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Effect Of Nestling Sex Ratio On The Provisioning Behavior Of Adult Eastern Bluebirds (Sialia Sialis), Barbara Ellen Kieffer

Online Theses and Dissertations

To maximize reproductive success, parents may, in some cases, differentially invest in sons and daughters, i.e., sex-biased parental investment. Preferential provisioning behavior has been reported in one population of Eastern Bluebirds (Sialia sialis) and attributed to local resource competition. To better understand this behavior, I studied the provisioning behavior of Eastern Bluebirds in Madison County, Kentucky, in 2004. I experimentally manipulated brood sex ratios in 24 bluebird nests, creating female-biased (N = 8), male-biased (N = 5), and control (N = 11) nests. Following manipulation, nests were video-taped to record adult provisioning behavior. Among experimental broods, the provisioning rates …

The Effect Of Mycorrhizal Inoculation Prior To Transplantation On Wetland Restoration Success In Sites Of Different Land Use Histories, Brett Joseph Fisher

Browse all Theses and Dissertations

One factor used to determine wetland mitigation success is the establishment of native wetland plant species. Although mycorrhizal associations are known to be present in 70 to 95% of all plant species and have been linked to seedling establishment as well as nutrient and carbon flux within plant communities, the presence or absence of mycorrhizal fungi are not assessed or addressed during wetland mitigation work. Three experiments were devised to examine the effects of mycorrhizal fungi on the germination and growth of native wetland plant species in soils and field sites from natural, restored, and created wetlands.

Greenhouse experiment I …

Vapc6, A Ribonucleolytic Toxin Regulates Thermophilicity In The Crenarchaeote Sulfolobus Solfataricus, Yukari Maezato, Amanda Daugherty, Karl Dana, Edith Soo, Charlotte Cooper, Sabrina Tachdjian, Robert M. Kelly, Paul H. Blum

School of Biological Sciences: Faculty Publications

The phylum Crenarchaeota includes hyperthermophilic micro-organisms subjected to dynamic thermal conditions. Previous transcriptomic studies of Sulfolobus solfataricus identified vapBC6 as a heat-shock (HS)-inducible member of the Vap toxin– antitoxin gene family. In this study, the inactivation of the vapBC6 operon by targeted gene disruption produced two recessive phenotypes related to fitness, HS sensitivity and a heat-dependent reduction in the rate of growth. In-frame vapBC6 deletion mutants were analyzed to examine the respective roles of each protein. Since vapB6 transcript abundance was elevated in the vapC6 deletion, the VapC6 toxin appears to regulate abundance of its cognate antitoxin. In contrast, vapC6 …

Maize Cellulosic Biofuels: Soil Carbon Loss Can Be A Hidden Cost Of Residue Removal, Amy Kochsiek, Johannes Knops

School of Biological Sciences: Faculty Publications

Second generation biofuels, like cellulosic ethanol, have potential as important energy sources that can lower fossil fuel carbon emissions without affecting global food commodity prices. Agricultural crop residues, especially maize, have been proposed for use as biofuel, but the net greenhouse warming effect of the gained fossil fuel carbon offset needs to account for any ecosystem carbon losses caused by the large-scale maize residue removal. Using differential 13C isotopic ratios between residue and soil in an incubation experiment, we found that removal of residue increased soil organic matter decomposition by an average of 16%, or 540–800 kg carbon ha -1. …

Aphids: A Model For Polyphenism And Epigenetics, Dayalan G. Srinivasan, Jennifer A. Brisson

School of Biological Sciences: Faculty Publications

Environmental conditions can alter the form, function, and behavior of organisms over short and long timescales, and even over generations. Aphid females respond to specific environmental cues by transmitting signals that have the effect of altering the development of their offspring. These epigenetic phenomena have positioned aphids as a model for the study of phenotypic plasticity. The molecular basis for this epigenetic inheritance in aphids and how this type of inheritance system could have evolved are still unanswered questions. With the availability of the pea aphid genome sequence, new genomics technologies, and ongoing genomics projects in aphids, these questions can …

Healthy Choices; Preferential Foraging Of Insects Within Senescent, But Nutrient-Rich, Tropical Flowers., Amie Whigman

Dissertations and Theses

No abstract provided.

