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Behavioral And Physiological Female Responses To Male Sex Ratio Bias In A Pond-Breeding Amphibian, Kristine L. Grayson, Stephen P. De Lisle, Jerrah E. Jackson, Samuel J. Black, Erica J. Crespi

Biology Faculty Publications

Introduction: The phenomenon of sexual conflict has been well documented, and in populations with biased operational sex ratios the consequences for the rarer sex can be severe. Females are typically a limited resource and males often evolve aggressive mating behaviors, which can improve individual fitness for the male while negatively impacting female condition and fitness. In response, females can adjust their behavior to minimize exposure to aggressive mating tactics or minimize the costs of mating harassment. While male-male competition is common in amphibian mating systems, little is known about the consequences or responses of females. The red-spotted newt (Notophthalmus …

Serotonin And Synaptic Transmission At Invertebrate Neuromuscular Junctions, Wen-Hui Wu, Robin L. Cooper

Biology Faculty Publications

The serotonergic system in vertebrates and invertebrates has been a focus for over 50 years and will likely continue in the future. Recently, genomic analysis and discovery of alternative splicing and differential expression in tissues have increased the knowledge of serotonin (5-HT) receptor types. Comparative studies can provide useful insights to the wide variety of mechanistic actions of 5-HT responsible for behaviors regulated or modified by 5-HT. To determine cellular responses and influences on neural systems as well as the efferent control of behaviors by the motor units, preparations amenable to detailed studies of synapses are beneficial as working models. …

Phylotranscriptomics To Bring The Understudied Into The Fold: Monophyletic Ostracoda, Fossil Placement, And Pancrustacean Phylogeny, Todd H. Oakley, Joanna M. Wolfe, Annie R. Lindgren, Alexander K. Zaharoff

Biology Faculty Publications and Presentations

An ambitious, yet fundamental goal for comparative biology is to understand the evolutionary relationships for all of life. However, many important taxonomic groups have remained recalcitrant to inclusion into broader scale studies. Here, we focus on collection of 9 new 454 transcriptome data sets from Ostracoda, an ancient and diverse group with a dense fossil record, which is often undersampled in broader studies. We combine the new transcriptomes with a new morphological matrix (including fossils) and existing expressed sequence tag, mitochondrial genome, nuclear genome, and ribosomal DNA data. Our analyses lead to new insights into ostracod and pancrustacean phylogeny. We …

Heavy Metal Chemistry Of Sediments In Caves Of The Springfield Plateau, Missouri-Arkansas-Oklahoma: A Link To Subterranean Biodiversity, Travis M. Doughty, Aaron W. Johnson

The Compass: Earth Science Journal of Sigma Gamma Epsilon

We used X-ray fluorescence (XRF) to compare the heavy metal chemistry of sediments in caves in rural and urban areas to the chemistry of sediments from a control cave in a relatively undisturbed watershed in the Springfield (MO) Plateau. Sediment from Smallin Cave near Ozark, MO, the control cave, has the smallest peak sizes for Zn and Mn and a moderately-sized Pb peak. Sediment from the rural cave exhibited larger peaks of Zn and Mn and a smaller Pb peak. Sediment from the urban cave had the largest Zn, Mn and Pb peaks. Interestingly, smaller peak sizes appear to correlate …

Oncostatin M Promotes Mammary Tumor Metastasis To Bone And Osteolytic Bone Degradation, Celeste Bolin, Ken Tawara, Caleb Sutherland, Jeff Redshaw, Patrick S. Aranda, Jim Moselhy, Robin Anderson, Cheryl Jorcyk

Biology Faculty Publications and Presentations

Oncostatin M (OSM) is an interleukin-6 (IL-6) family cytokine that has been implicated in a number of biological processes including inflammation, hematopoiesis, immune responses, development, and bone homeostasis. Recent evidence suggests that OSM may promote breast tumor invasion and metastasis. We investigated the role of OSM in the formation of bone metastases in vivo using the 4T1.2 mouse mammary tumor model in which OSM expression was knocked down using shRNA (4T1.2-OSM). 4T1.2-OSM cells were injected orthotopically into Balb/c mice, resulting in a greater than 97% decrease in spontaneous metastasis to bone compared to control cells. Intratibial injection of these same …

