Digital Commons Network^™

Novel Functions Of Cardiolipin Remodeling In Saccharomyces Cerevisiae And Mammalian Cells: Implications For Barth Syndrome, Wenjia Lou

Wayne State University Dissertations

Cardiolipin (CL) is a unique phospholipid that is primarily localized within the inner mitochondrial membrane. Newly synthesized CL undergoes acyl remodeling to produce CL species enriched with unsaturated acyl groups. The tafazzin gene (TAZ) encodes a transacylase that remodels CL. Deficiencies in CL remodeling cause Barth syndrome (BTHS), an X-linked genetic disorder resulting from TAZ mutations that lead to reduced total CL content and an accumulation of monolysocardiolipin (MLCL), an intermediate of the CL remodeling pathway. However, which of these biochemical outcomes contributes to the physiological defects is not fully understood.

Deletion of yeast CL phospholipase rescues the taz1growth phenotype. …

The Biological Flora Of Coastal Dunes And Wetlands: Avicennia Germinans (L.) L., Robert I. Lonard, Frank W. Judd, Kenneth R. Summy, Hudson R. Deyoe, Richard Stalter

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Avicennia germinans (L.) L. is a pantropical, subtropical, and occasionally warm-temperate mangrove species that occurs on shorelines that have a broad horizontal tidal range. Also known as black mangrove, stands typically develop under anoxic, water-logged conditions in substrates of silt or clay. Black mangrove can tolerate salinity values ranging from 0 to 90 parts per thousand. Salt is excreted from salt glands on both leaf epidermal surfaces, and aerosol salt spray and salt crystals are frequently observed on the upper leaf epidermis. Avicennia germinans is viviparous. The embryos have no dormancy requirements, and there is no seed bank. This mangrove …

Responding To Soil Fungal Communities: A Look At Interactions Between Arbuscular Mycorrhizal Fungi And The Common Yellow Monkeyflower, Mariah Mcintosh

Undergraduate Theses, Professional Papers, and Capstone Artifacts

The obligate fungal mutualists arbuscular mycorrhizal fungi (AMF) colonize the roots approximately 80% of vascular plants, generally thought to provide mineral nutrition, pathogen protection, or drought resistance to plants in exchange for photosynthetic carbon. Because of the ecological and evolutionary significance of these interactions, much work has been done to understand this symbiosis at the community level. However, much remains to be understood about how AMF affect plant fitness on an individual level. In this study, we took advantage of the tractability of the emerging model species Mimulus guttatus, the common yellow monkeyflower, to identify genetic differences in how …

Osm1 Facilitates The Transfer Of Electrons From Erv1 To Fumarate In The Redox-Regulated Import Pathway In The Mitochondrial Intermembrane Space, Deepa V. Dabir

Biology Faculty Works

Prokaryotes have aerobic and anaerobic electron acceptors for oxidative folding of periplasmic proteins. The mitochondrial intermembrane space has an analogous pathway with the oxidoreductase Mia40 and sulfhydryl oxidase Erv1, termed the mitochondrial intermembrane space assembly (MIA) pathway. The aerobic electron acceptors include oxygen and cytochrome c, but an acceptor that can function under anaerobic conditions has not been identified. Here we show that the fumarate reductase Osm1, which facilitates electron transfer from fumarate to succinate, fills this gap as a new electron acceptor. In addition to microsomes, Osm1 localizes to the mitochondrial intermembrane space and assembles with Erv1 in a …

Simultaneous Synergist, Antagonistic, And Additive Interactions Between Multiple Local Stressors All Degrade Algal Turf Communities On Coral Reefs, Sarah Joy Bittick

Biology Faculty Works

1. Ecological communities are subjected to multiple anthropogenic stressors at both global and local scales that are increasing in number and magnitude. Stressors can interact in complex ways and are classified as additive, synergistic or antagonistic; the nature of the interaction is key to predicting changes and understanding community resilience. Coral reefs are among the most impacted communities and have shifted from coral to algal-dominated states, and overfishing, nutrient enrichment and sedimentation are local stressors that often cooccur and may support degraded algal states. Short algal turfs are abundant benthic space holders on healthy reefs that may be pushed by …

