Digital Commons Network^™

Walking Behavior Of Zoo Elephants: Associations Between Gps-Measured Daily Walking Distances And Environmental Factors, Social Factors, And Welfare Indicators, Matthew Robert Holdgate, Cheryl L. Meehan, Jennifer N. Hogan, Lance J. Miller, Josesph Soltis, Jeff Andrews, David J. Shepherdson

Biology Faculty Publications and Presentations

Research with humans and other animals suggests that walking benefits physical health. Perhaps because these links have been demonstrated in other species, it has been suggested that walking is important to elephant welfare, and that zoo elephant exhibits should be designed to allow for more walking. Our study is the first to address this suggestion empirically by measuring the mean daily walking distance of elephants in North American zoos, determining the factors that are associated with variations in walking distance, and testing for associations between walking and welfare indicators. We used anklets equipped with GPS data loggers to measure outdoor …

Recumbence Behavior In Zoo Elephants: Determination Of Patterns And Frequency Of Recumbent Rest And Associated Environmental And Social Factors, Matthew Robert Holdgate, Cheryl L. Meehan, Jennifer N. Hogan, Lance J. Miller, Jeff Rushen, Anne-Marie De Passillé, Josesph Soltis, Jeff Andrews, David J. Shepherdson

Biology Faculty Publications and Presentations

Resting behaviors are an essential component of animal welfare but have received little attention in zoological research. African savanna elephant (Loxodonta africana) and Asian elephant (Elephas maximus) rest includes recumbent postures, but no large-scale investigation of African and Asian zoo elephant recumbence has been previously conducted. We used anklets equipped with accelerometers to measure recumbence in 72 adult female African (n = 44) and Asian (n = 28)elephants housed in 40 North American zoos. We collected 344 days of data and determined associations between recumbence and social, housing, management, and demographic factors. African elephants were recumbent less (2.1 hours/day, S.D. …

The Maintenance Of Phenotypic Divergence Through Sexual Selection: An Experimental Study In Barn Swallows Hirundo Rustica, Rebecca Safran, Yoni Vortman, Brittany R. Jenkins, Joanna K. Hubbard, Matt Wilkins, Rachel J. Bradley, Arnon Lotem

School of Biological Sciences: Faculty Publications

Previous studies have shown that sexual signals can rapidly diverge among closely related species. However, we lack experimental studies to demonstrate that differences in trait-associated reproductive performance maintain sexual trait differences between closely related populations, in support for a role of sexual selection in speciation. Populations of Northern Hemisphere distributed barn swallows Hirundo rustica are closely related, yet differ in two plumage-based traits: ventral color and length of the outermost tail feathers (streamers). Here we provide experimental evidence that manipulations of these traits result in different reproductive consequences in two subspecies of barn swallow: (H. r. erythrogaster in North …

Proximate And Evolutionary Causes Of Sexual Size Dimorphism In The Crab Spider Mecaphesa Celer, Marie Claire Chelini

School of Biological Sciences: Dissertations, Theses, and Student Research

Animal species’ body sizes result from the balance between selection for survival and selection for reproduction. In species with sexual size dimorphism (SSD), this balance differs between females and males, resulting in distinct sizes despite similar constraints. I used an integrative approach to understand how sexual section, and differences in developmental trajectories and metabolic physiology, resulted in the female biased SSD of the crab spider Mecaphesa celer (Thomisidae). SSD in spiders is often assumed to be a consequence of selection for early male maturation, which should provide males with additional mating opportunities. My results allow us to discard mate …

Why We Should Not Postpone Awareness Of Wild Animal Suffering, Catia Faria

Animal Sentience

Ng (2016) restates his case for the importance of wild animal suffering (1995). Nevertheless, he suggests that the most effective way to reduce nonhuman suffering overall is to give short-term priority to the suffering of farmed animals. It is not clear that Ng puts forward a successful case. Our current efforts to prevent animal suffering overall should also include raising awareness of wild animal suffering now as well as promoting research on safe and feasible ways to prevent wild animal suffering in the future.