Indirect Consequences Of Hypolimnetic Hypoxia On Zooplankton Growth In A Large Eutrophic Lake, Daisuke Goto, Kara Lindelof, David L. Fanslow, Stuart A. Ludsin, Steven A. Pothoven, James J. Roberts, Henry A. Vanderploeg, Alan E. Wilson, Tomas O. Höök

School of Biological Sciences: Faculty Publications

Diel vertical migration (DVM) of some zooplankters in eutrophic lakes is often compressed during peak hypoxia. To better understand the indirect consequences of seasonal hypolimnetic hypoxia, we integrated laboratory-based experimental and field-based observational approaches to quantify how compressed DVM can affect growth of a cladoceran, Daphnia mendotae, in central Lake Erie, North America. To evaluate hypoxia tolerance of D. mendotae, we conducted a survivorship experiment with varying dissolved oxygen concentrations, which demonstrated high sensitivity of D. mendotae to hypoxia (≤2 mg O2 l−1), supporting the field observations of their behavioral avoidance of the hypoxic hypolimnion. To investigate the …

Long-Term Effects Of Estradiol Replacement In The Olfactory System, Britto P. Nathan, Michael Tonsor, Robert G. Struble

Faculty Research & Creative Activity

Olfactory dysfunction often precedes other clinical symptoms in chronic neurodegenerative diseases like Alzheimer’s and Parkinson’s disease. Estrogen deficiency and apoE genotype are known risk factors in these diseases and these factors also affect olfaction. Therefore we examined the effects of estradiol replacement following ovariectomy on expression of apoE and markers of cell proliferation, neuronal maturation, synaptogenesis and reactive gliosis in the primary olfactory pathway of wild-type (WT) and apoE knockout (KO) mice. Estradiol replacement increased apoE staining in the olfactory nerve and glomerular layers. Estradiol increased astrocyte density and olfactory epithelium (OE) thickness regardless of the genotype. In addition estradiol …

Reinterpreting Bateman Gradients: Multiple Mating And Selection In Both Sexes Of A Songbird Species, N.M. Gerlach, J.W Mcglothlin, P.G Parker, E.D Ketterson

Biology Department Faculty Works

Bateman’s principle, which states that male reproductive success should increase with multiple mating, whereas female reproductive success should not, has long been used to explain sex differences in behavior. The statistical relationship between mating success and reproductive success, or Bateman gradient, has been proposed as a way to quantify sex differences in sexual selection. We used a long-term data set on the distribution of paternity in the socially monogamous dark-eyed junco to examine the effect of multiple mating on lifetime reproductive success and to determine the relative contributions of within-pair and extra-pair mating. Both sexes exhibited a strong positive Bateman …

High Prevalence Of The Amphibian Chytrid Fungus (Batrachochytrium Dendrobatidis) Across Multiple Taxa And Localities In The Highlands Of Ethiopia, David J. Gower, Thomas M. Doherty-Bone, Roman K. Aberra, Abebe Mengistu, Silvia Schwaller, Michele Menegon, Rafael O. De Sá, Samy A. Saber, Andrew A. Cunningham, Simon P. Loader

Biology Faculty Publications

Surveys of the potentially lethal amphibian chytrid fungus (Batrachochytrium dendrobatidis - Bd) in Africa are patchy, especially in some regions of high species endemicity. We present results of the first Bd surveys of wild amphibians in Ethiopia, for two upland regions on either side of the Rift Valley: the Bale Mountains and the Kaffa region. Surveys were opportunistic so that robust interpretation of the data is limited. Utilizing diagnostic qPCR assays, 51 out of 120 frogs (14 species in 10 genera) tested positive for Bd at altitudes of 1,620–3,225 m, across all genera and species, and all but …

Euscorpius Sicanus (Scorpiones: Euscorpiidae) From Tunisia: Dna Barcoding Confirms Ancient Disjunctions Across The Mediterranean Sea, Matthew R. Graham, Pavel Stoev, Nesrine Akkari, Gergin Blagoev, Victor Fet

