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Reproduction And Health Of A Beaver (Castor Canadensis) Population In Prince William County, Virginia, Timothy R. Brophy, Carl H. Ernst

Faculty Publications and Presentations

Reproduction and health were studied in a beaver (Castor canadensis) population from Prince William County, Virginia during 1998. Copulating beavers were observed in Quantico Creek at Prince William Forest Park on 22 January. Seven females from Quantico Marine Base were trapped between January and May, sacrificed, and dissected. Those reproductively active weighed over 39 pounds (17.7 kg) and were trapped before 1 March. Mean litter size based on counts of corpora lutea was 4.80 young (3-7); however, litter size based on the number of embryos present was only 2.75 (1-3), comparable to most others reported in the literature. Five of …

Synthesis Of Novel Sesquiterpene Lactones: Heritianin, Vallapianin And Vallapin, Kostas Gavardinas '99

Honors Projects

For decades considerable research has focused on improving the efficiency of crop protection. Many naturally occurring biodegradable compounds have often been used as pesticides and with increased environmental concerns, the identification of biologically active natural products has attracted significant attention. Fish toxicity has often been used as a measure of pesticidal activity. Several Southeast Asian mangrove species have been shown to possess ichthyotoxic properties. A bioassay of the extracts obtained from Heritiera littoralis, a Philippine mangrove plant, indicated toxicity toward fish thus suggesting the possibility of their use as pesticides. Three sesquiterpene lactones, Heritianin, Vallapin, and Vallapianin have been isolated …

Analysis Of Phytoestrogens By High Performance Liquid Chromatography, Anne A. Grippo, Yan Xie, Benjamin L. Rougeau, William V. Wyatt

Journal of the Arkansas Academy of Science

Phytoestrogens are biochemicals synthesized in plants which mimic steroidal estrogen activity in mammals. Analysis of these compounds in the legumes which produce them and in body fluids is important to the study of their physiological effects. High pressure liquid chromatography (HPLC) has been found to be an efficient and sensitive method of identification and quantitation of isoflavonoids, one class of phytoestrogen. Here we report the separation of three isoflavonoids, biochanin A, genistein and daidzein using an HPLC system with a Cg reverse phase column and a linear gradient mobile phase containing acetonitrile and acetic acid/water (10/90, v/v) over 60 minutes. …

Two-Photon Excitation Of Rhenium Metal-Ligand Complexes, Joseph R. Lakowicz, Felix N. Castellano, Ignacy Gryczynski, Zygmunt Gryczynski, Jonathan D. Dattelbaum

Chemistry Faculty Publications

We describe the emission spectral properties of two rhenium metal-ligand complexes with one and two-photon excitation, Re(bpy)₂(CO)₃Cl and [Re(bpy)(CO)₃CH₃CN]⁺, where bpy is 2,2’-bipyridyl and CH₃CN is acetonitrile. Similar emission spectra and intensity decay times characteristic of the metal-to-ligand charge transfer state were observed for one- and two-photon excitation. The lifetime and quantum yield of the acetonitrile complex are approximately 14-fold higher than that of the chloride complex. Both complexes display high anisotropies near 0.33 in frozen solution with one-photon excitation. Two-photon excitation results in anisotropies about 40% larger, …

Reply To Comment On ‘Nondipole Resonant X-Ray-Raman Spectroscopy: Polarized Inelastic Scattering At The K Edge Of Cl2,’, J. D. Mills, J. A. Sheehy, T. A. Ferrett, S. H. Southworth, R. Mayer, Dennis W. Lindle, P. W. Langhoff

Chemistry and Biochemistry Faculty Research

Mills et al. Reply: In their Comment on our Letter [1], Gel’mukhanov and Ågren [2] reiterate recent assertions [3] based on their earlier theoretical studies [4]. The primary purpose of their Comment is apparently to refute our stated conclusion that core-excited-state localization/ delocalization mechanisms are irrelevant to interpretations of reported Raman scattering experiments on homonuclear diatomic molecules.

