Digital Commons Network^™

Single-Valued Neutrosophic Pessimistic Multi-Granulation Rough Set Model Based On (A,B,C)-Cut Relations And Its Applications, Xu-Xi Wu, Hu Zhao, Qiao-Ling Song, Xiong-Wei Zhang

Neutrosophic Systems with Applications

To address uncertainty in multi-source data, this paper proposes a single-valued neutrosophic pessimistic multi-granulation rough set (P-SVN-MGRS) model based on (a,b,c)-cut relations. In this framework, each neutrosophic relation is characterized by three membership-degree functions: T(x,y), I(x,y), and F(x,y). These functions correspond to truth-membership, indeterminacy, and falsity, respectively. The (α,β,γ)-cut relation employs parameters α,β,γ∈(0,1] as thresholds for the three functions. A pair (x,y) belongs to …

Analysis Of A Few Quantum Algorithms And Circuits Related To Boolean Functions, Suman Dutta

Doctoral Theses

Boolean functions are fundamental to computation and presently play a crucial role in quantum information processing. This thesis presents two facets of Boolean functions in the context of quantum computing: (I) extending and applying the theoretical framework of Forrelation to cryptographic analysis, and (II) designing efficient quantum circuits for multi-controlled Toffoli gates and Boolean circuit implementations. Given two Boolean functions $f$ and $g$, Forrelation, introduced by Aaronson (2010), measures the correlation between the truth table of $f$ and the Walsh-Hadamard transform of $g$ at the corresponding points. Here, we revisit the Forrelation framework to study several cryptographically significant spectra of …

Stylespade: Realistic Image Augmentation For Robust Infrastructure Crack Segmentation Via Ensemble Learning, Jaeung Sim, Menas Kafatos, Seung Hee Kim, Yangwon Lee

Institute for ECHO Articles and Research

The rapid deterioration of global infrastructure necessitates precise and automated crack detection technologies for proactive maintenance. However, deep learning-based segmentation models often suffer from a scarcity of diverse, high-quality labeled datasets. This study proposes StyleSPADE, a novel conditional image generation model that integrates semantic masks and style images to synthesize realistic crack data with diverse background textures while preserving precise geometric morphology. To validate the effectiveness of the generated data, we conducted extensive semantic segmentation tasks using Transformer-based (Mask2Former, Swin-UPerNet) and CNN-based (K-Net) models. Experimental results demonstrate that StyleSPADE-based augmentation significantly outperforms baseline models, achieving a Crack IoU of 0.6376 …

Developing Pattern Recognition And Interpretable Convolutional Neural Network Based Frameworks For Identifying Drug Resistant And Pan Cancer Mirnas From Expression Data, Joginder Jsingh

Doctoral Theses

Micro Ribonucleic Acids (miRNAs) are short length (∼24) non-coding RNAs and are considered as key biomarkers in cancer diagnosis and treatment. They play a vital role in classifying cancer patients from normal ones and drug resistant patients from control ones. The control patients are those who have not received any drug for cancer treatment. The objective is to identify a subset of miRNAs those help in the classification of the patients using expression data. The thesis is comprised of four contributory chapters in addition to an introduction and conclusion. In the first two contributory chapters, computational methods for ranking and …

Environmental Degradations In Images: Analysis, Restoration, And Applications, Harsh Bhandari

Doctoral Theses

This thesis investigates computational models and methodologies for restoring images degraded by challenging environmental conditions such as haze and underwater environments. It further explores the analysis and estimation of particulate matter (PM) concentration from both day and night scenes under varying weather conditions, using degraded visual data as a primary input. Each environment introduces distinct forms of visual degradation, making image restoration a critical challenge that directly impacts applications including visibility enhancement, weather analysis, particulate concentration estimation, and object detection. By addressing these challenges, this thesis aims to develop adaptable, data-driven solutions that enhance image clarity and improve information extraction …

Confluence, Vol. 4, Iss. 2, Full Issue

The Confluence

No abstract provided.

A Review Of Routing Attacks In Routing Protocol Over Low-Power And Lossy-Based Iot Networks, Lanka Chris Sejaphala Mr., Vusimuzi Malele Prof, Francis Lugayizi Prof.

