Digital Commons Network^™

Developing And Testing A Cognitive Field Test For Lead-Exposed Wild Songbirds, Samantha Glowacki

Senior Honors Theses and Projects

Anthropogenic impacts drive global changes that can negatively impact wildlife. For example, using lead pipes in Flint, MI has resulted in contaminated drinking water that is likely to have moved into the environment through irrigation. Juvenile American robins (Turdus migratorius) captured in watered parks of Flint have blood-lead levels considered dangerous to brain functioning. The purpose of this study was to develop and test a feeder puzzle for assessing the cognitive effects of lead in wild urban songbirds. We predicted that songbirds could learn how to feed from a feeder puzzle, and if they visited the feeder in groups, then …

Aquatic Plants And Their Application To Successful Floating Treatment Wetlands, Katherine May Mazanec

Masters Theses

“This research aims to mitigate eutrophication of freshwater habitats affected by urban stormwater runoff. Two highly impacted urban ponds near the Missouri S&T campus in Rolla were the focus of this research on the application of floating treatment wetlands (FTWs). An FTW consists of a man-made floating mat that is planted with emergent or floating macrophytes. The plants grow on the mat and their roots extend into the water column below the mat. Plant tissues, especially roots in direct contact with the water, take up nutrients, act as biofilm growth sites, and may facilitate precipitation of nutrients. With urbanization, ponds …

Evaluation Of The Symbiotic Relation Between Endophyte And Poplar Trees Exposed To Landfill Leachate, Catalina Vega Hurtado

Masters Theses

“The contamination of soil and groundwater from leachate leakage from landfill has turned, nowadays, into a global public issue. One of the main concerns about this pollutant is the potential threat to human and ecosystem health. The current research studied endophyte bacteria in association with poplar trees (Populus sp.), as a method of bioremediation of landfill leachates. The objective of the project was to identify treatment strategies that may improve plant performance (survival rates, plant fitness, and degradation efficacy) with the purpose of being implemented in phytoremediation plots, aimed to intercept and treat landfill leachate, before the contamination of watershed. …

Using Phytoglycogen-Based Nanoparticles To Enhance Inosine Monophsophate Delivery Using Rainbow Trout And Bovine Models, Kristof Jenik

Theses and Dissertations (Comprehensive)

Recently, there has been interest in the use of nucleotides in industrials feeds, with inosine monophosphate showing the most promising effects on growth and immunity. Rainbow trout and Alberta cattle are two of Canadas most profitable farmed animals, if their growth rates and immunity could be enhanced this would further improve their value. The impacts of IMP, a phytoglycogen-based nanoparticle (NP) and inosine monophosphate cationically bound to the phytoglycogen-based nanoparticle (IMP-NP) were characterized in rainbow trout in vivo and in vitro and in vitro in bovine cells. Rainbow trout that were fed an IMP-NP containing feed on average had higher …

Abiotic Conditions, Algal Biomass & Fish Growth Rates Affect Fish Mercury Concentrations In Two Subarctic Lakes, Ari Yamaguchi

Theses and Dissertations (Comprehensive)

Kakisa Lake and Tathlina Lake, located in the Dehcho Region of the Northwest Territories, support important fisheries for the local Ka’a’gee Tu First Nation (KTFN). Recently, Walleye (Sander vitreus) of typical catch size in Tathlina Lake were found to have mercury concentrations above Health Canada’s commercial sale guideline of 0.5 ppm. Wild foods with elevated mercury concentrations can pose health risks to the humans who consume them, depending on consumption amounts and vulnerability factors such as age and pregnancy. Because wild fish can accumulate relatively high mercury levels and subsistence fishing contributes greatly to food security in northern …

Effects And Modes Of Action Of Exogenous Androgens On Gonadal Steroidogenesis In Male Mummichog (Fundulus Heteroclitus), Robert Rutherford

Theses and Dissertations (Comprehensive)

