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Monitoring The Seasonal Presence Of The Blue Shiner, Cyprinella Caerulea, In Little River Canyon National Preserve Using Environmental Dna, Deanna Meadows

Theses

The study of environmental DNA (eDNA) has provided researchers with a more accessible and sensitive way to identify the presence of specific species compared to traditional monitoring methods. eDNA enables species detection by analyzing environmental samples such as water or soil, which contain genetic material shed by organisms in a given area. Research indicates that eDNA techniques have become a valuable method for monitoring threatened and invasive species, proving particularly reliable for detecting aquatic species compared to traditional techniques. Quantitative PCR (qPCR) has been used in numerous eDNA studies, as it provides for greater accuracy than conventional PCR. Cyprinella …

Précis Of: "Birds, Bats And Minds: Tales Of A Revolutionary Scientist, Donald R. Griffin", Carolyn A. Ristau

Animal Sentience

Donald Griffin co-discovered bat sonar and founded the field of echolocation. He studied bird migration and founded Cognitive Ethology, the study of animal awareness and mental experiences. In all these endeavors, he faced hostile opposition. The biography (Ristau 2024) examines Griffin's life and the scientific explorations by him and others in these fields. This Précis emphasizes his arguments and supporting evidence for animal consciousness as well as his later research. Griffin considered the inhibiting assumptions made by scientists, including Cartesian views, the misunderstanding of innate behaviors, prejudice against lower animals, concern with violations of parsimony, and the assertions of the …

Arthropod Arbiters: Natural Enemy Communities Mediate The Effects Of Landscape And Local-Scale Complexity On Lygus-Induced Crop Loss In Organic Strawberries, Adrian Lu, David J. Gonthier, Amber Sciligo, Karina Garcia, Taiki Chiba, Gila Juárez, Claire Kremen

Entomology Faculty Publications

Sustainable pest management requires growers and regional land managers to consider the relationships among pest management practices, pest and natural enemy communities, crop loss, and multi-scalar habitat complexity. However, the causal links among these variables, in particular potential interactions between landscape and local-scale habitat complexity, remain underexplored. In the context of organically managed strawberry crops in California’s Central Coast, we tested the independent effects of landscape and local habitat complexity gradients on arthropod communities and crop loss using a piecewise structural equation model (PSEM). We found that landscape-scale woody habitat proportion indirectly decreased crop loss through its positive effect on …

Red Fox, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

This factsheet provides information on the red fox in Western Australia (WA).

The red fox (Vulpes vulpes) is a native of the northern hemisphere where it occurs throughout most of Europe, Asia, North America, and the northern coast of Africa. The red fox was first introduced to Australia (Victoria) from Britain as early as 1845 for hunting with foxhounds. Having become successfully established in Victoria by about 1870, it colonised most of mainland Australia over the next 70 years. Foxes are not found in the most northern regions of Australia, including northwest Kimberley.

In WA, the fox is a declared …

Rabbit Control: Fumigation, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

Fumigation for rabbit control involves the introduction of poisonous gas into a warren. It is one of the best control methods to use where low numbers of rabbits live in a few widely scattered warrens. The threat to non-target animals is minimal. This factsheet should be read in conjunction with registered product labels and directions for use. Check the Department of Health, Western Australia website (health.wa.gov.au) for public health requirements for the use of phosphine fumigation.

Fumigation may be used in areas where access is limited, such as fence lines, around trees, and on riverbanks, but it may be difficult …

Psychological And Social Well-Being Of Bony Fishes In Zoos And Aquariums, Ronald G. Oldfield, Patrick Bonano

Animal Sentience

Research on the behaviour of animals in zoos has been conducted for decades, and observations have provided information that has improved the psychological and social well-being of animals. However, research on fishes in zoos and aquariums seems to be lacking. Here, we assess the current state of research on fishes in zoos and aquariums by surveying the peer-reviewed literature. Our assessment differs from previous surveys in that we examine the taxonomic classes Chondrichthyes (sharks and rays) and Osteichthyes (bony fishes) separately. Our survey finds that bony fishes have been drastically underrepresented in zoo journals, more drastically than chondrichthyans, revealing an …

Feral Camel, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

No abstract provided.

