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Diastereoselective Synthesis Of Novel 2,5-Dioxopyrrolidine Derivatives Via Biocatalytic Domino Reactions, Saadieh Mohajer, Robabeh Baharfar Jan 2017

Diastereoselective Synthesis Of Novel 2,5-Dioxopyrrolidine Derivatives Via Biocatalytic Domino Reactions, Saadieh Mohajer, Robabeh Baharfar

Turkish Journal of Chemistry

A series of novel 2,5-dioxopyrrolidines were synthesized by the one-pot reaction of coumarin-3-carboxylic acids 1 with thiourea derivatives and alkyl isocyanides in the presence of Fe$_{3}$O$_{4}$ NPs @ lipase as heterogeneous reusable nanobiocatalysts with high yields.

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Achieving Elusive Transformations With Organocatalysis: Direct $\Beta $-Carbon Activation Of Saturated Carbonyl Compounds, Rafik Rajjak Shaikh Jan 2017

Achieving Elusive Transformations With Organocatalysis: Direct $\Beta $-Carbon Activation Of Saturated Carbonyl Compounds, Rafik Rajjak Shaikh

Turkish Journal of Chemistry

Direct $\beta $-carbon activation of saturated carbonyl compounds for carrying out fast forward $\beta$-functionalization has been one of the most difficult to achieve tasks in catalysis. In the past few years, this challenging issue has attracted considerable attention among the chemical community that has led to fruitful developments to accomplish this elusive transformation. In this short review, we highlight recent developments for direct $\beta $-carbon functionalization of saturated carbonyl compounds based on conceptually new methods including oxidative enamine catalysis, $N$-heterocyclic carbene (NHC)-assisted catalysis, and photoredox catalysis.

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Synthesis And Antinociceptive Activities Of Some Novel Benzimidazole-Piperidine Derivatives, Ümi̇de Demi̇r Özkay, Özgür Devri̇m Can, Nazli Turan, Betül Kaya Çavuşoğlu Jan 2017

Synthesis And Antinociceptive Activities Of Some Novel Benzimidazole-Piperidine Derivatives, Ümi̇de Demi̇r Özkay, Özgür Devri̇m Can, Nazli Turan, Betül Kaya Çavuşoğlu

Turkish Journal of Chemistry

In this study, a series of benzimidazole-piperidine derivatives were synthesized with the objective of developing potent antinociceptive agents. Some 2-(4-substituted-phenyl)-1-[2-(piperidin-1-yl)ethyl]-1$H$-benzimidazole derivatives were obtained by microwave-supported reaction of an appropriate 2-(4-substituted-phenyl)-1$H$-benzimidazole with 2-(piperidine-1-yl)ethyl chloride. The chemical structures of the compounds were elucidated by FT-IR, $^{1}$H NMR, $^{13}$C NMR, and HRMS spectral data. Antinociceptive activity was assessed by conducting hot-plate, paw-pressure, and formalin tests. Morphine (5 mg/kg, i.p) was used as a reference drug. Among the tested compounds 2a-2d and 2f-2h (10 mg/kg) increased the maximum possible effect (MPE) % values calculated for the hot-plate and paw-pressure tests and decreased the paw …

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Synthesis And Mao Inhibitory Activity Of Novel Thiazole-Hydrazones, Özlem Atli, Yusuf Özkay Jan 2017

Synthesis And Mao Inhibitory Activity Of Novel Thiazole-Hydrazones, Özlem Atli, Yusuf Özkay

Turkish Journal of Chemistry

A series of new thiazole-hydrazones 3a-3n were synthesized, characterized, and screened for their $h$MAO-A and $h$MAO-B inhibitory activity by an in vitro fluorometric method. Selectivity indexes (SIs) were expressed as IC$_{50}$ (MAO-A) / IC$_{50}$ (MAO-B). Compound 3f showed promising $h$MAO-A inhibition with an IC$_{50}$ value of 1.20 $\mu $M and displayed a very significant SI of 0.04 towards $h$MAO-A. The mechanism of $h$MAO-A inhibition was investigated by enzyme kinetics using Lineweaver--Burk graphics. Compound 3f was further screened for its cytotoxicity by using a healthy NIH/3T3 mouse embryonic fibroblast cell line (ATCC CRL1658) and was evaluated as nontoxic at its effective …