Androgens are a recognized class of endocrine disrupting compounds that are introduced into the aquatic environment through a variety of anthropogenic sources. Exogenous androgens can interact with the hypothalamus-pituitary-gonadal (HPG) axis in fish and alter its normal function, resulting in effects such as skewed sex ratios, intersex individuals, reduced fecundity, or altered mating behaviours. In fish, these apical effects are commonly correlated to depression of the terminal sex hormones testosterone, 17β-estradiol and 11-ketotestosterone (11KT). It is currently thought that the reduction in plasma sex hormones is an effect of negative feedback inhibition of steroid synthesis within the HPG axis after …

Boreal Subarctic Lake Water Quality, Zooplankton Communities, And Benthic Macroinvertebrate Communities In Areas Impacted By Wildfire, Thomas J. Pretty

Theses and Dissertations (Comprehensive)

Wildfires are a natural phenomenon in the boreal forest, but recent studies suggest that there will be increases in the frequency and severity of fires in this region over the next century. When wildfires occur in lake catchments, they may affect water quality and invertebrate communities living in associated lakes. Invertebrates, including zooplankton and benthic invertebrates, play important roles in aquatic food webs, acting as conduits of energy from primary producers to larger organisms such as fish and water birds. Therefore, it is important to understand how these groups will respond to changes caused by fires. Unfortunately, few studies have …

Investigation Of Rna Interference (Rnai)-Mediated Gene Silencing In Rainbow Trout, Sarah Au

Theses and Dissertations (Comprehensive)

RNA interference (RNAi) was first characterized in plants and invertebrates as an antiviral innate immune response. It is a natural antiviral defence mechanism to degrade viral RNA by virus-induced gene silencing. Studies showed synthetic long double-stranded RNA (dsRNA; >30bp) degraded Caenorhabditis elegans messenger RNA (mRNA) transcripts, resulting in sequence-dependent gene silencing. Currently, there is only limited research on RNAi in fish, particularly the use of long dsRNA to trigger sequence-specific gene silencing. This is because studies have shown long dsRNAs trigger interferon response that could mask gene-specific RNAi effects. This thesis explored long dsRNA-mediated RNAi pathways in rainbow trout cells …

Bromocriptine Improves Glucose Tolerance Independent Of Circadian Timing, Prolactin, Or The Melanocortin-4 Receptor, Sarah N. Framnes-Deboer, Ellen Bakke, Suma Yalamanchili, Hannah Peterson, Darleen A. Sandoval, Randy J. Seeley, Deanna M. Arble

Biological Sciences Faculty Research and Publications

Bromocriptine, a dopamine D2 receptor agonist originally used for the treatment of hyperprolactinemia, is largely successful in reducing hyperglycemia and improving glucose tolerance in type 2 diabetics. However, the mechanism behind bromocriptine’s effect on glucose intolerance is unclear. Here, we tested three hypotheses, that bromocriptine may exert its effects on glucose metabolism by 1) decreasing prolactin secretion, 2) indirectly increasing activity of key melanocortin receptors in the central nervous system, or 3) improving/restoring circadian rhythms. Using a diet-induced obese (DIO) mouse model, we established that a 2-wk treatment of bromocriptine is robustly effective at improving glucose tolerance. …

Link Between Energy Investment In Biosynthesis And Cellular Resistance To Oxidative Insult: Test The Cost-Quality Hypothesis In Insects, Taiwo Bolanle Iromini

Masters Theses

“The metabolic cost of growth is the amount of energy invested to fuel the anabolic biochemical reactions of biosynthesis. It has been implicated in the efficiency of farm animals and fishes, thus, increased economic profit. The metabolic cost of growth in the cockroach nymph was reported to be 20-fold higher than that of the painted lady butterfly caterpillar. The cost-quality hypothesis was proposed to explain the extremely low biosynthesis energy cost in painted lady caterpillar when physiological and ecological processes the metabolic growth cost was attributed to could not. In this study, the cost-quality hypothesis was tested.

