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Commentary: Selecting Synaptic Partners: Grasping The Role Of Unc- 6/Netrin, Q L. Ch'ng

Faculty Publications, Biological Sciences

Forming synaptic connections of the appropriate strength between specific neurons is crucial for constructing neural circuits to control behavior. A recent paper in Neural Development describes the use of a synapse-specific label in Caenorhabditis elegans to implicate local UNC-6/netrin signaling in this developmental process. Thus, as well as their well known roles in cell migration and axon guidance, UNC-6/netrin signals distinguish an appropriate synaptic partner from other potential targets.

The Evolution Of Multi-Component Visual Signals In Darters (Genus Etheostoma), Jennifer M. Gumm, Tamra C. Mendelson

Faculty Publications

As complex traits evolve, each component of the trait may be under different selection pressures and could respond independently to distinct evolutionary forces. We used comparative methods to examine patterns of evolution in multiple components of a complex courtship signal in darters, specifically addressing the question of how nuptial coloration evolves across different areas of the body. Using spectral reflectance, we defined 4 broad color classes present on the body and fins of 17 species of freshwater fishes (genus Etheostoma) and quantified differences in hue within each color class. Ancestral state reconstruction suggests that most color traits were expressed in …

Behavior And Development Of Red-Eyed Treefrogs During Metamorphosis [Poster], Robin Greene, Clay Noss, Tobias Lanberg, James R. Vonesh, Karen Warkentin

Biology Presentations

Anuran metamorphosis is an extreme transformation from tadpole to frog that involves tremendous morphological and behavioral change. During this transition (Gosner stages 42-46), metamorphs are exposed to both aquatic and terrestrial selective pressures (e.g., predators, desiccation). Their behavior may be crucial for survival, but it is not well studied. Our goal was to describe morphological and behavioral patterns during metamorphosis in red-eyed treefrogs, Agalychnis callidryas. We first quantified development through metamorphosis by measuring and staging 25 wild-caught individuals every 8 h. We then conducted field behavioral observations of 37 metamorphs, at various developmental stages, that had emerged from a …

Habitat Use And Population Densities Of Rain Forest Chameleons In The East Usambara Mountains Of Tanzania [Poster], Philip Shirk, David A. Patrick, James R. Vonesh, Kim Howell

Biology Presentations

Conclusions:

• Chamaeleo dilepis and Ri. brevicaudatus are absent from forest at this elevation (852-1103m), while K. matschiei, K. vosseleri, K. tenuis, and R. spinosus are relatively scarce in the forest. Trioceros deremensis and R. temporalis are common, but density varies greatly.
• The endemic and scarce K. matschiei and K. vosseleri may be of concern given their scarcity in forest habitat. Density estimates in other habitat types are needed to determine status.
• For accurate density estimates, it is important to consider seasonal variation in density and animals too high to be observed in surveys.

Tadpole Density Changes The Relationship Of Red-Eyed Treefrog Morphology And Jumping Performance [Poster], Julie Charbonnier, T. Landberg

Biology Presentations

As organisms develop, increased body size is often accompanied by shape changes that alter the morphology–performance relationship. Animals with different growth histories may also have different shapes at similar body sizes. To investigate how larval growth history affects the morphology–performance relationship, we raised red-eyed treefrog tadpoles (Agalychnis callidryas) at three densities (5, 25 and 50 tadpoles per 400 L tank) and measured jump distance during metamorphosis. We predicted that tadpoles grown at low density would metamorphose into larger frogs with relatively longer legs than those grown at higher densities. We also expected low density frogs to jump further …

An Intermediate In The Evolution Of Superfast Sonic Muscles., Hin-Kiu Mok, Eric Parmentier, Kuo-Hsun Chiu, Michael L. Fine

Biology Publications

Background

Intermediate forms in the evolution of new adaptations such as transitions from water to land and the evolution of flight are often poorly understood. Similarly, the evolution of superfast sonic muscles in fishes, often considered the fastest muscles in vertebrates, has been a mystery because slow bladder movement does not generate sound. Slow muscles that stretch the swimbladder and then produce sound during recoil have recently been discovered in ophidiiform fishes. Here we describe the disturbance call (produced when fish are held) and sonic mechanism in an unrelated perciform pearl perch (Glaucosomatidae) that represents an intermediate condition in the …

