Digital Commons Network^™

Detection Of Lyme's Disease Caused By Borrelia Burgdorferi In Ixodes Scapularis Using A Pcr Multiplex And Real-Time Pcr, Emily T. Dittman, Bethany G. Basile

Research & Creative Achievement Day

Ixodes scapularis (deer ticks) are a vector for the bacterium Borrelia burgdorferi that is known to cause Lyme's Disease in animals and humans (Homo sapiens). In the past few years, there has been an increase in the prevalence of Lyme's Disease cases throughout the midwestern United States indicating that many ticks have been infected with B. burgdorferi. Using I. scapularis DNA samples collected from white-tailed deer (Odocoileus virginianus) in the spring of 2006 from Buffalo County, WI and Winona County, MN, both traditional and real-time PCR methods were used to test for the presence of the B. burgdorferi organism in …

Microbiological Study Of Used Cosmetic Products, Macy S. Priest, Rachel L. Przybilla

Research & Creative Achievement Day

The bacterial and fungal load in commercial creams and cosmetic products -was examined. This research aimed to identify pathogenic microbes, their toxin production, and their potential impact on product integrity. Our tests showed bacterial growth in the beauty products Cetaphil Facial Cleanser, CereVe moisturizing lotion, and Maybelline facial powder. Several microbes were characterized: a gram-positive bacteria identified as Bacillus cereus as well as an unknown gram-negative bacteria. In addition, the fungus Fusarium was observed. These microbes might be commonly observed in beauty products, but theoretically many different species of bacteria could grow in this type of environment.

Morphology Of Trematodes In Gadwall Ducks (Mareca Strepera) Found In The Mississippi Valley: Parasitology Class Project, Annika N. Lensch, Ethan B. Gjervik, Mckenna A. Baker, Elizabeth K. Haumont, Mivang Xiong

Research & Creative Achievement Day

Gadwall ducks (Mareca strepera) are commonly found in lakes, ponds, and marshes west of the Mississippi River in summer months. A Gadwall duck is considered a dabbler duck which feeds on aquatic plants floating on the water's surface occasionally feeding on insects, crustaceans (crayfish, crabs), and small fish. Trematodes are a commonly found parasite in the gastrointestinal tract of many species of ducks. The ducks used in this study were legally collected and donated by hunters from Buffalo City, Wisconsin along the Mississippi River. This study will focus on identifying trematodes found within Gadwall ducks such as Echinostoma, Zygocotyle, and …

Genetic Association In Entylia Carinata Using Random Forest Classification, Caden J. Harper

Research & Creative Achievement Day

The goal of this research was to identify locations in the genome of the Entylia carinata, known as the treehopper, that are associated with anomalous behavior exhibited by the species. Treehoppers are phytophagous insects and are shown to feed, reproduce, and rear their young on specific aster species. Observation has shown that the insects will disregard potential mates in close proximity in favor of those that originate from the same plant species as themselves. This behavior suggests genetic separation in the species based on plant nativity and warrants genetic analysis. Machine learning offers an effective genetic association technique due to …

Denial Of Pregnancy Or Cryptic Pregnancy, Nadia N. Shuriah, Elaine Mcfarland, Bethany Spenn, Kaisha Butz Mcmanus

BIO4960: Practicum in Biology I

Denial of pregnancy, or cryptic pregnancy, presents a complex situation where individuals are unaware of their pregnancy until the late stages of labor. This study delves into the multifaceted nature of concealed and denied pregnancies, exploring their prevalence, factors contributing to them, and their implications for both individuals and healthcare systems. By reviewing relevant literature and case studies, we aim to illuminate the difficulties healthcare providers face in identifying and managing cases of denial of pregnancy. Additionally, we stress the significance of proactive screening and comprehensive care to ensure the well-being of mothers and infants. This research endeavors to deepen …

Migratory And Non-Migratory Yellow Perch Differ In Locomotor Traits, Wade Poling

Honors Theses

Yellow Perch (Perca flavescens) are widely distributed throughout the Midwest and are popular game fish and table fare. Seasonally, some eastern Lake Michigan Yellow Perch migrate into drowned river mouth lakes. Drowned river mouths are highly productive environments that also hold non-migratory resident Yellow Perch. Migration requires substantial energy expenditure; therefore, we expected migratory Yellow Perch to evolve locomotory traits that optimize energy efficiency for swimming long distances. We expected drowned river mouth lake resident Yellow Perch to evolve locomotory traits that enhance maneuverability, which are beneficial in avoiding predators, capturing prey, and moving through the structurally complex littoral …