Midgut cells were …

Investigating Dispersal Ability To Infer Diversification In The Birds Of Madagascar, Robert D. Lauer

Master's Theses

The objective of this study was to investigate whether dispersal ability, as measured by a proxy of hand-wing index 2, influenced diversification of the birds of Madagascar at two scales. Madagascar is home to several avian lineages that have diversified greatly while other lineages are only represented by a single species. a key question in evolutionary biology is why some of these lineages diversified while others did not. One way to address this is to examine what features of these lineages promotes their diversification. Recent studies have focused on the relative importance of dispersal ability to diversification at the continental …

The Influence Of Landscape Factors On Black-Tailed Prairie Dog (Cynomys Ludovicianus) Colony Persistence In Northwest Kansas, Jamie Oriez

Master's Theses or Doctor of Nursing Practice

The black-tailed prairie dog (Cynomys ludovicianus) is a colonial and fossorial rodent species that serves as an ecosystem engineer and keystone species in North America’s grasslands. Black-tailed prairie dogs historically ranged from northern Mexico to southern Canada, and from eastern Nebraska to the foothills of the Rocky Mountains. However, with the loss and fragmentation of grasslands, introduction of Sylvatic plague (Yersinia pestis), and control measures such as poisoning and shooting, black-tailed prairie dogs are limited to less than 5 percent of their historical range.

In this study, I examined how colony area, location, isolation, and surrounding …

The Effects Of Prescribed Burning And Microhabitat Type On Ant (Formicidae) Functional Groups And A Survey Of Ants In The Dr. Howard Reynolds Nature Area (A Mixed Grass Prairie), Ashley N. Durr

Master's Theses or Doctor of Nursing Practice

This project sought to understand how prescribed burning and microhabitat type impacts Kansas ant functional groups and also whether prescribed burning in different microhabitat types altered the burn’s impact on those functional groups. The Dr. Howard Reynolds Nature Trail, located in Hays, Kansas, was burned in the spring of 2019. The area consists of 2 distinct habitat types: a dry, mixed-grass dominated uphill area and a moist, densely vegetated downhill area. Pitfall trapping was conducted during the summers of the year prior to the burn (2018) and the year following the burn (2019). 15 pitfall traps were spread across each …

Prenatal Aromatase Inhibition Alters Postnatal Immunity In Domestic Chickens (Gallus Gallus), Jeff W. Simkins, Abby E. Joseph, Frances Bonier, Z. Morgan Benowitz-Fredericks

Faculty Journal Articles

In birds, exposure to exogenous testosterone during embryonic development can suppress measures of immune function; however, it is unclear whether these effects are due to direct or indirect action via aromatization. Estradiol (E2) is synthesized from testosterone by the enzyme aromatase, and this conversion is a necessary step in many signaling pathways that are ostensibly testosterone-dependent. Many lines of evidence in mammals indicate that E2 can affect immune function. We tested the hypothesis that some of the immunomodulatory effects observed in response to in ovo testosterone exposure in birds are mediated by conversion to E2 by aromatase, by using fadrozole …

Development, Characterization, And Cross-Amplification Of Polymorphic Microsatellite Markers For North American Trachymyrmex And Mycetomoellerius Ants, Alix E. Matthews, Chase Rowan, Colby Stone, Katrin Kellner, Jon Seal

Biology Faculty Publications and Presentations

Objective: The objective of this study is to develop and identify polymorphic microsatellite markers for fungus-gardening (attine) ants in the genus Trachymyrmex sensu lato. These ants are important ecosystem engineers and have been a model group for understanding complex symbiotic systems, but very little is understood about the intraspecific genetic patterns across most North American attine species. These microsatellite markers will help to better study intraspecific population genetic structure, gene flow, mating habits, and phylogeographic patterns in these species and potentially other congeners. Results: Using next-generation sequencing techniques, we identified 17 and 12 polymorphic microsatellite markers from T. septentrionalis and …