Feral Donkey, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

Donkeys (Equus asinus) were first imported in substantial numbers to Australia in 1866 by Sir Thomas Elder. They were used as pack and draught animals in outlying areas of Western Australia (WA) until the 1930s. They were eventually replaced by the motor vehicle, and unwanted donkeys were released to the wild, where they became feral. The first record of feral donkeys is from the Kimberley in the early 1930s, but it is possible they became feral much earlier.

Blackbird, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

The introduced common blackbird (Turdus merula) is a pest in eastern Australia. It damages commercial fruit crops and may compete with native birds. The species is prohibited in Western Australia and individuals found here are destroyed.

The Western Australian Organism List (WAOL) contains information on the area(s) in which this pest is declared and the control and keeping categories to which it has been assigned in Western Australia (WA). For more information, see our website at dpird.wa.gov.au.

Feral Goat, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

The goat (Capra hircus) was one of the first animals to be domesticated, 8 to 10 thousand years ago. Archaeological work indicates the earliest attempts at domestication were in dry hills surrounding the Mediterranean basin. The ability of goats to utilise the coarse browse of mountainous areas made them suitable for domestication, in preference to sheep. With large-scale domestication of goats throughout the world, goats escaped and established feral goat herds on most continents. Overgrazing by goats has caused severe environmental damage, worldwide.

Goats arrived in Australia with the first fleet. They were introduced to many areas by early settlers …

Trophic Niche Of A Nonnative Invader And Environmental Drivers Of Its Increasing Populations In The Coastal Everglades, Grace Kahmann, Jennifer S. Rehage, Jordan A. Massie, James A. Nelson, Rolando O. Santos, Natasha M. Viadero, W. Ryan James, Ross E. Boucek, Derek P. Crane, Ryan J. Rezek

Marine Science

The Florida Everglades is a critically important, but highly threatened ecosystem that is becoming increasingly susceptible to the invasion of non-native species. This study investigated the ecological role of the invasive peacock eel (Macrognathus siamensis) within this ecosystem using 15 years of electrofishing data and stable isotope analysis. We investigated the population trends of peacock eels at the marsh-mangrove ecotone of the Shark River Estuary, the environmental factors contributing to their abundance, and the potential interactions they may have with native fish assemblages and coastal food webs. We used stable isotope analysis to provide insights into the basal resource contribution …

A New Invasive Lepidosaphes Armored Scale (Hemiptera: Coccomorpha: Diaspididae) For Florida: First Records, Natural Enemies, And An Identification Key, Erin C. Powell, Mark Zenoble, Douglass R. Miller, Benjamin B. Normark, Gregory A. Evans

Insecta Mundi

The invasive armored scale, Lepidosaphes laterochitinosa Green 1925 (Hemiptera: Coccomorpha: Diaspididae), was found in the Florida landscape for the first time in November 2022 and is now known from two south Florida counties: Broward and Miami-Dade. In Florida thus far, this polyphagous species has been found on Epipremnum pinnatum (L.) Engl. (Araceae), Dracaena Vand. ex. L. (Asparagaceae), and Breynia disticha J. R. Forst. and G. Forst. (Phyllanthaceae), all common landscape ornamentals. New parasitoid host records are provided for Encarsia lounsburyi (Berlese and Paoli), Encarsia citrina (Craw), and Aphytis lingnanensis Compere (Hymenoptera: Aphelinidae) that emerged from L. laterochitinosa in Broward …

Effects Of Microplastic Biofilms On An Anthropogenically Impacted Suburban Lake, Paris M. Velasquez

Masters Theses

Plastics have been observed in every location on the planet, and their prevalence in the environment is due in part to their strong resistance to degradation. Inland lakes are susceptible to plastic pollution by highway runoff, which contains plastic fragments of brake pads, car tires, litter, and road paint. These plastics eventually enter freshwater environments and degrade into microplastics (

Insights Into Past Extreme Environments Through Ancient Biomolecules, Ioana Nicoleta Meleg, Magdalena Năpăruş-Aljancic, Yuichi Naito, Hervé Bocherens, Axel Barlow

FRONTIERS UNBOUND: Exploring Extreme Environments

No abstract provided.