Sigma Virus (Dmelsv) Incidence In Lines Of Drosophila Melanogaster Selected For Survival Following Infection With Bacillus Cereus, Meghan L. Bentz, Eve A. Humphrey, Lawrence G. Harshman

School of Biological Sciences: Faculty Publications

The immune response of Drosophila melanogaster is complex and involves both specific and general responses to parasites. In this study we tested for cross-immunity for bacteria and viruses by scoring the incidence of infection with the vertically transmitted Sigma virus (DMelSV) in the progeny of a cross between females transmitting DMelSV at high frequencies and males from lines subjected to three selection regimes related to resistance to Bacillus cereus. There was no significant difference in transmission of DMelSV among selection regimes, though results suggest that the B. cereus selected lines had lower rates of infection by DMelSV. We found …

An Assessment Of How Plant And Mycorrhizal Communities Have Been Affected Along A Mine-Impacted Watershed In The Northwest Territories, Kevin Maccoll

Theses and Dissertations (Comprehensive)

Giant Mine is an inactive gold mine located nine kilometers north of Yellowknife, Northwest Territories. Giant Mine has been the source of arsenic trioxide for the Baker Creek watershed since it opened over 60 years ago. Although arsenic levels in the creek are above the limits considered to be biologically relevant, there is no concrete evidence that plants and mycorrhizae have actually been affected. This study provides an initial assessment of the impacts mining activity at Giant Mine has had on plants and mycorrhizae in the Baker Creek watershed. Nine sites were sampled around Giant Mine: five sites downstream from …

Defining The Relationship Between Maternal Care Behavior And Hearing Development In Wistar Rats, Jingyun Qiu

Dissertations and Theses

Previous studies in rodents have demonstrated the profound effects that variations in maternal care play during the postnatal development of the brain. However, much less is known about how maternal care affects hearing development. Recently, manipulations of maternal care have been investigated to accelerate hearing onset. We hypothesized that accelerated hearing development results from changes in maternal care behavior. To test this hypothesis, we used a selection model in which natural variations in maternal care were identified in a large cohort of dams by measuring the frequency of different behaviors including LG followed by selection of dams with LG scores …

Energy Budget For The African Cichlid, Tropheus Duboisi, Cortney Kay Morris

Browse all Theses and Dissertations

Herbivorous fish living in Lake Tanganyika rely on algae as their main source of food and are constantly feeding on low quality (low energy) food. The lake is warming leading to fewer nutrient upwelling’s that are likely limiting the amount of energy available to fish. I calculated an energy budget to compare energy intake against energy expenditure of the African cichlid, Tropheus duboisi, by measuring metabolic rates at rest, while feeding, digesting and being aggressive as well as the caloric content of food, feces, and urine. Fish fed a low quality diet of algae contaminated with sediments had lower growth …

Biological Individuality: A Relational Reading, Scott F. Gilbert

Biology Faculty Works

No abstract provided.

Identification Of Oxygen Optima For Mouse Trophoblast Stem Cells And Human Embryos And The Stress Responses Upon Departing Optima, Yu Yang

Wayne State University Dissertations

Low level of oxygen (O2) occurs physiologically during in vivo embryo development. As developing embryos moving from fallopian tube to uterus, oxygen level gradually decreases to ≤ 5% at the time of blastocyst implantation. Blastocysts are made of two major cell populations, trophoblast cells and inner cell mass, from which trophoblast stem cells (TSCs) and embryonic stem cells (ESCs) are derived respectively. TSCs serve as placental stem cells that later on proliferate and differentiate into placenta. Previous study has shown that 2% O2 is the optimal O2 level for mTSC in vitro growth and potency maintenance, which agrees with their …

