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Sickle Cell Anemia & Associated Neurological Complications: A Literature Review, Rodjmar Joseph Jan 2022

Sickle Cell Anemia & Associated Neurological Complications: A Literature Review, Rodjmar Joseph

Graduate Student Dissertations, Theses, Capstones, and Portfolios

Sickle cell anemia, an inherited disorder, causes red blood cells to contort into a disk or sickled shape becoming hard and sticky and obstructing blood flow. As the most common hemoglobinopathy, over 100,000 Americans in the US are affected by sickle cell disease. Sickle cell anemia is an inheritance of the abnormal sickle cell gene genetically transferred from both parents. Sickle cell anemia can be easily diagnosed in DNA through a blood test or genetic screening. With a 1 in 4 chance of inheriting copies of the sickle cell gene from both parents if both biological parents are carriers, the …

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Cultivation Of Industrial Hemp On And Near Airports: Implications For Wildlife Use And Risk To Aviation Safety, Bradley F. Blackwell, Page E. Klug, Lee A. Humberg, Zachary T. Brym, Bryan M. Kluever, Jennifer M. Edwards Jan 2022

Cultivation Of Industrial Hemp On And Near Airports: Implications For Wildlife Use And Risk To Aviation Safety, Bradley F. Blackwell, Page E. Klug, Lee A. Humberg, Zachary T. Brym, Bryan M. Kluever, Jennifer M. Edwards

Human–Wildlife Interactions

Land-use planning on and near airports should consider possible revenue from land covers, associated maintenance costs, and potential for land covers to attract vertebrate species recognized as hazardous to aviation safety. The U.S. Federal Aviation Administration has expressed interest in recent attention given to industrial hemp (Cannabis sativa L.; hemp) as a revenue-producing land cover that might be cultivated on or near airports. Our purpose was to better understand the potential production value of hemp as well as its possible role in affecting aviation safety if cultivated on or near airports. Our objectives were to: (1) review the literature …

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Industrial Hemp As A Resource For Birds In Agroecosystems: Human–Wildlife Conflict Or Conservation Opportunity?, Emily A. Kotten, Iona Hennessy, Bryan M. Kluever, Zachary T. Brym, Bradley F. Blackwell, Lee A. Humberg, Page E. Klug Jan 2022

Industrial Hemp As A Resource For Birds In Agroecosystems: Human–Wildlife Conflict Or Conservation Opportunity?, Emily A. Kotten, Iona Hennessy, Bryan M. Kluever, Zachary T. Brym, Bradley F. Blackwell, Lee A. Humberg, Page E. Klug

Human–Wildlife Interactions

Industrial hemp (Cannabis sativa L.; hemp) is an emerging crop in the United States with little known about bird use or the potential for birds to become an agricultural pest. We identified birds associated with hemp fields, using repeated visits to oilseed plots in North Dakota, USA (n = 6) and cannabinoid (CBD) plots in Florida, USA (n = 4) from August to November 2020. We did not control for plot area or density; our observations were descriptive only. We observed 10 species in hemp, 12 species flying over hemp, and 11 species both foraging in and …

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Using Image To Assist Students In Construct Searching Concepts And Framing Research Questions, Junli Diao Jan 2022

Using Image To Assist Students In Construct Searching Concepts And Framing Research Questions, Junli Diao

Open Educational Resources

No abstract provided.

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Anthropogenic Influences On The Decline, Restoration, And Eco-Evolutionary Dynamics Of Lake Superior’S Coaster Brook Trout, Austin Johnson Jan 2022

Anthropogenic Influences On The Decline, Restoration, And Eco-Evolutionary Dynamics Of Lake Superior’S Coaster Brook Trout, Austin Johnson