Metabolic Restructuring During Energy-Limited States: Insights From Artemia Franciscana Embryos And Other Animals, Steven C. Hand, Michael A. Menze, Apu Borcar, Yuvraj Patil, Joseph A. Covi, Julie A. Reynolds, Mehmet Toner

Faculty Research & Creative Activity

Many life history stages of animals that experience environmental insults enter developmental arrested states that are characterized by reduced cellular proliferation, with or without a concurrent reduction in overall metabolism. In the case of the most profound metabolic arrest reported in invertebrates, i.e., anaerobic quiescence in Artemia franciscana embryos, acidification of the intracellular milieu is a major factor governing catabolic and anabolic downregulation. Release of ion gradients from intracellular compartments is the source for approximately 50% of the proton equivalents needed for the 1.5 unit acidification that is observed. Recovery from the metabolic arrest requires re-sequestration of the protons with …

Terrestrial Macrofungi Of Illinois Old-Growth Prairie Groves, Scott J. Meiners, Andrew Methven, Vincent P. Hustad

Faculty Research & Creative Activity

ABSTRACT.—Macrofungi from two old-growth prairie grove remnants in the Midwestern United States (Brownfield and Trelease Woods. Champaign Co., IL ) were surveyed over two summer and fall fruiting periods. Communities of Ascomycetes, Basidiomycetes and Myxomycètes were sampled and compared using multivariate statistical analyses. Standard estimations of species richness were calculated for comparison with other studies of fungal diversity. Environmental factors (rainfall, humidity, air temperature and soil temperature at 10 cm depth) as well as leaf litter composition, and woody plant communities were surveyed to assess their impact on fungal communities. Fungal community structure was found to differ significandy both between …

Is The Lcp Superfund Site An Ecological Trap For Clapper Rails?, Karen F. Gaines, Jay W. Summers, James C. Cumbee Jr., Warren L. Stephens Jr., Gary L. Mills

Faculty Research & Creative Activity

Rallus longirostris (Clapper Rail) is considered a good indicator species for toxicants because of its strong site fidelity and predictable diet of benthic organisms. High levels of the rare PCB Aroclor 1268 have been found in Clapper Rail adults, chicks, and eggs from the marshes associated with the Linden Chemical Plant (LCP) in Brunswick, GA. Recently, sampling and testing feathers has successfully been used as a non-lethal tool to trace exposure and assimilation of Aroclor 1268 in rails from the LCP site. This approach allows us to infer how and when these birds are exposed to contaminants in the marsh …

Trace Metals (Cu, Zn, Cd And Pb) In Juvenile Fish From Estuarine Nurseries Along The Portuguese Coast, Rita P. Vasconcelos, Patrick Reis-Santos, Anabela Maia, Miguel Ruano, Maria J. Costa, Henrique N. Cabral

Faculty Research & Creative Activity

Organic and inorganic pollution can impact organisms directly and affect condition, growth and survival of juvenile fish which use estuaries as nurseries, and thereby affect marine adult populations quantitatively and qualitatively. Trace element contamination (Cu, Zn, Cd, Pb) in juveniles of commercial fish Solea solea, Solea senegalensis, Platichthys flesus, Diplodus vulgaris and Dicentrarchus labrax collected in putative nurseries of the main Portuguese estuaries (with diverse intensities and sources of anthropogenic pressures) was determined via atomic absorption spectrometry. Contamination was significantly different among species. Similar levels of contamination were found among estuaries, except for D. vulgaris. Cu and Zn concentrations ranged …

Snp-Based Mapping Of Crossover Recombination In Caenorhabditis Elegans, Grace C. Bazan, Kenneth J. Hillers

Biological Sciences

Caenorhabditis elegans is an important experimental organism for the study of recombination during meiosis. Here, we provide methods for the use of single-nucleotide polymorph isms (SNPs) for the study of crossing over in C. elegans.