The Spatial Ecology Of The Southern Copperhead In A Fragmented And Non-Fragmented Habitat, Megan Veronica Novak

Electronic Theses and Dissertations

Habitat fragmentation may alter the spatial ecology of organisms inhabiting the fragmented landscape by limiting the area of habitat available and altering microhabitat features. I quantified and compared movement of southern copperheads (Agkistrodon contortrix contortrix) in a fragmented and non-fragmented habitat to determine the effects of habitat fragmentation on the spatial ecology of the southern copperhead. Effective distance moved by each individual was measured by the use of thread bobbins attached via medical tape to the posterior quarter of the snake. Straight-line distance moved and occupied area were calculated with the GPS coordinates recorded at each snake sighting. Straight-line distance …

A 2-Part Study Examining; Hepatitis B Vaccination Rates Among High-Risk Adults And The Influence Of Education On Knowledge And Awareness Of Hepatitis B And The Use Of Vaccines As A Safe, Preventative Measure Among University Of Ms Students, Ariel Wilson

Honors Theses

Background: Hepatitis B virus (HBV) can be prevented and controlled through vaccination. However, vaccination among high-risks adults in the U.S. is still low (50%). This poses serious threats for HBV transmission between infected individuals and high-risk individuals. Objective: The specific aims of this research were to (a) explore the prevalence of hepatitis B vaccination uptake from 2011-2014 (b) to examine intrapersonal, interpersonal, and organizational level factors associated with receiving hepatitis B vaccination among high-risk adults. Methods: Data were analyzed from the National Health and Nutrition Examination Survey (NHANES) from 2011-2014 to (1) assess the prevalence of hepatitis B vaccination and …

Grasshopper (Orthoptera: Caelifera) And Plant Community Relationships On Indio Mountains Research Station, Hudspeth County, Texas, Sara Ebrahim Baqla

Open Access Theses & Dissertations

An ecogeographic analysis of a grasshopper survey was conducted at eight sites on Indio Mountains Research Station (IMRS) in the Chihuahuan Desert during September 2014 through December 2015. Five sites contained ephemeral water sources (earthen tanks), one had perennial water (spring system), and two were open desert. A total of 23 grasshopper species were identified, and six of those were new records for the property. The most species rich site was Echo Tank, with 14 grasshopper species. A UPGMA dendrogram showed Red Tank and Rattlesnake Tank, both wetland sites, to be the most similar (CBR = .84). A poisson model …

Dynamic Acquisition And Loss Of Dual-Obligate Symbionts In The Plant-Sap-Feeding Adelgidae (Hemiptera: Sternorrhyncha: Aphidoidea), Carol D. Von Dohlen, Usha Spaulding, Kistie B. Patch, Ethan P. White, Robert G. Foottit, Nathan P. Havill, Gaelen R. Burke

Biology Faculty Publications

Sap-sucking insects typically engage in obligate relationships with symbiotic bacteria that play nutritional roles in synthesizing nutrients unavailable or in scarce supply from the plant-sap diets of their hosts. Adelgids are sap-sucking insects with complex life cycles that involve alternation between conifer tree species. While all adelgid species feed on spruce during the sexual phase of their life cycle, each adelgid species belongs to a major lineage that feeds on a distinct genus of conifers as their alternate host. Previous work on adelgid symbionts had discovered pairs of symbionts within each host species, and unusual diversity across the insect family, …

Isolation And Characterization Of Triclocarban Degrading Bacteria As Plant Growth Promoter, Merry Krisdawati Sipahutar

Chulalongkorn University Theses and Dissertations (Chula ETD)