Journal of Cybersecurity Education, Research and Practice

Low-power and Lossy IoT Networks (LLNs) comprise physical sensors, processing capability, power, and other technologies to exchange information between systems and devices over the internet. However, these networks are susceptible to routing attacks affecting resources, traffic flow, and topology formation. In the related work, it has been discovered that many previous studies do not consider algorithms and implementation approaches for routing attacks. This research study provides a comprehensive in-depth synthesis insight into the description, effects, and algorithms & implementation of four routing attacks in LLNs i.e., rank, sinkhole, DIS-flooding, and worst parent attacks. The findings of this research study highlight …

Densest Subgraph Discovery On The Cpu, Hunter Gerard Gareau

Theses and Dissertations

The Densest Subgraph Discovery (DSD) problem is a prevalent problem in the field of graph mining, aiming to find the cohesive subgraph. Given a graph �� = (��,��) and an integer �� ≥ 2, the goal is to find a vertex sub- set �� ⊆ �� whose induced subgraph �� (��) maximizes the ��-clique density, defined as the number of ��-cliques per vertex. Larger val- ues of �� capture higher-order connectivity patterns beyond edges, enabling the discovery of more cohesive structures. There have been many solutions to this problem. However, one avenue that other graph mining problems have gone down …

Reformulation Of The Protein Databank For Real-Time Search Of Geometrical Attributes Of Protein Structures, Musa Azeem, Christopher Lee, Aaron Hein, Christopher Ott, Homayoun Valafar

Faculty Publications

Introduction:

In this study, we introduce the design and implementation of PDBMine, a large-scale, queryable platform for mining sequence-structure statistics from the Protein Data Bank (PDB). PDBMine enables rapid analysis of local conformational trends across proteins by extracting dihedral angles and sequence patterns at scale. In addition to the design and implementation of PDBMine, we also present results validating its ability to return structurally meaningful information.

Methods:

We first assess the accuracy of its dihedral angle distributions by comparing them to established Ramachandran space and verifying expected behaviors of residues such as glycine and proline. We then use PDBMine to …

Wild@Fire2025: Overview Of Word-Level Code-Mixed Language Identification In Dravidian Languages, Ameeta Agrawal, Asha Hegde, Sharal Coelho, Sabur Butt, Fazlourrahman Balouchzahi, Sudha V, Shashirekha Hosahalli Lakshmaiah

Computer Science Faculty Publications and Presentations

Code-mixing is considered as a linguistic phenomenon that combines several languages into one text. It has now become very common in multilingual societies, especially in digital communication. Word-Level Identification of Languages in Dravidian Languages (WILD) - a Code-mixed Language Identification (CoLI) in Dravidian languages shared task, organized as a part of Forum for Information Retrieval and Evaluation (FIRE) 2025, put forward these challenges to the researchers by asking them to develop models capable of classifying words in code-mixed texts involving Dravidian languages - Tamil, Telugu, Malayalam, Kannada, and Tulu, which are interwoven with English. It poses significant challenges due to …

Jiving With Llms: Assessing First Year Students’ Computer Programming Self Efficacy After Reading Code With Llms, Michelle Jarvie-Eggart, Joseph Roy Teahen, Daniel T. Masker, Jose Padilla, Leo C. Ureel Ii, Laura E. Brown, Scott Pomerville, Jon Sticken

Michigan Tech Publications

This study investigated the impact of leveraging generative artificial intelligence (GenAI) to assist 1st-year engineering and computer science (CS) students in reading code in a new (to them) language. Students were asked to comment code in FORTRAN. They were then asked to run the code through ChatGPT-4.0 for its comments and reflect on what they learned from the experience. Participants completed survey items from Ramalingam and Wiedenbeck’s Computer Programming Self-Efficacy Scale (CPSES) prior to and after the intervention. Additional open-ended reflective (qualitative) questions were added to the quantitative questions in the postintervention questionnaire. This study documents increases in self-efficacy for …

Datamut: Deterministic Algorithms For Time-Delay Attack Detection In Multi-Hop Uav Networks, Keiwan Soltani, Federico Corò, Punyasha Chatterjee, Sajal K. Das

Computer Science Faculty Research & Creative Works

Unmanned Aerial Vehicles (UAVs), also known as drones, have gained popularity in various fields such as agriculture, emergency response, and search and rescue operations. UAV networks are susceptible to potential security threats, such as wormhole attacks, jamming, spoofing, and false data injection. Time-Delay Attack (TDA) is a unique attack in which malicious UAVs intentionally delay packet forwarding, posing significant threats, especially in time-sensitive applications. It is challenging to distinguish malicious delay from benign network delay due to the dynamic nature of UAV networks, intermittent wireless connectivity, or the Store-Carry-Forward (SCF) mechanism during multi-hop communication. Some existing works propose machine learning-based …