Dissertations, Master's Theses and Master's Reports

The coaster brook trout is a life history variant of the brook trout (Salvelinus fontinalis) that is characterized by either lake residency or migration between stream and lake habitats. Coaster brook trout were once widespread throughout Lake Superior and its tributaries, but populations declined sharply in the late 19th and early 20th centuries. Historically, brook trout were a popular target of recreational and subsistence fishing in the Lake Superior basin, and it has been hypothesized that angling pressure combined with multiple forms of industrial development are what drove the coaster brook trout’s decline. In the mid …

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Effects Of Mindfulness And Stress Management On Neurocardiovascular And Psychological Outcomes, Aditi P. Vyas Jan 2022

Effects Of Mindfulness And Stress Management On Neurocardiovascular And Psychological Outcomes, Aditi P. Vyas

Dissertations, Master's Theses and Master's Reports

There has been a higher prevalence of developing anxiety due to frequent episodes of stress among adults in recent years. Chronic anxiety can contribute to the prevalence of elevated blood pressure and hypertension. High anxiety and stress also contribute to overactivation of the sympathetic nervous system which can be quantified by increased muscle sympathetic nerve activity (MSNA). Sympathetic overactivation can lead to vasoconstriction and loss of arterial elasticity. Anxiety, MSNA, blood pressure, and arterial stiffness are all interconnected, thus studying these relationships is crucial to understand the underlying mechanisms for prevention and treatment of cardiovascular disease (CVD). Non-pharmacological and mind-body …

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Targeted Browsing With Goats For Eastern Redcedar (Juniperus Virginiana L.) Control, Alanna M. Hartsfield Jan 2022

Targeted Browsing With Goats For Eastern Redcedar (Juniperus Virginiana L.) Control, Alanna M. Hartsfield

Electronic Theses and Dissertations

As eastern redcedar (ERC) (Juniperus virginiana L.) grassland encroachment progresses, all potential control methods should be explored in the interest of Great Plains grassland health and longevity. Targeted browsing with goats has been proven as an effective control method on some juniper species; however, little is known about its ability to control ERC. These studies intend to mend knowledge gaps of how targeted browsing with goats control ERC by causing tree death without chemicals or machinery. The first study is two 3x3 Latin squares comparing protein-supplemented diets. The second study is a randomized complete block design of five 0.224 ha …

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Adoptive T-Cell Therapies To Overcome T Cell-Dependent Immune Dysregulations In Covid-19, Sevgi̇ Kalkanli Taş, Merve Sai̇de Uzunoğlu, Ayli̇n Seher Uzunoğlu, Duygu Kirkik, Derya Altunkanat, Nevi̇n Kalkanli Jan 2022

Adoptive T-Cell Therapies To Overcome T Cell-Dependent Immune Dysregulations In Covid-19, Sevgi̇ Kalkanli Taş, Merve Sai̇de Uzunoğlu, Ayli̇n Seher Uzunoğlu, Duygu Kirkik, Derya Altunkanat, Nevi̇n Kalkanli

Turkish Journal of Biology

Coronavirus disease 2019 (COVID-19) pandemic has been an important global interest that affected millions of people, and it requires a deep investigation of the disease immunology for developing further therapeutic applications. Adoptive T cell therapy promises to address T cell-dependent immune dysregulation in COVID-19 patients by the generation of specific T cell clones against virus-specific antigens. Additionally, targeting B cell-dependent protection through COVID-19 vaccines, which have been developed in the recent year, possessed sufficient prevention for spreading the virus, since the cases and deaths related to COVID-19 tend to decrease after the vaccination. However, adoptive cell therapies are now encouraging …

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The Comparison Of Differentially Expressed Micrornas In Bag-1 Deficient And Wild Type Mcf-7 Breast Cancer Cells By Small Rna Sequencing, Peli̇n Özfi̇li̇z Kilbaş, Gi̇zem Alkurt, Pinar Obakan Yerli̇kaya, Ajda Çoker Gürkan, Gi̇zem Di̇nler Doğanay, Eli̇f Damla Arisan Jan 2022