Electrooxidation Of Linear Alkyl Benzene Sulfonate (Las) On Pt Electrodes, Bi̇rgül Yazici, Si̇bel Zor

Turkish Journal of Chemistry

The electrochemical behaviour of linear alklybenzene sulfonate (LAS) on Pt electrodes was investigated in 0.05M Na_2SO_4 and in 0.1M NaCl at pH=8 by the potentiokinetic method and by electrolysis. The anodic and cathodic semilogarithmic current-potential curves were obtained between -1.6V - +1.6V. The experimental discharge potentials were determined by means of current-potential-curves obtained by electrolysis between 0-3V. The percentages of surface active material remaining in the solution after specified periods (0-6hrs) were determined for different initial concentrations of LAS (30, 150, 300 ppm) by using a potentiostat at +1.6V and by applying a potential of 20V via a direct current …

Reaction Of Tribromonitromethane With Aldehydes And Ketones In The Presence Of Zn Metal In Aqueous Medium, Ali̇ Shaker Mahasneh

Turkish Journal of Chemistry

Aldehydes and ketones react with tribromonitromethane in the presence of zinc metal dust, ammonium chloride and water to give dibromonitroalcohols in good yields.

Aneuploidy Frequencies In Semen Fractions From Ten Oligoasthenoteratozoospermic Patients Donating Sperm For Intracytoplasmic Sperm Injection, Jerome Pfeffer, Myung-Geol Pang, Stanton F. Hoegerman, Christopher J. Osgood, M. W. Stacey, Jacob Mayer, Sergio Oehninger, William G. Kearns

Biological Sciences Faculty Publications

Objective: To determine aneuploidy frequencies in pellet and swim-up semen fractions from 10 infertile men with severe oligoasthenoteratozoospermia (OAT) who were donating sperm for intracytoplasmic sperm injection and to determine whether the swim-up isolation method would successfully separate aneuploid from haploid sperm.

Design: Prospective study.

Setting: Infertility clinic and molecular genetics laboratory.

Patient(s): Ten patients with severe OAT.

Intervention(s): Cytogenetic analyses by fluorescence in situ hybridization to determine aneuploidy frequencies for chromosomes 1, 13, 18, 21, X, and Y in sperm from swim-up and pellet fractions.

Main Outcome Measure(s): Gametic aneuploidy was scored in sperm fractions separated by the swim-up …

Capillary Electrophoresis/Tandem Mass Spectrometry With Array Detection, L.J. Deterding, K.B. Tomer, J.M.Y. Wellemans, Ronald Cerny, M.L. Gross

Ronald Cerny Publications

Mixtures of standard compounds of biological interest were analyzed by capillary electrophoresis in conjunction with tandem four sector mass spectrometry (MS/MS) using an array detector. Capillary electrophoresis offers extremely high separation efficiencies while array detection allows for the simultaneous acquisition of a large fraction of a tandem mass spectrum and high utilization of the sample ions produced. Consequently, improvements in sensitivity and structural information were observed for the combined techniques in comparison to similar measurements with a four-sector and a single-point detector. Coaxial continuous-flow fast atom bombardment was used to create (M + H) precursor ions of the separated analyses …

Affinity Chromatography: A Review Of Clinical Applications, David S. Hage

David Hage Publications

Affinity chromatography is a type of liquid chromatography that makes use of biological-like interactions for the separation and specific analysis of sample components. This review describes the basic principles of affinity chromatography and examines its use in the testing of clinical samples, with an emphasis on HPLCbased methods. Some traditional applications of this approach include the use of boronate, lectin, protein A or protein G, and immunoaffinity supports for the direct quantification of solutes. Newer techniques that use antibody-based columns for on- or off-line sample extraction are examined in detail, as are methods that use affinity chromatography in combination with …

Pyrene Labeled Poly (Aryl Ether) Monodendrons: Synthesis And Photophysical Studies, Wajiha Adnan Khan

Seton Hall University Dissertations and Theses (ETDs)

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Investigating The Allosteric Behavior Of Malate Dehydrogenase From Escherichia Coli, Eman M. Ghanem

Masters Theses

Regulatory mechanisms of malate dehydrogenase from E.coli (eMDH) involving NADH as an allosteric effector were investigated. The reaction was studied in both directions: malate oxidation and oxaloacetate reduction. When malate was the variable substrate, a plot of rate against substrate concentration was sigmoidal in the presence of 0.065 mM NADH, which indicates the presence of an allosteric site for NADH on the enzyme. Binding of NADH at the allosteric site causes conformational changes in the active site and, thereby, changes the catalytic activity of the enzyme. An increase in K_m value, from 1.3 to 3.9 mM malate was observed, …

Neural Networks In The Analysis Of Water-Soluble Sulfonylurea Herbicides Using An Lc/Ms, Joseph Michael Pompano

Theses and Dissertations

In this research, a hidden node pruning algorithm was developed for an artificial neural network (ANN) that automatically determined a more efficient size of the hidden layer, caused the ANN to resize itself, and then continued to train using a standard back-propagation algorithm. The hidden-node pruning algorithm was based on determining the number of significant eigenvalues present in the matrix of values produced by the hidden layer, starting with an excessive number of hidden nodes.