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A New Method For Simultaneous Determination Of Trace Amounts Of Cu(Ii) And Ni(Ii) Ions By Preconcentration And Spectrophotometric Analysis, Berri̇n Topuz, Şennur Merve Adanur, Arda Yalçuk Jan 2017

A New Method For Simultaneous Determination Of Trace Amounts Of Cu(Ii) And Ni(Ii) Ions By Preconcentration And Spectrophotometric Analysis, Berri̇n Topuz, Şennur Merve Adanur, Arda Yalçuk

Turkish Journal of Chemistry

Immediate preconcentration and spectrophotometric methods have been developed for the determination of trace amounts of cupric ion (Cu(II)) and nickel ion (Ni(II)) through a solid phase extraction with XAD-4-N,N'-bis-(salicylidene) cyclohexanediamine (XAD-4-SCHD) resin and a complex color reaction of the ions with 2,6-dimethyl-morpholine dithiocarbamate (DMMDTC) in Triton X-100 media. A high preconcentration factor of 125 was achieved. The spectrophotometric method was based on the measurements of the absorption of colored chelates of ions complexing with DMMDTC, and the adsorptions of the complex solutions were measured at their maximum absorption peaks at 460 and 328 nm for Cu(II) and Ni(II) ions, respectively. …

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Experimental And Computational Studies On The Absorption Properties Of Novel Formazan Derivatives, Gülşen Türkoğlu, M. Emi̇n Çinar Jan 2017

Experimental And Computational Studies On The Absorption Properties Of Novel Formazan Derivatives, Gülşen Türkoğlu, M. Emi̇n Çinar

Turkish Journal of Chemistry

Eight novel 3-(4-(benzyloxy)phenyl)-5-(4-bromophenyl)-1-(4-substituted-phenyl)formazan (4a-4h) were synthesized by coupling of substituted phenylhydrazones with diazonium salts of 4-bromoaniline. The substituted phenylhydrazones, which are intermediate products, were obtained from the condensation of substituted phenylhydrazines with 4-(benzyloxy)benzaldehyde. All target compounds were characterized by using FTIR, $^{1}$H NMR, $^{13}$C NMR, LC$-$MS spectrometry, and elemental analysis. Absorption spectra of these compounds in solvents with different polarities were investigated thoroughly. Time-dependent density functional theory (TD-DFT) studies were conducted to shed light on their electronic structures, Kohn--Sham orbitals, and electronic transitions.

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Synthesis, In Vitro Dna Interactions, Cytotoxicities, Antioxidative Activities, And Topoisomerase Inhibition Potentials Of Mn(Ii), Co(Ii), Ni(Ii), Cu(Ii), And Zn(Ii) Complexes With Azo-Oxime Ligands, Melek Çol Ayvaz, İbrahi̇m Turan, Bayram Dural, Seli̇m Demi̇r, Kaan Karaoğlu, Yüksel Ali̇yazicioğlu, Keri̇m Serbest Jan 2017

Synthesis, In Vitro Dna Interactions, Cytotoxicities, Antioxidative Activities, And Topoisomerase Inhibition Potentials Of Mn(Ii), Co(Ii), Ni(Ii), Cu(Ii), And Zn(Ii) Complexes With Azo-Oxime Ligands, Melek Çol Ayvaz, İbrahi̇m Turan, Bayram Dural, Seli̇m Demi̇r, Kaan Karaoğlu, Yüksel Ali̇yazicioğlu, Keri̇m Serbest

Turkish Journal of Chemistry

Mn(II), Co(II), Ni(II), Cu(II), and Zn(II) transition metal complexes of 2-hydroxy-5-[(E)-(4-phenyl) diazenyl] benzaldehyde oxime and 2-hydroxy-5-[(E)-(4-nitrophenyl) diazenyl] benzaldehyde oxime ligands were synthesized and characterized through NMR, IR, ESI mass, and UV analysis. DNA binding abilities of the complexes were revealed using a UV-Vis spectrophotometer with the absorption titration and competitive binding techniques. Hydrolytic and oxidative DNA cleavage activities under different conditions were also proved. Topoisomerase I inhibition efficiencies and in vitro free radical scavenging activities of all complexes were examined. Finally, the selective cytotoxic potentials of all complexes were evaluated in human colon cancer, normal colon, and fibroblast cell lines …