Divergent Activity Of The Gonadotropin Releasing Hormone Receptor Gene Promoter Among Genetic Lines Of Pigs Is Partially Conferred By Nuclear Factor (Nf)-Kb, Specificity Protein (Sp)1-Like And Gata-4 Binding Sites, Emily A. Mcdonald, Jacqueline E. Smith, Rebecca A. Cederberg, Brett R. White

Department of Animal Science: Faculty Publications

BACKGROUND: Binding of gonadotropin-releasing hormone (GnRH) to its receptor (GnRHR) on gonadotropes within the anterior pituitary gland is essential to reproduction. In pigs, the GnRHR gene is also located near a genetic marker for ovulation rate, a primary determinant of prolificacy. We hypothesized that pituitary expression of the GnRHR gene is alternatively regulated in genetic strains with elevated ovulation rates (Chinese Meishan and Nebraska Index) vs. standard white crossbred swine (Control).

METHODS: Luciferase reporter vectors containing 5118 bp of GnRHR gene promoter from either the Control, Index or Meishan swine lines were generated. Transient transfection of line-specific, full length, deletion …

Diversity And Distribution Of Diatom Endosymbionts In Amphistegina Spp. (Foraminifera) Based On Molecular And Morphological Techniques, Kwasi H. Barnes

USF Tampa Graduate Theses and Dissertations

Diatoms associated with foraminifers of the genus Amphistegina were assessed using a combination of morphological and molecular techniques. These included: 1) microscopic identification of diatoms cultured from the host, 2) sequencing of portions of the small subunit of the ribosomal RNA gene (18S) and the large subunit of the ribulose-1,5-bisphosphate carboxylase/oxygenase [i.e., RubisCO] gene (rbcL) from DNA extracted directly from the Amphistegina hosts and also from diatoms cultured from these hosts, and 3) denaturing gradient gel electrophoresis (DGGE) profiles of rbcL and internal transcribed spacer 1 (ITS1) PCR amplicons from DNA extracted directly from …

Scorpions Of The Horn Of Africa (Arachnida, Scorpiones). Part V. Two New Species Of Neobuthus Hirst, 1911 (Buthidae), From Ethiopia And Eritrea, Graeme Lowe, František Kovařík

Euscorpius

New information about the taxonomy and distribution of the genus Neobuthus Hirst, 1911 (Scorpiones: Buthidae) is presented, based on materials recently collected from Ethiopia and Eritrea. Emended diagnoses are provided for the genus Neobuthus, and for the species N. awashensis Kovařík et Lowe, 2012 and N. cloudsleythompsoni Lourenço, 2001. New records are given for N. awashensis in Ethiopia. We redescribe N. cloudsleythompsoni, and we describe two additional new species: N. eritreaensis sp. n. (the first record of the genus from Eritrea) and N. kutcheri sp. n. (southern Ethiopia, Somali State). We include a key …

Changes In Canyon Wren Vocalizations In Advance Of The Breeding Season, Anne Rose

Ursidae: The Undergraduate Research Journal at the University of Northern Colorado

Many animals adjust their signaling patterns throughout the year. Birds may use different signals as they increase association with mates and expend more energy in territory defense. Song is typically associated with territorial defense and pair bonding between mates, while calls often relate to maintaining contact between foraging birds. We studied variations in vocal behavior in canyon wrens (Catherpes mexicanus) by recording a pair across the midwinter-early spring transition preceding nesting. Recordings were made at the same time weekly for ten weeks. Call rate decreased during this period, contrasting strongly with increasing song production. The occurrence of low …

Range-Wide Patterns Of Geographic Variation In Songs Of Golden-Crowned Sparrows (Zonotrichia Atricapilla), Daizaburo Shizuka, Glen Chilton, M Ross Lein

Papers in Behavior in Biological Sciences

Discrete geographic variation, or dialects, in songs of songbirds arise as a consequence of complex interactions between ecology and song learning. Four of the five species of Zonotrichia sparrows, including the model species White-crowned Sparrow (Z. leucophrys), have been studied with respect to the causes and consequences of geographic variation in song. Within White-crowned Sparrows, subspecies that migrate farther have larger range size of dialects. Here, we assessed geographic patterns of song variation in the fifth species of this genus, the Golden-crowned Sparrow (Z. atricapilla). We analyzed field-recorded songs from 2 sampling periods (1996–1998 and 2006–2013) covering most of its …

Range-Wide Patterns Of Geographic Variation In Songs Of Golden-Crowned Sparrows (Zonotrichia Atricapilla), Daizaburo Shizuka, M Ross Lein, Glen Chilton