Eight sulfonylurea herbicides were used as the target analytes in this study. The ability of an ANN to simplify the sample preparation needed for analysis …

Photodecolorization And Photodegradation Of Crystal Violet Adsorbed On Metal Oxide Surfaces, Reygan Mashay Freeney

Dissertations and Theses @ UNI

The photodecolorization and the photodegradation of the triphenylmethane dye crystal violet (basic violet 3) adsorbed on four metal oxide catalysts was studied. Crystal violet dissolved in methanol was adsorbed onto the surfaces of an anatase and rutile titanium dioxide mixture, rutile titanium dioxide, zinc oxide, and magnesium oxide, and the solvent was allowed to evaporate. The samples were irradiated using a 1000 W mercury-xenon arc lamp with glass optics as a light source. A wide spectrum and narrow regions of the spectrum were studied to determine their impact on the decolorization and degradation of crystal violet. Diffuse reflectance spectroscopy was …

Degradation Of Explosives In Solution Using Bacteria, A Fungus (Phanerochaete Chrysosporium), Titanium Dioxide, Ozone, And Electrochemical Peroxidation, Stéphane Debost

Dissertations and Theses @ UNI

As a result of munitions manufacturing and decommissioning, explosive compounds have contaminated groundwater and soils at many sites throughout the U.S. and worldwide. Three of the most commonly occurring explosive contaminants are TNT, ROX, and HMX. Many processes, biological as well as physical, have been developed to remediate the contaminated material. But feasibility studies rarely take into account the three contaminants at once. We chose four of the technologies used to remediate explosives-contaminated water and studied comparatively their effectiveness and efficiency in degrading TNT, ROX, and HMX in solution at their maximal solubilities. The chosen technologies were bacterial and fungal …

Effects Of Ozonation On Cod Elimination Of Substituted Aromatic Compounds In Aqueus Solution, Şermi̇n Gül, Osman Seri̇ndağ, Hami̇t Boztepe

Turkish Journal of Chemistry

The chemical oxygen demand (COD) change of various substituted aromatic compounds, namely benzoic acid, p-aminobenzoic acid, p-toluenesulfonic acid, sulfanilic acid, nitro benzene, resorcinol, p-cresol, o- cresol, o-toluidine, aniline and 8-hydroxyquinoline were investigated at ozone doses of 5, 10, 15 and 20 mg O_{3}\cdotmin^{-1}, respectively. Percent COD removal of initial compounds after ozonation was compared with reported biodegradation results. The pH change and percent removal of selected compounds were also evaluated in ozone does of 20 mg O_{3}\cdotmin^{-1} up to 80 min. ozonation. The results showed that high ozone doses are needed to obtain better elimination of initial compounds and also …

Some Chemical Constituents From Marine Algae Of Karachi Coast (Arabian Sea), Muhammad Shaiq Ali, Viqar Uddin Ahmad, Farah Mahzar, Iqbal Azhar, Khan Usmanghani

Turkish Journal of Chemistry

Some commonly available marine algae have been collected from the Karachi coast of Arabian Sea for the search of new chemical constituents having biological importance. The structures of purified samples have been elucidated with the aid of modern spectroscopic techniques. Among the known constituents a new metabolite (1) has been isolated from the brown alga Iyengaria stellata.

Determination Of Patent Blue V And Carmoisine In Gelatine Desserts By Derivative Spectrophotometry, Yüksel Özdemi̇r, Ayşe Arzu Akkan

Turkish Journal of Chemistry

A first-derivative spectrophotometric method was developed for quantitative determination of two synthetic organic dyes, Carmoisine and Patent Blue V, which are under governmental regulations all over the world because of their toxicity and carcinogenity. In this study, Carmoisine and Patent Blue V were simultaneously determined in their binary mixtures by first-derivative spectrophotometry. The method was applied to different gelatine desserts. The first-derivative derivative method did not eliminate turbid background in the samples. A simple background correction procedure involving a C_{18}-cartridge sample preparation step was developed for determination of dyes in gelatine dessert by first-derivative spectrophotometry. The C_{18}-cartridge sample preparation step …