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Nanocomposite Copper Metal As An Efficient Heterogeneous Catalyst In Click Synthesis Of 1,2,3-Triazoles In Aqueous Media, Vajihe Nejadshafiee, Hossein Naeimi Jan 2017

Nanocomposite Copper Metal As An Efficient Heterogeneous Catalyst In Click Synthesis Of 1,2,3-Triazoles In Aqueous Media, Vajihe Nejadshafiee, Hossein Naeimi

Turkish Journal of Chemistry

Copper/periodic mesoporous organosilica (Cu/PMO) nanocomposites provided a highly active, reusable, globular, solid-phase catalyst for click chemistry. The reaction proceeds by mixing organohalides, sodium azide, alkyne, and the catalyst in an aqueous medium to afford the desired products. The cost efficiency and recyclability of the catalyst up to six runs without appreciable loss of activity and high yields of products make this procedure greener.

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Cyclic Voltammetry Behavior Of Tamoxifen In Different Electrolytes, Electrochemical Characterization, And Its Measurement By Differential Pulse Anodic Voltammetry, Zeinab Deris Falahieh, Mehdi Jalali, Mohammad Alimoradi Jan 2017

Cyclic Voltammetry Behavior Of Tamoxifen In Different Electrolytes, Electrochemical Characterization, And Its Measurement By Differential Pulse Anodic Voltammetry, Zeinab Deris Falahieh, Mehdi Jalali, Mohammad Alimoradi

Turkish Journal of Chemistry

Cyclic voltammetry (CV) was performed on tamoxifen (tam) using different electrodes and in various acidic electrolytes containing 10% v v$^{-1}$ methanol (MeOH). Tam oxidation was found to be most favorable using 0.1 mol L$^{-1}$ H$_{2}$SO$_{4}$. To investigate the mechanism, we performed chronoamperometry, CV at different scan rates, differential pulse anodic voltammetry (DPAV), and electrochemical impedance spectroscopy on tam-covered glassy carbon electrodes (GCEs). The electrode area, diffusion coefficient, and surface concentration ($\Gamma )$ of tam were calculated to be 0.062 cm$^{2}$, 3.65 $\times $ 10$^{-6}$ cm$^{2}$ s$^{-1}$, and 3.2 $\times $ 10$^{-10}$ mol cm$^{-2}$ respectively. Then the effects of different parameters …

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Synthesis Of Novel 5-Substituted Phenyl-3-(P-Isopropylphenyl)-1-Phenylformazan And Their Biological Activities, Ayşe Şahi̇n Yağlioğlu, Hülya Şenöz Jan 2017

Synthesis Of Novel 5-Substituted Phenyl-3-(P-Isopropylphenyl)-1-Phenylformazan And Their Biological Activities, Ayşe Şahi̇n Yağlioğlu, Hülya Şenöz

Turkish Journal of Chemistry

Novel 1-substituted 3-(p-isopropylphenyl)-5-phenylformazans (3a--g) were synthesized and characterized by elemental analysis, $^{1}$H NMR, and FT-IR techniques and UV-visible spectroscopy. Antiproliferative activities of 3a--g against HeLa and C6 cells were determined using the BrdU cell proliferation ELISA assay. 5-Florouracil was used as the positive control. The effects of substituents (--H, --CH$_{3}$, and --I) and their positions ($ortho$, $meta$, and $para$) on the antiproliferative activities were evaluated. The results of the assay indicate that I substituent exhibited higher activity against the cells at the $meta$ and $para$ positions than --CH$_{3}$ and --H substituents. 3a--g exhibited both high antiproliferative activities against C6 cells …

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Phytoplankton Plastid Proteomics: Cracking Open Diatoms To Understand Plastid Biochemistry Under Iron Limitation, Skyler J. Nunn, Phoebe Dreux Chappell, Kristofer Gomes, Anasthasia Bonderenko, Bethany D. Jenkins, Brook L. Nunn Jan 2017

Phytoplankton Plastid Proteomics: Cracking Open Diatoms To Understand Plastid Biochemistry Under Iron Limitation, Skyler J. Nunn, Phoebe Dreux Chappell, Kristofer Gomes, Anasthasia Bonderenko, Bethany D. Jenkins, Brook L. Nunn