School of Biological Sciences: Faculty Publications

Discrete geographic variation, or dialects, in songs of songbirds arise as a consequence of complex interactions between ecology and song learning. Four of the five species of Zonotrichia sparrows, including the model species White-crowned Sparrow (Z. leucophrys), have been studied with respect to the causes and consequences of geographic variation in song. Within White-crowned Sparrows, subspecies that migrate farther have larger range size of dialects. Here, we assessed geographic patterns of song variation in the fifth species of this genus, the Golden-crowned Sparrow (Z. atricapilla). We analyzed field-recorded songs from 2 sampling periods (1996–1998 and 2006–2013) …

Alcohol Discrimination And Preferences In Two Species Of Nectar-Feeding Primate, Samuel R. Gochman, Michael B. Brown, Nathaniel J. Dominy

Dartmouth Scholarship

Recent reports suggest that dietary ethanol, or alcohol, is a supplemental source of calories for some primates. For example, slow lorises (Nycticebus coucang) consume fermented nectars with a mean alcohol concentration of 0.6% (range: 0.0–3.8%). A similar behaviour is hypothesized for aye-ayes (Daubentonia madagascariensis) based on a single point mutation (A294V) in the gene that encodes alcohol dehydrogenase class IV (ADH4), the first enzyme to catabolize alcohol during digestion. The mutation increases catalytic efficiency 40-fold and may confer a selective advantage to aye-ayes that consume the nectar of Ravenala madagascariensis. It is uncertain, however, whether alcohol exists in this nectar …

The North American Grouse: Their Biology And Behavior, Paul A. Johnsgard

Zea E-Books Collection

The ten currently recognized species of grouse in North America have played an important role in America’s history, from the famous but ill-fated heath hen, a primary source of meat for the earliest New England immigrants, to the ruffed grouse, currently one of the most abundant and soughtafter upland game birds in more than 40 states and provinces. This book summarizes the ecology, reproductive biology, and social behavior of all ten of the extant North American grouse species. It also describes the current status of grouse populations, some of which are perilously close to extinction. The social behavior of grouse …

Description Of Mesocriconema Ericaceum N. Sp. (Nematoda: Criconematidae) And Notes On Other Nematode Species Discovered In An Ericaceous Heath Bald Community In Great Smoky Mountains National Park, Usa, Thomas O. Powers, Peter Mullin, Rebecca Higgins, Timothy Harris, Kirsten S. Powers

Department of Plant Pathology: Faculty Publications

A new species of Mesocriconema and a unique assemblage of plant-parasitic nematodes was discovered in a heath bald atop Brushy Mountain in Great Smoky Mountains National Park. Mesocriconema ericaceum n. sp., a species with males, superficially resembles M. xenoplax. DNA barcoding with the mitochondrial COI gene provided evidence of the new species as a distinct lineage. SEM revealed significant variability in arrangement of labial submedian lobes, plates, and anterior and posterior annuli. Three other nematodes in the family Criconematidae were characterized from the heath bald. Ogma seymouri, when analyzed by statistical parsimony, established connections with isolates from north-eastern Atlantic …

Temperature-Dependent Pathogenicity Of Grouper Iridovirus Of Taiwan (Tgiv), Hsin-I Liu, Ying-Chu Lin, Pinwen Peter Chiou, Hsin-Yiu Chou

Journal of Marine Science and Technology–Taiwan

Grouper iridovirus of Taiwan (TGIV) is one of the most devastating infectious pathogens of grouper fry in Taiwan. As environmental temperature often plays an important role in the outbreak of diseases, we assayed the impact of different temperatures (18, 25 and 32℃) on TGIV infection both in vitro and in vivo. Cytopathic effect (CPE) characterized as cell rounding and lysis were observed in TGIV-infected grouper SB (swim bladder) cells at 25℃ and 32℃, but was absent at 18℃. With temperature rising to 32℃, the presence of pycnotic nuclei and chromatin margination became prominent in the infected cells, indicating an apoptotic …

Molecular Tracking Of Individual Host Use In The Shiny Cowbird – A Generalist Brood Parasite, Ma Alicia De La Colina, Mark E. Hauber, Bill M. Strausberger, Juan Carlos Reboreda, Bettina Mahler

Publications and Research

Generalist parasites exploit multiple host species at the population level, but the individual parasite’s strategy may be either itself a generalist or a specialist pattern of host species use. Here, we studied the relationship between host availability and host use in the individual parasitism patterns of the Shiny Cowbird Molothrus bonariensis, a generalist avian obligate brood parasite that parasitizes an extreme range of hosts. Using five microsatellite markers and an 1120-bp fragment of the mtDNA control region, we reconstructed full-sibling groups from 359 cowbird eggs and chicks found in nests of the two most frequent hosts in our study area, …