Fatty Acid Composition Analyses Of Commercially Important Fish Species From The Pearl River Estuary, China, Xiyang Zhang, Xi Ning, Xiaoxiao He, Xian Sun, Xinjian Yu, Yuanxiong Cheng, Riqing Yu, Yuping Wu

Biology Faculty Publications and Presentations

Evaluation of fish nutritional content information could provide essential guidance for seafood consumption and human health protection. This study investigated the lipid contents, fatty acid compositions, and nutritional qualities of 22 commercially important marine fish species from the Pearl River Estuary (PRE), South China Sea. All the analyzed species had a low to moderate lipid content (0.51–7.35% fat), with no significant differences in fatty acid profiles among fishes from different lipid categories (p > 0.05). Compared with previous studies from other regions, the examined fish species exhibited higher proportions of saturated fatty acids (SFAs, 39.1 ± 4.00%) and lower contents of …

Genetic Control Of Arbuscular Mycorrhizal Colonization In Helianthus Annuus, Katherine Stahlhut

Honors Undergraduate Theses

Plant symbiosis with arbuscular mycorrhizal (AM) fungi provides many benefits for plants, including increased nutrient uptake, drought tolerance, and belowground pathogen resistance. In order to have a better understanding of the genetic architecture of mycorrhizal symbiosis, we conducted a genome-wide association study (GWAS) by phenotyping a diversity panel of cultivated sunflower (Helianthus annuus) for root colonization under inoculation with the AM fungus Rhizophagus intraradices. This mapping panel consists of 261 inbred lines that capture approximately 90% of the genetic diversity present in the cultivated sunflower germplasm. Using a mixed linear model approach with a high-density genetic map, we …

Getting Lost: The Fungal Hijacking Of Ant Foraging Behavior In Space And Time, Thienthanh Trinh

Electronic Theses and Dissertations, 2020-2023

Many parasites have evolved strategies to exploit host behavior such that it benefits parasite transmission. Ophiocordyceps manipulations of carpenter ant behavior represent an evident example. Manipulated ants are coerced to ascend vegetation and clamp down their mandibles in a stereotypical "death-grip" bite. The fungus then kills the ant, sprouts a stalk and releases infective spores. Research has focused on this ultimate manipulation, leaving the subtler behavioral changes pre-biting largely unexplored. Field and transcriptome data found that the host circadian clocks, olfaction, and communication may be disrupted, suggesting that the fungus is affecting ant foraging activity and effectivity. To test these …

Molecular Detection Of Intestinal Helminths And Protozoa Among Young Children In Dosso Region, Niger, Kristen Aiemjoy, Ahmed M. Arzika, Catherine Cook, Elodie Lebas, Nils Pilotte, Jessica R. Grant, Steven A. Williams, Thomas M. Lietman, Jeremy D. Keenan

Biological Sciences: Faculty Publications

Eukaryotic parasites are significant contributors to childhood illness in Niger. While helminthiases have received national attention through mass deworming efforts, the epidemiology of intestinal protozoa in Niger remains underexamined. This study employed real-time PCR diagnostics to describe the prevalence of two schistosomes, four soil-transmitted helminths, and one protozoan parasite in Boboye Department, Dosso Region. Prevalence was assessed using bulk stool specimens collected from a population-based sample of 86 children residing in 9 communities. Anthropometric measurements were used to calculate child growth z-scores and stool consistency was graded. Helminths were absent from the study population, with the exception of a single …

Misconceptions About Conception And Other Fallacies: Historical Bias In Reproductive Biology, Virginia Hayssen

Biological Sciences: Faculty Publications

Natural selection (differential reproduction) is a major tenet of evolutionary theory. In mammals the success of reproduction is primarily controlled by females who provide the majority of offspring care via gestation and lactation. In some species, maternal care also extends post-weaning. This primacy of female reproduction in evolution has not quite crept into our understanding of organismal adaptations in anatomy, physiology, and behavior. This cultural legacy has left its mark and led to misconceptions in our understanding of reproductive biology that are especially prominent in the understanding of reproduction in the general public. Here, I give examples of such misconceptions. …