Optimizing Proaftn Classifier With Ant Colony Algorithm: Enhanced Diabetes Detection Benchmarking, Feras Al-Obeidat

All Works

The increasing global prevalence of diabetes highlights the need for accurate diagnostic tools to improve early detection and effective treatment planning. Traditional classification models often struggle to achieve optimal performance due to limitations in parameter tuning and adaptability to complex datasets. To address these limitations, this article introduces PROAnt, an innovative learning approach designed to enhance the robustness and efficiency of the PROAFTN multicriteria classification method. PROAnt leverages the computational power of ant colony optimization (ACO) to dynamically fine-tune and optimize the key parameters, such as intervals and weights, at the core of the PROAFTN classification process. This learning methodology …

Ai In Society: A Regulatory Framework For Responsible Integration, Ziad Doughan, Sari Itani, Hadi Al Mubasher

BAU Journal - Science and Technology

This review paper studies the influence of Artificial Intelligence (AI) and Machine Learning (ML) on society in various categories in detail. AI and ML have developed rapidly in the past two decades, thus changing our lifestyles. These developments have various positive and negative impacts on society. This paper explores the many societal impacts of AI and ML, in economics, social aspects, ethics, and policy, shedding light on the opportunities and challenges that arise. An interdisciplinary insight is capable of understanding the challenges society faces when it uses AI and ML, locking opportunities that lie ahead and identifying promising paths towards …

Aura: An Ai-Powered Multimodal Prototype For Adaptive Apraxia Of Speech Therapy And Communication Support, Omotayo Omoyemi, Rachel K. Johnson

Speech-Language Pathology Faculty Publications

Apraxia of Speech (AOS) is a motor speech disorder that significantly limits communication and requires intensive, long-term therapy. Access to consistent treatment is often constrained by shortages of speech-language pathologists, high costs, and limited opportunities for continuous monitoring outside clinical settings. Recent advances in Artificial Intelligence (AI) provide new opportunities to support scalable and personalized speech therapy.

This paper presents AURA (Adaptive Understanding and Relearning Assistant for Apraxia), a multimodal AI framework designed to support speech therapy, progress monitoring, and communication for individuals with AOS. The system integrates speech analysis, machine learning–based error detection, reinforcement learning for adaptive therapy, and …

An Examination Of Ethics When Using Chatgpt, Blake V. Ailes

CCAC Theses and Dissertations

With the general population’s recent and dramatic increase in the frequency of ChatGPT and other similar Artificial Intelligence Generated Content (AIGC) usage throughout various industries, gray areas are becoming more prominent regarding whether ChatGPT is considered to be ethical or unethical in certain situations. Examples of unethical use of ChatGPT include plagiarism, the use of inaccurate information in drawing conclusions, and the creation of malicious code that negatively impacts various companies. Not all of these ethical concerns are necessarily the fault of the user or the AIGC. To date, peer-reviewed research on the ethical usage of ChatGPT is limited, primarily …

Digital Redlining In The Smart City: Artificial Intelligence, Housing Law, And Structural Urban Inequality, Spurthi Nrusimhadevara

Undergraduate Scholarship and Creative Works

Artificial intelligence is increasingly used in urban housing systems, where it shapes decisions about tenant screening, rent pricing, lending, zoning, and neighborhood investment. Although these tools are often promoted as efficient and impartial, they frequently rely on historical data that reflect racial, economic, and spatial inequality. As a result, AI systems can reproduce discriminatory outcomes even when protected characteristics are not directly used. This paper examines digital redlining in the smart city and argues that algorithmic housing tools mirror long standing structural inequities that raise significant concerns under fair housing and civil rights law. It evaluates how automated screening, predictive …

Ai-Assisted Surface-Enhanced Raman Spectroscopy For Cardiovascular Diagnostics: From Plasmonic Materials To Clinical Translation, Anju Joshi, Gymama Slaughter

Center for Bioelectronics Publications

Raman spectroscopy (SERS) has emerged as a powerful analytical technique, offering molecular fingerprint specificity and ultrasensitive detection of cardiac biomarkers. Recent advances in plasmonic nanostructures, surface functionalization strategies, and flexible sensing platforms have significantly improved the analytical performance of SERS-based biosensors. In parallel, the integration of artificial intelligence (AI) and machine learning has enabled robust interpretation of complex spectral datasets, facilitating automated biomarker classification and improved diagnostic accuracy in heterogeneous biological environments. Despite these advances, the field remains fragmented, with limited integration between nanomaterial design, biomarker selection, and data-driven analysis, and persistent challenges related to reproducibility, standardization, and clinical validation. …