Mechanisms Of Rod Photoreceptor Metabolism And Function In Health And Disease, Tae Jun Lee

Arts & Sciences Graduate Student Theses and Dissertations

Over 250 million people globally live with visual acuity loss or blindness as an estimated 7 million people suffer from visual acuity loss in the United States. People in the United States value vision over memory, hearing, or speech and consider losing vision to be among the top four worst outcome to happen to them. The economic cost of major vision problems is estimated to increase to 373 billion dollars by the year 2050. Among the irreparable causes of vision loss, retinal degeneration stands as a chief contributor to catastrophic eye disease. The retina is a neurosensory tissue located in …

Metabolic Scaling Of Aquatic Macroinvertebrates, Jacob Woelber

Honors Thesis

The common assumption in regard to metabolic rate scaling with body size is the 3/4 law, which predicts a scaling exponent of 0.75 between log metabolic rate and log body size. Supporting evidence exists for this theory on a large, general scale. However, factors such as temperature, predation, and environment can cause the scaling exponent to deviate from 0.75. This paper takes a closer look at the effects of temperature and predation on metabolic rates via oxygen consumption in freshwater macroinvertebrate populations. To do this, 24 tanks were filled with water to allow natural populations of macroinvertebrates (predominantly Chironomidae) to …

Exploring The Longitudinal Effects: Non-Traditional Pedagogies And Practical Learning On Biology Education And Medical Understanding, Thomas Ziebro

Honors Projects

Medical disinformation is becoming a rampant problem in the United States, and the Covid-19 pandemic highlighted it. There have been attempts to fight the problem at the source through fact verification. These attempts have been unsuccessful. This paper investigates the efficacy of non-traditional pedagogies and the correlation between them and an individual perceived and practical ability to understand their primary care provider. The purpose of this research was to establish whether non-traditional pedagogies at the secondary and post-secondary level are more effective than traditional lecture-based instruction. The research was conducted through an anonymous cross-sectional survey which included questions about educational …

Germinal Center Persistence Diversifies B Cell Responses To Vaccination, Katherine Marie Mcintire

Arts & Sciences Graduate Student Theses and Dissertations

Vaccination is the best defense against infection, but highly variable and evolving pathogens like influenza virus pose a significant immunological challenge for vaccine design. An ideal influenza virus vaccine should elicit a durable and broadly cross-reactive antibody response. However, the development of cross-reactive antibodies is hindered by the high degree of antigenic variation among influenza viruses, particularly in the surface glycoprotein hemagglutinin (HA), which is the main target of vaccine-induced responses. Successful vaccination works by driving the differentiation of antigen-specific B cells into short-lived, antibody-secreting plasmablasts (PBs) and long-lived populations of memory B cells (MBCs) and bone marrow plasma cells …

Annotation Of Hypothetical Genes In Lactococcus Lactis Ssp. Il403, Jennifer A. Tangires

Student Scholar Showcase

The human gastrointestinal tract (GIT) harnesses various microbial organisms involved in almost all processes of physiological homeostasis, among these are lactic acid bacteria (LAB). These bacteria, almost all of which belong to the order Lactobacillales, are able to produce lactic acid, and play an important role in food preservation because they produce bacteriocins. Bacteriocins are antimicrobial proteins that are used to fight off related bacteria in their environment that are competing for the same resources. This study focuses on a specific LAB strain, Lactococcus lactis ssp. IL1403 where 21.9% of its predicted genes have not yet been assigned a function. …

Sharpnose (Rhizoprionodon Terraenovae) Jaw, Juliana N. Ottens-Rivera, Fiona Smith, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from 76cm total length (TL) Rhizoprionodon genus (Sharpnose), collected from Anglers Bait & Tackle on Feb 5th, 2024, by Juliana Ottens-Rivera

Exploring Racial And Ethnic Disparities In Alzheimer's Disease And Related Dementias: Prevalence, Healthcare Utilization, And Costs, Michael E. Myers Ii