Physiology And Biochemistry Of The Tropical Seagrass Thalassia Testudinum In Response To Hypersalinity Stress And Labyrinthula Sp. Infection, Stacey Marie Trevathan-Tackett

UNF Graduate Theses and Dissertations

Seagrass meadows are essential to coastal ecosystems and have experienced declines in abundance due to a series of environmental stressors including elevated salinity and incidence of disease caused by the pathogen Labyrinthula sp. This thesis evaluated the dynamics between T. testudinum and Labyrinthula concerning the impacts of short term elevated salinity stress on the early stages of infection in Thalassia testudinum (Chapter 2) as well as the presence of anti-labyrinthulid secondary metabolites produced by the tropical seagrass (Chapter 3). The results showed that short term exposure to hypersalinity alters some cellular processes but does not necessarily lead to an immediate …

Implications Of Bias In Conservation Research And Investment For Freshwater Species , William Darwall, R Holland, K Smith, D Allen, E Brooks, V Katarya, C Pollock, Y Shi, Viola Clausnitzer, Neil Cumberlidge, A Cuttelod, K D. Dijkstra, M Diop, N Garcia, M Seddon, P Skelton, J Snoeks, D Tweddle, Jc Vie

Journal Articles

No abstract provided.

Analyses Of Fruit Flies That Do Not Express Selenoproteins Or Express The Mouse Selenoprotein, Methionine Sulfoxide Reductase B1, Reveal A Role Of Selenoproteins In Stress Resistance, Valentina A. Shchedrina, Hadise Kabil, Gerd Vorbruggen, Byung Cheon Lee, Anton A. Turanov, Mitsuko Hirosawa- Takamori, Hwa- Young Kim, Lawrence G. Harshman, Dolph L. Hatfield, Vadim N. Gladyshev

School of Biological Sciences: Faculty Publications

Selenoproteins are essential in vertebrates because of their crucial role in cellular redox homeostasis, but some invertebrates that lack selenoproteins have recently been identified. Genetic disruption of selenoprotein biosynthesis had no effect on lifespan and oxidative stress resistance of Drosophila melanogaster. In the current study, fruit flies with knock-out of the selenocysteine-specific elongation factor were metabolically labeled with ⁷⁵Se; they did not incorporate selenium into proteins and had the same lifespan on a chemically defined diet with or without selenium supplementation. These flies were, however, more susceptible to starvation than controls, and this effect could be ascribed to the …

Altered Leptin Signaling On Dendritic Cells As A Potential Mechanism For Cancer Immunotherapy, Lorena Y. De Los Santos

Open Access Theses & Dissertations

Leptin is a pleiotropic hormone synthesized primarily by white adipocytes and its receptors are expressed in a variety of tissues and cells such as in the hypothalamus and cells of the immune system. Multiple cell types can produce a considerable amount of leptin such as skeletal muscle, placenta, and osteoblasts to name a few and its synthesis has been shown to be regulated by sex hormones and a broad range of inflammatory mediators. Although leptin has been shown to directly affect immune response, we are interested in how leptin affects dendritic cell function and their ability to induce a proper …

Nutritional Properties Of The Invasive Lionfish: A Delicious And Nutritious Approach For Controlling The Invasion, James A. Morris, Jr., Amber Thomas, Andrew L. Rhyne, Nancy Breen E. Breen, Lad Akins, Barry Nash

Arts & Sciences Faculty Publications

Lionfish, Pterois volitans and P. miles, are native to the Indo-Pacific and have recently invaded the Western Atlantic Ocean. Strategies for control of this invasion have included limited removal programs and promotion of lionfish consumption at both local and commercial scales. We demonstrate that lionfish meat contains higher levels of healthy n-3 fatty acids than some frequently consumed native marine fish species. Mean lionfish fillet yield was 30.5% of the total body wet weight, a value that is similar to that of some grouper and porgy species. A sensory evaluation indicated that lionfish meet the acceptability threshold of most consumers.