OES Faculty Publications

Diatoms, such as Thalassiosira pseudonana, are important oceanic primary producers, as they sequester carbon dioxide (CO₂) out of the atmosphere, die, and precipitate to the ocean floor. In many areas of the world’s oceans, phytoplankton, such as diatoms, are limited in growth by the availability of iron (Fe). Fe is an essential nutrient for phytoplankton, as it is central in the electron transport chain component of photosynthesis. Through this study, we examined if Fe-limitation makes a significant difference in the proteins expressed within the chloroplast, the power source for diatoms. Here, we utilized a new plastid isolation technique specific …

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Assessment Of Short-Term Toxicity Of Titanium Dioxide Nano Fiber (Tdnf) In Sprague Dawley Rats, Daniel A. Hunter Jan 2017

Assessment Of Short-Term Toxicity Of Titanium Dioxide Nano Fiber (Tdnf) In Sprague Dawley Rats, Daniel A. Hunter

College of Graduate Studies: Theses & Dissertations

Nanotechnology is easily becoming one of the fastest growing markets around the globe. Synthetic nanomaterials have many unique chemical and physical properties, mainly due to their huge specific surface area and chemical makeup. Specifically, titanium dioxide (TiO2) nanomaterials have high stability, anticorrosive and photocatalytic properties. These nanomaterials have applications for semiconductor photocatalysis, treatment of water, as a photoactive material in nanocrystalline solar cells, and medicine. However, not much is known about the toxicity of TiO2 in the nanofiber form. The objective of the present study is to investigate the adverse effects associated with acute ingestion of TiO …

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Photodynamic Cancer Therapy A Study Of The Photochemical Properties Of Meso-Tetra (2,3,4-Trifluorophenyl) Porphyrin And Meso-Tetra (2,3,5,6-Tetrafluorophenyl) Porphyrin, Delanie L. Newberry Jan 2017

Photodynamic Cancer Therapy A Study Of The Photochemical Properties Of Meso-Tetra (2,3,4-Trifluorophenyl) Porphyrin And Meso-Tetra (2,3,5,6-Tetrafluorophenyl) Porphyrin, Delanie L. Newberry

Honors College Theses

Photodynamic therapy(PDT) is a type of cancer treatment that utilizes photosensitive molecules that absorb photons and use that energy to create cytotoxic molecules. Porphyrins are photosensitive compounds that can be used selectively at the site of cancerous tumors. Their selectivity is due to the fact the porphyrins are generally not toxic in absence of light; in the presence of light, the drug will be activated to produce the cytotoxic molecule, singlet oxygen(1O2 ). 9,10 diphenyl anthracene(DPA) was used to simulate the cancer cells and monitor how effective the porphyrin was in creating 1O2, because DPA reacts with 1O2 form diphenyl …

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Regioselective Electrolytic 5,8-Difluorination Of Quinolines, Sean P. Spurlin Jan 2017

Regioselective Electrolytic 5,8-Difluorination Of Quinolines, Sean P. Spurlin

Honors College Theses

Over the past decade, synthesis of organofluorine compounds has become a mainstream research focus. The introduction of fluorine uniquely affects the biological properties of organic molecules such as making them more bioavailable, lipophilic and metabolically stable, and possibly increase the strength of a compound’s interactions with a target protein. Approximately 30% of agrochemicals and 20% of pharmaceuticals contain fluorine, including commonly prescribed drugs such as Lipitor, Lexapro and Prozac. This work describes the development of a new methodology to incorporate fluorine into organic compounds. Our new method involves a regioselective electrochemical 5,8-difluorination of quinolines using HF:pyridine as both the reagent …

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A Rational Design Of A Selective Inhibitor For Kv1.1 Channels Prevalent In Demyelinated Nerves That Improves Their Impaired Axonal Conduction, Ahmed Al-Sabi, Declan Daly, Patrick Hoefer, Gemma K. Kinsella, Charles Metais, Mark Pickering, Caroline Herron, Seshu Kumar Kaza, Kieran Nolan, J. Oliver Dolly Jan 2017

