Digital Commons Network^™

Deep Learning-Based Quantification Of Tall Fescue Abundance In Pastures, Rose E. Binkley, Samuel R. Revolinski, Echo Elizabeth Gotsick, Ray Smith, Zeya Wang, Katsutoshi Mizuta

Plant and Soil Sciences Faculty Publications

Accurate and rapid measurement of tall fescue abundance is essential for efficient forage management and mitigating livestock exposure to potential endophyte-related toxicity. Traditional visual estimation methods are labor-intensive and are subject to change depending on the observer doing the calculations, which limits their scalability and consistency. This study explores the application of deep learning techniques to automate and improve the classification of tall fescue abundance across pasture systems in Kentucky. Ground-truth abundance classes were evaluated using one of the traditional methods with occupancy grid and compared against estimates derived from red-green-blue images. Two convolutional neural network architectures, YouOnlyLookOnce (YOLO) and …

Exploring Mesoproterozoic Marine Redox States In A Young Banded Iron Formation From The Needle Mountains, Jaya Sharma, Brenhin Keller

Wetterhahn Science Symposium Posters

Banded iron formations (BIF), as redox-dependent chemical sedimentary rocks, have served as proxies for marine and atmospheric oxygen and iron conditions throughout Earth history. While abundant in the Archean and early Proterozoic, the widespread deposition of BIFs declined following the Great Oxidation Event, as oxygenated surface waters prevented the accumulation of ferrous iron. However, the Needle Mountains, located in southwestern Colorado, houses an anomalously young BIFs deposited between 1.786±10 - 1.801±6 Ga given existing geochronology. Here, we use rare earth element (REE) systematics, bulk chemistry, and petrographic analysis to determine the depositional conditions under which this BIF was formed. We …

Carbon Storage In Headwaters Can Respond Rapidly To Climate Change, Maddie Benello, Carl Renshaw, Joshua Landis

Wetterhahn Science Symposium Posters

Headwater streams play a critical role in the global carbon cycle, serving as significant sites of carbon storage. While there have been recent efforts to quantify carbon storage in headwater streams in the western United States, there remains limited understanding of both the volume and timescale of carbon storage in northeastern forests which often have extensive logging and agricultural histories. Here, we quantify the carbon stock, residence time, and flux of a zero-to-first order headwater stream in Charles Downer State Forest (DF), VT using novel fallout radionuclide (FRN) chronometry. We find DF headwaters have a carbon stock of 66.2 Mg …

Timing, Orbital Pacing, And Provenance Of Late Paleogene Loess In The Western United States, Xiangwei Guo

Earth & Environmental Sciences Dissertations - Archive

This project examines the timing of loess emergence, the nature of the fluvial–eolian transition, orbital forcing on dust accumulation, and sediment recycling in the late Paleogene White River Formation (Group) of Wyoming and Nebraska, western United States. By integrating traditional sedimentology with machine learning–enhanced grain-size analysis, this research shows that loess accumulation at Flagstaff Rim in central Wyoming began during active fluvial deposition at approximately 35.8 Ma, indicating a gradual transition from fluvial to eolian conditions. Machine learning complements field sedimentology and granulometric interpretation while enabling the development of new, testable hypotheses. Extending this framework eastward to Toadstool Geologic Park …

Effect Of Ionic Strength On Gelation Time And Strength Of Amps-Based Polymer Gels, Maryam Sharifi Paroushi, Xuyang Tian, Baojun Bai, Thomas P. Schuman, Yin Zhang, Mingzhen Wei

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

Polymer gel treatment has been widely applied for improving sweep efficiency and controlling excessive water and gas production. Their performance depends on gelation time and final gel strength. In most studies, brine salinity is used to describe the effect of formation water on gel behavior. However, changing salinity also changes ionic strength and ion composition at the same time. Because of this coupling, it is difficult to identify the mechanisms controlling gelation, which has led to inconsistent trends in the literature. Increasing salinity has been reported to either slow or accelerate gelation and to weaken or strengthen gels depending on …