Physical Habitat And Social Conditions Across A Coral Reef Shape Spatial Patterns Of Intraspecific Behavioral Variation In A Demersal Fish, Meagan N. Schrandt, Kristin M. Hardy, Kaitlin M. Johnson, Sean C. Lema

Biological Sciences

As coral reef ecosystems decline in health worldwide, reef-associated fishes are being impacted by changes to their coral reef habitats. While previous studies have shown coral reef structure to affect the demography of reef fishes, changes in reef conditions may also impact the behavior of reef fishes as they cope with altered habitats. In this study, we examined spatial patterns of intraspecific behavioral variation in the bicolor damselfish (Stegastes partitus) across the fringing reefs of Curaçao (Caribbean Sea), and explored how this behavioral variation associated with physical and social conditions on the reef. Principal components analysis (PCA) condensed …

The Deadly Effects Of ‘‘Nonlethal’’ Predators, Shannon J. Mccauley, Locke Rowe, Marie-Josee Fortin

Biological Sciences

Nonconsumptive predator effects are widespread and include plasticity as well as general stress responses. Caged predators are often used to estimate nonconsumptive effects, and numerous studies have focused on the larval stages of animals with complex life cycles. However, few of these studies test whether nonconsumptive predator effects, including stress responses, are exclusively sublethal. Nor have they assessed whether these effects extend beyond the larval stage, affecting success during stressful life-history transitions such as metamorphosis. We conducted experiments with larvae of a dragonfly (Leucorrhinia intacta) that exhibits predator-induced plasticity to assess whether the mere presence of predators affects …

Lichens Of The Callahan Mine, A Copper- And Zinc-Enriched Superfund Site In Brooksville, Maine, U.S.A., Nishanta Rajakaruna, Tanner B. Harris, Stephen R. Clayden, Alison C. Dibble, Fred C. Olday

Biological Sciences

Metal-enriched habitats often harbor physiologically distinct biotas able to tolerate and accumulate toxic metals. Plants and lichens that accumulate metals have served as effective indicators of ecosystem pollution. Whereas the diversity of metal-tolerant lichens has been well documented globally, the literature of metal-tolerant lichen communities for eastern North America is limited. We examined the lichen flora of the Callahan Mine, a Cu-, Pb-, and Zn-enriched superfund site in Brooksville, Hancock County, Maine, U.S.A. Through collections along transects across metal-contaminated areas of the mine, we documented 76 species of lichens and related fungi. Fifty species were saxicolous, 26 were terricolous. Forty-three …

Environmental Proteomics: Changes In The Proteome Of Marine Organisms In Response To Environmental Stress, Pollutants, Infection, Symbiosis, And Development, Lars Tomanek

Biological Sciences

Environmental proteomics, the study of changes in the abundance of proteins and their post-translational modifications, has become a powerful tool for generating hypotheses regarding how the environment affects the biology of marine organisms. Proteomics discovers hitherto unknown cellulareffects of environmental stressors such as changes in thermal, osmotic, and anaerobic conditions. Proteomic analyses have advanced the characterization of the biological effects of pollutants and identified comprehensive and pollutant-specific sets of biomarkers, especially those highlighting post-translational modifications. Proteomic analyses of infected organisms have highlighted the broader changes occurring during immune responses and how the same pathways are attenuated during the maintenance of …

Advertisement Call And Distribution Of The Treefrogs Hyla Chrysoscelis And Hyla Versicolor In Virginia, Joseph C. Mitchell, Christopher A. Pague

Virginia Journal of Science

The gray treefrog complex consists of two sibling species that are indistinguishable morphologically, the diploid Hyla chrysoscelis and the tetraploid Hyla versicolor. Identification is possible in the field only by audio recognition of male advertisement call trill rates (pulses/second). During 1979-1983 we evaluated taped calls of these two species taken from 89 populations from throughout Virginia to map their respective ranges and to evaluate differences in call parameters. Hyla chrysoscelis occurs in the Coastal Plain, eastern and southern Piedmont, and in southwestern Virginia. Hyla versicoloroccurs in the Piedmont, Blue Ridge, and Ridge and Valley regions south to Wythe …

Changes In Habitat Heterogeneity Alter Marine Sessile Benthic Communities, Pablo Munguia, Richard W. Osman, John Hamilton, Robert B. Whitlatch, Roman Zajac

Biology and Environmental Science Faculty Publications

Habitat heterogeneity is considered an important mechanism influencing diversity patterns in spatially structured habitats. However, spatial heterogeneity is not static and it can change along temporal scales. These changes, whether gradual or rapid, have the potential of forcing species extinctions or facilitating the introduction of nonnative species. Here, we present modeling results that show how changes in spatial heterogeneity over several generations can produce strong changes in benthic species composition residing in eastern Long Island Sound, USA. For many benthic species, hard substrate is a limiting resource which can vary in availability among different coastal areas. We modeled gradual changes …

An Exotic Species Is The Favorite Prey Of A Native Enemy, Yiming Li, Zunwei Ke, Supen Wang, Geoffrey R. Smith, Xuan Liu

Faculty Publications

No abstract provided.