A Rational Design Of A Selective Inhibitor For Kv1.1 Channels Prevalent In Demyelinated Nerves That Improves Their Impaired Axonal Conduction, Ahmed Al-Sabi, Declan Daly, Patrick Hoefer, Gemma K. Kinsella, Charles Metais, Mark Pickering, Caroline Herron, Seshu Kumar Kaza, Kieran Nolan, J. Oliver Dolly

Articles

K+ channels containing Kv1.1 α subunits, which become prevalent at internodes in demyelinated axons, may underlie their dysfunctional conduction akin to muscle weakness in multiple sclerosis. Small inhibitors were sought with selectivity for the culpable hyper-polarizing K+ currents. Modeling of interactions with the extracellular pore in a Kv1.1-deduced structure identified diaryldi(2-pyrrolyl)methane as a suitable scaffold with optimized alkyl ammonium side chains. The resultant synthesized candidate [2,2′-((5,5′(di-p-topyldiaryldi(2-pyrrolyl)methane)bis(2,2′carbonyl)bis(azanediyl)) diethaneamine·2HCl] (8) selectively blocked Kv1.1 channels (IC50 ≈ 15 μM) recombinantly expressed in mammalian cells, induced a positive shift in the voltage dependency of K+ current activation, and slowed its kinetics. It …

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Evaluation Of Chemical Immersion Treatments To Reduce Microbial Populations In Fresh Beef, Ahmed Kassem, Joseph Meade, James Gibbons, Kevina Mcgill, Ciara Walsh, James Lyng, Paul Whyte Jan 2017

Evaluation Of Chemical Immersion Treatments To Reduce Microbial Populations In Fresh Beef, Ahmed Kassem, Joseph Meade, James Gibbons, Kevina Mcgill, Ciara Walsh, James Lyng, Paul Whyte

Articles

The aim of the current study was to assess the ability of a number of chemicals (acetic Acid (AA), citric acid (CA) lactic acid (LA), sodium decanoate (SD) and trisodium phosphate (TSP)) to reduce microbial populations (total viable count, Campylobacter jejuni, Escherichia coli, Salmonella typhimurium and Listeria monocytogenes) on raw beef using an immersion system. The following concentrations of each chemical were used: 3 & 5% for AA, CA, LA, SD and 10 & 12% for TSP. Possible synergistic effects of using combinations of two chemicals sequentially (LA +CA and LA +AA) were also investigated. L*, a* and b* values …

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The T6a Modification Acts As A Positive Determinant For The Anticodon Nuclease Prrc, And Is Distinctively Nonessential In Streptococcus Mutans, Jo Marie Bacusmo, Silvia S. Orsini, Jennifer Hu, Michael Demott, Patrick C. Thiaville, Ameer Elfarash, Mellie June Paulines, Diego Rojas-Benítez, Birthe Meineke, Christopher Deutsch, Dirk Iwata-Reuyl, Patrick A. Limbach, Peter C. Dedon, Kelly C. Rice, Stewart Shuman, Valérie De Crécy-Lagard Jan 2017

The T6a Modification Acts As A Positive Determinant For The Anticodon Nuclease Prrc, And Is Distinctively Nonessential In Streptococcus Mutans, Jo Marie Bacusmo, Silvia S. Orsini, Jennifer Hu, Michael Demott, Patrick C. Thiaville, Ameer Elfarash, Mellie June Paulines, Diego Rojas-Benítez, Birthe Meineke, Christopher Deutsch, Dirk Iwata-Reuyl, Patrick A. Limbach, Peter C. Dedon, Kelly C. Rice, Stewart Shuman, Valérie De Crécy-Lagard

Chemistry Faculty Publications and Presentations

Endoribonuclease toxins (ribotoxins) are produced by bacteria and fungi to respond to stress, eliminate non-self competitor species, or interdict virus infection. PrrC is a bacterial ribotoxin that targets and cleaves tRNALys UUU in the anticodon loop. In vitro studies suggested that the post-transcriptional modification threonylcarbamoyl adenosine (t6A) is required for PrrC activity but this prediction had never been validated in vivo. Here, by using t6A-deficient yeast derivatives, it is shown that t6A is a positive determinant for PrrC proteins from various bacterial species. Streptococcus mutans is one of the few bacteria where the t …