Conformational Analysis Of Linear Peptide (Glu^1-Leu^2-Leu^3-Gly^4-Gly^5-Arg^6-Phe^7nh_2 ), Lütfü Demi̇r, Abdulhali̇k Karabulut, Gökhan Budak, Yusuf Şahi̇n, Nagif Sefteroğlu

Turkish Journal of Chemistry

Conformational energy-minimization of the Sea Anemone and Sea Pansy neuropeptide Pol-RFamide (Glu^1-Leu^2-Leu^3-Gly^4-Gly^5-Arg^6-Phe^7-NH_2) was carried out by molecular mechanics (MM). The linkage bonds were characterized by the torsion angles \theta, \psi and \omega and the side groups were characterized by the torsion angles \chi_1, \chi_2, \chi_3\ldots The energy-map for each monopeptide of the Pol-RFamide I was drawn in the range of -180° to 180° with increments of 20°. Conformation facilities for monopeptides were determined from these maps. These results were used in the analysis of the dipeptide (Glu^1-Leu^2). Then, the (Glu^1-Leu^2-Leu^3) tripeptide was examined using the calculated results for the dipeptide. …

Chemical Investigation Of The Sponge Verongia Aerophoba, Zeynep Aydoğmuş, Nebi̇ye Ersoy, Sedat İmre

Turkish Journal of Chemistry

The solvent effect on Verongia aerophoba metabolites during the extraction and isolation processes were examined in this study. A major compound (6), a stereoisomer of fistularin-3, and a new compound (2) were isolated from the acetone extract of dried and ethanol extract of fresh V. aerophoba samples respectively. The structures of these metabolites were elucidated using spectroscopic methods.

Capillary Zone Electrophoresis Studies Of Sulfur Containing Compounds, Francisco Rodriguez

Masters Theses & Specialist Projects

Up to this point in time, complex mixtures of tertiary sulfonium ions have been separated or analyzed employing conventional methods like HPLC or NMR procedures. In this thesis the researcher presents a new approach, the use of Capillary Zone Electrophoresis (CZE) for the analysis of these types of ions as well as the closely related thiophenium ions. CZE offers an unprecedented advantage in that separations can be employed for speciation or quantitation of complex mixtures by using the appropriate standards or specific detectors. For the study, model sulfonium and thiophenium ions were used to determine the feasibility of the separation …

Phorbol 12-Myristate 13-Acetate Stimulates Lysophosphatidic Acid Secretion From Ovarian And Cervical Cancer Cells But Not From Breast Or Leukemia Cells, Zhongzhou Shen, Jerome Belinson, Richard E. Morton, Yan Xu

Chemistry Faculty Publications

Lysophosphatidic acid (LPA) is present in ascites from patients with ovarian cancer. It stimulates calcium release and growth of ovarian cancer cells bothin vitroandin vivo.Recently, we found that LPA levels were significantly elevated in plasma from patients with ovarian cancer and other gynecological cancers. In contrast, LPA levels were not elevated in patients with breast cancer and leukemias. In view of this, we investigated whether gynecological cancer cells could produce LPA. LPA was extracted from the supernatant of cells culturedin vitroand purified by thin layer chromatography. After hydrolysis and transmethylation, the fatty acid derivatives were analyzed by gas chromatography. We …

Principal Component Mapping Applied To Raman Microspectroscopy Of Fiber-Reinforced Polymer Composites, C. M. Stellman, K. S. Booksh, A. R. Muroski, M. P. Nelson, Michael L. Myrick

Faculty Publications

We describe the development and implementation of a spectroscopic Raman imaging system using Principal Component data analysis. Raman microspectroscopy followed by multivariate data analysis and principal component mapping has been used to investigate the spatial variations of chemical and physical properties at interfaces in glass-reinforced composites on the micrometer scale. A protocol for monitoring chemical and physical variances via multivariate statistics has been developed and a preliminary study of a "real world" glass-reinforced composite is presented. It is demonstrated that multivariate Raman imaging is more precisely interpretable than traditional univariate methods and that by appropriately choosing distinct spectral regions (such …

Nickel Subsulfide Can Protect Human Fibroblasts From The Mutagenic Effect Of Benzo[A]Pyrene Diolepoxide, Samir M. Hamdan