Assessing Prevalence Of Blood Parasites And Ranaviruses In Hong Kong Freshwater Turtles, Julia Leung

Lingnan Theses (MPhil & PhD)

Blood parasites and ranaviruses are pathogens that impact freshwater turtles worldwide. Given that native turtle species in Hong Kong are already at a high risk of extinction, their survival becomes even more threatened in the event of a disease outbreak. However, prevalence of these pathogens among the native population in Hong Kong remains unstudied.

In this study, I aim to (1) obtain baseline prevalence data of blood parasites and ranaviruses in Hong Kong freshwater turtles, (2) compare different methods for detecting blood parasites and ranaviruses, (3) evaluate the applicability of using blood parasites as a wildlife forensic tool, assess and …

Invasive Species Common Names: Working Towards More Inclusive Invasive Species Education And Outreach, Megan M. Weber, Angela Gupta, Nicholas B.D. Phelps, Douglas A. Jensen, Robert C. Venette

Journal of Extension

Invasive species harm natural and managed ecosystems. Awareness and management of these species depends on effective education and outreach. Traditional common names, including those with geographic references, for many invasive pests may perpetuate slanderous terms or stigmatize people from that place. To create more inclusive invasive species educational materials, the University of Minnesota Extension’s Invasive Species Community of Practice developed guidelines for selection of common names. Suggested names were shared with others involved in invasive species communications, leading to broader adoption. These guidelines may be useful to others who struggle to find descriptive, non-alienating common names for invasive species.

First Record Of The Diamond-Backed Watersnake (Nerodia Rhombifer) In Nebraska, Joseph W. Paysen, Keith Geluso, Daniel D. Fogell

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The diamond-backed Watersnake (Nerodia rhombifer) is a fairly large-bodied (≤2100g), semi-aquatic snake associated with wetlands throughout the south-central United States. Distribution of this species closely aligns with river floodplains in parts of its distribution, including the Missouri River floodplain as far north as Holt County, Missouri. Herein, we report on the first record of the Diamond-backed Watersnake in Nebraska. On May 21, 2011, Daniel D. Fogell collected a juvenile Diamond-backed Watersnake in southeastern Richardson County representing the first occurrence of the species in the state, which is adjacent to Holt County, Missouri. In extreme southeastern Nebraska, the distribution of this …

Pilbara Demersal Scalefish Resource Recovery Plan 2023- 2043 (Phase 1), Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

The Pilbara Demersal Scalefish Resource (PDSR) includes over 60 demersal scalefish species. The resource is accessed by the Pilbara Trap Managed Fishery, Pilbara Fish Trawl (Interim) Managed Fishery, and the Pilbara Line Fishery (PTMF, PFTIMF & PLF respectively) as well as the recreational and charter fisheries.

The PDSR is managed in accordance with the North Coast Demersal Scalefish Resource Harvest Strategy (Harvest Strategy). The sustainability objectives of the PDSR are set out in the Harvest Strategy and monitored via the use of an indicator species approach, whereby the status of key species is considered representative of the status of the …

Biogeography Of Mentzelia Thompsonii And Related Species (Loasaceae)., Joshua M. Brokaw, Gracie M. Granados, Logan A. Browning, Katie E. Howe, Rebecca L. Hunter, Larry Hufford