The Comparison Of Differentially Expressed Micrornas In Bag-1 Deficient And Wild Type Mcf-7 Breast Cancer Cells By Small Rna Sequencing, Peli̇n Özfi̇li̇z Kilbaş, Gi̇zem Alkurt, Pinar Obakan Yerli̇kaya, Ajda Çoker Gürkan, Gi̇zem Di̇nler Doğanay, Eli̇f Damla Arisan

Turkish Journal of Biology

The multifunctional BAG-1 (Bcl-2 athanogene-1) protein promotes breast cancer survival through direct or indirect interaction partners. The number of the interacting partners determines its cellular role in different conditions. As well as interaction partner variability, the amount of BAG-1 protein in the cells could cause dramatic alterations. According to previous studies, while the transient silencing of Bag-1 enhanced drug-induced apoptosis, deletion of BAG-1 could induce stemness properties and Akt-mediated actin remodeling in MCF-7 breast cancer cells. Considering the heterogeneity of breast cancer and the variability of BAG-1 -mediated cell response, it has become essential to determine microRNA (miRNA) functions in …

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Melatonin Ameliorates Cisplatin-Induced Neurodegeneration In Medulla Oblongata Through The Expressions Of Aqp-1,-4, Inflammation And Apoptosis Pathway Genes, Rahi̇me Özlem Öztopuz Jan 2022

Melatonin Ameliorates Cisplatin-Induced Neurodegeneration In Medulla Oblongata Through The Expressions Of Aqp-1,-4, Inflammation And Apoptosis Pathway Genes, Rahi̇me Özlem Öztopuz

Turkish Journal of Biology

In this study, the neuroprotective effects of melatonin (MEL) with changes in apoptosis, inflammation, and histopathological morphology were evaluated in the medulla oblongata of cisplatin (CIS) administered rats. Although the side effects of CIS are known in many tissues, its reaction on the medulla oblongata and the molecular association underlying this effect is unclear. Male wistar albino rats were separated into four groups (control, CIS, CIS+MEL, and MEL) (n = 24). CIS and CIS+MEL groups were given 4 mg/kg CIS at 4-day intervals (days 1, 5, 9, and 13) by the first day of the study. The MEL and CIS+MEL …

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Bone Marrow Mesenchymal Stem Cells Attenuate Lps-Induced Acute Lung Injury In Mice By Promoting Rve1/Prod1 And Modulating Treg/Th17 Balance, He-Bu Qian, Guijuan Zou, Chao Li, Qifang He, Jun Liu Jan 2022

Bone Marrow Mesenchymal Stem Cells Attenuate Lps-Induced Acute Lung Injury In Mice By Promoting Rve1/Prod1 And Modulating Treg/Th17 Balance, He-Bu Qian, Guijuan Zou, Chao Li, Qifang He, Jun Liu

Turkish Journal of Biology

Acute lung injury (ALI) and its severe form acute respiratory distress syndrome (ARDS) are respiratory failures caused by excessive alveolar inflammation with high mortality. In this study, we investigated the effects of bone marrow mesenchymal stem cells (BMSCs) on lung injury of lipopolysaccharide (LPS)-induced ALI and explored the associated mechanisms. BMSCs were isolated, cultured, identified by staining with CD34 and CD44 surface markers. LPS-induced ALI mouse model was generated by injecting with LPS and divided into ALI group and ALI+BMSCs group. Mice treated without any reagents were assigned as Control, mice transplanted with BMSCs were assigned as BMSCs group. Regulatory …

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Regulatory Roles Of An Atypical Ubiquitin Ligase Ube2o In Orphans Of Multi-Protein Complexes For Degradation, Yi Lv, Feiyue Xing Jan 2022

Regulatory Roles Of An Atypical Ubiquitin Ligase Ube2o In Orphans Of Multi-Protein Complexes For Degradation, Yi Lv, Feiyue Xing