"The Status And Distribution Of Freshwater Crabs [Indo-Burma Region Of Asia]" , Neil Cumberlidge, Peter Kl Ng, Darren Cj Yeo

Book Sections/Chapters

No abstract provided.

Dynamics Of Gene Duplication In The Genomes Of Chlorophyll D-Producing Cyanobacteria: Implications For The Ecological Niche, Scott R. Miller, A. Michelle Wood, Robert E. Blankenship, Maria Kim, Steven Ferriera

Biological Sciences Faculty Publications

Gene duplication may be an important mechanism for the evolution of new functions and for the adaptive modulation of gene expression via dosage effects. Here, we analyzed the fate of gene duplicates for two strains of a novel group of cyanobacteria (genus Acaryochloris) that produces the far-red light absorbing chlorophyll d as its main photosynthetic pigment. The genomes of both strains contain an unusually high number of gene duplicates for bacteria. As has been observed for eukaryotic genomes, we find that the demography of gene duplicates can be well modeled by a birth-death process. Most duplicated Acaryochloris genes are of …

Faking Giants: The Evolution Of High Prey Clearance Rates In Jellyfishes, José Luis Acuña, Ángel López-Urrutia, Sean Colin

Arts & Sciences Faculty Publications

Jellyfishes have functionally replaced several overexploited commercial stocks of planktivorous fishes. This is paradoxical, because they use a primitive prey capture mechanism requiring direct contact with the prey, whereas fishes use more efficient visual detection. We have compiled published data to show that, in spite of their primitive life-style, jellyfishes exhibit similar instantaneous prey clearance and respiration rates as their fish competitors and similar potential for growth and reproduction. To achieve this production, they have evolved large, water-laden bodies that increase prey contact rates. Although larger bodies are less efficient for swimming, optimization analysis reveals that large collectors are advantageous …

Quantitatively Measuring In Situ Flows Using A Self-Contained Underwater Velocimetry Apparatus (Scuva), Kakani Katija, Sean Colin, John H. Costello, John O. Dabiri

Arts & Sciences Faculty Publications

The ability to directly measure velocity fields in a fluid environment is necessary to provide empirical data for studies in fields as diverse as oceanography, ecology, biology, and fluid mechanics. Field measurements introduce practical challenges such as environmental conditions, animal availability, and the need for field-compatible measurement techniques. To avoid these challenges, scientists typically use controlled laboratory environments to study animal-fluid interactions. However, it is reasonable to question whether one can extrapolate natural behavior (i.e., that which occurs in the field) from laboratory measurements. Therefore, in situ quantitative flow measurements are needed to accurately describe animal swimming in their natural …

New England Faculty And College Students Differ In Their Views About Evolution, Creationism, Intelligent Design, And Religiosity, Guillermo Paz-Y-Miño C, Avelina Espinosa

Arts & Sciences Faculty Publications

Public acceptance of evolution in Northeastern U.S. is the highest nationwide, only 59%. Here, we compare perspectives about evolution, creationism, intelligent design (ID), and religiosity between highly educated New England faculty (n = 244; 90% Ph.D. holders in 40 disciplines at 35 colleges/universities) and college students from public secular (n = 161), private secular (n = 298), and religious (n = 185) institutions: 94/3% of the faculty vs. 64/14% of the students admitted to accepting evolution openly and/or privately, and 82/18% of the faculty vs. 58/42% of the students thought that evolution is definitely true or probably true, respectively. Only …

Adaptive Responses Of Branchial Morphology To Hypoxia In The Neotropical Electric Fish Genus Brachyhypopomus, Leilani B. Pathak