Biological Sciences Faculty Research

We used a DNA barcoding marker (mitochondrial cox1) to investigate the controversial natural occurrence of Euscorpius sicanus (C.L. Koch) in North Africa. We tested this hypothesis by comparing a sample collected from a mountain in Tunisia to disjunct populations in Sardinia, Malta, and Greece. Using these samples, and a few additional Euscorpius spp. from southern Europe as outgroups, we reconstructed the maternal phylogeny. We then used a molecular clock to place the phylogeny in a temporal context. The Tunisian sample grouped closest to a specimen from Sardinia, with both being more distantly related to E. sicanus from Malta, which is …

Ectoparasites Of American Kestrels In Northwestern New Jersey And Their Relationship To Nestling Growth And Survival, Mark J. Lesko, John Smallwood

Department of Biology Faculty Scholarship and Creative Works

American Kestrel (Falco sparverius) populations have been declining throughout much of North America during recent decades. To determine if the ectoparasite burdens of nestlings may be a contributing factor, we examined broods of kestrels in nest boxes in northwestern New Jersey. Our objectives were to identify and quantify the arthropod ectoparasites of nestlings, and to determine if removing these parasites from nestlings would increase kestrel nesting success. Of 26 broods we examined, we randomly chose 13 and manually removed from the nestlings all visible arthropods during three visits, when nestlings were age 57, 1012, and 1517 d old; we handled …

Enrichment Of Hp1a On Drosophila Chromosome 4 Genes Creates An Alternate Chromatin Structure Critical For Regulation In This Heterochromatic Domain, Nicole Riddle, Youngsook Jung, Tingting Gu, Artyom Alekseyenko, Dalal Asker, Hongxing Gui, Peter Kharchenko, Aki Minoda, Annette Plachetka, Yuri Schwartz, Michael Tolstorukov, Mitzi Kuroda, Vincenzo Pirrotta, Gary Karpen, Peter Park, Sarah C.R. Elgin

Biology Faculty Research

Chromatin environments differ greatly within a eukaryotic genome, depending on expression state, chromosomal location, and nuclear position. In genomic regions characterized by high repeat content and high gene density, chromatin structure must silence transposable elements but permit expression of embedded genes. We have investigated one such region, chromosome 4 of Drosophila melanogaster. Using chromatin-immunoprecipitation followed by microarray (ChIP-chip) analysis, we examined enrichment patterns of 20 histone modifications and 25 chromosomal proteins in S2 and BG3 cells, as well as the changes in several marks resulting from mutations in key proteins. Active genes on chromosome 4 are distinct from those in …

Non-Photoperiodic Regulation Of Reproductive Physiology In The Flexibly Breeding Pine Siskin (Spinus Pinus), Heather E. Watts, Thomas P. Hahn

Biology Faculty Works

In order to time reproduction to coincide with favorable conditions, animals use environmental cues to up- and down-regulate the reproductive axis appropriately. Although photoperiodic cues are one of the best studied of such environmental cues, animals also attend to others such as temperature, food availability, rainfall and social cues. Such non-photic cues are expected to be particularly important for tropical species and temperate-zone species that exhibit flexible or opportunistic breeding schedules. In this study, we investigate the use of non-photic cues, specifically food availability and social cues, to time the initiation of reproductive development in the pine siskin (Spinus …

The Development Of Dermatonotus Muelleri (Anura: Microhylidae: Gastrophryninae), Marissa Fabrezi, Silvia Quinzio, Javier Goldberg, Rafael O. De Sá

Biology Faculty Publications

The monophyly of Microhylidae is supported by an overwhelming accumulation of synapomorphic larval features. Despite the distinctiveness of the microhylid tadpole, few studies have focused on larval development. Microhylid larval morphology is usually described and based on standard tables that imply that developmental events at equivalent stages of overall tadpole development are independent from species-specific patterns of developmental timing. Herein, we present additional developmental data based on external morphology and field data on larval growth for the gastrophrynine microhylid Dermatonotus muelleri. We describe internal morphological variation (e.g., skeletal and soft systems) during larval development. The results indicate that the onset …

Competitive Abilities In Experimental Microcosms Are Accurately Predicted By A Demographic Index For R*, Ebony G. Murrell, Steven A. Juliano