Doctoral Dissertations and Projects

Objective: This study aims to investigate the disparities in prevalence rates, healthcare utilization patterns, and healthcare costs associated with Alzheimer’s Disease and Related Dementias (ADRD) among various racial and ethnic groups over time. Methods: Utilizing data from the medical expenditure panel survey over a five-year period, this study employs factorial logistic regression to analyze ADRD prevalence rates and multivariate analysis of variance to examine healthcare utilization and costs. The analysis focuses on weighted populations to account for the representation of racial and ethnic groups, ensuring the generalizability of the findings. Results: The study identifies statistically significant disparities in ADRD prevalence, …

Expression Of Human Arginine Vasopressin In Arabidopsis And Assessment Of Abiotic Stress Tolerance, Maitha Salem Aldarmaki

Thesis/ Dissertation Defenses

Human Arginine Vasopressin (HsAVP) is a nona-peptide that acts as an antidiuretic hormone. In human AVP regulates water permeability through the regulation of the water channel, aquaporin 2. The process begins with the binding of vasopressin to V2 receptor which activates cAMP-dependent protein kinase A (PKA). PKA phosphorylates aquaporin-2 at Ser256 and allows the aquaporin-2- containing vesicle to fuse with the apical membrane which increases water permeability. The present study describes the functional analysis of the codon-optimized HsAVP overexpressed in Arabidopsis thaliana. The main objective of the study is to assess if HsAVP affects drought and salinity stress tolerance of …

Age Estimation And Validation In Otoliths, Spines, And Fin Rays From Four Central Texas Fishes, Meredith B. Pfennig, Derek P. Crane, Nate G. Smith, Dave L. Buckmeier

Biology

Age estimation methods have not been validated for many species. Thus, we focused this age estimation study on four species from central Texas: the Guadalupe Bass Micropterus treculii, Channel Catfish Ictalurus punctatus, Gray Redhorse Moxostoma congestum, and Redbreast Sunfish Lepomis auritus. Our objectives for each species were to (1) investigate whether increments form annually in otoliths, fin rays, or spines; (2) determine the seasonal timing of zone deposition in each calcified structure; and (3) compare age estimates between otoliths and fin rays or spines.

Fish were sampled from central Texas waters and injected with oxytetracycline (OTC) quarterly in 2021. In …

Veterinarian Perception Of The Impact Of Covid-19 On The Mortality Of Pets, Jason Bainbridge

Honors Theses

The pandemic led to many changes in society, changes that may have affected pets either directly or indirectly from the new way people had to live life. The primary variable of investigation is if the changes were significant enough to affect pets enough to see a trend in mortality. This thesis used a survey, sent out to veterinarians for their perspective, to see the effects the pandemic had on the mortality of pets, as well as any secondary variables. This survey had 38 responses, with 34 being eligible to complete the survey. The survey did not obtain the information of …

Ammonium Chemotaxis In Chlamydomonas Reinhardtii, Gabela Nelson

LSU Doctoral Dissertations

Analysis of ammonium chemotaxis in Chlamydomonas reinhardtii is largely hindered, compared to that of phototaxis, despite equal importance on flagellated microalgal physiology. A major contribution of this shortfall is the lack of proper assay method. We developed a simple Petri dish assay method in which light is homogenously exposed while patterns of the cellular migration are tracked with a function of time. Using the method, new findings were revealed. First, this research presented that a strain lacking the eyespot organelle required for light gradient-sensing exhibits similar chemotactic behavior compared to a wild-type strain, suggesting Chlamydomonas sense an ammonium gradient not …

Increasing The Phytoremediation Efficiency Of Heavy Metal-Contaminated Soils In The Uae Using Endophytic Actinobacteria For Sustainable Agriculture, Archana Mathew Mathai

Thesis/ Dissertation Defenses

Pollution caused by heavy metals (HMs) is a major environmental concern worldwide. Human actions, agriculture practices and industrial activities can cause the release of HMs into the environment. Soil contamination with HMs may have negative effects on crops, thus disrupting the food chain and posing risks to human health. Lead (Pb) is a common pollutant found in soils when at high concentrations. Conventional land remediation techniques depending on chemical and mechanical methods are quite expensive and would lead to long-term deterioration of the ecosystems. Phytoremediation can serve as an alternative, eco-friendly approach to restore the lands for agricultural purposes. Hyperaccumulator …

Unravelling The Genetic Basis Of Schizophrenia, Clara Casey, John F. Fullard, Roy D. Sleator