Genetic, Morphological And Ecological Relationships Among Populations Of The Clam Shrimp, Caenestheriella Gynecia, Jonelle Orridge

Dissertations, Theses, and Capstone Projects

Little is known about the ecology of the clam shrimp, Caenestheriella gynecia. Caenestheriella gynecia was first discovered in 1939 in a single pool in Oxford, Ohio. Schmidt and Kiviat (2007) reported four new localities of C. gynecia in New York and New Jersey, three within the Hudson Valley of New York and one in northeastern New Jersey. Caenestheriella gynecia may have originated from a very small founder population due possibly to unusual dispersal vectors from its natural range to the west, in Ohio. Egg samples and hatched individuals were obtained from all study sites and specimens were raised in …

Novel Insights Into The Biotin Carboxylase Domain Reactions Of Pyruvate Carboxylase From Rhizobium Etli, Tonya N. Zeczycki, Ann L. Menefee, Abdussalam Adina-Zada, Sarawut Jitrapakdee, Kathy H. Surinya, John C. Wallace, Paul V. Attwood, Martin St. Maurice, W Wallace Cleland

Biological Sciences Faculty Research and Publications

The catalytic mechanism of the MgATP-dependent carboxylation of biotin in the biotin carboxylase domain of pyruvate carboxylase from R. etli (RePC) is common to the biotin-dependent carboxylases. The current site-directed mutagenesis study has clarified the catalytic functions of several residues proposed to be pivotal in MgATP-binding and cleavage (Glu218 and Lys245), HCO3 − deprotonation (Glu305 and Arg301), and biotin enolization (Arg353). The E218A mutant was inactive for any reaction involving the BC domain and the E218Q mutant exhibited a 75-fold decrease in kcat for both pyruvate carboxylation and the full reverse reaction. The E305A mutant also showed a 75- and …

The Role Of The Nr4a Orphan Nuclear Receptor Nor1 In Vascular Cells And Atherosclerosis, Yue Zhao

University of Kentucky Doctoral Dissertations

The neuron-derived orphan receptor 1 (NOR1) belongs to the NR4A nuclear receptor subfamily. As an immediate early response gene, NOR1 is rapidly induced by a broad spectrum of physiological and pathological signals. Functional studies demonstrate NOR1 as a constitutively active ligand-independent nuclear receptor whose transcriptional activity is dependent on both expression level and posttranslational modifications. To date, an increasing number of studies have demonstrated a pivotal role of NOR1 in the transcriptional control of metabolism and the development of cardiovascular diseases.

In this dissertation, we demonstrate NOR1 expression in endothelial cells and sub-endothelial cells of human atherosclerotic lesions. In response …

Genome-Wide Detection Of Novel Regulatory Rnas In E. Coli, Rahul Raghavan, Eduardo Groisman, Howard Ochman

Biology Faculty Publications and Presentations

The intergenic regions in bacterial genomes can contain regulatory leader sequences and small RNAs (sRNAs), which both serve to modulate gene expression. Computational analyses have predicted the presence of hundreds of these noncoding regulatory RNAs in Escherichia coli; however, only about 80 have been experimentally validated. By applying a deep-sequencing approach, we detected and quantified the vast majority of the previously validated regulatory elements and identified 10 new sRNAs and nine new regulatory leader sequences in the intergenic regions of E. coli. Half of the newly discovered sRNAs displayed enhanced stability in the presence of the RNA-binding protein …

Phenolic Constituents From Garcinia Intermedia And Related Species, Ulyana Muñoz Acuña

Dissertations, Theses, and Capstone Projects

Antioxidants from plants scavenge free radicals and prevent reactive oxygen species from having damaging effects in common ailments such as inflammation, atherosclerosis, and Alzheimer’s disease. As part of our ongoing studies of antioxidants from tropical edible fruits, we have studied Garcinia intermedia (Pittier) Hammel [synonym: Rheedia edulis (Seem.) Planch. & Triana], native to Central America. In the fruits the following compounds were identified: guttiferone A, guttiferone E, xanthochymol, fukugetin, volkensiflavone and fukugeside. A new compound was tentatively identified in the fruits of this species. The antioxidant activity of guttiferone A in the 1,1-diphenyl-2-picrylhydrazyl (DPPH) assay was IC50 = 46 μM. …

Optimized Production Of Lignin Peroxidase, Manganese Peroxidase And Laccase In Submerged Cultures Of Trametes Trogii Using Various Growth Media Compositions, F. Patrick, G. Mtui, A. M. Mshandete, A. Kivaisi