Biology

Mentzelia thompsonii is the only species in Mentzelia section Trachyphytum endemic to the Colorado Plateau and one of only a few that do not occur in California. In order to investigate the geographic origins, ecological function, and evolutionary potential of M. thompsonii and related species, we combine evidence from DNA, soil chemistry, and environmental niche modeling in a phylogenetic context. Based on ndhF–rpl32 cpDNA sequences from 185 specimens of M. thompsonii and 42 specimens representing the remaining 21 species in section Trachyphytum, we found that M. thompsonii is monophyletic and phylogenetically isolated from other species in Trachyphytum, suggesting …

Root Lesion And Burrowing Nematodes And Their Management, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Nematodes are common soil pests that feed on the roots of a wide range of crops in all agricultural areas of Western Australia, resulting in significant crop yield loss. Root lesion nematode can be managed but not eradicated.

This factsheet summarises the biology of the root lesion nematode (RLN, Pratylenchus spp.) and burrowing nematode (Radopholus spp.) species that damage Western Australian (WA) crops, and their diagnosis and management.

Correcting The Record: Subspecific Identification Of Nebraska’S Lone Common Eider (Somateria Mollissima), Sam Manning, Joel G. Jorgensen, Stephen J. Brenner, W. Ross Silcock

Nebraska Bird Review

In late November or early December 1967, Roger Guenther harvested a Common Eider (Somateria mollissima) on Maloney Canal between Maloney and Sutherland in Lincoln County, Nebraska. The head and a single foot from the carcass were deposited at the University of Nebraska State Museum via the University of Nebraska–Lincoln and the Nebraska Fish and Game Department (now the Game and Parks Commission). Dr. Jean Tate prepared the parts, which were inventoried as specimen #ZM-12341 in the UNSM. Dr. Paul Johnsgard purportedly took this specimen to the Field Museum of Natural History in Chicago for identification purposes, and concluded …

2023 (35th) Report Of The Nou Records Committee, Mark A. Brogie

Nebraska Bird Review

The functions and methods of the Nebraska Ornithologists’ Union Records Committee (NOURC) are described in its bylaws (NOURC 2010). The committee’s purpose is to provide a procedure for documenting unusual bird sightings and to establish a list of all documented birds for Nebraska. Species for which the NOURC seeks documentation (NOURC Review List) can be found at the NOU website https://noubirds.org/Birds/ReviewList.aspx. Starting in 2020, the NOURC decided to deal mainly with those species deemed as Accidental on the “Official List of the Birds of Nebraska”. Casual species and out-of- range species are now summarized in the “Seasonal Reports” of the …

The Nebraska Bird Review (September 2024) 92(3), Whole Issue

Nebraska Bird Review

Summer Field Report, June–July 2024, by W. Ross Silcock

Correcting the Record: Subspecific Identification of Nebraska’s Lone Common Eider (Somateria mollissima), by Sam Manning, Joel G. Jorgensen, Stephen J. Brenner, and W. Ross Silcock

2023 (35th) Report of the NOU Records Committee, by Mark A. Brogie

Subscription and Organization Information

Summer Field Report, June–July 2024, W. Ross Silcock

Nebraska Bird Review

This was an intriguing summer in several ways. I am far from being a knowledgeable ecologist, but, like most of us, as a layman I wonder whether and how weather affects birds, and if and how local weather is reflecting the conventional wisdom of climate change. Climate change seems increasingly to be expressed as various extreme or rapidly changing weather events that have differing effects on vegetation and consequently insect and larger prey populations. Every species responds differently it seems, depending on its biological needs, but food supply is the most important issue for birds. It is tempting to assign …

Louisiana Graduate Network In Applied Evolution (Lagniappe): 2023-2024 End-Year Report, Kristina Little, Samuel B. Robison, Bret Blackmon, Andrew R. Burns

Reports

The Louisiana Graduate Network in Applied Evolution (hereinafter; LAGNiAppE) was funded by a grant awarded through the National Science Foundation (NSF 22-506), as part of the Research and Mentoring for Postbaccalaureates in Biological Sciences (RaMP) grant program. The LAGNiAppE program provides training and mentorship to cohorts of recent college graduates from underrepresented groups interested in advancing their knowledge and research skills in evolutionary biology. Social Research and Evaluation Center (SREC) at Louisiana State University conducted the evaluation of LAGNiAppE, assessing program implementation and impact. The evaluation team at SREC employed a mixed methods design that included online surveys for scholars …