Coupling Liquid Chromatography To Orbitrap Isotope Ratio Mass Spectrometry: Overcoming Isotope Effects Of Chromatography And Amount-Dependency By Peak Homogenization, Aoife Canavan, Leonhard Prechtl, Habib Al-Ghoul, Nils Kuhlbusch, Andrea M. Erhardt, Martin Elsner

Earth and Environmental Sciences Faculty Publications

Electrospray ionization Orbitrap mass spectrometry (ESI-Orbitrap-MS) has recently proven to be a powerful tool for compound- and position-specific stable isotope analysis, targeting isotopologues of multiple elements (H, C, N, O, S) in polar analytes. However, studies have so far mainly focused on pure analyte solutions via direct infusion. Here, we present the online coupling of liquid chromatography (LC) to ESI-Orbitrap-MS for stable isotope analysis of sulfamethoxazole (SMX), a synthetic antimicrobial, used as a model compound. Our study explored the fidelity of isotope values with two strategies for capturing and broadening chromatographic peaks after LC. When capturing the target analyte in …

Geoscience Mathematics Self-Efficacy Scale (Geomses) For Majors-Level Undergraduates: Psychometric Data, Michael Coe, Rory Mcfadden, Beth Pratt-Sitaula, Eric Baer

Science Education Resource Center (SERC)

Self-efficacy is often investigated as a key attitudinal component of academic persistence and performance, and self-efficacy surveys can serve in research models as efficient and non-threatening assessment tools to augment or substitute for achievement or performance measures. The Geoscience Mathematics Self-Efficacy Scale (GeoMSES) builds on prior work in measurement of self-efficacy for mathematics by focusing specifically on students’ capacity to apply mathematical skills to typical problems encountered in majors-level undergraduate geoscience courses or in professional geoscience settings. The scale was developed as part of program evaluation research for a set of learning modules designed to augment existing geoscience curricula. In …

Micronutrients (Trace Elements) For High Rainfall Pastures In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

Micronutrient deficiencies can result from removal of agricultural products over many years, changes in soil acidity, or from large increases in plant biomass production and export. This page is specific to high rainfall pastures (more than 600mm average annual rainfall) in the south-west of Western Australia.

The Department of Primary Industries and Regional Development recommends tissue testing to check plant micronutrient nutrient needs.

Potassium For High Rainfall Pastures In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

Potassium (K) deficiency can lead to a decline in clover content and severely limit pasture productivity in high rainfall pastures. Large amounts of potassium can be lost each year through leaching and removal of potassium in hay or silage.

This information is specific to high rainfall pastures receiving more than 600mm average annual rainfall in the south-west of Western Australia.

Soil Sampling High Rainfall Pastures In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

Soil sampling and testing is an essential part of making good fertiliser decisions. Fertilisers are a large cost to farming pastures in high rainfall areas. This page is specific to sampling high rainfall pastures (more than 600mm average annual rainfall) in the south-west of Western Australia.

The Department of Primary Industries and Regional Development recommends soil sampling and testing as part of a plant nutrient management program.

Sulfur For High Rainfall Pastures In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

Sulfur deficiency can substantially reduce pasture yield on sandy soils, particularly in wet years where the sulfate form of sulfur leaches below the root zone of pasture plants, making it unavailable.

This information applies specifically to high rainfall pastures (over 600mm average annual rainfall) in the south-west of Western Australia.

The Department of Primary Industries and Regional Development recommends basing fertiliser decisions on good evidence (soil and tissue test results)

Tissue Sampling And Analysis For High Rainfall Pastures In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

Tissue testing helps identify nutrient deficiencies that impact plant health. In high rainfall areas ( > 600 mm), pastures are highly productive and have greater demand for both macro- and micronutrients. Micronutrient status is best assessed through plant tissue, as soil levels are difficult to measure accurately.