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Isolation And Spectroscopic Characterization Of Zn(Ii), Cu(Ii), And Pd(Ii) Complexes Of 1,3,4-Thiadiazole-Derived Ligand, Dariusz Karcz, Arkadiusz Matwijczuk, Bozena Boron, Bernadette Creaven, Leszek Fiedor, Andrzej Niewiadomy, Mariusz Gagos Jan 2017

Isolation And Spectroscopic Characterization Of Zn(Ii), Cu(Ii), And Pd(Ii) Complexes Of 1,3,4-Thiadiazole-Derived Ligand, Dariusz Karcz, Arkadiusz Matwijczuk, Bozena Boron, Bernadette Creaven, Leszek Fiedor, Andrzej Niewiadomy, Mariusz Gagos

Articles

A series of complexes incorporating Zn(II), Cu(II), and Pd(II) ions, and 4-(5-heptyl-1,3,4-thiadiazol-2-yl)benzene-1,3-diol (L1) as model ligand, was synthesized in order to examine the nature of potential interactions between biologically active ligands, 1,3,4-thiadiazoles and metal ions with proven biological relevance. The structures of the compounds isolated were characterized using a number of spectroscopic methods including IR, Uv–vis, AAS, steady state and time-resolved fluorescence (TRF). The results obtained suggest that the L1-Zn(II) and L1-Pd(II) complexes consist of one molecule of L1 and one acetate ion acting as ligands, while the L1-Cu(II) complex adapts a 2:1 (L1: metal) stoichiometry. The coordination of L1 …

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The Maculoprotective Effect Of A Thiol Antioxidant In Retinal Degeneration Models, Hsiu-Jen Wang Jan 2017

The Maculoprotective Effect Of A Thiol Antioxidant In Retinal Degeneration Models, Hsiu-Jen Wang

Doctoral Dissertations

"Age-related macular degeneration (AMD) is a leading cause of irreversible blindness among adults, age 60 and older, in developed countries. While oxidative stress is implicated in the pathogenesis of AMD, clinical studies have shown that dietary antioxidants can delay progression of AMD. Currently, there is no FDA-approved treatment for AMD. Therefore, we hypothesized that N-acetylcysteine amide (NACA), a thiol antioxidant, would protect retinal pigment epithelium and impede the progression of retinal degeneration. The goal of this work was to evaluate the efficacy of NACA in preventing retinal pigment epithelial cell and photoreceptor death in AMD models. To achieve this, we …

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Drinking Water Disinfection By-Products Detection, Formation And The Precursors Removal Study, Runmiao Xue Jan 2017

Drinking Water Disinfection By-Products Detection, Formation And The Precursors Removal Study, Runmiao Xue

Doctoral Dissertations

"Haloacetic acids (HAAs) and trihalomethanes (THMs) are two groups of commonly found disinfection by-products (DBPs). Iodinated THMs and HAAs were observed after disinfection of water containing high level of iodide and are proved to be more toxic than their corresponding chlorinated and brominated species. In the presented dissertation, a novel rapid and sensitive high performance ion chromatography-tandem mass spectrometry (HPIC-MS/MS) method has been developed for simultaneous analysis of all these HAAs, bromate, bromide, iodide, and iodate, seventeen compounds in total, without any tedious sample preparation. Besides an efficient analytical method for the detection of DBPs, seeking for a green disinfectant …

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Rapid Quantification Of Trypsin Inhibitors In Food And Feed Formulations With Electrospray Ionization Mass Spectrometry, Radheshyam Panta Jan 2017

Rapid Quantification Of Trypsin Inhibitors In Food And Feed Formulations With Electrospray Ionization Mass Spectrometry, Radheshyam Panta

Doctoral Dissertations

"Presence of anti- nutrients deteriorate the nutritional value of animal foods and feed formulations. The important one being trypsin inhibitors. Trypsin inhibitors in food and feed formulations lower the protein supplement and hence the ultimate consequence is the decrease in growth and development of animals. It is therefore, crucial to monitor trypsin inhibitors in animal food and feed formulations. Research work mentioned in this dissertation is based on the development of rapid, more accurate and robust method for determination of trypsin inhibitor in food and feed formulations. The developed method includes extraction of trypsin inhibitor from food and feed formulation …

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Biomarker Discovery Using Urinary Metabolomics For Noninvasive Early Cancer Detection, Casey Franklin Burton Jan 2017