Turkish Journal of Biology

UBE2O as an atypical ubiquitin-conjugating enzyme possesses an E2-E3 hybrid enzyme activity. It can regulate substrate levels or transcriptional activities by cooperating with other E3 ubiquitin ligases or forming homomeric complexes displaying intrinsic E2 and E3 activities. UBE2O controls the quality of cell proteome including protein degradation, modification, transport and location. Recent studies reveal that UBE2O plays a vital role in intracellular protein ubiquitination processes by regulating BMP/SMAD, TRAF/ NF-κB, mTOR/HIF1a and IL-1ß/IRAK4 signaling pathways, c-Maf stability and BAP1 subcellular location, which is proposed as a quality control supervisor of multiprotein complexes for degradation. Its abnormality leads to a variety …

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Developing A Label Propagation Approach For Cancer Subtype Identification Problem, Pinar Güner, Burcu Güngör, Mustafa Coşkun Jan 2022

Developing A Label Propagation Approach For Cancer Subtype Identification Problem, Pinar Güner, Burcu Güngör, Mustafa Coşkun

Turkish Journal of Biology

Cancer is a disease in which abnormal cells grow uncontrollably and invade other tissues. Several types of cancer have various subtypes with different clinical and biological implications. Based on these differences, treatment methods need to be customized. The identification of distinct cancer subtypes is an important problem in bioinformatics, since it can guide future precision medicine applications. In order to design targeted treatments, bioinformatics methods attempt to discover common molecular pathology of different cancer subtypes. Along this line, several computational methods have been proposed to discover cancer subtypes or to stratify cancer into informative subtypes. However, existing works do not …

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Development A Novel Multi-Epitope Dna Vaccine Against Human Sars Coronavirus-2: An Immunoinformatics Designing Study, Afshin Samimi Nemati, Sako Mirzaie, Mohammad Reza Masoumian, Fatemeh Sheikhi, Mostafa Jamalan Jan 2022

Development A Novel Multi-Epitope Dna Vaccine Against Human Sars Coronavirus-2: An Immunoinformatics Designing Study, Afshin Samimi Nemati, Sako Mirzaie, Mohammad Reza Masoumian, Fatemeh Sheikhi, Mostafa Jamalan

Turkish Journal of Biology

Human SARS coronavirus 2 (SARS-CoV-2) causes the current global COVID-19 pandemic. The production of an efficient vaccine against COVID-19 is under heavy investigation. In this study, we have designed a novel multiepitope DNA vaccine against SARS-CoV-2 using reverse vaccinology and DNA vaccine approaches. Applying these strategies led to reduce the time and costs of vaccine development and also improve the immune protective characteristics of the vaccine. For this purpose, epitopes of nucleocapsid, membrane glycoprotein, and ORF8 proteins of SARS-CoV-2 chose as targets for B and T-cell receptors. Accordingly, DNA sequences of selected epitopes have optimized for protein expression in the …

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Rgs1 Serves As An Anti-Tumor Target To Inhibit Proliferation Of Nicn87-Dr Cells And Tumor Growth In Gastric Cancer Mouse Model, Zhixiong Chen, Banglun Liu, Shouru Zhang, Lihui Chen, Yuyu Lv, Hao Sun Jan 2022

Rgs1 Serves As An Anti-Tumor Target To Inhibit Proliferation Of Nicn87-Dr Cells And Tumor Growth In Gastric Cancer Mouse Model, Zhixiong Chen, Banglun Liu, Shouru Zhang, Lihui Chen, Yuyu Lv, Hao Sun

Turkish Journal of Biology

Gastric cancer is becoming the 4th leading cause of cancer-associated death worldwide. The purpose of this study was to investigate the role of RGS1 in gastric cancer in vitro and in vivo. Proliferation, migration, invasion, and colony formation of NCIN87 cells and drug-resistant NCIN87 cells (NCIN87-DR) were determined. Cell apoptosis and cell cycle were examined using a flow cytometry assay. RGS1 gene knock-down vector (pLVshshRGS1) and Xenograft tumor mouse model was generated. RGS1 and epithelial-mesenchymal transition (EMT) associated markers, including E-cadherin (E-cad), N-cadherin (N-cad), Slug, and Vimentin were detected using a western blotting assay. Tumor size of Xenograft tumor mouse …