Faculty Publications – Biological Sciences

Resource competition theory predicts that R*, the equilibrium resource amount yielding zero growth of a consumer population, should predict species' competitive abilities for that resource. This concept has been supported for unicellular organisms, but has not been well-tested for metazoans, probably due to the difficulty of raising experimental populations to equilibrium and measuring population growth rates for species with long or complex life cycles. We developed an index (R-index) of R* based on demography of one insect cohort, growing from egg to adult in a non-equilibrium setting, and tested whether R-index yielded accurate predictions of competitive abilities using mosquitoes as …

Sub-Antarctic And High Antarctic Notothenioid Fishes: Ecology And Adaptational Biology Revealed By The Icefish 2004 Cruise Of Rvib Nathaniel B. Palmer, H. William Detrich Iii, Bradley A. Buckley, Daniel F. Doolittle, Christopher D. Jones, Susanne J. Lockhart

Biology Faculty Publications and Presentations

The goal of the ICEFISH 2004 cruise, which was conducted on board RVIB Nathaniel B. Palmer and traversed the transitional zones linking the South Atlantic to the Southern Ocean, was to compare the evolution, ecology, adaptational biology, community structure, and population dynamics of Antarctic notothenioid fishes relative to the cool/temperate notothenioids of the sub-Antarctic. To place this work in a comprehensive ecological context, cruise participants surveyed the benthos and geology of the biogeographic provinces and island shelves on either side of the Antarctic Polar Front (or Antarctic Convergence). Genome-enabled comparison of the responses of cold-living and temperate notothenioids to heat …

Land Snails In Ephemeral Pools At Ottine Swamp, Gonzales County, Texas, Frank J. Dirrigl, Robert H. Mohlenbrock

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

We found five species of terrestrial land snails in dried ephemeral pools at Ottine Swamp, Palmetto State Park, Gonzales County, Texas. We recorded four species previously known (Anguispira stronglyodes, Mesomphix friabilis, Olygyra orbiculata, and Rabdotus dealbatus) and added a new occurrence (Mesodon thyroidus) to the list of species in the park.

Se encontraron cinco especies de caracoles terrestres en los fondos secos de unos charcos efímeros en Ottine Swamp, Palmetto State Park, en el condado de Gonzales, Texas. Registramos cuatro especies conocidas anteriormente (Anguispira stronglyodes, Mesomphix friabilis, Olygyra orbiculata y …

Expression Of Recombinant Earli1, A Hybrid Proline-Rich Protein Of Arabidopsis, In Escherichia Coli And Its Inhibition Effect To The Growth Of Fungal Pathogens And Saccharomyces Cerevisiae, Lan Li, Chen Zhang, Dan Xu, Michael Schläppi, Zi-Qin Xu

Biological Sciences Faculty Research and Publications

EARLI1 is an Arabidopsis gene with pleiotropic effects previously shown to have auxiliary functions in protecting plants against freezing-induced cellular damage and promoting germinability under low-temperature and salinity stresses. Here we determined whether recombinant EARLI1 protein has anti-fungal activity. Recombinant EARLI1 protein lacking its signal peptide was produced in Escherichia coli BL21(DE3) using isopropyl β-d-1-thiogalactopyranoside (IPTG) induction and the prokaryotic expression vector pET28a. Expression of EARLI1 was analyzed by Western blotting and the protein was purified using affinity chromatography. Recombinant EARLI1 protein was applied to fungal cultures of Saccharomyces cerevisiae, Botrytis cinerea and Fusarium oxysporum, and membrane permeability …

The Ranging Costs Of A Fallback Food: Liana Consumption Supplements Diet But Increases Foraging Effort In Howler Monkeys, Jacob C. Dunn, Norberto Asensio, Victor Arroyo-Rodriguez, Stefan A. Schnitzer, Jurgi Cristóbal‐Azkarate

Biological Sciences Faculty Research and Publications

Lianas are important components in the dynamics of tropical forests and represent fallback foods for some primates, yet little is known about their impact on primate ecology, behavior or fitness. Using 2 yr of field data, we investigated liana consumption and foraging effort in four groups of howler monkeys (two in bigger, more conserved forest fragments and two in smaller, less conserved fragments) to assess whether howler monkeys use lianas when and where food availability is scarce, and how liana consumption is related to foraging effort. Howler monkeys in smaller fragments spent more time consuming lianas and liana consumption was …

Preserved Self-Awareness Following Extensive Bilateral Brain Damage To The Insula, Anterior Cingulate, And Medial Prefrontal Cortices, Carissa Philippi, Justin Feinstein, Sahib Khalsa, Antonio Damasio, Daniel Tranel, Gregory Landini, Kenneth Williford, David Rudrauf

Psychology Faculty Works

No abstract provided.

