pollinator response to UV guide manipulation. This is true despite our rich understanding about learning and color preferences in bees. Historical dogma indicates that flower color serves as an important long-range visual signal allowing pollinators to detect the flowers, while floral guides function as close-range signals that direct pollinators …

Reproductive Biology Of The Bonnethead (Sphyrna Tiburo) From The Southeastern U.S. Atlantic Coast, Melissa I. Gonzalez De Acevedo

UNF Graduate Theses and Dissertations

Understanding the life history of marine wildlife is essential for the management of both commercial and recreational fisheries. Bonnetheads (Sphyrna tiburo) are a component of the small coastal shark (SCS) fishery complex, and are caught regularly in both types of fisheries. Despite being well studied in the Gulf of Mexico, little is known about bonnetheads from the U.S. Atlantic coast. The goal of the first component of this study was to provide new, key information on their life history to improve management of U.S. Atlantic populations, particularly by identifying reproductive seasonality, periodicity and fecundity. This was accomplished by examining sexually …

Effects Of Elevated Salinity And Oxidative Stress On The Physiology Of The Toxigenic Cyanobacterium Microcystis Aeruginosa, Billy Christopher Warhurst

UNF Graduate Theses and Dissertations

Harmful algal blooms (HABs) are found worldwide, particularly in places where warm, well-lit, and stagnant waters are common. HABs can have negative effects on aquatic plants and wildlife due to the reduction in light availability associated with turbidity, decrease in O₂ availability, and the production of secondary metabolites that can harm or even prove lethal. Aquatic ecosystems are regularly being affected by elevated salinity because of recent water management strategies, episodes of drought, and salt water intrusion. This research focused on how salinity levels ranging from 0-10ppt affected physiological attributes such as cellular growth and abundance, cell mortality, toxin …

Extinction Risk And Conservation Of The World's Sharks And Rays, Nicholas K. Dulvy, Sarah L. Fowler, John A. Musick, Rachel D. Cavanagh, Peter M. Kyne, Lucy R. Harrison, John K. Carlson, Lindsay N. K. Davidson, Sonja V. Fordham, Malcolm P. Francis, Caroline M. Pollock, Colin A. Simpfendorfer, George H. Burgess, Kent E. Carpenter, Leonard J. V. Compagno, David A. Ebert, Claudine Gibson, Michelle R. Heupel, Suzanne R. Livingstone, Jonnell C. Sanciangco, John D. Stevens, Sarah Valenti, William T. White

Biological Sciences Faculty Publications

The rapid expansion of human activities threatens ocean-wide biodiversity. Numerous marine animal populations have declined, yet it remains unclear whether these trends are symptomatic of a chronic accumulation of global marine extinction risk. We present the first systematic analysis of threat for a globally distributed lineage of 1,041 chondrichthyan fishes-sharks, rays, and chimaeras. We estimate that one-quarter are threatened according to IUCN Red List criteria due to overfishing (targeted and incidental). Large-bodied, shallow-water species are at greatest risk and five out of the seven most threatened families are rays. Overall chondrichthyan extinction risk is substantially higher than for most other …

Concordance Between Phylogeographic And Biogeographic Boundaries In The Coral Triangle: Conservation Implications Based On Comparative Analyses Of Multiple Giant Clam Species, Timery S. Deboer, Maria Rio Abdon Naguit, Mark V. Erdmann, Maria Carmen A. Ablan-Lagman, Ambariyanto, Kent E. Carpenter, Abdul Hamid A. Toha, Paul H. Barber

Biological Sciences Faculty Publications

Marine habitats are in decline worldwide, precipitating a strong interest in marine conservation. The use of biogeographic data to designate ecoregions has had significant impacts on terrestrial conservation efforts. However, classification of marine environments into ecoregions has only become available in the last several years, based on biogeographic data supplemented by geomorphology, ocean currents, and water temperatures. Here we use a comparative phylogeographic approach to test for concordant phylogeographic patterns in three closely related species of Tridacna giant clams across the Coral Triangle, the most biodiverse marine region in the world and one of the most threatened. Data from a …