The Department of Primary Industries and Regional Development recommends tissue testing to assess the effectiveness of fertiliser and soil testing programs, and diagnose emerging macronutrient and micronutrient deficiencies that could cause production losses.

Environmental Impact Of Nitrogen And Phosphorus Fertilisers In High Rainfall Pasture Areas Of Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Natural resources factsheets

The most commonly used nitrogen and phosphorus fertilisers in the high rainfall (>600mm annual average) south-west of Western Australia can be leached into the groundwater and washed into waterways, resulting in serious environmental and economic damage.

The Department of Primary Industries and Regional Development recommends regular soil testing and consultation with FertCare-accredited advisers to reduce leaching losses and increase profit from added nutrients.

A Stable Isotope Comparison Of The Biogenic Carbonate Of Mammalian Tooth Enamel From The Modern Ohio River Valley And Fort Ancient Buffalo Sites, Sara Elizabeth Slack

Theses, Dissertations and Capstones

δ¹⁸O and δ¹³C values change in response to anthropogenic factors (Ghosh & Brand, 2003). Little is known about the effects of anthropogenic climate and land use change on the ecology of the Ohio River Valley. The goal of this research was to quantify the effects of European colonization on the native ecology of the region. The specific questions of this research were: (1) How have mammalian tooth enamel δ¹⁸O and δ¹³C compositions shifted over time within the Ohio River Valley in response to anthropogenic climate change and vegetation? (2) Are there differences …

Empirical-Based Model Of Spatio-Temporal Errors, Godwin Naaba Ndaa

Masters Theses

This research develops an empirical model to characterize spatial-temporal InSAR errors and improve the accuracy of deformation time-series analysis. Using standardized Sentinel-1 HyP3 products and MintPy, the study quantifies how correlated noise affects velocity precision and validates the results against continuous GNSS velocities.

Residual velocities are near-Gaussian, with σ ~0.92–2.04 cm/yr and ~1 cm/yr on average. Variograms show power-law spatial structure with a non-zero nugget implicating troposphere and decorrelation while errors drop exponentially with more acquisitions; spatial uncertainty is strongly affected by unwrapping errors, coherence, and tropospheric noise, not simply troposphere.

A comparative assessment of on-demand cloud processing with other …

Nebraska Statewide Groundwater-Level Monitoring Report 2025, Aaron R. Young, Mark E. Burbach, Sue Olafsen Lackey, Robert Matthew Joeckel, Jeffrey Westrop

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Evaluation Of Chromium-Crosslinked Amps-Hpam Copolymer Gels: Effects Of Key Parameters On Gelation Time And Strength, Maryam Sharifi Paroushi, Baojun Bai, Thomas P. Schuman, Yin Zhang, Mingzhen Wei

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

Controlling CO₂ channeling in heterogeneous reservoirs remains a major challenge for both enhanced oil recovery (EOR) and secure geological storage. AMPS-HPAM copolymers exhibit high-temperature resistance and brine tolerance compared with conventional HPAM gels, making them well suited for the harsh environments associated with CO₂ injection. Chromium-based crosslinkers (CrAc and CrCl₃) were investigated because sulfonic acid groups in AMPS can coordinate with trivalent chromium ions, enabling dual ionic crosslinking and the formation of a robust gel network. While organic crosslinked AMPS-HPAM gels have been widely studied, the behavior of chromium-crosslinked AMPS-containing systems, particularly their gelation kinetics under …

Solubility And Dissolution Mechanism Of Novel Multi-Ester Headgroup Surfactants In Supercritical Co2, Ning Xu, Yan Ling Wang, Baojun Bai, Shi Zhang Cui, Yu Zhang, Wen Jing Shi, Zhao Nian Zhang, Wen Hui Ding, Pei Xu Ma, Zan Gao