Deep Learning For Eeg-Based Emotion Recognition With Temporal And Spectral Interpretability, Shruti Rameshbhai Shingala

Selected Full-Text Master Theses 2021-

Electroencephalography (EEG)-based emotion recognition has emerged as a critical component of affective computing and clinical neuroscience. Existing approaches to this problem primarily reduce the multi-dimensional EEG time series to a single averaged feature vector, thereby discarding the temporal structure of the emotional response. The present work addresses three identified gaps in the literature: the absence of temporal interpretability, the uniform use of frequency bands, and the use of single-scale temporal feature extraction. A deep learning architecture, MST-Mamba-Asym, is proposed, comprising four components: Asymmetry Attention, which encodes hemispheric asymmetry by computing signed left–right channel differences, FreqBandAttention, which learns differential weights across …

Large Language Model Communication And Data Transfer Across A Simulated Telephone Line, Jared Reyes

Dissertations and Theses

This thesis presents a proof-of-concept communication system in which two local large language model endpoints communicate across a simulated analog telephone line using legacy USB modems. The project combines modem voice mode, modem data mode, local speech processing, and structured machine messaging into a single staged session. During the voice phase, one endpoint places a call, the other answers, speech generated by a locally hosted LLaMA-family model is synthesized with Piper, transmitted through the modem voice path, captured on the remote side, and transcribed with Faster-Whisper to drive the next response. After the voice exchange, the system transitions to a …

Artificial Intelligence Methods For Circadian Rhythm Recovery And Disease Identification From High-Dimensional Omics Data, Aram Ansary Ogholbake

Theses and Dissertations--Computer Science

High-throughput transcriptomic and proteomic technologies have enabled opportunities for studying biological processes and disease mechanisms. However, extracting meaningful biological information from these high-dimensional datasets remains challenging due to limited sample sizes, biological heterogeneity, measurement noise, and the absence of biological annotations. In particular, many molecular datasets lack temporal information required for circadian analysis, making the study of circadian rhythms difficult. Moreover, disease diagnosis and biomarker discovery from transcriptomic data often rely on complex machine learning models whose predictions are difficult to interpret and may not generalize well across independent datasets and experimental platforms. These limitations motivate the development of artificial …

Ai For Life Sciences: From Geometric Protein Modeling To Multimodal Drug Design, Feng Jiang

Computer Science and Engineering Dissertations

Predicting biomolecular interactions, from immune recognition to drug–target binding, is a central problem in the life sciences and computational drug discovery. Deep learning has advanced this area, yet three challenges persist: the topology of large, highly imbalanced interaction networks; structural noise in computationally predicted protein models; and the integration of multimodal information such as functional text and taxonomic annotations. This dissertation develops a coherent set of models spanning immune complex prediction and small-molecule drug design: graph learning that addresses network topology and severe class imbalance; a noise-tolerant method that fuses predicted structures with evolutionary sequence features; and multimodal representation learning …

Operational Hallucination And Safety Drift In Ai Agents, Shasha Yu, Fiona Carroll, Barry L. Bentley

School of Professional Studies

Large language models (LLMs) serving as planners in tool-using autonomous agents introduce dynamic reliability risks in multi-turn execution. While single-turn safety mechanisms are relatively mature, extended interactions reveal structural vulnerabilities where initial alignment degrades over time. This paper empirically characterizes two observed failure modes across multiple state-of-the-art LLMs: Safety Drift, the gradual erosion of declared safety intent leading to constraint-violating actions (e.g., textual refusal followed by reconnaissance and unsafe execution), and Operational Hallucination, persistent repetitive tool calls indicative of flawed state perception (e.g., livelocks even in legitimate tasks). Through controlled multi-turn evaluation on high-stakes ethical dilemmas, malicious requests, and benign …

When Saying "No" Is Not Enough: Cognitive-Action Decoupling And The Illusion Of Safety In Llm Agents, Shasha Yu, Fiona Carroll, Barry L. Bentley

School of Professional Studies

Current safety evaluations of large language models (LLMs) predominantly rely on textual compliance, implicitly assuming that refusal-style responses correspond to safe behavior. This assumption becomes fragile when LLMs are embedded in agentic systems with the ability to execute state-changing actions. In this paper, we present an empirical critique of text-centric safety evaluation through an action-aware study of LLM agents under controlled conditions. Across multiple state-of-the-art models, we observe a recurring cognitive–action decoupling: agents generate policy-aligned refusal language while still producing unsafe tool-mediated action proposals. This produces an illusion of safety, where conversational audits indicate compliance even as operational risk persists. …