Tanzania Journal of Science

A white-rot fungus, Trametes trogii, was isolated from coastal Tanzania and screened for crude lignolytic enzymes production using Rhemazol Brilliant blue R (RBBR) dye, 2,2-azino-bis (3-ethylbenzthiazoline)-6-sulfonate (ABTS) and guaiacol in a semi-solid medium. Lignin peroxidase (LiP), manganese peroxidase (MnP) and Laccase (Lac) were detected by pyrogallol and !- napthol solutions, respectively on the guaiacol supplemented solid media. The effect of temperature, pH, carbon, nitrogen, Cu2+, 2,5-xylidine, ferulic acid, varatryl alcohol and Mn2+ in submerged culture fermentations were investigated for maximum enzymes production. After 7 days of incubation, 72-100% oxidation of RBBR, ABTS and guaiacol was observed. With optimized culture conditions, …

Urban Dietary Heavy Metal Intake From Protein Foods And Vegetables In Dar Es Salaam, F. N. Ngassapa, O. C. Othman, E. Elisante

Tanzania Journal of Science

Contamination of food and food products by heavy metals has made dietary intake as one of the major routes of these harmful elements to human beings. The human dietary intake of heavy metals cadmium, copper, lead and zinc from protein-foods (beans, meat, fish, milk) and green vegetables consumed daily from restaurants and street food-vendor kiosks in Dar es Salaam were determined using the Total Diet Study (TDS) method. The cooked food was bought from the restaurants and street food-vendors at several city locations (i.e. Buguruni, Manzese, Mwenge, Temeke and Ubungo) over several months and analyzed. Heavy metal concentrations were determined …

Development Of A Methodology To Attain High Levels Of Storage Proteins In Cassava Tuberized Roots And Its Implications, Mohammad Abhary

Dissertations

Cassava (Manihot esculenta Crantz.) is a member of the Euphorbiaceae family, cultivated in the tropics and subtropical areas as a staple food crop for more than 700 million people around the world. The starchy storage roots of cassava are rich in calories and deficient in all other nutrients, cassava meals has the lowest of all sources of dietary protein. Severe protein deficiencies and malnutrition problems are common among those who rely on cassava as their daily meal. Although cassava is ranked the fifth most important crop in the world, the research on this crop is very limited. Among the limited …

Avian Developmental Endocrinology: The Effects And Role Of Yolk Hormones, Sibling Dynamics, And Life-History, Corinne Patricia Kozlowski

Dissertations

Inter-specific variation of the endocrine system is an underlying component for variation in avian life-history. Females deposit hormones into the yolks of their eggs, and embryonic exposure affects nestling phenotype. Hormones are also produced endogenously by developing nestlings, further influencing their behavior and physiology. This dissertation examines the role of the endocrine system in development by focusing on several different avian taxa. Yolk hormone concentrations often vary across the laying order and may mediate hatching asynchrony. These patterns were characterized in two species that lay asynchronously hatching clutches: Eastern screech owls (Megascops asio) and cockatiels (Nymphicus hollandicus). The patterns described …

The Spatial Ecology Of Galapagos Tortoises And New Mexico's Reptiles, Jacek Tomasz Giermakowski

Biology ETDs

The analysis of spatial processes and spatial heterogeneity is an important part of ecology because distribution of organisms in space partly defines ecology as a discipline. In addition, advances in analysis of DNA, geographical computing and the availability of vast amounts of environmental data obtained by satellites provide new opportunities for studying ecology at different spatial and phylogenetic scales. My research takes advantage of information gathered by satellites and adds modeling and data collected on the distribution of different reptiles to examine processes at various spatial and temporal scales. In Chapter 1 I describe how juvenile Galapagos tortoises change their …

Labile Soil Carbon Inputs Mediate The Soil Microbial Community Composition And Plant Residue Decomposition Rates, Marie-Anne De Graaff, Aimee T. Classen, Hector F. Castro, Christopher W. Schadt

Biology Faculty Publications and Presentations

• Root carbon (C) inputs may regulate decomposition rates in soil, and in this study we ask: how do labile C inputs regulate decomposition of plant residues, and soil microbial communities?

• In a 14 d laboratory incubation, we added C compounds often found in root exudates in seven different concentrations (0, 0.7, 1.4, 3.6, 7.2, 14.4 and 21.7 mg C g soil) to soils amended with and without ¹³C-labeled plant residue. We measured CO₂ respiration and shifts in relative fungal and bacterial rRNA gene copy numbers using quantitative polymerase chain reaction (qPCR).