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Influence Of Aerobic Exercise Training On Mice Gut Microbiota In Parkinson's Disease, Tianlun Fan, Xiating Li, Xiang Zhang, Jing Zhang, Lichun Sun, Jingjing Chen, Chuan Fu Jan 2022

Influence Of Aerobic Exercise Training On Mice Gut Microbiota In Parkinson's Disease, Tianlun Fan, Xiating Li, Xiang Zhang, Jing Zhang, Lichun Sun, Jingjing Chen, Chuan Fu

Turkish Journal of Biology

Accumulating evidence shows that gut microbial dysbiosis may represent a risk factor for Parkinson's disease (PD). Exercise has a positive effect on microbiota in general. The effect of aerobic exercise training (AET) on the gut microbial environment in PD remains to be explored. Here, we performed the 16S rRNA gene sequencing on feces from sham operated-mice (sham), PD mice model, and mice receiving AET (AET). Results indicated that AET had no remarkable effect on species richness and bacterial diversity of PD mice. The relative abundance of the Bacteroidetes was reduced, while Firmicutes, Actinobacteria, Lactobacillaceae, Streptococcaceae, Lactobacillus, Streptococcus, Lactococcus, Lysinibacillus, Pelomonas, …

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Palmitic Acid Declines Glucose Uptake In Hepg2 Cells Via Modulating Phosphoglucomutase 1 To Repress Phosphatidylinositol 3 Kinase/Protein Kinase B And Jnk Pathways Via Inducing Microrna-124-3p, Linghui Zhang, Shengli Zhang Jan 2022

Palmitic Acid Declines Glucose Uptake In Hepg2 Cells Via Modulating Phosphoglucomutase 1 To Repress Phosphatidylinositol 3 Kinase/Protein Kinase B And Jnk Pathways Via Inducing Microrna-124-3p, Linghui Zhang, Shengli Zhang

Turkish Journal of Biology

Diabetes resulting from insufficient insulin secretion or insulin resistance (IR) is a highly prevalent metabolic disease. Since microRNAs have been linked with elevated IR, the current research hypothesized that miR-124-3p has a role in IR and the establishment of IR and type 2 diabetes (T2DM). The study aimed to explore the molecular mechanisms of miR-124-3p which influence IR leading to T2DM establishment. HepG2 cells were cultured in vitro, and palmitic acid (PA) was used to construct the IR cell model. In the IR model, transfection of miR-124-3p or phosphoglucomutase 1 (PGM1) linked plasmids were transfected into HepG2 cells. RT-qPCR was …

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Enlightening The Molecular Mechanisms Of Type 2 Diabetes With A Novel Pathway Clustering And Pathway Subnetwork Approach, Burcu Güngör, Mi̇ray Ünlü Yazici, Gökhan Göy, Mustafa Temi̇z Jan 2022

Enlightening The Molecular Mechanisms Of Type 2 Diabetes With A Novel Pathway Clustering And Pathway Subnetwork Approach, Burcu Güngör, Mi̇ray Ünlü Yazici, Gökhan Göy, Mustafa Temi̇z

Turkish Journal of Biology

Type 2 diabetes mellitus (T2D) constitutes 90% of the diabetes cases, and it is a complex multifactorial disease. In the last decade, genome-wide association studies (GWASs) for T2D successfully pinpointed the genetic variants (typically single nucleotide polymorphisms, SNPs) that associate with disease risk. In order to diminish the burden of multiple testing in GWAS, researchers attempted to evaluate the collective effects of interesting variants. In this regard, pathway-based analyses of GWAS became popular to discover novel multigenic functional associations. Still, to reveal the unaccounted 85 to 90% of T2D variation, which lies hidden in GWAS datasets, new post-GWAS strategies need …