Department of Biological Sciences Publications

Neuronal development is a highly regulated mechanism that is central to organismal function in animals. In humans, disruptions to this process can lead to a range of neurodevelopmental phenotypes, including Schizophrenia (SCZ). SCZ has a significant genetic component, whereby an individual with an SCZ affected family member is eight times more likely to develop the disease than someone with no family history of SCZ. By examining a combination of genomic, transcriptomic and epigenomic datasets, large-scale ‘omics’ studies aim to delineate the relationship between genetic variation and abnormal cellular activity in the SCZ brain. Herein, we provide a brief overview of …

The Descent Of Anolis: Assemblages, Convergence, And Ecomorphological Evolution, Christopher G. Anderson

Biology ETDs

The evolutionary outcomes we observe in modern organisms, particularly associations between phenotypes and environments, have been and remain an invaluable tool in interpreting the biological phenomena that shape our world. In the following chapters, I leverage a comprehensive phylogenetic and morphological dataset for 351 species comprising a diverse group of arboreal lizards, the Anolis clade, to explore how communities and morphologies evolve. First, I characterized patterns among coexisting lineages of Anolis to reveal a general pattern of phylogenetic relatedness among lineages comprising assemblages and identify differences attributable to a biogeographic variable. Then I examined the morphological consequences associated with the …

Investigating The Antibacterial Properties Of Nanostructured Aluminum Surface, Quinshell Smith

Theses and Dissertations

Bacterial infections are a major public health concern. Bacterial infection can occur in any part of the body and can also cause the body to respond to its presence. Bacteria can be transferred to humans through water, food, air, and living vectors. The modes of transmission for bacterial infections are vectors, airborne, physical contact, and droplets. Current preventative measures have been put in place to combat this issue. These preventative measures include immunization of both animals and humans, personal hygiene measures, biocidal agents, and essential oils. Bacterial resistance has occurred due to these preventative measures being misused and overused. Bacteria …

An Exploration Of The Effectiveness Of Xanthorrhiza Simplicissima And Its Secondary Alkaloids As Antibiotics Against Staphylococcus Aureus With The Use Of Reserpine, Donald Bothe, Savita Chaurasia

Undergraduate Theses

Xanthorhiza simplicissima is a plant that is steeped in medical history. It has been used for hundreds of years by the Native Americans, and later by the Europeans, of Appalachia for its medicinal properties. One of the most useful medical applications of this plant are its antibiotic properties, as typified by its use as a tea that was consumed to treat mouth sores. These antibiotic properties can be attributed to some of its secondary alkaloids such as berberine, liriodenine, oxyacanthine, and magnoflorine. These compounds have been studied in other systems; however, oxyacanthine and magnoflorine have not been researched in tandem …

Comparative Genomics Of Selected Lactobacillus Helveticus Strains, Cain Petty

Undergraduate Research Conference

My research is to compare two strains (D76 and H10) of Lactobacillus helveticus and a shared gene between them. I would want to experiment with overexpression to test for any difference in the regulatory function of genes associated with CggR - the central glycolytic genes regulator. The poster I am presenting would outline this and provide a clearer understanding of genes and potential overexpression.

Bec-1 Survey Of Parasites In Ictalurus Punctatus (Channel Catfish) Of The Savannah River Basin At Little River In Mccormick, South Carolina, Savannah Cade, Jason Lee

SC Upstate Research Symposium

Ictalurus punctatus, more commonly known as the Channel Catfish, is common throughout the Savannah River Basin. Fifteen specimens were captured by hook and line from the Little River in McCormick County, South Carolina. The gills and viscera were examined for metazoan parasites and prevalence and mean intensity were computed. The monogenean Ligictaluridus pricei and the copepod Ergasilus arthrosis were recovered from the gills. Two digenetic trematodes (Megalonia ictaluri and Alloglossidium corti), one tapeworm (Corallobothrium fimbriatum), two nematodes (Camallanus oxycephalus and Spinitectus carolini) and one acanthocephalan (Neoechinorhynchus cylindratus) were recovered from the …

Hgs-3 The Influence Of A Tandem Cycling Program In The Community On Physical And Functional Health, Therapeutic Bonds, And Quality Of Life For Individuals And Care Partners Coping With Parkinson’S Disease, Leila Djerdjour, Jennifer L. Trilk

SC Upstate Research Symposium

Purpose Statement: Several studies have shown that aerobic exercise can have a positive impact on alleviating symptoms experienced by individuals with Parkinson's disease (PD). Despite this evidence, the potential benefits of exercise for both PD patients and their care partners (PD dyad) remain unexplored. This research project investigates the effectiveness, therapeutic collaborations, and physical outcomes of a virtual reality (VR) tandem cycling program specifically designed for PD dyads.