Triclocarban (TCC) is a widely used as antimicrobial agent in household products. High usage volume of TCC results in its accumulation in sludge and lead to contamination in environments. Application of biosolid in agricultural activities leads to contamination of TCC in agricultural areas. So. development of bioremediation technique for TCC is necessary to maintain quality of agricultural ecosystem. For that purpose, this research isolated 5 soil bacteria capable of TCC degradation and with plant-growth promoting (PGP) activities including Ochrobactrum sp. MC22, Ochrobactrum sp. MC35, Sphingobacterium sp. MC43, Pseudomonas sp. MS45, and Pseudomonas fluorescens MC46. Among them, Ochrobactrum sp. MC22 and …

Duration Of Periconceptual Folic Acid Supplementation In Women Booking For Antenatal Care, Shona Cawley, Laura Mullaney, Rachel Kennedy, Maria Farren, Daniel Mccartney, Michael J. Turner

Articles

Objective: To provide accurate estimates of the commencement time, duration and dosage of folic acid (FA) supplementation taken by Irish women in the periconceptional period. The study also aimed to establish the factors associated with optimal FA supplementation practices. Design: Cross-sectional observational study. Women’s clinical and sociodemographic details were computerised. Maternal weight and height were measured before calculating BMI. Detailed FA supplementation questionnaires were completed under the supervision of a trained researcher. Setting: A large university maternity hospital, Republic of Ireland, January 2014–April 2016. Subjects: Women (n 856) recruited at their convenience in the first trimester. Results: While almost all …

1,10-Phenanthroline-5,6-Dione-Based Compounds Are Effective In Disturbing Crucial Physiological Events Of Phialophora Verrucosa, Marcela Queiroz Granato, Diego De Souza Goncalves, Sergio Henrique Seabra, Malachy Mccann, Michael Devereux, Andre Luis De Souza Dos Santos, Lucimar Ferreira Kneipp

Articles

Phialophora verrucosa is a dematiaceous fungus able to cause chromoblastomycosis, phaeohyphomycosis and mycetoma. All these fungal diseases are extremely difficult to treat and often refractory to the current therapeutic approaches. Therefore, there is an urgent necessity to develop new antifungal agents to combat these mycoses. In this context, the aim of the present work was to investigate the effect of 1,10-phenanthroline-5,6-dione (phendione) and its metal-based derivatives [Ag(phendione)2]ClO4 = ([Ag(phendione)2]+) and [Cu(phendione)3](ClO4)2.4H2O = ([Cu(phendione)3]2+) on crucial physiological events of P. verrucosa conidial cells. Using the CLSI protocol, we have shown that phendione, [Ag(phendione)2]+ and [Cu(phendione)3]2+ were able to inhibit fungal proliferation, …

Exploring Smoking, Mental Health And Smoking-Related Disease In A Nationally Representative Sample Of Older Adults In Ireland: A Retrospective Secondary Analysis, Annette Burns, Judith Strawbridge, Luke Clancy, Frank Doyle

Articles

Objective

Smoking is the leading preventable cause of death among individuals with mental health difficulties (MHD). The aim of the current study was to determine the impact of smoking on the physical health of older adults with MHD in Ireland and to explore the extent to which smoking mediated or moderated associations between MHD and smoking-related diseases.

Methods

Cross-sectional analysis of a nationally representative sample of 8175 community-dwelling adults aged 50 and over from The Irish Longitudinal Study on Ageing (TILDA) was undertaken. Multivariate adjusted logistic regression models were used to assess the association between MHD, smoking (current/past/never) and smoking-related …

Passive Warming Reduces Stress And Shifts Reproductive Effort In The Antarctic Moss, Polytrichastrum Alpinum, Erin E. Shortlidge, Sarah M. Eppley, Hans Kohler, Todd N. Rosenstiel, Gustavo E. Zúñiga, Angélica Casanova-Katny

Biology Faculty Publications and Presentations

Background and Aims: The Western Antarctic Peninsula is one of the most rapidly warming regions on Earth, and many biotic communities inhabiting this dynamic region are responding to these well-documented climatic shifts. Yet some of the most prevalent organisms of terrestrial Antarctica, the mosses, and their responses to warming have been relatively overlooked and understudied. In this research, the impacts of 6 years of passive warming were investigated using open top chambers (OTCs), on moss communities of Fildes Peninsula, King George Island, Antarctica.