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Demethylase Fto Inhibits The Development Of Prostate Cancer By Upregulating Egr2 Expression In An M6a Manner, Zhenyu Wang, Huami̇n Sun, Hua Zhu, Donghua Gu, Xi̇nfeng Chen, Yongsheng Pan, Bi̇ng Zheng, Dongrong Yang Jan 2022

Demethylase Fto Inhibits The Development Of Prostate Cancer By Upregulating Egr2 Expression In An M6a Manner, Zhenyu Wang, Huami̇n Sun, Hua Zhu, Donghua Gu, Xi̇nfeng Chen, Yongsheng Pan, Bi̇ng Zheng, Dongrong Yang

Turkish Journal of Biology

Fat mass and obesity-associated protein (FTO) is a demethylase and plays a vital role in various cancers. However, the regulation mechanism of FTO in prostate cancer (PCa) remains unclear. This study aimed to elucidate the mechanism of FTO in PCa. The function and mechanism of FTO-mediated in PCa were determined by gain-of-function assays and RNA-seq. We found that FTO expression in PCa tissues and two PCa cell lines were significantly lower than that in adjacent tissues and normal cell line. PCa cells after overexpression of FTO showed a significant lower in proliferation, migration, and invasion capabilities. RNA-seq displayed that FTO …

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Vars1 Mutations Associated With Neurodevelopmental Disorder Are Located On A Short Amino Acid Stretch Of The Anticodon-Binding Domain, Ayşe Semra Hiz, Seval Kiliç, Güney Bademci̇, Tülay Karakulak, Aybi̇ke Erdoğan, Burcu Özden Yücel, Çi̇ğdem Eresen Yazicioğlu, Şeri̇fe Esra Erdal Bağriyanik, Uluç Yi̇ş, Mustafa Teki̇n, Gökhan Karakülah, Ezgi̇ Karaca Erek, Mehmet Öztürk Jan 2022

Vars1 Mutations Associated With Neurodevelopmental Disorder Are Located On A Short Amino Acid Stretch Of The Anticodon-Binding Domain, Ayşe Semra Hiz, Seval Kiliç, Güney Bademci̇, Tülay Karakulak, Aybi̇ke Erdoğan, Burcu Özden Yücel, Çi̇ğdem Eresen Yazicioğlu, Şeri̇fe Esra Erdal Bağriyanik, Uluç Yi̇ş, Mustafa Teki̇n, Gökhan Karakülah, Ezgi̇ Karaca Erek, Mehmet Öztürk

Turkish Journal of Biology

Majority of 37 human aminoacyl tRNA synthetases have been incriminated in diverse, mostly recessive, genetic diseases. In accordance with this, we uncovered a novel homozygous valyl-tRNA synthetase 1 (VARS1) gene variant, leading to p.T1068M mutation. As in the previously reported VARS1 mutations, the affected individual harboring p.T1068M was experiencing a neurodevelopmental disorder with intractable seizures, psychomotor retardation, and microcephaly. To link this phenotypic outcome with the observed genotype, we structurally modeled human VARS1 and interpreted p.T1068M within the spatial distribution of previously reported VARS1 variants. As a result, we uncovered that p.T1068M is clustered with three other pathogenic …

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Inhibition Of Trpv4 Attenuates Ferroptosis Against Lps-Induced Ali Via Ca2+ Pathway, Junying Cai, Guohai Xu, Yue Lin, Bin Zhou, Zhenzhong Luo, Shuchun Yu, Jun Lu Jan 2022

Inhibition Of Trpv4 Attenuates Ferroptosis Against Lps-Induced Ali Via Ca2+ Pathway, Junying Cai, Guohai Xu, Yue Lin, Bin Zhou, Zhenzhong Luo, Shuchun Yu, Jun Lu