Methods: Following approval from the Prisma Health Institutional Review Board, individuals with PD were identified and screened by clinical neurologists. The pre-testing measures for PD dyads (N=9) included emotional and cognitive status …

Effects Of Delayed Hca Exposure On A Rat Model Of Bipolar Disorder, Eden Comer, Natalie Olander

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Bipolar disorder (BD) is a neuropsychological disorder featuring cyclical periods of depressive and manic behaviors. The Chase lab aims to develop a reliable animal model for BD in order to characterize its critical neurological triggers. Previous work has shown that daily injection of rat pups from postnatal day 3 through 19 (P3-P19) with homocysteic acid (HCA) produces a mixed manic and depressive state after puberty. These behaviors can be reversed by lithium treatment and involve changes in gene expression in the prefrontal cortex that are also improperly regulated in BD. Despite this model's reproducibility, we observed critical changes in the …

The Behavioral Impacts Of Iron Oxide Nanoparticle Exposure On The House Sparrow (Passer Domesticus), John Wenderski, Brooke Fox, Jacob Bergstrom, Olivia Sprys-Tellner, Peyton Hallemann, Sarah Grimes

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

In response to a rapidly growing world population, there has been a dramatic increase in global urbanization and industrialization. With these increases comes increased air pollution, which includes metallic nanoparticles that are small enough to pass through an animal’s blood-gas and blood-brain barriers and cause damage. Some animals show behavioral changes in response to metallic nanoparticle exposure; for example, zinc oxide nanoparticle-exposed chicks displayed less antipredator behavior compared to controls. Additionally, mice injected with silver traveled less and more slowly than controls. Observationally, urban birds, compared to their rural conspecifics, tend to take more risks and explore more, which are …

Environment And Sexual Expression: Hormone-Induced Sex Change In Sexually Plastic Trees, Jillian Hickok, Colin Kalkman, Michael Laporte, Arsh Mir, Samantha Weaver

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

In a small number of species, plant sex expression is an environmentally determined characteristic and can change throughout the organism’s lifetime. This plastic response to environmental changes has important and intrinsically interesting ecological and evolutionary implications, but is as yet an understudied phenomenon. In particular, little is known about the proximate hormonal cues that mediate plastic sex determination. This study examines the impact of selective hormonal treatment on sex expression in a sexually plastic tree species, Acer Pensylvaticum, with the aim of further elucidating this idiosyncratic process. Live A. pensylvanicum twig samples were taken from five trees in Sleeping …

Understanding The Role Of Serine 26 Phosphorylation Changes In Peroxidemediated Trafficking Of System XC- To The Cell Membrane, Katherine Lane

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Composed of xCT and 4F2HC, System x_c^- is involved in importing cystine and exporting glutamate from the cell. xCT is directly involved in cystine-glutamate transport, and 4F2hc is responsible for stabilizing and moving xCT onto the cell membrane. Previous studies found that phosphorylating serine 26 (S26) on xCT inhibits xCT activity by moving system x_c^- off the cell membrane into lysosomes to be degraded (Figure 1). A previous study by the Chase lab showed that treating COS7 cells with hydrogen peroxide (H2O2) led to significantly higher amounts of xCT on the cell membrane. The objective of …

Investigating Auditory And Visual Seasonality In House Finches, Ashley Lauraine, Hannah Peterson, Jordan Winters

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Many birds receive both visual and auditory signals in mate selection, such as plumage color and song differences within conspecifics, which has implications for behavioral and communication processes. This processing of stimuli from different systems as a combined signal is also known as multimodal sensory processing. Sex hormone levels correlating with reproduction efforts vary seasonally in temperate animals, leading to changes in sensory processing as well. As the seasons progress, sex hormones (i.e. estrogen and testosterone) fluctuate, and an increase or decrease in these hormones has shown an impact on hearing in songbird species, however, less is known about the …