Slides: The Era Of River Anthropology: Social And Eco-Hydrological Science Connections And Capacity For Environmental Flows: Us Case Studies, Joseph E. Flotemersch, Lisa-Perras Gordon

Coping with Water Scarcity in River Basins Worldwide: Lessons Learned from Shared Experiences (Martz Summer Conference, June 9-10)

Presenter: Joe Flotemersch, US Environmental Protection Agency (EPA), Office of Research and Development

21 slides

Slides: The Columbia River Basin, Barbara Cosens

Coping with Water Scarcity in River Basins Worldwide: Lessons Learned from Shared Experiences (Martz Summer Conference, June 9-10)

Presenter: Barbara Cosens, Professor and Associate Dean of Faculty, University of Idaho College of Law, Waters of the West Interdisciplinary Program

16 slides

Agenda: Coping With Water Scarcity In River Basins Worldwide: Lessons Learned From Shared Experiences, University Of Colorado Boulder. Getches-Wilkinson Center For Natural Resources, Energy, And The Environment

Coping with Water Scarcity in River Basins Worldwide: Lessons Learned from Shared Experiences (Martz Summer Conference, June 9-10)

Water scarcity is increasingly dominating headlines throughout the world. In the southwestern USA, the looming water shortages on the Colorado River system and the unprecedented drought in California are garnering the greatest attention. Similar stories of scarcity and crisis can be found across the globe, suggesting an opportunity for sharing lessons and innovations. For example, the Colorado River and Australia's Murray-Darling Basin likely can share many lessons, as both systems were over-allocated, feature multiple jurisdictions, face similar climatic risks and drought stresses, and struggle to balance human demands with environmental needs. In this conference we cast our net broadly, exploring …

Slides: Rivers And People In The Neotropics: Social And Ecological Science For Environmental Flows, Elizabeth P. Anderson

Coping with Water Scarcity in River Basins Worldwide: Lessons Learned from Shared Experiences (Martz Summer Conference, June 9-10)

Presenter: Elizabeth P. Anderson, Florida International University

38 slides

Slides: Food For Thought: Water Requirements For Social-Ecological Systems, Michael Douglas, Sue Jackson

Coping with Water Scarcity in River Basins Worldwide: Lessons Learned from Shared Experiences (Martz Summer Conference, June 9-10)

Presenters:

Michael Douglas, University of Western Australia, Charles Darwin University

Sue Jackson, Griffith University

35 slides

Agenda: Indigenous Water Justice Symposium, University Of Colorado Boulder. Getches-Wilkinson Center For Natural Resources, Energy, And The Environment

Indigenous Water Justice Symposium (June 6)

Indigenous peoples throughout the world face diverse and often formidable challenges of what might be termed “water justice.” On one hand, these challenges involve issues of distributional justice that concern Indigenous communities’ relative abilities to access and use water for self-determined purposes. On the other hand, issues of procedural justice are frequently associated with water allocation and management, encompassing fundamental matters like representation within governance entities and participation in decision-making processes. Yet another realm of water justice in which disputes are commonplace relates to the persistence of, and respect afforded to, Indigenous communities’ cultural traditions and values surrounding water—more specifically, …

Cooled Perch Effects On Performance And Well-Being Traits In Caged White Leghorn Hens, J Y. Hu, P Y. Hester, M M. Makagon, G Vezzoli, R S. Gates, Y Xiong, H W. Cheng

Department of Animal Science: Faculty Publications

We assessed the effects of chilled water cooling perches on hen performance and physiological and behavioral parameters under “natural” high temperatures during the 2013 summer with a 4-hour acute heating episode. White Leghorns at 16 wk of age (N = 162) were randomly assigned to 18 cages (n = 9) arranged into 3 units. Each unit was assigned to one of the 3 treatments through 32 wk of age: 1) cooled perches, 2) air perches, and 3) no perches. Chilled water (10◦C) was circulated through the cooled perches when cage ambient temperature exceeded 25^◦C. At the age of …

Finding The Beat: From Socially Coordinated Vocalizations In Songbirds To Rhythmic Entrainment In Humans, Jonathan I. Benichov, Eitan Globerson, Ofer Tchernichovski