Turkish Journal of Biology

Acute lung injury (ALI) is an inflammation of the lungs with high incidence rate and mortality. Ferroptosis is a new cell death, which has influence in body organs. Transient receptor potential vanillin-4 (TRPV4) channel is a key mediator of Ca2+, its activation induces ferroptosis. The purpose of the study is to investigate the function of TRPV4 on ferroptosis in ALI mice induced by lipopolysaccharide (LPS). In vitro, the regulation of TRPV4 on Ca2+ and ferroptosis was detected by CCK-8, fluorescent probe, and western blot in BEAS-2B cells. In vivo, the role of TRPV4 antagonists on ALI mice …

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Scaffolds From Medical Grade Chitosan: A Good Choice For 3d Cultivation Of Mesenchymal Stem Cells, Merve Çapkin Yurtsever, Özge Eki̇n Akdere, Menemşe Gümüşdereli̇oğlu Jan 2022

Scaffolds From Medical Grade Chitosan: A Good Choice For 3d Cultivation Of Mesenchymal Stem Cells, Merve Çapkin Yurtsever, Özge Eki̇n Akdere, Menemşe Gümüşdereli̇oğlu

Turkish Journal of Biology

Chitosan has high biocompatibility, supports proliferation of many cells, and can be a good carrier for various growth factors. However, low attachment ratio and spheroid formation of several stem cell types on plain chitosan scaffolds/films is still a problem. In this study, it was aimed to obtain 3D scaffolds using medical grade chitosan (MC) with a high deacetylation degree (DD ≥ 92.6%) to overcome the spheroid formation of rat adipose tissue derived mesenchymal stem cells (rAdMSCs) on control chitosan (C, DD = 75%-85%) scaffolds. Genipin was used as a biological chemical crosslinker, and glycerol phosphate salt was used both as …

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Knockdown Of Death Receptor 5 Antisense Long Noncoding Rna And Cisplatin Treatment Modulate Similar Macromolecular And Metabolic Changes In Hela Cells, Di̇lek Cansu Gürer, İpek Erdoğan Vatansever, Çağatay Ceylan, Bünyami̇n Akgül Jan 2022

Knockdown Of Death Receptor 5 Antisense Long Noncoding Rna And Cisplatin Treatment Modulate Similar Macromolecular And Metabolic Changes In Hela Cells, Di̇lek Cansu Gürer, İpek Erdoğan Vatansever, Çağatay Ceylan, Bünyami̇n Akgül

Turkish Journal of Biology

Background/aim: Despite great progress in complex gene regulatory mechanisms in the dynamic tumor microenvironment, the potential contribution of long noncoding RNAs (lncRNAs) to cancer cell metabolism is poorly understood. Death receptor 5 antisense (DR5-AS) is a cisplatin inducible lncRNA whose knockdown modulates cell morphology. However, its effect on cell metabolism is unknown. The aim of this study is to examine metabolic changes modulated by cisplatin and DR5-AS lncRNA in HeLa cells. Materials and methods: We used cisplatin as a universal cancer therapeutic drug to modulate metabolic changes in HeLa cervix cancer cells. We then examined the extent of metabolic changes …

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The Role Of Slu7 In Spliceosome Function In Saccharomyces Cerevisiae, Sovira A. Chaudhry Jan 2022

The Role Of Slu7 In Spliceosome Function In Saccharomyces Cerevisiae, Sovira A. Chaudhry

Theses and Dissertations

The removal of introns from pre-messenger RNA via splicing in the nucleus is an essential step in gene expression. In recent decades, significant effort has been made to understand the chemical mechanisms of splicing reactions and the composition of the spliceosome that catalyzes them. Yet very little is known about the exact function of many splicing factors and small proteins within the spliceosome. Slu7, a pre-mRNA splicing factor, is essential during the second catalytic step of splicing because it interacts with several proteins and stabilizes the active site conformation. It has been found that Slu7 is involved in 3' splice …

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How Will The Expanding Agriculture Business Impact Wetland Graminoids?, Travis Darago Jan 2022

How Will The Expanding Agriculture Business Impact Wetland Graminoids?, Travis Darago