Ransomware As Organization: A Comparative Analysis Of Corporate And Criminal Structures In Conti, George Urling

Theses, Dissertations and Capstones

Cybercriminal groups continue to pose major threats to global cybersecurity. One of the most common types of cybercriminal groups are, “Ransomware-as-a-Service (RaaS)" groups, who create and sell ransomware. While research is conducted into the development of ransomware, there is limited reporting on the organizational structure and habits of RaaS groups. In 2022, prominent RaaS group Conti had their chat logs leaked, with the logs ranging from 2020 to 2022. This study seeks to provide a deeper understanding of RaaS group structures by utilizing the Conti leaked logs as a case study. The study, entitled “Ransomware as Organization: A Comparative Analysis …

A Macrocognitive Design Taxonomy For Simulation-Based Training Systems: Bridging Cognitive Theory And Human-Computer Interaction, Jessica M. Johnson

Virginia Digital Maritime Center (VDMC) Faculty Publications

Simulation-based training systems are increasingly deployed to prepare learners for complex, safety-critical, and dynamic work environments. While advances in computing have enabled immersive and data-rich simulations, many systems remain optimized for procedural accuracy and surface-level task performance rather than the macrocognitive processes that underpin adaptive expertise. Macrocognition encompasses higher-order cognitive processes that are essential for performance transfer beyond controlled training conditions. When these processes are insufficiently supported, training systems risk fostering brittle strategies and negative training effects. This paper introduces a macrocognitive design taxonomy for simulation-based training systems derived from a large-scale meta-analysis examining the transfer of macrocognitive skills from …

Towards Multimodal Guideline-Aligned Agentic Systems, Wenliang Zhong

Computer Science and Engineering Dissertations - Archive

I present my work on building multimodal guideline-aligned agentic systems designed to enable AI agents to solve complex real-world tasks. My research addresses two critical perspectives: (1) Instruction-Aware Embedding Models for flexible and universal embedding tasks, and (2) Guideline-Driven LLM Agents that leverage domain-specific guidelines to perform expert-level tasks. These components address embedding and generation tasks, respectively, and lay the foundation for a hybrid agent capable of tackling challenging real-world applications.

From the embedding perspective, I first address the instruction-following capabilities of embedding models. While Large Language Models (LLMs) excel at instruction following, they are primarily designed for generation rather …

Computational Clinical Judgment: Predicting Risk With Large Language Models, Hannah Laqueur, Ryan W. Copus

Faculty Works

For seventy years, research has shown actuarial methods outperform clinical judgment. Yet actuarial approaches have limitations: they generally rely on structured data; cannot exploit rare case-specific details; have limited accuracy where outcome data are scarce or incomplete; and cannot offer case-level justifications. Large language models (LLMs) offer a different approach. Like actuarial methods, they aggregate information algorithmically, but like clinicians, they bring general knowledge and can provide case-level justifications. We prompted seven LLMs to assess rearrest risk from 113 parole hearing transcripts and compared their predictions to a machine learning model trained on 4,000 cases with 91 administrative variables. GPT-5 …

Do Algorithms Dream Of Electric Muses? Teaching Creative Writing In The Age Of Generative Ai, Anna Leahy

English Faculty Articles and Research

In Philip K. Dick’s novel Do Androids Dream of Electric Sheep? androids are given a psychological test to confirm they are not human before killing them. The story’s end suggests that humans will treat a seemingly harmless android as authentically as a human even when humans are aware the android is not human. Students use tools like ChatGPT, which function as autocomplete on steroids, to produce text using probabilistic relationships among words, and instructors can’t always tell the difference between average student writing and Gen AI text. In creative writing classes, instructors might use thinking for oneself as a central …

Multimodal Deep Learning For Biological Data Understanding, Saiyang Na

Computer Science and Engineering Dissertations

This dissertation presents three contributions to multimodal deep learning for biological data understanding, addressing the fundamental challenge of cross-modal alignment from two complementary perspectives: designing effective multimodal fusion methods for specific biomedical applications, and proposing a general framework for higher-order multimodal alignment that captures hierarchical structure in data.

First, we develop Cmai, a deep learning framework for B cell receptor (BCR) to antigen binding prediction that aligns BCR sequence information with antigen three-dimensional structures using contrastive learning. Cmai achieves an average AUROC of 0.907 across 17 antigens and 5 independent cohorts, and demonstrates clinical utility in predicting immune checkpoint inhibitor …