Plant Calcium Content: Ready To Remodel, Jian Yang, Tracy Punshon, Mary Lou Guerinot, Kendal D. Hirschi

Dartmouth Scholarship

By identifying the relationship between calcium location in the plant cell and nutrient bioavailability, the plant characteristics leading to maximal calcium absorption by humans can be identified. Knowledge of plant cellular and molecular targets controlling calcium location in plants is emerging. These insights should allow for better strategies for increasing the nutritional content of foods. In particular, the use of preparation-free elemental imaging technologies such as synchrotron X-ray fluorescence (SXRF) microscopy in plant biology may allow researchers to understand the relationship between subcellular location and nutrient bioavailability. These approaches may lead to better strategies for altering the location of calcium …

Assembly Of The Didymium Iridis Mitochondrial Genome By Genome Walking, Dale Kopp

College of Science and Health Theses and Dissertations

Organelle inheritance and RNA editing has been studied in Didymium iridis even though the genome has not been completely sequenced. Four segments, comprising 66 kb, have been sequenced in the past. Several approaches have been taken to complete the sequence including restriction mapping and southern hybridization, as well as screening clone banks by PCR with the sequence of contig ends. In this study, genome walking was used to uncover sequences connecting the four segments. Using genome walking, approximately 4,113 bp of new sequence was identified. With the new sequence and the characterization of two previously sequenced D. iridis mt regions …

Morphological Correlates Of A Combat Performance Trait In The Forked Fungus Beetle, Bolitotherus Cornutus, K. M. Benowitz, E. D. Brodie Iii, Vincent A. Formica

Biology Faculty Works

Combat traits are thought to have arisen due to intense male-male competition for access to females. While large and elaborate weapons used in attacking other males have often been the focus of sexual selection studies, defensive traits (both morphological and performance) have received less attention. However, if defensive traits help males restrict access to females, their role in the process of sexual selection could also be important. Here we examine the morphological correlates of grip strength, a defensive combat trait involved in mate guarding, in the tenebrionid beetle Bolitotherus cornutus. We found that grip strength was repeatable and differed between …

Antony Van Leeuwenhoek: Creation “Magnified” Through His Magnificent Microscopes, Alan L. Gillen, Douglas Oliver

Faculty Publications and Presentations

Although van Leeuwenhoek was not the inventor of the microscope, he advanced it more than anyone else for seeing living things.

Antony van Leeuwenhoek1 (Fig. 1) found great joy in God’s smallest creatures. He first discovered protozoans in his youth. The Dutch haberdasher retained a child-like joy of discovery from his youth until his death at age 90. He lived to see tiny microbes though his homemade microscopes. He loved to grind and focus a new lens in order to see the unseen world. Leeuwenhoek spent countless hours grinding tiny lenses and looking through them. This Christian lay biologist …

A Ranksum Statistics Based Framework To Decipher Transcription Regulation, Iuan-Bor Chen

Arts & Sciences Graduate Student Theses and Dissertations

The unbiased generation of specific and meaningful hypotheses from the deluge of data generated by modern genomic methods remains a challenge. These datasets require increasing level of expertise to analyze fully, and are often underutilized even in the originating lab. It would be desirable to have a computational strategy that is easy to implement, robust against outliers and missing data, and broadly applicable to diverse experimental designs. In this dissertation, I present a set of ranksum statistics-based analytical methods as a framework to extract testable hypotheses from large and complex datasets. To illustrate its utility, this framework was applied to …

Bone Morphogenetic Protein Signaling In Vascular Disease: Anti-Inflammatory Action Through Myocardin-Related Transcription Factor A, Dahai Wang, Jamunabai Prakash, Peter H. Nguyen, Brandi N. Davis-Dusenbery, Nicholas S. Hill, Matthew D. Layne, Akiko Hata, Giorgio Lagna