Methods: The effects of experimental passive warming on the morphology, sexual reproductive effort and stress physiology of …

A Comparison Of Benthic Macroinvertebrate Assemblages Between Perennial And Intermittent Headwater Streams Of The Mattole River In Northern California, Usa, Mason S. London

Cal Poly Humboldt theses and projects

Intermittent streams are common throughout the world and comprise 60% or more of total river lengths in the conterminous United States. Despite their prevalence, intermittent streams are understudied, particularly first-order headwater streams, which are vital for maintaining the function, health and biotic diversity of river networks. In June 2016, I sampled five intermittent and five perennial headwater streams in the Mattole River watershed in northwestern coastal California, USA, to compare benthic macroinvertebrate (BMI) assemblages between intermittent and perennial streams. BMI samples were collected using a 500µm mesh D-net at eight randomly located riffles along a 150-m reach, and then composited, …

Minibrain And Wings Apart Control Organ Growth And Tissue Patterning Through Downregulation Of Capicua, Liu Yang

Graduate Doctoral Dissertations

The regulation of organ growth is a fundamental aspect of developmental biology. My work uses Drosophila as a model system to understand how the various growth regulators are coordinated. The transcriptional repressor Capicua (Cic) controls tissue patterning and restricts organ growth, and has been recently implicated in several cancers and neurodegenerative diseases. Cic has emerged as a primary sensor of signaling downstream of the receptor tyrosine kinase (RTK)/extracellular signal-regulated kinase (ERK) pathway, but how Cic activity is regulated in different cellular contexts remains poorly understood. In order to identify Cic regulators, I have used affinity purification/mass spectrometry (AP-MS) to study …

Microbial Phytases And Phytate: Exploring Opportunities For Sustainable Phosphorus Management In Agriculture, Nelly P. Balaban, Aliya D. Suleimanova, Lia R. Valeeva, Inna B. Chastukhina, Natalia L. Rudakova, Margarita R. Sharipova, Eugene V. Shakirov

Biological Sciences Faculty Research

Myo-inositol phosphates (phytates) are important biological molecules produced largely by plants to store phosphorus. Phytate is very abundant in many different soils making up a large portion of all soil phosphorus. This review assesses current phytase science from the perspective of its substrate, phytate, by examining the intricate relationship between the phytate-hydrolyzing enzymes and phytate as their substrate. Specifically, we examine available data on phytate’s structural features, distribution in nature and functional roles. The role of phytases and their localization in soil and plant tissues are evaluated. We provide a summary of the current biotechnological advances in using industrial …

Can Functional Traits Predict Plant Community Response To Global Change?, Sarah Kimball, Jennifer L. Funk, Marko J. Spasojevic, Katharine N. Suding, Scot Parker, Michael K. Goulden

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

One primary goal at the intersection of community ecology and global change biology is to identify functional traits that are useful for predicting plant community response to global change. We used observations of community composition from a long-term field experiment in two adjacent plant communities (grassland and coastal sage shrub) to investigate how nine key plant functional traits were related to altered water and nitrogen availability following fire. We asked whether the functional responses of species found in more than one community type were context dependent and whether community-weighted mean and functional diversity were significantly altered by water and nitrogen …

Comparative Genomic Analysis Of Two Serotype 1/2b Listeria Monocytogenes Isolates From Analogous Environmental Niches Demonstrates The Influence Of Hypervariable Hotspots In Defining Pathogenesis, Aidan Casey, Kieran Jordan, Aidan Coffey, Edward M. Fox, Olivia Mcauliffe