Electronic Theses and Dissertations

Many tropical aquatic environments worldwide are characterized by intermittent or prolonged hypoxia (low dissolved oxygen). Nevertheless, many tropical freshwater fishes are able to inhabit these challenging environments via a range of morphological, physiological and behavioral adaptations. Brachyhypopomus is a diverse genus of weakly electric fishes represented by 28 known species distributed from Panama to Argentina. 17 species are restricted to permanently normoxic habitats (blackwater rivers and terra firme streams), eight species are restricted to seasonally or perennially hypoxic habitats (whitewater floodplains of large tropical rivers or permanent swampy habitats), and three species are eurytopic (occur in both seasonally hypoxic and …

Molecular Identification Of Novel Genes Associated With Atherosclerosis, Stephen R. Archacki

ETD Archive

No abstract provided.

Role Of The Thrombospondin - Cd36 - Histidine Rich Glycoprotein Pathway In Tumor Growth And Angiogenesis, James Scott Hale

ETD Archive

Cancer is typically thought of as an uncommon disease, in which solid tumors require a blood supply in order to grow and metastasize. Interestingly, upon autopsy a large portion of elderly individuals display numerous non-vascularized lesions throughout their bodies. Thus, the angiogenic switch in the development of cancer presents an important therapeutic target. Previous work by our laboratory has established an interaction between CD36, Histidine Rich Glycoprotein (HRGP) and Thrombospondin 1 (TSP-1) in the modulation of angiogenesis. Briefly, endothelial cell receptor CD36 interaction with soluble or cell bound TSP-1 leads to the induction of an apoptotic signaling cascade in vascular …

Intricate Rna : Rna Interactions In U12-Dependent Nuclear Pre-Mrna Splicing, Tupa Basu Roy

ETD Archive

Coding regions or exons of most human genes are interrupted by noncoding intervening regions or introns. Removal of nuclear precursor messenger RNA (pre-mRNA) introns by RNA splicing is an essential step in eukaryotic gene expression. Two types of nuclear pre-mRNA introns are known as U2-dependent or major type and U12-dependent or minor type. Nuclear pre-mRNA introns are removed by two distinct sets of ribonucleoprotein complexes or spliceosomes, which are formed by five small nuclear RNAs (snRNAs) for each spliceosome. U6atac and U12 snRNAs are central to U12-dependent spliceosome and play essential roles in the removal of U12-dependent introns. U6atac and …

Bats Of Kansas, Dale W. Sparks, Curtis J. Schmidt, Jerry R. Choate

Sternberg Museum of Natural History Faculty Publications

In memory of Curtis J. Schmidt (1977-2022)

Invariably, our most feared neighbors on planet earth are the animals that we know the least about. Almost as frequently, when people are exposed to these animals, the fear turns quickly to fascination. Unfortunately, many of these animals are accessible only to the professional scientist. Though science has made great strides in understanding the basic biology and behaviors of many of our least-known animals, this information is generally kept locked away from the general public by the dry, technical language of science. In this publication, it is our hope to open your eyes …

Evidence For Olfactory Learning In Procellariiform Seabird Chicks, Gregory B. Cunningham, Gabrielle A. Nevitt

Biology Faculty/Staff Publications

Burrow nesting procellariiform seabirds use olfactory cues for both foraging and nest recognition. As chicks, burrow nesters develop in the dark, but are exposed to both prey-related and individual-specific scents through contact with their parents. This exposure suggests that chicks may have the opportunity to learn odors while still in the nest. In this study, we examined whether exposure to odorants during development might influence olfactory search behavior expressed later in life. To test this idea, we exposed eggs of thin-billed prions Pachyptila belcheri to a rosy-scented novel odor (phenyl ethyl alcohol, PEA) or a control (water) just before hatching; …

Generating Interest In Plant Biology Among Predominantly Pre-Med Undergraduates Using A Popular Science Novel, Maryann Herman

Biology Faculty/Staff Publications

Many undergraduate pre-med students see little relevance of plant biology to their daily lives or future careers. I have developed assignments for a sophomore-level plant biology course that incorporate readings from from The Botany of Desire by Michael Pollan. After reading a chapter students define botanical terms within the context of the book and write a response to several instructor-provided questions. Each chapter is integrated into a larger topic in class and students discussed relationships between topics on the novel and course content. For example. the fourth chapter discusses domestication and genetic manipulation of the potato. Students are asked to …