Biomarker Discovery Using Urinary Metabolomics For Noninvasive Early Cancer Detection, Casey Franklin Burton

Doctoral Dissertations

"The development of new screening methods for the early detection of cancer remains one of the foremost challenges facing modern cancer research. The emergence of new analytical technologies and their application to 'omics'-based approaches has provided researchers with powerful new tools for molecular biomarker discovery that may benefit early screening of cancer. This dissertation outlines several key advances made toward the application of urinary metabolomics to cancer biomarker discovery. The term urinary metabolomics here refers to the investigation of small metabolites in urine as potential disease biomarkers. The advantage of using this approach lies in its noninvasive sampling characteristics and …

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Extraction And Quantification Of Sinapinic Acid From Irish Rapeseed Meal And Assessment Of Angiotensin-I Converting Enzyme (Ace-I) Inhibitory Activity, Leah Quinn, Steven G. Gray, Steve Meaney, Stephen Finn, Padraig Mcloughlin, Maria Hayes Jan 2017

Extraction And Quantification Of Sinapinic Acid From Irish Rapeseed Meal And Assessment Of Angiotensin-I Converting Enzyme (Ace-I) Inhibitory Activity, Leah Quinn, Steven G. Gray, Steve Meaney, Stephen Finn, Padraig Mcloughlin, Maria Hayes

Articles

Phenolic compounds, including phenolic acids, are known to play a protective role against the development of cardiovascular disease. The aim of this work was to generate a phenolic acid extract from Irish rapeseed meal, to determine the quantity of sinapinic acid (SA) in this fraction and to assess the ability of this fraction to inhibit the enzyme angiotensin-I converting enzyme (ACE-I; EC 3.4.15.1). A crude phenolic extract (fraction 1), free phenolic acid containing extract (fraction 2), and an extract containing phenolic acids liberated from esters (fraction 3) were generated from Irish rapeseed meal using a methanol:acetone:water solvent mixture (7:7:6). The …

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Size And Shape Control In Metal Nanoparticles And Nanocomposites, Tomendro Subedi Jan 2017

Size And Shape Control In Metal Nanoparticles And Nanocomposites, Tomendro Subedi

Theses and Dissertations (Comprehensive)

This thesis describes major findings on the shape transformation of the precursor silver decahedral nanoparticles (AgDeNPs) with pentagonal symmetry and twin defects into silver pentagonal prism nanoparticles (AgPPNPs) using Br¯ as a shape selective reagent. Silica-encapsulation of the gold-plated AgDeNPs was also carried out forming ordered arrays of silica encapsulated gold-plated AgDeNPs (SiO2@Au@AgDeNPs) of different sizes. At first, synthetic procedures for AgDeNPs (pentagonal bipyramids), silver pentagonal rod nanoparticles (AgPRNPs) and gold-plating of AgDeNPs (Au@AgDeNPs) were optimized. Gold plating enhances the chemical stability of AgDeNPs and preserves the superior plasmonic properties of silver. This thesis deals with the transformation …

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Natural Organic Matter Characterization And Lead Speciation As Indicators Of Potential Lead Bioavailability In Aquatic Environments, Giselle Cimprich Jan 2017

Natural Organic Matter Characterization And Lead Speciation As Indicators Of Potential Lead Bioavailability In Aquatic Environments, Giselle Cimprich

Theses and Dissertations (Comprehensive)

Trace metals and natural organic matter (NOM) are ubiquitous in aquatic environments. Some trace metals are essential for aquatic life, while other non-essential metals (like lead) can be toxic if present in great enough concentrations. Natural waters contain a combination of inorganic, and organic ligands capable of binding metals. While the chemistry of inorganic Pb species is well understood, and National Institute of Standards and Technology (NIST) certified K values are readily available, the interactions between metals and organic matter is not so clearly defined. It is important to understand how NOM interacts with metals in the environment, as the …

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Prospects For Cooperation On Tackling Nuclear And Radiological Terrorism In South Asia: India–Pakistan Nuclear Detection Architecture, Muhammad Umer Khan Dec 2016

Prospects For Cooperation On Tackling Nuclear And Radiological Terrorism In South Asia: India–Pakistan Nuclear Detection Architecture, Muhammad Umer Khan

International Journal of Nuclear Security

No abstract provided.