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

To address the limited solubility and applicability of conventional hydrocarbon surfactants in supercritical CO₂, a series of multi-ester headgroup surfactants were designed and synthesized by leveraging the CO₂-philic properties of ester groups. The molecular structures were characterized using Fourier transform infrared (FT-IR) spectroscopy and ¹H NMR. A custom-designed laser-based apparatus was developed to quantify surfactant solubility and systematically investigate phase behavior in CO2. Molecular dynamics (MD) simulations were employed to elucidate structure–solubility relationships across multiple scales, including solubility parameters, interaction energies, radial distribution functions (RDFs), and free volume fractions. Results indicate that, at 323.15 K, …

Evaluation Of A Novel Re-Crosslinkable Preformed Particle Gel For Conformance Control In Ultra-High Temperature Reservoirs, Yanbo Liu, Tao Song, Caleb Kwasi Darko, Thomas P. Schuman, Mingzhen Wei, Baojun Bai

Chemistry Faculty Research & Creative Works

Preferential fluid flow remains a major challenge in subsurface energy production and gas storage operations, resulting in excessive water production in mature oil fields, reduced heat extraction in geothermal reservoirs, and low sweep and storage efficiency in CO₂-EOR projects. Polymer gels are widely used to mitigate high-permeability channels; however, conventional systems exhibit limited plugging efficiency and short lifetimes in ultra-high-temperature reservoirs due to poor thermal stability. This study presents a novel ultra-high-temperature-resistant preformed particle gel (UHT-PPG) developed for conformance control in reservoirs with temperatures of 150–275 °C and severe super-K or channeling problems. The material was evaluated in …

Geochemical And Petrological Observations Of The June Lake Basalt, Eastern California, Daniel Jacob Abel

Cal Poly Humboldt theses and projects

The June Lake basalt is a monogenetic cinder cone and 11-km-long lava flow in eastern California located ~10 km NW of the Long Valley caldera. The stratigraphic position of the June Lake basalt between Tahoe and Tioga glacial deposits suggests an eruption age of only ~20-45ka. This age places the June Lake Basalt among the youngest volcanic eruptions in the Long Valley-Mono Basin region, where volcanic activity spans from the late Pliocene to the Holocene. The goal of this study is to use field observations coupled with whole-rock and crystal geochemical analyses to investigate the magma source and pre-eruption magma …

Early Successional Response To Stream Daylighting In Redwood National And State Parks, Orick, California, Rylee Rawson

Cal Poly Humboldt theses and projects

In-channel stream restoration projects can act as both disturbance and recovery mechanisms, disrupting existing conditions to reestablish the hydrologic and ecological processes that sustain stream ecosystems. These interventions initiate successional trajectories in which channel form and biological communities reorganize over time. In Redwood National and State Parks (California, USA), the Redwoods Rising initiative restores buried headwater channels by recontouring legacy logging roads and daylighting streams buried by Humboldt crossings. Using the National Park Service Klamath Network wadable stream monitoring protocol, I evaluated nine restored reaches spanning one to five years post-restoration, alongside old-growth reference reaches and available pre-treatment data. I …

Depth And Soil Physical Context Govern Soil Organic Carbon, While Woody Cover Moderates Native Vegetation Relationships In California Rangelands, Dabid Zuniga Garcia

Cal Poly Humboldt theses and projects

Soil organic carbon (SOC) is central to soil function and an important component of climate mitigation in rangeland ecosystems, but the controls on SOC across California’s working rangelands remain understudied. Using data from Point Blue Conservation Science’s Rangeland Monitoring Network, this study evaluated how soil properties, vegetation structure, and recent climate relate to SOC concentration at depths of 0–10 cm and 10–40 cm across 145 ranches spanning four California regions. Linear mixed-effects models showed that SOC was consistently higher in topsoil than subsoil and highest in coastal sites relative to interior valleys. Bulk density was the strongest negative predictor of …