Trypanosomatids Detected In The Invasive Avian Parasite Philornis Downsi (Diptera: Muscidae) In The Galapagos Islands, Patricia Parker, Courtney Pike, María Piedad Lincango, Charlotte Causton

Biology Department Faculty Works

Alien insect species may present a multifaceted threat to ecosystems into which they are introduced. In addition to the direct damage they may cause, they may also bring novel diseases and parasites and/or have the capacity to vector microorganisms that are already established in the ecosystem and are causing harm. Damage caused by ectoparasitic larvae of the invasive fly, Philornis downsi (Dodge and Aitken) to nestlings of endemic birds in the Galapagos Islands is well documented, but nothing is known about whether this fly is itself associated with parasites or pathogens. In this study, diagnostic molecular methods indicated the presence …

The Role Of Melatonin In Biological Rhythms Of Songbirds, Clifford E. Harpole

Theses and Dissertations--Biology

In vertebrates, melatonin is a hormone that is produced and secreted at night and inhibited by light. This unique “darkness-only” expression profile makes it an intellectually appealing candidate for a means of transmitting temporal information to an individual, both time of day and time of year.

In passerine birds, “time of day” information is certainly transmitted via melatonin secretion. The primary producer of systemic melatonin in this family of birds is the pineal gland, and surgical removal of it causes a bird to become arrhythmic in constant conditions. I find that as pinealectomized house sparrows (Passer domesticus) become …

Investigation Into The Roles Of Her9 And Capn5 During Retinal Development And Regeneration, Cagney Coomer

Theses and Dissertations--Biology

The formation of a healthy and functioning eye requires coordinated interactions between numerous signaling pathways and gene regulatory networks within the developing neural retina. Tight regulation of gene expression is required for cell specification and differentiation in this multilayered, light sensitive tissue. The photoreceptors are the light detecting cells of the retina, capable of functioning in both intense sunlight and dim light at night. When pigment cells of the photoreceptor outer segment are activated by light, a complex chain of events called phototransduction leads to the electrical signal cascade that is transmitted through the retina and ultimately to the brain …

Combination Of Investigational Cell-Based Therapy And Deep Brain Stimulation To Alter The Progression Of Parkinson’S Disease, Nader El Seblani

Theses and Dissertations--Pharmacy

Parkinson’s disease (PD) is the second most common neurodegenerative disorder and the motor symptoms are caused by progressive loss of midbrain dopamine neurons. There is no current treatment that can slow or reverse PD. Our current “DBS-Plus” clinical trial (NCT02369003) features the implantation in vivo of autologous Schwann cells (SCs) derived from a patient’s sural nerve into the substantia nigra pars compacta (SNpc) in combination with Deep Brain Stimulation (DBS) therapy for treating patients with advanced PD.

The central hypothesis of our research is that transdifferentiated SCs within conditioned nerve tissue will deliver pro-regenerative factors to enhance the survival of …

Diet Of A Recently Reintroduced River Otter (Lontra Canadensis) Population In Taos County, New Mexico, Gabriela Alexandra Wolf-Gonzalez

Theses and Dissertations--Forestry and Natural Resources

North American river otters (Lontra canadensis), native to every U.S. state and Canada, experienced extensive population decreases and range reduction until the mid-20th century as a result of overexploitation and habitat loss during European colonization. The last known river otter in New Mexico was killed on the Gila River in 1953, although unverified reports continued thru 2008. After a nearly 60-year absence from New Mexico, 33 adult river otters were reintroduced to the Rio Pueblo de Taos in the northern part of the state between 2008-2010; however, they were not subsequently monitored or studied. I characterized diet of …