Department of Biological Sciences Publications

The vast majority of clinical human listeriosis cases are caused by serotype 1/2a, 1/2b, 1/2c, and 4b isolates of Listeria monocytogenes. The ability of L. monocytogenes to establish a systemic listeriosis infection within a host organism relies on a combination of genes that are involved in cell recognition, internalization, evasion of host defenses, and in vitro survival and growth. Recently, whole genome sequencing and comparative genomic analysis have proven to be powerful tools for the identification of these virulence-associated genes in L. monocytogenes. In this study, two serotype 1/2b strains of L. monocytogenes with analogous isolation sources, but …

The Vibrio Cholerae Minor Pilin Tcpb Initiates Assembly And Retraction Of The Toxin- Coregulated Pilus, Dixon Ng, Tony Harn, Tuba Altindal, Subramania Kolappan, Jarrad M. Marles, Rajan Lala, Ingrid Spielman, Yang Gao, Caitlyn A. Hauke, Gabriela Kovacikova, Zia Verjee, Ronald K. Taylor, Nicolas Biais, Lisa Craig

Publications and Research

Type IV pilus (T4P) systems are complex molecular machines that polymerize major pilin proteins into thin filaments displayed on bacterial surfaces. Pilus functions require rapid extension and depolymerization of the pilus, powered by the assembly and retraction ATPases, respectively. A set of low abundance minor pilins influences pilus dynamics by unknown mechanisms. The Vibrio cholerae toxin-coregulated pilus (TCP) is among the simplest of the T4P systems, having a single minor pilin TcpB and lacking a retraction ATPase. Here we show that TcpB, like its homolog CofB, initiates pilus assembly. TcpB co-localizes with the pili but at extremely low levels, equivalent …

Color-Mediated Foraging By Pollinators: A Comparative Study Of Two Passionflower Butterflies At Lantana Camara, Gyanpriya Maharaj

Dissertations

Colorful floral signaling and resulting insect foraging behaviors have only been extensively examined in hymenopteran pollinators, especially bees, in comparison to flies, beetles, and butterflies regardless of their ecological importance. Therefore, my study provides novel information by focusing on foraging behaviors of adult passionflower butterflies, Heliconius melpomene and Dryas iulia, to the color changing flowers of Lantana camara. My dissertation which is divided into four chapters, aims to explore various aspects of color mediate foraging in passionflower butterflies by combining observations in the wild with controlled field and laboratory experiments. In the first chapter I reviewed flower color development and …

Efficient Method For Transfer Of Microinjected Eggs To Mouse Ampulla For Generating Transgenic Mice, Guang Wen, Jin Di, Qian Li, Jianling Chen, Ling Jin, Cheng Wang, Sanqing Xu

Publications and Research

Background: The new method described here is highly efficient in transferring microinjected mouse eggs (MEs) through the bursa membrane of a surrogate mother mouse to the ampulla of the oviduct without damaging the blood vessels on the bursa membrane.

Results: This method causes no loss of blood, and it produces newborn pups/founders from approximately 70% of the transferred MEs, because only a small hole is made on the blood vessel–free area of the bursa membrane and ampulla of the surrogate mother mouse. The infundibulum remains intact. The small hole on the bursa membrane/ ampulla may already heal up before the …

Weight Management Delivered Through An App, May Help Resolve Body Image Dissatisfaction In Women Enrolled In Wic, Alexis Ariel O’Connell

Honors Capstones

No abstract provided.

Preliminary Examination Of The Bacterial Diversity Harbored By The Pill Bug (Armadillidium Vulgare), Sondos Alhajouj

Theses & Dissertations

Pill bugs (Armadillidium vulgare) were examined at 4 time points during 2015- 2016. The time points corresponded to summer, fall, winter, and spring. At each time point, 2 to 10 pill bugs were collected from each of three sites. All sites were located in San Antonio, Texas. The first site was in central San Antonio, but due to difficulties in collecting specimens the first site was only utilized at the first time point. The remaining localities, Bonilla Science Hall on the campus of the University of the Incarnate Word and a private residence in northwest San Antonio, were …