Publications and Research

Humans and oscine songbirds share the rare capacity for vocal learning. Songbirds have the ability to acquire songs and calls of various rhythms through imitation. In several species, birds can even coordinate the timing of their vocalizations with other individuals in duets that are synchronized with millisecond-accuracy. It is not known, however, if songbirds can perceive rhythms holistically nor if they are capable of spontaneous entrainment to complex rhythms, in a manner similar to humans. Here we review emerging evidence from studies of rhythm generation and vocal coordination across songbirds and humans. In particular, recently developed experimental methods have revealed …

Nesting Ecology Of The Northern Beardless-Tyrannulet (Camptostoma Imberbe) In The Lower Rio Grande Valley Of Texas, Usa, Scott M. Werner, Sallie J. Hejl, Timothy Brush

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

During 2002–2003, we studied the breeding ecology of the Northern Beardless-Tyrannulet (Camptostoma imberbe), a poorly known and rare permanent resident in the Lower Rio Grande Valley of Texas, United States of America. We found 28 nests in clusters of Spanish moss (Tillandsia usneoides) or ball moss (T. recurvata), 93% of which were in cedar elm (Ulmus crassifolia) trees. Nest-building, incubation, and nestling periods averaged 7.0, 14.0, and 18.5 days, respectively. Of the 28 nests, 43% were successful, while 38% of the failed nests showed obvious signs of depredation. Nests were located in …

Ecosystem-Based Fisheries Management (Ebfm) Risk Assessment Of The Western Australian Silver-Lipped Pearl Oyster (Pinctada Maxima) Industry, K. L. Travaille, R. Jones, B Wise

WA Marine Stewardship Council report series

This report provides a comprehensive overview of the Western Australian silver-lipped pearling (Pinctada maxima) industry and the outcomes from the 2015 ecological risk assessment of this industry. The P. maxima pearling industry has been operating in Western Australia since the 1880s, initially harvesting pearl oysters for mother-of-pearl production.

Life In The Cold: An Investigation Of Polar Regions, Briar Bragdon, Ashley Breault, Bailey Bush, Jennifer Gamble, Rebecca Hudak, Emily Johnston, Kaitlyn Kennedy, Alexandria Makucewicz, Sharlene Maynard, Erin Mohr, Gwen Pelletier, Halie Pruitt, Abigail Rhodes, Peter Swan, Markus Frederich

Marine Sciences Student Projects

Polar areas provide unique environments that, though they may seem extreme and uninhabitable, are flourishing with life. These areas around the North and South poles include deep oceans, shallow shelf regions, tundra, mountain ranges and vast glaciers. With the increasing effects of global climate change, a basic knowledge of polar regions is crucial to understand future impacts and implications. The purpose of this book is to give a broad background of polar biology, and also provide details on specific examples through case studies. Topics included throughout this book are: Ice, Life in Polar Regions, Species Interactions, and Anthropogenic Impacts.

The …

Why Come Back Home? Investigating The Proximate Factors That Influence Natal Philopatry In Migratory Passerines, Jenna A. Cava, Noah G. Perlut, Steven E. Travis

Environmental Studies Faculty Publications

Knowledge of which cues attract birds back to natal areas is important for conservation because the cues could be manipulated to attract breeders to source habitat or discourage breeders from settling in sink habitat. We examined the influence of intrinsic and extrinsic variables on natal philopatry using two metrics, short-distance natal dispersal and the probability of philopatry to the natal field, in two obligate-grassland bird species breeding in an agricultural landscape: the bobolink, Dolichonyx oryzivorus, and the Savannah sparrow, Passerculus sandwichensis. During 2002–2014, we detected 90 locally hatched Savannah sparrows and 129 locally hatched bobolinks breeding as adults …

Mid West Aquaculture Development Zone, Department Of Fisheries

Fisheries Occasional Publications

PUBLIC ENVIRONMENTAL REVIEW

Design Of An Aquaponics System, Jesse Birsinger

BioResource and Agricultural Engineering

This Senior Project discusses the design, cost analysis, and evaluation of an aquaponics system. The system incorporates aquaculture and hydroponics to create a source of fish protein and various crops. The system was sized based off a minimum requirement of pounds of fish available per week. The system designed is capable of generating 2080 pounds of catfish, and 16,000 pounds of produce annually. The first year of operation the system will operate at a loss due to the significant cost of the components of the system, however, the project is projected to generate a minimum stream of revenue of $10,600 …