Effects Of Shelterwood And Patch Cut Harvests On A Post White-Nose Syndrome Bat Community In The Cumberland Plateau In Eastern Kentucky, Phillip Lee Arant

Theses and Dissertations--Forestry and Natural Resources

The impact of shelterwood and patch cuts harvests on bat communities was tested at three sites in Eastern Kentucky. Shelterwood harvests had 50% of the basal area and understory removed to create a uniform spacing of residual trees. Patch cuts had 1-hectare circular openings created to remove 50% of the basal area creating an aggregated spacing of residual trees. Acoustic detectors were deployed to assess activity levels pre-harvest. Sites were then sampled from 1 – 2 years post-harvest to determine differences. Pre-harvest data revealed little acoustic activity for the Myotis spp. at two sites. The remaining site had high activity …

Analysis Of Adult Neural Retina Extracellular Vesicle Release, Rna Transport And Proteomic Cargo, Jason Mighty, Jing Zhou, Alberto Benito-Martin, Sami Sauma, Samer Hanna, Onyekwere Onwumere, Cui Shi, Martin Muntzel, Moira Sauane, Michael Young, Henrik Molina, Dianne Cox, Stephen Redenti

Publications and Research

PURPOSE. Extracellular vesicles (EVs) contain RNA and protein cargo reflective of the genotype and phenotype of the releasing cell of origin. Adult neural retina EV release, RNA transfer, and proteomic cargo are the focus of this study.

METHODS. Adult wild-type mouse retinae were cultured and released EV diameters and concentrations quantified using Nanosight. Immunogold transmission electron microscopy (TEM) was used to image EV ultrastructure and marker protein localization. Quantitative real-time polymerase chain reaction (qRT-PCR) was used to analyze retinal cell transcripts present in EVs. Super-resolution microscopy was used to image fluorescent (green) RNA and (red) lipid membrane labeled EVs, released …

Sinorhizobium Meliloti Changes Motility Phenotypes In The Presence Of Serum, Eris K. Bisal

Theses and Dissertations

Sinorhizobium meliloti is a nitrogen-fixing flagellated soil bacterium that engages in a mutual symbiotic relationship with the legume Medicago sativa. Using its flagella, S. meliloti is chemotactic in response to varying environmental cues thereby directed to a target, which is typically the root hairs of M. sativa. Lu et al, 2012 suggested that a signal from the plant can switch S. meliloti from a free-living flagellated microbe to a host-invading non-flagellated microbe, although this signal has not been identified. This switch is thought to occur inside curled root hairs of the plant, and after becoming non-flagellated, S. …

The Development Of Complex Abdominal Spot Patterns In Three Drosophila Species, William A. Dion

Dissertations, Master's Theses and Master's Reports

Complex color patterns like the spots on leopards and butterfly wings beg the question – how did these traits evolve? To understand the evolution of novel morphologies, we need to study the differences in morphogenesis between closely related species. Here, I examine and compare the development of complex abdominal spot patterns among three species of Drosophila closely related in evolutionary time. Through in situ hybridization, I have characterized the expression patterns of three pigmentation genes among the fruit fly species. Additionally, I have built upon previous work in our lab regarding the regulation of pigmentation by beginning to develop an …

Using Unmanned Aircraft Systems To Identify Invasive Species, Tithe Ahmed

Mahurin Honors College Capstone Experience/Thesis Projects

Invasive species serve as a threat to native biodiversity and ecosystem sustainability. Combatting the spread of invasive species requires long-term physical and monetary commitments. In Balule Nature Reserve of Greater Kruger National Park, South Africa, Opuntia ficus-inidica (the common prickly pear) has been a relentless invader, displacing the local flora and fauna. The goal of this project is to battle invasive species such as prickly pear using efficient and inexpensive technology: unmanned aerial vehicles (UAVs or drones) and multispectral sensors.

Using a 4-bandwidth Parrot Sequoia multispectral sensor in tandem with the DJI Phantom Pro 3^TM UAV, images of land …