Masters Theses

Cancer researchers are interested in identifying the environmental causes and synergistic influences of different carcinogens. It is important to examine the combined effect of multiple carcinogens since this is a more realistic representation of the true environmental situation in which we are exposed daily. Our study has reported that pretreating human fibroblasts with nickel subsulfide followed by the simultaneous treatment with both nickel subsulfide and benzo[a]pyrene diolepoxide (BPDE) can protect human fibroblasts from the mutagenic effects of BPDE. These results correlate well with our previous chromium-BPDE co-treatment work, suggesting a transition metal dependent protective effect. This protective effect was dependent …

Process For Enhancing The Activity Of Amyloid Β Peptides, Kenneth Hensley, D. Allan Butterfield, John M. Carney, Michael Aksenov

Chemistry Faculty Patents

A novel process for enhancing activity of an oligopeptide or polypeptide comprising the steps of: providing an oligopeptide or polypeptide, dissolving the oligopeptide or polypeptide in an organic solvent, heating, removing the solvent, and recovering an oligopeptide or polypeptide with enhanced activity is disclosed. Also disclosed are novel oligopeptides and polypeptides enhanced by the process according the invention.

Dynamics Of Biomolecules: Assignment Of Local Motions By Fluorescence Anisotropy Decay, Carl N. Bialik, Barnabas Wolf, Edward L. Rachofsky, J. B. A. Ross, William Laws

Chemistry and Biochemistry Faculty Publications

Many biological systems have multiple fluorophores that experience multiple depolarizing motions, requiring multiple lifetimes and correlation times to define the fluorescence intensity and anisotropy decays, respectively. To simplify analyses, an assumption often made is that all fluorophores experience all depolarizing motions. However, this assumption usually is invalid, because each lifetime is not necessarily associated with each correlation time. To help establish the correct associations and recover accurate kinetic parameters, a general kinetic scheme that can examine all possible associations is presented. Using synthetic data sets, the ability of the scheme to discriminate among all nine association models possible for two …

Conserved Geometrical Base-Pairing Patterns In Rna, Neocles B. Leontis, Eric Westhof

Chemistry Faculty Publications

RNA molecules fold into a bewildering variety of complex 3D structures. Almost every new RNA structure obtained at high resolution reveals new, unanticipated structural motifs, which we are rarely able to predict at the current stage of our theoretical understanding. Even at the most basic level of specific RNA interactions – base-to-base pairing – new interactions continue to be uncovered as new structures appear. Compilations of possible non-canonical base-pairing geometries have been presented in previous reviews and monographs (Saenger, 1984; Tinoco, 1993). In these compilations, the guiding principle applied was the optimization of hydrogen-bonding. All possible pairs with two standard …

Monte Carlo Simulation Of An Ion-Dipole Mixture As A Model Of An Electrical Double Layer, Douglas Henderson, Dezso Boda, Kwong-Yu Chan

Faculty Publications

Canonical Monte Carlo simulations were performed for a nonprimitive model of an electrical double layer. The ions and the solvent molecules are modeled as charged and dipolar hard spheres, respectively, while the electrode as a hard, impenetrable wall carrying uniform surface charge. We found that the ion-dipole model gives a reasonable description of the double layer for partially charged ions with small to moderate dipole moments, or equivalently for an "effective" dielectric constant. Density, polarization and mean electrostatic potential profiles are reported. Strong layering structure, and at higher charges, charge inversion in the second layer were found. With appropriate choices …

Evaluation Of The Macrocyclic Antibiotic Avoparcin As A New Chiral Selector For Hplc, K. Helen Ekborg-Ott, John P. Kullman, Xiande Wang, Kyung Gahm, Lingfeng He, Daniel W. Armstrong

Chemistry Faculty Research & Creative Works

Avoparcin is a macrocyclic glycopeptide antibiotic structurally related to vancomycin, teicoplanin, and ristocetin A. When attached to 5-μm spherical silica gel, the avoparcin proved to be an effective chiral stationary phase (CSP) that could be used in the reversed-phase, normal- phase, and polar-organic modes. The avoparcin CSP was complimentary to the other macrocyclic glycopeptide CSPs in that it could resolve some racemates that the others could not, and vice versa. Some important compounds resolved on the avoparcin CSP include verapamil, thyroxine, mephenytoin, and 2- imidazolidone-4-carboxylic acid. The use of this CSP and the optimization of separations on it are discussed. …

Influence Of 5'-(Tg)1-3- And 3'-(Ac)1-3-Overhangs On The Thermodynamic And Na+ Binding Properties Of A Series Of Oligonucleotides, Enrique Dilone

Seton Hall University Dissertations and Theses (ETDs)

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