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Ph-Dependent Fluorescent Probe That Can Be Tuned For Cysteine Or Homocysteine, Yongkang Yue, Fangjun Huo, Xiaoqi Li, Ying Wen, Tao Yi, James C. Salamanca, Jorge O. Escobedo, Robert Strongin, Caixia Yin Dec 2016

Ph-Dependent Fluorescent Probe That Can Be Tuned For Cysteine Or Homocysteine, Yongkang Yue, Fangjun Huo, Xiaoqi Li, Ying Wen, Tao Yi, James C. Salamanca, Jorge O. Escobedo, Robert Strongin, Caixia Yin

Chemistry Faculty Publications and Presentations

The very close structural similarities between cysteine and homocysteine present a great challenge to achieve their selective detection using regular fluorescent probes, limiting the biological and pathological studies of these two amino thiols. A coumarin-based fluorescent probe was designed featuring pH-promoted distinct turn-on followed by ratiometric fluorescence responses for Cys and turn-on fluorescence response for Hcy through two different reaction paths. These specific responses demonstrate the activity differences between Cys and Hcy qualitatively for the first time. The probe could also be used for Cys and Hcy imaging in living cells.

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Hydrogen Evolution Properties On Individual Mos2 Nanosheets, Yu Gao, Juan Zhou, Yu-Wen Liu, Sheng-Li Chen Dec 2016

Hydrogen Evolution Properties On Individual Mos2 Nanosheets, Yu Gao, Juan Zhou, Yu-Wen Liu, Sheng-Li Chen

Journal of Electrochemistry

Molybdenum disulfide (MoS2) has been acknowledged to play important roles in hydrogen evolution reaction (HER) for hydrogen energy technology. Both computational and experimental results have suggested that the promising catalytic activity of MoS2 for the HER could be attributed to the sulfur edges of two-dimensional nanosheets, while their basal planes were catalytically inert. In order to verify this conclusion, we prepared single MoS2 sheet electrodes which were made of individual MoS2 sheets attached on the self-assembly monolayers (SAM) of SH(CH2)15COOH at Au ultramicroelectrodes (Au/SAM/MoS2). The single MoS2 sheet …

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Opportunities And Challenges In Developing Nuclear Security In Africa, James Larkin Mfr Dec 2016

Opportunities And Challenges In Developing Nuclear Security In Africa, James Larkin Mfr

International Journal of Nuclear Security

Those involved in nuclear security recognize that regions of significant instability in Africa have an impact on the safety and security of the continent's nuclear material and un-enriched uranium; however, some countries outside of continental Africa have taken counterproductive approaches to this issue. Despite challenges, the nuclear security community continues to develop and apply appropriate levels of nuclear security where needed. The community also takes every opportunity to make significant contributions to the global discourse on nuclear security culture.

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Myofilament Calcium Sensitivity: Consequences Of The Effective Concentration Of Troponin I, Jalal K. Siddiqui, Svetlana B. Tikunova, Shane D. Walton, Bin Liu, Meredith Meyer, Pieter P. De Tombe, Nathan Neilson, Peter M. Kekenes-Huskey, Hussam E. Salhi, Paul M.L. Janssen, Brandon J. Biesiadecki, Jonathan P. Davis Dec 2016

Myofilament Calcium Sensitivity: Consequences Of The Effective Concentration Of Troponin I, Jalal K. Siddiqui, Svetlana B. Tikunova, Shane D. Walton, Bin Liu, Meredith Meyer, Pieter P. De Tombe, Nathan Neilson, Peter M. Kekenes-Huskey, Hussam E. Salhi, Paul M.L. Janssen, Brandon J. Biesiadecki, Jonathan P. Davis

Chemistry Faculty Publications

Control of calcium binding to and dissociation from cardiac troponin C (TnC) is essential to healthy cardiac muscle contraction/relaxation. There are numerous aberrant post-translational modifications and mutations within a plethora of contractile, and even non-contractile, proteins that appear to imbalance this delicate relationship. The direction and extent of the resulting change in calcium sensitivity is thought to drive the heart toward one type of disease or another. There are a number of molecular mechanisms that may be responsible for the altered calcium binding properties of TnC, potentially the most significant being the ability of the regulatory domain of TnC to …

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