Williams Honors College, Honors Research Projects

As human population increases in the years to come so too will the agriculture business. We already know that the use of chemicals such as fertilizers and other agriculture chemicals aid to promote accelerated crop growth so that we can harvest the most food for the most people. There is less research on the effects that the runoff of these chemicals have on wetland environments that are downstream from farmland. I would like to explore how some of these agricultural chemicals, like ammonium, will affect the growth of different types of wetland graminoids. I will be looking at Poa polustris, …

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Conservation Of Lapping Mechanism In Marsupials, Angela Brkic Jan 2022

Conservation Of Lapping Mechanism In Marsupials, Angela Brkic

Williams Honors College, Honors Research Projects

The oral behavior of drinking includes interactions between the tongue, jaw, and liquid being ingested to provide hydration to the animal. Different mechanisms may be used to ingest liquid such as lapping, licking, or sucking. The objective of the study was to compare the mechanism of lapping across marsupial species through comparison of the length of gape cycle, and the amplitude of jaw pitch and tongue protraction between the two marsupial species, Didelphis virginiana and Monodelphis domestica. I hypothesized that there would be no differences in any of the variables for the lapping mechanism between species. Previous work demonstrates …

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Effect Of Glaucoma On Melanopsin Retinal Ganglion Cells In Mice, Abigail Mcmullen Jan 2022

Effect Of Glaucoma On Melanopsin Retinal Ganglion Cells In Mice, Abigail Mcmullen

Williams Honors College, Honors Research Projects

Within the mammalian retina, there are melanopsin-containing ganglion cells. These intrinsically photoreceptive cells help control behavioral aspects of vision as well as to aid in circadian rhythms. In this project, it will be determined whether or not glaucoma has an effect on these cells, and what that effect is, from different points in the disease. Glaucoma is an eye disease that damages the retinal ganglion cells and eventually causes them to die, also it can be linked to irregular circadian rhythm. Many techniques will be used to prepare this project but computer imaging will be the primary method for determining …

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The Effects Of Average Annual Temperature On Flowering Times And Flower Count, Angela Copploe Jan 2022

The Effects Of Average Annual Temperature On Flowering Times And Flower Count, Angela Copploe

Williams Honors College, Honors Research Projects

Over a course of 15 years, three different species of flowers were examined to see the relationship between the increase in average annual temperature, flowering time, and flower count.

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Immunohistochemistry Of The Zebrafish Retina, Alison Ruf Jan 2022

Immunohistochemistry Of The Zebrafish Retina, Alison Ruf

Williams Honors College, Honors Research Projects

The retina is made up of many different essential parts that work together to allow for vision of many different species. Some of these crucial cells and proteins include ganglion cells, bipolar cells, photoreceptors, synaptic markers, such as VGLUT, and receptors that bind glutamate. The basis of this project is to use immunohistochemistry to identify these important aspects of the retina in zebrafish via monoclonal and polyclonal antibodies. The goal being to compare specific cells in a control group retina to an experimental group of zebrafish.

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Impacts And Dispersal Of Invasive Bivalves, Dreissena And Corbicula Spp., On Stream Benthic Communities, Darrin Scott Hunt Jan 2022

Impacts And Dispersal Of Invasive Bivalves, Dreissena And Corbicula Spp., On Stream Benthic Communities, Darrin Scott Hunt

Wayne State University Dissertations

Asian clams (Corbicula spp.), zebra and quagga mussels (Dreisenna spp.) have invaded and spread throughout North American surface waters. Corbicula and Dreisenna species bio foul aquatic systems, occupy benthic substrates and degrade environments through shell deposition. I explored how Dreissena and Corbicula invasions affect benthic fish and macroinvertebrate communities, and examine how their impacts differ between urban and rural systems, and temperate and tropical climates. Macroinvertebrate and fish communities were evaluated at sites with increasing shell densities in the Rouge, and Huron rivers (MI, USA) using the United States Environmental Protection Agency’s Rapid Bioassessment Protocols (RBP). Urban and rural macroinvertebrate …

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