Biology

Pulmonary artery hypertension (PAH) patients exhibit elevated levels of inflammatory cytokines and infiltration of inflammatory cells in the lung. Concurrently, mutations of bmpr2, the gene encoding the type II receptor of bone morphogenetic proteins (BMP), are found in ∼75% of patients with familial PAH, but a possible nexus between increased inflammation and diminished BMP signaling has hitherto remained elusive. We previously showed that BMP4 triggers nuclear localization of the Myocardin-related transcription factor A (MRTF-A) in human pulmonary artery smooth muscle cells (PASMC), resulting in the induction of contractile proteins. Here we report the BMPR2-dependent repression of a set of inflammatory …

Analyses Of Chromosome Copy Number And Expression Level Of Four Genes In The Ciliate Chilodonella Uncinata Reveal A Complex Pattern That Suggests Epigenetic Regulation, Laure Bellec, Laura A. Katz

Biological Sciences: Faculty Publications

Chilodonella uncinata, like all ciliates, contains two distinct nuclei in every cell: a germline micronucleus and a somatic macronucleus. The macronucleus develops from the zygotic nucleus through a series of chromosomal rearrangements. Macronuclear development in C. uncinata yields a nucleus with highly amplified gene-sized chromosomes. The macronucleus is transcriptionally active during vegetative growth while there is no expression in the micronucleus except during a brief period following conjugation. Gene family evolution in ciliates occurs through complex processes including gene duplication and an alternative processing of scrambled genes. Here we use quantitative PCR to compare relative expression levels of eight genes …

Methylene Blue Modulates Huntingtin Aggregation Intermediates And Is Protective In Huntington's Disease Models, Emily M. Sontag, Gregor P. Lotz, Namita Agrawal, Andrew Tran, Rebecca Aron, Guocheng Yang, Mihaela Necula, Alice Lau, Steven Finkbeiner, Charles G. Glabe, J. Lawrence Marsh, Paul J. Muchowski, Leslie M. Thompson

Biological Sciences Faculty Research and Publications

Huntington's disease (HD) is a devastating neurodegenerative disorder with no disease-modifying treatments available. The disease is caused by expansion of a CAG trinucleotide repeat and manifests with progressive motor abnormalities, psychiatric symptoms, and cognitive decline. Expression of an expanded polyglutamine repeat within the Huntingtin (Htt) protein impacts numerous cellular processes, including protein folding and clearance. A hallmark of the disease is the progressive formation of inclusions that represent the culmination of a complex aggregation process. Methylene blue (MB), has been shown to modulate aggregation of amyloidogenic disease proteins. We investigated whether MB could impact mutant Htt-mediated aggregation and neurotoxicity. MB …

Transient Expression Of Ova Antigen: Rtb Fusions In Plants For Production Of Improved Subunit Vaccines, Lana Elkins

Student Theses and Dissertations

Plant-based production systems may provide a solution to the safety, cost, and scalability limitations of traditional vaccine production. While subunit vaccines offer several advantages, challenges of low immunogenicity need to be addressed. The nontoxic B subunit of ricin (RTB) may provide a novel platform for effective delivery and immune presentation for subunit vaccines. The RTB lectin binds sugars on the surface of mammalian cells to facilitate uptake/transport of fused antigen. The natural cell trafficking of RTB may allow differential presentation to the two major arms of the animal immune system, antibody- and cell-mediated using an RTB and RTBKDEL fusion vaccine …

Effects Of Invasion By The Common Reed (Phragmites Australis) On Carbon Transformations In A Great Lakes Marsh, Shawn Trevor Duke

Master's Theses and Doctoral Dissertations

The common reed (Phragmites australis) is a highly productive invasive grass that alters the wetland physiochemical environment and produces toxic secondary metabolites. Plant litter decomposition, effects of water level on soil microbes, and soil microbial response to leachate additions were investigated in Phragmites invaded and pre-invaded Typha sites. Less litter mass was lost from Phragmites than Typha in both sites during the initial 144 days. Annual mass loss from both species’ litter was greater in the Phragmites site. Lower water levels resulted in greater CO₂ than CH₄ production in both Phragmites and Typha soils. Higher water …