• Increased labile C input …

Environmental Influence On Brain, Behavior, And Gene Expression In Drosophila, Xia Wang

UNLV Theses, Dissertations, Professional Papers, and Capstones

Brain development and behavior are sensitive to environmental stimuli. To gain an understanding of how and to what extent environmental variations, particularly with regard to thermal stress and sensory input, affect brain development, function, and genomic activity, in this dissertation, three interrelated studies were conducted in Drosophila melanogaster.

The first study examined the effects of ecologically-relevant hyperthermia stress on development of the Drosophila mushroom body (MB), a conserved sensory integration and associative center in the insect brain. A daily hyperthermic episode throughout larval and pupal development was shown to severely disrupt MB anatomy by reducing intrinsic Kenyon cell neuron …

Characterization Of Transgenic Plum Lines Expressing Gastrodia Antifungal Protein (Gafp)-1, Hetalben Kalariya

All Theses

The Gastrodia antifungal protein (GAFP-1) is a mannose-binding lectin originating from the Asiatic orchid Gastrodia elata. It has potential for conferring resistance to fungal and non-fungal pathogens in other plants which is currently being investigated. The goals of this research project were to determine (i) the potential movement of GAFP-1 protein from transgenic rootstocks into the non-transgenic scion of chimeric-grafted trees (ii) the levels of GAFP-1 protein in lines of the cultivar Bluebyrd expressing the gene gafp-1 under the control of the polyubiquitin promoter bul409, and (iii) the susceptibility of selected lines to the root pathogens Phytophthora cinnamomi Rands and …

Development Of A Carbohydrate Microarray System And A Microcantilever-Based Biosensor For Detection Of Target Bacteria, Yunyan Cheng

All Theses

The increasing number of disease outbreaks results in a demand for novel pathogen detectors. Carbohydrates serving as receptors for pathogen lectins have become the focus of such research. Two primary sugars, ‡-D-mannose and ‡-L-fucose, as receptors for Escherichia coli and Pseudomonas aeruginosa, respectively, are of great interest to researchers due to their high affinity. These interactions can be studied using carbohydrate microarrays, which are also suitable platforms for detecting bacterial pathogens. In addition, carbohydrates have the potential to act as sensing molecules in microcantilever-based biosensors. The goal of this research was to design a carbohydrate microarray system to study the …

Antimicrobial And Anticancer Activity Of Essential Oils From Guatemalan Medicinal Plants, Andrew B. Miller

Theses and Dissertations

Guatemalan medicinal plants were collected and screened for the presence of essential oils using steam distillation. Oil was found in 63 species from 24 families and was tested in tube dilution assays for activity against Escherichia coli, Staphylococcus aureus, Streptococcus mutans, Lactobacillus acidophilus and Candida albicans. Several essential oils were highly active with 20 instances of oils inhibiting the microbes at an MIC of 0.31 µl/ml. Oils were also tested against cancerous and established cell lines using a 15% (v/v) agar-media which was developed to improve essential oil solubility. Assays were performed against three cancer lines: …

Using Critical-Thinking Skills To Substantiate Or Challenge Controversial Claims Endorsing A Myriad Of Weight-Loss Products, Teresa F. Degolier

Biological Sciences Faculty Publications

This exercise engages students in critically evaluating weight-loss products and programs. Specific objectives are to investigate, analyze, and substantiate claims made by the weight-loss industry and interpret how these claims may be fraudulent, misleading, or perhaps even truthful.

The Genesis Of Pathogenic E. Coli, Alan L. Gillen, Douglas Oliver

Faculty Publications and Presentations

Even though some strains are pathogenic, most E. coli strains still show evidence of being one of God’s “very good” creations.

Fig. 1. E. coli Gram stain (Wiki commons image). E. coli are Gram-negative bacteria, thus red or pink colored. The red color is due to a counterstain, called safranin.

Escherichia coli is frequently in the news (Fig. 1). E. coli often gets “bad press” for contaminating drinking water or causing a food-borne infection (via hamburgers, apple juice, spinach, or other foods). Recently a new strain (E. coli O145) has been implicated in contaminating lettuce in the U.S., while …

Lifelines Fall 2010, Southern Adventist University

Lifelines - Biology Department Newsletter

The Fall 2010 issue of Lifelines contains articles on the Biology Department's display at the General Conference, the addition of Randy Bishop and Dr. Benjamin Thornton to the faculty, and news from the Biology Club.

Fall 2010, Biology @ Su, Syracuse University Biology Department

Biology @ SU

No abstract provided.