Variability In Associations Among Seabirds And Marine Mammals: Causes And Consequences, Samantha A. Monier

Dissertations, Theses, and Capstone Projects

Marine predators today face multifaceted stressors from changing climate to changing prey availability, and these changes are occurring at unprecedented speeds. Any alteration to a species’ environment has the potential to disrupt social networks and thus, how animals obtain and transfer information. Interspecific social interactions in the form of local enhancement and facilitation are a critical, but not yet well-understood, component of seabird foraging; of immediate concern is that anthropogenic changes may be altering the quantity and quality of positive species interactions, with consequences for the species involved.

While we know these interactions are not immutable, less is known about …

Diverse Origins Of Near-Identical Antifreeze Proteins In Unrelated Fish Lineages Provide Insights Into Evolutionary Mechanisms Of New Gene Birth And Protein Sequence Convergence, Nathan Rives, Vinita Lamba, C.H. Christina Cheng, Xuan Zhuang

Biological Sciences Faculty Publications and Presentations

Determining the origins of novel genes and the mechanisms driving the emergence of new functions is challenging yet crucial for understanding evolutionary innovations. Recently evolved fish antifreeze proteins (AFPs) offer a unique opportunity to explore these processes, particularly the near-identical type I AFP (AFPI) found in four phylogenetically divergent fish taxa. This study tested the hypothesis of protein sequence convergence beyond functional convergence in three unrelated AFPI-bearing fish lineages. Through comprehensive comparative analyses of newly sequenced genomes of winter flounder and grubby sculpin, along with available high-quality genomes of cunner and 14 other related species, the study revealed that near-identical …

From Turf To Turf: Fungal Invasion Of Ascocoryne Turficola In A Northern Michigan Bog, Evan L. Coscarelli-Trott

All NMU Master's Theses

This is the first paper to report Ascocoryne turficola Boud. 1905 (Helotiales: Ascomycota) within the United States. It is an obligate bog fungus native to Europe and Siberia, where it is extremely rare across most of its range. A. turficola appeared at Lily Pond Bog in Marquette, Michigan (87.47º W, 46.59º N) in 2019, almost contemporaneous with anecdotal reports in Minnesota and Ontario. Since 2019, the Lily Pond population has exploded and become the dominant fungus in this bog but has yet to spread to similar bogs nearby. This species is adapted to long distance dispersal and carries the potential …

The Influence Of Environmental Change On Genetic Diversity Across Spatial And Taxonomic Scales, Connor M. French

Dissertations, Theses, and Capstone Projects

The spatial distribution of genetic diversity is of interest to biodiversity scientists and conservationists and is a fundamental metric of biodiversity. Genetic diversity patterns across spatial and taxonomic scales contain information about population and assemblage dynamics that can convey their resilience to environmental change. Ectotherms are especially linked to their environments and may be especially sensitive to fluctuations in the environment over time. Herein, I investigate global and regional patterns of genetic diversity in two groups of ectotherms, insects and lizards, to understand the relationship between environmental change and genetic diversity, from populations to assemblages. Overall, my research aims to …

The Potential For Automated Insect Classification Using Infrared Remote Sensing, Rachel Deahl

Theses

Insects play an important role within ecosystems, occupying almost all trophic levels and providing crucial services such as pollination and decomposition. In addition, they can directly and negatively impact humans as crop pests, parasites, and disease vectors. Thus, it is essential to understand the spatial and temporal dynamics of insect populations and communities. Various forms of remote sensing, such as LiDAR, have been used to capture data on insects but often are costly and require advanced expertise. The objective of this thesis is to evaluate a cost-effective methodology that balances information loss. This thesis aims to outline the discrimination required …