Metamorphosed Components In Cv Chondrites Camel Donga 003 And Camel Donga 040 As Evidence For Varying Degrees Of Metamorphism Within The Parent Body, Kathryn E. Stone

Honors Theses

The CV carbonaceous chondrites are a group of primitive stony meteorites that record early solar-system evolution processes. They are typically of low metamorphic grade, though some metamorphosed CVs have recently been found. Two CV chondrite breccias, Camel Donga 003 (CD 003) and Camel Donga 040 (CD 040) consist of multiple lithologies. CD 003 consists of three lithologies, one of which – Lithology C – has been metamorphosed to petrologic type ~3.7 (Alevy et al. 2025). CD 040 consists of two lithologies, one of which is metamorphosed to petrologic type 3.7 (Dunn and Alevy, 2024; Dunn et al. unpublished). Both samples …

Efficient Preservation Of Old Methane-Derived Organic Carbon In Deep-Sea Surface Sediments, Rui Bao, Yangli Che, Mingzhi Liu, Naiyu Zhang, Yang Zhou, Lihua Dong, Shen Li, Owen A. Sherwood, Min Yu, Zongheng Chen, Shengxiong Yang, Nan Wang, Longhai Zhu, Jiawang Chen, Mutai Bao, Haoshuai Li, Luonan Chen, Weifeng Wu, Haiyue Ma, David J. Burdige

OES Faculty Publications

Methane released from the subseafloor is significantly attenuated during upward migration, yet the preservation of methane-derived organic carbon (OC) in global deep-sea sediments remains poorly understood. Here, we measured carbon isotopes coupled with temperature-ramped analyses on various methane seepage sediments. Our results reveal a correlation between the radiocarbon (¹⁴)C) content in deep-sea surface sediments and sulfate-methane transition depth. Notably, our findings suggest that a substantial amount of (¹⁴)C-depleted OC may originate from deep-seated methane and is efficiently preserved in surface seepage sediments. We propose that the efficient OC preservation is related to microbial-mediated aggregate formation at the seawater-sediment interface, where …

A Tale Of Two Microbialities: Stromatolites And Microbially Induced Sedimentary Structures, Nora Noffke, Stanley M. Awramik

OES Faculty Publications

Microbialites are biosedimentary structures built by microbial mats. Five microbialite groups are distinguished: stromatolites, thrombolites, dendrolites, leiloites and microbially induced sedimentary structures (MISS). This contribution discusses the two most abundant microbialite groups in marine settings, stromatolites and MISS. Microbial interactions with clastic sediment are very similar in both stromatolite and MISS formation. However, in stromatolites, syngenetic carbonate production caused by photoautotrophic and heterotrophic metabolisms and by calcimicrobes also takes place. More so, carbonate may precipitate within the extracellular polymeric substances. Due to the various carbonate forming processes as well as recrystallisation, the microscopic mat fabrics within stromatolite laminae are rarely …

Seasonal And Geologic Controls On Submarine Groundwater Discharge-Derived Nutrient Fluxes To Two Coastal Embayments, Moira Taylor, Joseph J. Tamborski, Aaron Alorda-Kleinglass, Nathaniel Maynard

OES Faculty Publications

Submarine groundwater discharge and porewater exchange are critical but often overlooked sources of nutrients to coastal systems. This study investigates how sediment permeability and summer-winter seasonal dynamics influence the magnitude and biogeochemistry of nutrient fluxes from submarine groundwater discharge and porewater exchange. Reaction rates in the subterranean estuary were used to identify the transformations and drivers of nutrient loading in two geologically distinct embayments in the U.S. East Coast: the highly permeable Peconic Bay estuary (NY), and the surficially fine-grained coastal embayments of the southern Delmarva Peninsula (VA). We applied radium isotope mass balances to distinguish total submarine groundwater discharge …

Diatom Community Response To High And Low Iron Upwelling Plumes In The California Current System, Sveinn V. Einarsson, Kimberly Powell, Claire Till, Tyler Coale, P. Dreux Chappell

OES Faculty Publications

Diatoms are important primary producers, accounting for most of the oceanic production and carbon export relative to other photosynthetic eukaryotes. There are important differences among diatom species that enable them to proliferate in different environments. Some have nutrient storage capabilities or lower nutrient quotas suited for oligotrophic oceans. Bloom-forming diatoms are typically found in nutrient-rich coastal waters where they respond quickly to nutrient pulses and can influence biogeochemical cycling in the ocean after blooms. As many physiological differences affect biomass and export, it is important to better understand how physical and chemical parameters influence diatom community composition, especially in dynamic …

Testing The Limits Of Provenance Analysis From Basaltic Fluvial Sediment Near Sandvatn, Iceland, As A Mars Analog, Audrey R. Putnam, Kirsten L. Siebach, Michael T. Thorpe, Valerie M. Tu, Elizabeth B. Rampe, Candice C. Bedford, Gelu Costin, Joseph J. Tamborski

OES Faculty Publications

Detrital sediments that accumulate downstream and are preserved in sedimentary rocks can allow characterization of geologic formations that are inaccessible for spatial or temporal reasons. However, mixing, sorting, and alteration of sediment during transport may complicate reconstruction of protolith characteristics. We test the preservation of three key provenance signals in coarse fluvial sand at a Mars analog watershed in Iceland to determine whether detrital sediments capture (a) watershed magmatic chemical variation, (b) textural indicators of lava-water interaction during eruption and cooling, and (c) hydrothermal alteration. Specifically, we tested whether diagnostic variations in rock mineralogy, chemistry, and texture can be recovered …

Characterizing The Unique Chemical Imprint Of On-Axis, Lower-Temperature Hydrothermal Flow To The Deep Ocean (Southern East Pacific Rise, 16.5°-18.0°S), Laura E. Moore, Randelle M. Bundy, Joseph A. Resing, Scott White, Tamara Baumberger, Peter N. Sedwick, Nathaniel J. Buck, Anson M. Antriasian, Isaac Keohane, Bettina M. Sohst, Sharon L. Walker, Christopher R. German

OES Faculty Publications

In addition to high-temperature vents, lower-temperature flow (LTF) (< 300°C) is abundant along mid-ocean ridges and contributes globally-important fluxes of heat and water along with largely-unconstrained geochemical influences on the ocean. We examined the impact of on-axis LTF on the chemical composition of the overlying water column (< 40 m above seafloor) along the 16.5°-18.0°S sector of the ultrafast-spreading southern East Pacific Rise using autonomous underwater vehicle Sentry surveys and conductivity-temperature-depth rosette casts. LTF sites were typically spatially isolated from high-temperature systems and imparted unique chemical signatures to the overlying ocean. Water column samples impacted by LTF exhibited low particulate iron:sulfur ratios and high methane: total-dissolvable manganese ratios, whereas samples influenced by high-temperature venting exhibited opposite trends. We confirmed that LTF imparts a distinct and measurable chemical signature to the water column, independent from high-temperature vents. Isolated, on-axis LTF will be important to consider when assessing hydrothermal circulation impacts upon ocean biogeochemistry.

Autonomous Float Data Reveal Decoupled Trends In Chlorophyll And Stratification In The Indian Ocean, Marufa Ishaque, Sophie Clayton, John Klinck

OES Faculty Publications

Recent studies have shown that the Indian Ocean is warming significantly, but how this warming impacts primary production is largely unresolved due to a relative lack of depth-resolved biological observations. In this study, we have used Biogeochemical-Argo data from 2013 to 2022, comprising over 9,000 individual profiles, to examine regional patterns and trends in depth-integrated chlorophyll, depth-integrated net primary production and stratification in the northern and Equatorial Indian Ocean. Our analysis shows that water column stratification is increasing in the majority of the study area, with the highest rate of increase observed in the western Bay of Bengal. At the …